View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5838-Insertion-4 (Length: 563)

Name: NF5838-Insertion-4
Description: NF5838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5838-Insertion-4
NF5838-Insertion-4
[»] chr6 (18 HSPs)
chr6 (8-452)||(31109508-31109941)
chr6 (460-540)||(31109245-31109325)
chr6 (460-546)||(9698350-9698436)
chr6 (460-546)||(21279926-21280012)
chr6 (463-546)||(13743238-13743321)
chr6 (463-546)||(13748738-13748821)
chr6 (463-546)||(30014343-30014426)
chr6 (460-546)||(21293694-21293780)
chr6 (462-546)||(3213399-3213483)
chr6 (463-546)||(33253913-33253996)
chr6 (465-546)||(27441544-27441625)
chr6 (462-546)||(7292746-7292830)
chr6 (462-546)||(7367548-7367632)
chr6 (462-546)||(26670026-26670110)
chr6 (462-546)||(33242402-33242486)
chr6 (15-44)||(31080096-31080125)
chr6 (462-546)||(7273352-7273436)
chr6 (462-546)||(26466798-26466882)
[»] chr4 (26 HSPs)
chr4 (463-546)||(55272393-55272476)
chr4 (462-545)||(28988472-28988555)
chr4 (461-546)||(32728355-32728440)
chr4 (462-546)||(711959-712043)
chr4 (463-546)||(17619169-17619252)
chr4 (462-543)||(960890-960971)
chr4 (465-546)||(35037007-35037088)
chr4 (462-546)||(1771283-1771367)
chr4 (462-546)||(27864563-27864647)
chr4 (462-546)||(55966363-55966447)
chr4 (465-546)||(3756263-3756344)
chr4 (465-546)||(27893859-27893940)
chr4 (465-546)||(38851515-38851596)
chr4 (461-546)||(48463467-48463552)
chr4 (462-517)||(46827752-46827807)
chr4 (464-546)||(41878407-41878489)
chr4 (460-546)||(48435596-48435682)
chr4 (461-543)||(49229684-49229766)
chr4 (465-546)||(43735744-43735825)
chr4 (463-543)||(27550309-27550389)
chr4 (462-546)||(33703140-33703224)
chr4 (463-546)||(35017733-35017815)
chr4 (465-546)||(31680904-31680985)
chr4 (465-546)||(43514703-43514784)
chr4 (463-543)||(12496956-12497036)
chr4 (462-546)||(25051692-25051776)
[»] chr5 (12 HSPs)
chr5 (462-546)||(7617132-7617216)
chr5 (462-546)||(38470578-38470662)
chr5 (460-546)||(17208071-17208157)
chr5 (463-546)||(2614666-2614749)
chr5 (463-546)||(22512305-22512388)
chr5 (463-546)||(32473411-32473494)
chr5 (463-546)||(41334680-41334763)
chr5 (465-546)||(5256997-5257078)
chr5 (462-546)||(18033981-18034065)
chr5 (462-546)||(30622736-30622819)
chr5 (462-546)||(33801468-33801552)
chr5 (463-515)||(33855091-33855143)
[»] chr1 (21 HSPs)
chr1 (461-546)||(45705823-45705908)
chr1 (463-546)||(48119628-48119711)
chr1 (462-546)||(44112676-44112760)
chr1 (462-546)||(45639749-45639833)
chr1 (463-546)||(35003294-35003377)
chr1 (463-546)||(46168383-46168466)
chr1 (460-545)||(750323-750408)
chr1 (462-546)||(5489775-5489859)
chr1 (463-546)||(38335918-38336001)
chr1 (462-544)||(26585461-26585543)
chr1 (461-546)||(38113212-38113297)
chr1 (461-546)||(41065151-41065236)
chr1 (463-546)||(37814778-37814861)
chr1 (463-546)||(43571103-43571186)
chr1 (460-546)||(45427762-45427848)
chr1 (465-546)||(2497579-2497660)
chr1 (465-546)||(7447828-7447908)
chr1 (462-546)||(48498979-48499063)
chr1 (462-517)||(14427346-14427401)
chr1 (463-546)||(35000130-35000213)
chr1 (462-546)||(23989540-23989625)
[»] chr8 (18 HSPs)
chr8 (462-546)||(34304787-34304871)
chr8 (461-546)||(18066735-18066820)
chr8 (462-546)||(35181515-35181599)
chr8 (465-546)||(26125637-26125718)
chr8 (462-546)||(36743500-36743584)
chr8 (463-546)||(11582766-11582849)
chr8 (463-546)||(29705362-29705445)
chr8 (460-546)||(16603643-16603729)
chr8 (460-546)||(29800967-29801053)
chr8 (460-546)||(20148757-20148843)
chr8 (460-546)||(31384661-31384747)
chr8 (462-543)||(30660762-30660843)
chr8 (462-546)||(5754902-5754986)
chr8 (464-546)||(16358850-16358933)
chr8 (460-546)||(2546993-2547079)
chr8 (462-496)||(19386637-19386671)
chr8 (465-546)||(33630010-33630091)
chr8 (465-546)||(42295197-42295278)
[»] chr7 (22 HSPs)
chr7 (462-546)||(40236918-40237002)
chr7 (464-546)||(31408650-31408732)
chr7 (463-546)||(24001029-24001112)
chr7 (463-546)||(31513287-31513370)
chr7 (463-546)||(42538448-42538531)
chr7 (463-546)||(42972852-42972935)
chr7 (460-546)||(24280613-24280699)
chr7 (460-546)||(43317440-43317526)
chr7 (465-546)||(10573751-10573832)
chr7 (462-546)||(33384869-33384954)
chr7 (460-546)||(44326175-44326261)
chr7 (461-546)||(5194248-5194333)
chr7 (462-515)||(27535279-27535332)
chr7 (465-546)||(43343641-43343722)
chr7 (465-546)||(44416951-44417032)
chr7 (462-546)||(5015394-5015478)
chr7 (463-546)||(5810941-5811024)
chr7 (463-530)||(39998408-39998475)
chr7 (460-546)||(9216299-9216384)
chr7 (465-546)||(4638216-4638297)
chr7 (461-546)||(35069719-35069804)
chr7 (462-511)||(41861673-41861722)
[»] chr3 (20 HSPs)
chr3 (462-546)||(9434123-9434207)
chr3 (463-546)||(36150130-36150213)
chr3 (463-546)||(45126945-45127028)
chr3 (464-546)||(42394436-42394518)
chr3 (462-546)||(10457909-10457993)
chr3 (462-546)||(46941052-46941136)
chr3 (462-546)||(52627994-52628078)
chr3 (460-546)||(53581875-53581961)
chr3 (464-546)||(54237097-54237179)
chr3 (461-546)||(25996266-25996351)
chr3 (462-546)||(4190282-4190366)
chr3 (462-546)||(24688419-24688503)
chr3 (463-546)||(42100688-42100771)
chr3 (462-546)||(40808864-40808948)
chr3 (463-546)||(34791829-34791912)
chr3 (460-546)||(25413678-25413764)
chr3 (465-546)||(27748565-27748646)
chr3 (499-563)||(51249344-51249406)
chr3 (462-546)||(47191043-47191126)
chr3 (462-546)||(54246165-54246249)
[»] chr2 (23 HSPs)
chr2 (465-546)||(41281991-41282072)
chr2 (462-546)||(16803967-16804051)
chr2 (462-546)||(16843249-16843333)
chr2 (462-546)||(43114556-43114640)
chr2 (460-546)||(8896600-8896686)
chr2 (464-546)||(19047158-19047240)
chr2 (465-546)||(6518486-6518566)
chr2 (465-546)||(11825671-11825752)
chr2 (460-546)||(18491702-18491788)
chr2 (460-546)||(42026764-42026852)
chr2 (462-546)||(966851-966935)
chr2 (463-531)||(16096747-16096815)
chr2 (464-563)||(34817778-34817875)
chr2 (463-546)||(12415477-12415560)
chr2 (463-546)||(12427537-12427620)
chr2 (463-563)||(13780737-13780835)
chr2 (461-546)||(30838630-30838715)
chr2 (460-545)||(43490419-43490504)
chr2 (462-546)||(34895758-34895842)
chr2 (463-546)||(1750414-1750497)
chr2 (465-546)||(4299437-4299518)
chr2 (462-546)||(12302270-12302354)
chr2 (462-546)||(43335780-43335864)
[»] scaffold0038 (1 HSPs)
scaffold0038 (464-546)||(112656-112738)
[»] scaffold0003 (1 HSPs)
scaffold0003 (465-546)||(45736-45817)
[»] scaffold0385 (1 HSPs)
scaffold0385 (462-546)||(11250-11334)
[»] scaffold0119 (1 HSPs)
scaffold0119 (462-546)||(684-768)
[»] scaffold0100 (1 HSPs)
scaffold0100 (463-546)||(35473-35556)
[»] scaffold0157 (1 HSPs)
scaffold0157 (463-543)||(23441-23521)


Alignment Details
Target: chr6 (Bit Score: 243; Significance: 1e-134; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 8 - 452
Target Start/End: Complemental strand, 31109941 - 31109508
Alignment:
Q  8 atattggttggttctccaagaatctaatgttctgcttcnnnnnnnn------aactgaaactgttatttcatcgcttgttaagtaccatgctgatatgcc 101  Q
    |||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109941 atattggttggttctccaagaatctaatgttctgctttttttttttttttttaactgaaactgttatttcatcgcttgttaagtaccatgctgatatgcc 31109842  T
Q  102 gatatgcaagcacaagttgatacaagctgtaaattgtaatttgtactacnnnnnnnnnnnnnnnnnnnnnnnaaagttgagttcaatttactgggtagtc 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||                       ||||||||||||||||||||||||||||    
T  31109841 gatatgcaagcacaagttgatacaagctgtgaattgtaatttgtactacatatagatatagatatagatataaaagttgagttcaatttactgggtagtc 31109742  T
Q  202 atggaccattcagtcatatgaaaaatcgatgacatactctgttgttacagttgatgataagttcttttaagttgacaaaattacattttggatcatcaag 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109741 atggaccattcagtcatatgaaaaatcgatgacatactctgttgttacagttgatgataagttcttttaagttgacaaaattacattttggatcatcaag 31109642  T
Q  302 gtttaccttatgagtgacaaacttatttaa---aaattttggatcactgattttttcagcatattttaaaggttgtcaactgttaaatgtgtattccata 398  Q
    ||||||||||||||||||||||||||||||   | |||||||||||                    | ||||||||||||||||||||||||||||||||    
T  31109641 gtttaccttatgagtgacaaacttatttaaattacattttggatca--------------------tcaaggttgtcaactgttaaatgtgtattccata 31109562  T
Q  399 cctaaaactttattgtttgtcatggctaaaatattgctaaaatttcacatctta 452  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109561 cctaaaactttattgtttgtcatggctaaaatattgctaaaatttcacatctta 31109508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 460 - 540
Target Start/End: Complemental strand, 31109325 - 31109245
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattca 540  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  31109325 ataggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattca 31109245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 9698436 - 9698350
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  9698436 ataggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 9698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 21279926 - 21280012
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||| |||||| |  |||||||||||  ||| |||||| |  |||||||||||| ||||||||||||||    
T  21279926 ataggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcac 21280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 13743321 - 13743238
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| | |||| |||||||| | ||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 13748821 - 13748738
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| | |||| |||||||| | ||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 30014343 - 30014426
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || ||||| |||||||||| |||||| |  ||| |||||||| ||| ||||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcac 30014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 21293780 - 21293694
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| |||| |||||| ||||||||| || | ||||||||||| |  | |||||||||| ||||||||| ||||    
T  21293780 ataggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcac 21293694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 3213399 - 3213483
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||| |||||| ||||||||  |||| ||||||||||| |  | |||||||||| ||||||||| ||||    
T  3213399 aggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 3213483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 33253913 - 33253996
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| | |||||||| |||  | ||| |||||||||||||  ||||| || ||| ||||||||||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 33253996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 27441544 - 27441625
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| ||||||||||||||  | ||| |||| || ||| |  | |||||||||| ||||||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 27441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 7292746 - 7292830
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||| ||||| | |||| |||||||   |||||||||||| ||| |  |||||||||||| ||| ||||||||||    
T  7292746 aggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 7292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 7367548 - 7367632
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||| ||||||||| |||| |||||||   |||| |||| |||||| |  |||||||||||| ||| ||||||||||    
T  7367548 aggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 7367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 26670110 - 26670026
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || ||||   |||| |||||| |||| |  |||||||||||| ||| ||||||||||    
T  26670110 aggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 26670026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 33242402 - 33242486
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| | ||||||||||||    ||| ||||||||||| |  | ||| |||||| ||||||||||||||    
T  33242402 aggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcac 33242486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 31080125 - 31080096
Alignment:
Q  15 ttggttctccaagaatctaatgttctgctt 44  Q
    ||||||||||||||||||||||||||||||    
T  31080125 ttggttctccaagaatctaatgttctgctt 31080096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 7273436 - 7273352
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || ||||    ||| ||||||||||| |  || ||||||||| ||| ||||||||||    
T  7273436 aggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcac 7273352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 26466798 - 26466882
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||| |||||| || ||||  ||||| ||||| ||||| |  |||| ||||||| ||| ||||||||||    
T  26466798 aggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcac 26466882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 55272476 - 55272393
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||  | |||||||||| ||||||||||||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 55272393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 462 - 545
Target Start/End: Original strand, 28988472 - 28988555
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctca 545  Q
    |||||||||||||||||||| |||||| |||||||   |||| |||||||||||||| ||||| ||||||||||||||||||||    
T  28988472 aggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctca 28988555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 32728355 - 32728440
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||||||||||||||||||  | ||| |||||||||||||  | ||| |||||  ||||||||||||||    
T  32728355 taggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcac 32728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 711959 - 712043
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||  | ||| ||||||| |||||  | |||||||||| ||||||||||||||    
T  711959 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcac 712043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 17619252 - 17619169
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| | ||||||||||||  | ||| |||||||||||||  | |||||||||| ||||||||||||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 17619169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 960971 - 960890
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatct 543  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||||||| || ||  ||||| |||||| |||||||||||    
T  960971 aggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 35037007 - 35037088
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||| || ||||||| |||||| || ||| |||||||||||||  | |||||||||| ||||||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 35037088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 1771367 - 1771283
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || ||||  ||||| ||||||||||| |  || ||||||||||||| ||||||||||    
T  1771367 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcac 1771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 27864563 - 27864647
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||| | |||| |||||||| ||||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  27864563 aggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 27864647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 55966447 - 55966363
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||| |||||| |||||||| ||||| |||| |||||| |  |||||||||||| ||| ||||||||||    
T  55966447 aggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcac 55966363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 3756344 - 3756263
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| ||||||||||||||  | ||| |||||||||||||  | |||||||||  |||||| |||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcac 3756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 27893940 - 27893859
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||| |||| | |||| |||||||| ||||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 27893859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 38851515 - 38851596
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||||||||||||||||   | | ||||| |||||||  | ||| |||||||||||||||||||||    
T  38851515 aaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcac 38851596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 461 - 546
Target Start/End: Complemental strand, 48463552 - 48463467
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||| |||| | |||| ||||||||| |||| |||| |||||| |  |||||||||||| ||| ||||||||||    
T  48463552 taggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcac 48463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 46827807 - 46827752
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgca 517  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||||||| |||||    
T  46827807 aggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgca 46827752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 41878407 - 41878489
Alignment:
Q  464 gaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||  ||||| |||||||   |||| ||||||| || ||  |||||||||||||||| ||||||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcac 41878489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 48435682 - 48435596
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||| ||||||||||||| | |||||||| |||  | ||| |||||||||||||  ||||| || ||| ||||||||||||||    
T  48435682 ataggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 48435596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 543
Target Start/End: Complemental strand, 49229766 - 49229684
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatct 543  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| |||||  ||||||  | ||||||| || |||||||||||    
T  49229766 taggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 43735744 - 43735825
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||| |||||||||||||||||| || |||||  |||||||||  ||||| |  || ||||||||||||| ||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcac 43735825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 543
Target Start/End: Original strand, 27550309 - 27550389
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatct 543  Q
    ||||||||||||||||||| |||||| |  |||| |||||| |||||| |||| |  |||||||||||| ||| |||||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 27550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 33703140 - 33703224
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| |  |||||   ||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  33703140 aggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 33703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 35017733 - 35017815
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || || ||  |||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcac 35017815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 31680904 - 31680985
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||| | |||| | |||| |||||||||||||| |||||||| |  |  |||||||||||| ||| ||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcac 31680985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 43514784 - 43514703
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| |||||| || |||| |||||| |||||  |||| |  |||| ||||||| ||| ||||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcac 43514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 543
Target Start/End: Original strand, 12496956 - 12497036
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatct 543  Q
    ||||||||||| ||||||| |||||| || |||| |||||| |||| |||||| |  || ||||||||| ||| |||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 12497036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 25051692 - 25051776
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||| |||||||||  ||||| || ||||  ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  25051692 aggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcac 25051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 4e-21; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 7617132 - 7617216
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |  |||||||||||| ||| ||||||||||    
T  7617132 aggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcac 7617216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 38470578 - 38470662
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||| |||||| |||||||||||||| ||||||||||| |  | |||||||||| ||||||||| ||||    
T  38470578 aggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcac 38470662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 17208071 - 17208157
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||||| |||||||||||||| |  ||| |||||||||||||  | ||| |||||| ||||||||||||||    
T  17208071 ataggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcac 17208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 2614749 - 2614666
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 2614666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 22512305 - 22512388
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || |||| |||||| ||||| ||||| |  |||||||||||| ||| ||||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcac 22512388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 32473494 - 32473411
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| ||||||||||||||    ||| |||||| ||||||  |||||||||||| ||| ||||||||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcac 32473411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 41334763 - 41334680
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| |||||||   |||||||||||| ||| |  |||||||||||| ||| ||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 41334680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 5256997 - 5257078
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||| |||| | |||| |||||||| ||||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 5257078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 18033981 - 18034065
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || |||| |||||| ||||||| ||| |  |||||||||||  ||| ||||||||||    
T  18033981 aggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcac 18034065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 30622819 - 30622736
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||||||||||||||||  | ||| || | ||||||||  | |||||||||| |||||| |||||||    
T  30622819 aggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcac 30622736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 33801468 - 33801552
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||||||||| |  ||||  ||||| ||||| ||||| |  |||||||||||  ||| ||||||||||    
T  33801468 aggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcac 33801552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 33855143 - 33855091
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatg 515  Q
    ||||||||||||||||||| |||||| || ||||  ||||| |||||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatg 33855091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 45705823 - 45705908
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||| ||||| |||||||  | ||| |||||||||||||||||||||    
T  45705823 taggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcac 45705908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 48119628 - 48119711
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| ||||||||||||||  | ||| |||||||||||||  | |||||||||| ||||||||||||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 48119711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 44112676 - 44112760
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||  | ||| |||||||||||||  ||||| |||||| ||| ||||||||||    
T  44112676 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 44112760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 45639833 - 45639749
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||  |||||||||||||| | ||| |||||||||| ||  | |||||||||| ||||||||||||||    
T  45639833 aggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcac 45639749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 35003294 - 35003377
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| ||||||||||||||  | ||| |||||||||| ||  | |||||||||| ||||||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcac 35003377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 46168383 - 46168466
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||||||||| || | ||| ||||||| |||||  | |||||||||| ||||||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcac 46168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 750408 - 750323
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctca 545  Q
    ||||||||||||||| |||||| ||||   || ||||  ||||| ||||||||||| | |||||||||||||||||||||||||||    
T  750408 ataggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctca 750323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 5489775 - 5489859
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  5489775 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 5489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 38335918 - 38336001
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| ||||||||||||||    ||| |||| ||||||||  | |||||||||| ||||||||||||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcac 38336001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 26585461 - 26585543
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctc 544  Q
    |||||||||||| |||||||| ||||||||||||| |  ||| |||||||||||||  | |||||||||  ||||||||||||    
T  26585461 aggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctc 26585543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 461 - 546
Target Start/End: Complemental strand, 38113297 - 38113212
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||| ||||||| ||||||||||||||  | ||| |||||||||||||  |  || |||||| ||||||||||||||    
T  38113297 taggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcac 38113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 41065151 - 41065236
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||| ||||||||||||||  |  || |||||||||||||  ||||  |||||| ||| ||||||||||    
T  41065151 taggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcac 41065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 37814778 - 37814861
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||| |||| |||||| ||||||||  |||| ||||||||||| |  | |||||||||| ||||||||| ||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 37814861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 43571186 - 43571103
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || ||||   |||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43571103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 45427848 - 45427762
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| | | ||||||||||||  | ||| ||||| |||||||  ||||| |||||| ||| ||||||||||    
T  45427848 ataggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcac 45427762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 2497660 - 2497579
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||| |||| | |||| |||||||||||||| ||||||||||  |  | |||||||||| ||| ||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcac 2497579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 7447828 - 7447908
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||||| || ||||| ||||| ||||||| ||| |  |  ||||||||||||| ||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtacaccc-atgtattacagatattttgataagttcatctcac 7447908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 48499063 - 48498979
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||  ||||| |  |||| |||||| |||||| |||| |  |||||||||||| ||| ||||||||||    
T  48499063 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 48498979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 14427346 - 14427401
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgca 517  Q
    |||||||||||||||||||| ||||||||||||||  | ||| |||||| ||||||    
T  14427346 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgca 14427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 35000213 - 35000130
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| | |||||||||||| || ||| || ||  |||| |  ||||| ||||||||||||| |||||||    
T  35000213 ggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcac 35000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 23989625 - 23989540
Alignment:
Q  462 aggaaaatgttacatgaacatcc-tttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| || |||| ||||||| || ||| || |||| ||| |  |||||||||||| |||||| |||||||    
T  23989625 aggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcac 23989540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 34304787 - 34304871
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||||||||||||||||  | ||| |||||||||||||  ||||| |||||| ||| ||||||||||    
T  34304787 aggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 34304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 461 - 546
Target Start/End: Complemental strand, 18066820 - 18066735
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| |  |||||||||||  ||| ||||||||||    
T  18066820 taggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcac 18066735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 35181515 - 35181599
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||  | ||| |||||||||||||  ||||| |||||| ||| ||||||||||    
T  35181515 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 35181599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 26125637 - 26125718
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||| |||| |||||| |||||||||||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 26125718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 36743584 - 36743500
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  36743584 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 36743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 11582766 - 11582849
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 11582849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 29705362 - 29705445
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| |  ||||  ||||| ||||||||||| |  |||||||||||||||| ||||||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcac 29705445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 16603729 - 16603643
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||| ||| ||||||||||||||    |||||||||||||||||  |  || |||||| ||||||||||||||    
T  16603729 ataggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcac 16603643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 29801053 - 29800967
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||| |||||||||||| |||| | |||| |||||||| ||||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  29801053 atagaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 29800967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 20148757 - 20148843
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||| |||||||||||| |||| |||||| |||||||| ||||| |||||| |||  |  |||||||||||| ||| ||||||||||    
T  20148757 atagaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 20148843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 31384661 - 31384747
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||| | ||||||||||| |||||| || ||||||| ||| ||||||||||| |  ||| |||||||| ||| ||||||||||    
T  31384661 ataggaaagtattacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcac 31384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 30660843 - 30660762
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatct 543  Q
    |||||||||||||||||||| |||||| |  ||||| ||||| ||||||| ||| |  |||||||||||| ||| |||||||    
T  30660843 aggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 30660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 5754902 - 5754986
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| | |||| || ||||| ||||| |||| |||||  |  |||||||||||| ||| ||||||||||    
T  5754902 aggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcac 5754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 16358933 - 16358850
Alignment:
Q  464 gaaaatgttacat-gaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||| ||| | ||||||||||||||  | ||| |||| ||||||||  | | |||||||||||||||||||||||    
T  16358933 gaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcac 16358850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 2546993 - 2547079
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||||  ||||| |  |||| |||||| |||||| |||| |  |||||||||||  ||| ||||||||||    
T  2546993 ataggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcac 2547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 496
Target Start/End: Complemental strand, 19386671 - 19386637
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcataca 496  Q
    |||||||||||||||||||| ||||||||||||||    
T  19386671 aggaaaatgttacatgaacaccctttaatcataca 19386637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 33630091 - 33630010
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||| ||||| ||||||||||||||   |||| ||||||| |||||  ||||| |||||  ||| ||||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcac 33630010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 42295197 - 42295278
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| |||||| || ||||   |||| ||||| ||||| |  |||||||||||| ||| ||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcac 42295278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 9e-19; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 40236918 - 40237002
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||| | ||| |||||||||||||  ||||| |||||| ||| ||||||||||    
T  40236918 aggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcac 40237002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 31408732 - 31408650
Alignment:
Q  464 gaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||| |||||||||||||| || ||| |||| ||||||||  | |||||||||| ||||||||| ||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcac 31408650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 24001112 - 24001029
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 24001029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 31513287 - 31513370
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||  |||||||||||||  | ||| || ||||||||||  | |||||||||| ||||||||||||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcac 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 42538531 - 42538448
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 42538448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 42972852 - 42972935
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||| ||||||||||||| || |||| |||||| |||||| |||| |  |||||||||||| ||| ||||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 42972935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 24280699 - 24280613
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||||| |||||| |||||||  | ||| |||| ||||||||| ||  |||||||| ||||||||||||||    
T  24280699 ataggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcac 24280613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 43317440 - 43317526
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||| | |||| |||||||   |||| |||| || ||||   |||||||||||||||||||||||||||    
T  43317440 ataggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcac 43317526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 10573751 - 10573832
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||| |||| |||||| |||||||| | ||| ||||||||||| |  ||| |||||||| ||||||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcac 10573832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 33384869 - 33384954
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattcc-attatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||| ||||||||||||  || ||| || || |||||||  ||||| |||||| ||||||||||||||    
T  33384869 aggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcac 33384954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 44326175 - 44326261
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||| |||||||||||| |||| |||||| |||||||| ||||| |||||| |||  |  |||||||||||| ||| ||||||||||    
T  44326175 atagaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 44326261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 461 - 546
Target Start/End: Complemental strand, 5194333 - 5194248
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||| | |||| |||||||   |||| ||||||| |||    | |||||||||||||||||||||||||    
T  5194333 taggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcac 5194248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 27535332 - 27535279
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatg 515  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||||| |||||    
T  27535332 aggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatg 27535279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 43343722 - 43343641
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||| |  ||||  | ||| ||||||||||| |  |||||||||||||||| ||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 43343641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 44417032 - 44416951
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||| |  ||||  | ||| ||||||||||| |  |||||||||||||||| ||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 44416951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 5015394 - 5015478
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||  ||||| |  |||| |||||| |||||| |||| |  |||||||||||| ||| ||||||||||    
T  5015394 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 5015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 5811024 - 5810941
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||| || |||||| || ||||  ||||| ||||||| ||  |  |||||||||||||||| ||||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcac 5810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 530
Target Start/End: Original strand, 39998408 - 39998475
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatatttt 530  Q
    |||||||||||||||||||   ||||||||||||| | ||| ||||||||||| |  |||||||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 9216299 - 9216384
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||| |||||| || || || | ||| |||| ||||||||  || ||||||||| ||| ||||||||||    
T  9216299 ataggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctcac 9216384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 4638297 - 4638216
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| | |||| ||||||| || ||| ||||||||||  |  | |||||||||| ||| ||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcac 4638216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 35069719 - 35069804
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||  ||||| || ||||   |||| |||||| |||| |  |||||||||||| ||| ||||||||||    
T  35069719 taggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 35069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 41861673 - 41861722
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccc 511  Q
    |||||||||||||||||||| |||||| |||||||  | |||||||||||    
T  41861673 aggaaaatgttacatgaacaccctttattcatacacccaattatacaccc 41861722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 9e-19; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 9434123 - 9434207
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||||||||||| || ||| |||||||||||||  ||||| |||||| ||| ||||||||||    
T  9434123 aggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 9434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 36150130 - 36150213
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| | |||||| |||||||  ||||||||||||| ||| | ||||||||||||| ||| ||||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcac 36150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 45127028 - 45126945
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||| |||| |||||| |||||||| ||||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 45126945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 42394518 - 42394436
Alignment:
Q  464 gaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||| |||||| || ||||||||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 42394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 10457993 - 10457909
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| | ||||||||||||  | ||| |||||||||||||  | |||||||||| |||||| |||||||    
T  10457993 aggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcac 10457909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 46941052 - 46941136
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || |||||  |||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  46941052 aggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcac 46941136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 52628078 - 52627994
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||| |||||| ||||||||||||||| | ||| |||||| ||||||  | | |||||||| ||||||||||||||    
T  52628078 aggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcac 52627994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 53581961 - 53581875
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||| |||||||||||||||||  ||||| ||||||| |||||| |||| || ||| |  |||||||||||||||| ||||||||||    
T  53581961 atagaaaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcac 53581875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 54237097 - 54237179
Alignment:
Q  464 gaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||| |||||| || ||||| ||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 54237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 25996266 - 25996351
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||| |||||||||||||||   ||| ||||||||||  |  | ||| |||||| ||||||||||||||    
T  25996266 taggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcac 25996351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 4190366 - 4190282
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||  | ||| ||||||  ||| |  || ||||||||| ||||||||||||||    
T  4190366 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcac 4190282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 24688503 - 24688419
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| |  |||| |||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  24688503 aggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcac 24688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 42100688 - 42100771
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || ||||   |||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 42100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 40808864 - 40808948
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||| |||| | |||| || ||||  ||||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  40808864 aggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcac 40808948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 34791829 - 34791912
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| ||||||||||||||    ||| || ||| ||||||  ||||| ||||| |||| ||||||||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcac 34791912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 25413678 - 25413764
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||| |||||| || ||||  ||||| ||||||  ||| |  |||||||||||  ||| ||||||||||    
T  25413678 ataggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcac 25413764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 27748565 - 27748646
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| | |||| |||||||   |||||||||||  ||| |  |||||||||||| ||| ||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcac 27748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 563
Target Start/End: Original strand, 51249344 - 51249406
Alignment:
Q  499 ccattatacaccccatgcaccagggatattttgataaattcatctcactcgaccacactttctct 563  Q
    |||||||||||| ||||||  | |||||||||| |||||||||||||  | ||||||||||||||    
T  51249344 ccattatacacctcatgcattaaggatattttggtaaattcatctca--caaccacactttctct 51249406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 47191126 - 47191043
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || ||||   |||| |||| |||||| |  || ||||||||||||| ||||||||||    
T  47191126 aggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcac 47191043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 54246249 - 54246165
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || ||||  ||||| ||||||| ||| |  || ||||||||  ||| ||||||||||    
T  54246249 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcac 54246165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 41282072 - 41281991
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| ||||||||||||||  | ||| |||||||||||||  ||||| |||||||||| ||||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcac 41281991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 16803967 - 16804051
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||  | ||| |||| ||||||||  ||||| |||||||||| ||||||||||    
T  16803967 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16804051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 16843249 - 16843333
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||  | ||| |||| ||||||||  ||||| |||||||||| ||||||||||    
T  16843249 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 43114556 - 43114640
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||  | ||| |||||||||||||  ||||| |||||| ||| ||||||||||    
T  43114556 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 43114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 8896686 - 8896600
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||| ||||||||||||||||| |||||| ||| |||||||||| ||||||| || ||  ||| |||||||| ||||||||||||||    
T  8896686 atagaaaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcac 8896600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 19047158 - 19047240
Alignment:
Q  464 gaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||| |||||| || ||||||||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 19047240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 6518566 - 6518486
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| |||||||||||||| || ||| |||||||||||||  ||||| |||||| ||| ||||||||||    
T  6518566 aaaatgttacatgaaca-cctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 6518486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 11825752 - 11825671
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| ||||||||||||||  | ||| |||||||||||||  ||||| |||||| ||| ||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 11825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 18491702 - 18491788
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||| ||||||||||||||  | ||| |||||| ||||||  | | | |||||| ||||||||||||||    
T  18491702 ataggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcac 18491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 42026764 - 42026852
Alignment:
Q  460 ataggaaaatgttacatgaacatcc--tttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||||| ||  |||| |||||||||||||| |||| |||  |||  ||||||||||||  |||||||||||||    
T  42026764 ataggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcac 42026852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 966935 - 966851
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| ||||||||||||||  | ||| |||||||||||||  | | |  ||||| ||||||||||||||    
T  966935 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcac 966851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 531
Target Start/End: Original strand, 16096747 - 16096815
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttg 531  Q
    ||||||||||||||||||| |||||| || ||||  ||||||||||||||||| |  ||||||||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttg 16096815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 563
Target Start/End: Complemental strand, 34817875 - 34817778
Alignment:
Q  464 gaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcactcgaccacactttctct 563  Q
    |||||||||||||||||| |||||| ||| |||   |||| |||||||||||||| | | | |||||| |||||||||||||  | ||||||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctca--caaccacactttctct 34817778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 12415560 - 12415477
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| ||||||||||||||    ||| |||||||||||||  ||||| |||||| ||| || |||||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12415477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 12427620 - 12427537
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| ||||||||||||||    ||| |||||||||||||  ||||| |||||| ||| || |||||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 563
Target Start/End: Complemental strand, 13780835 - 13780737
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcactcgaccacactttctc 562  Q
    |||||||||||||| ||||   |||| ||| |||   |||| |||||||||| ||  ||||||||||||||||||||||||||  | |||||||||||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctca--caaccacactttctc 13780738  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 30838630 - 30838715
Alignment:
Q  461 taggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||||| |||||| |  |||||   ||| ||||||||||| |  |||||||||||| ||| ||||||||||    
T  30838630 taggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 30838715  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 43490504 - 43490419
Alignment:
Q  460 ataggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctca 545  Q
    |||| ||||||||||||||||| |||||| || ||||| ||||| ||||| | ||| |  |||||||||||| ||| |||||||||    
T  43490504 atagaaaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctca 43490419  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 34895842 - 34895758
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||| ||||||||||||| | |||||||| |||  | ||| |||||||||||||  ||||| || ||| ||||||||||||||    
T  34895842 aggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 34895758  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 1750414 - 1750497
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||||| |||||| || ||||  ||||| ||||||| ||| |  |||||||||||  ||| ||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 1750497  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 4299518 - 4299437
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||| ||||||| ||||||||||||||  | ||| ||||| |||||||  |  || |||||| ||||||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcac 4299437  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 12302354 - 12302270
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| |  ||||  ||||| ||||||| ||| |  |||||||||||  ||| ||||||||||    
T  12302354 aggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 12302270  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 43335864 - 43335780
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||| ||||||||| |||| || ||||   |||| |||| |||||| |  |||||||||||| ||| ||||||||||    
T  43335864 aggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 43335780  T

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Target: scaffold0038 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 464 - 546
Target Start/End: Original strand, 112656 - 112738
Alignment:
Q  464 gaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||| |||||| || ||||||||||| ||||||| ||| |  |||||||||||| ||| ||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 112738  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 45817 - 45736
Alignment:
Q  465 aaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    ||||||||||||||||| ||||||||||||||  | ||| |||| || ||| |  | |||||||||| ||||||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 45736  T

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Target: scaffold0385 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 11250 - 11334
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||| |||||||||  ||||| |||||||  ||||| ||||||||||  |  |||||||||||| ||| ||||||||||    
T  11250 aggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcac 11334  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 684 - 768
Alignment:
Q  462 aggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||||||||| |||||| || ||||   |||| |||||| |||| |  |||||||||||| ||| ||||||||||    
T  684 aggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 768  T

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Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 35556 - 35473
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatctcac 546  Q
    |||||||||||||| |||| | ||||||||||||    ||| |||||||||||||  ||||| || ||| ||||||||||||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcac 35473  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 543
Target Start/End: Complemental strand, 23521 - 23441
Alignment:
Q  463 ggaaaatgttacatgaacatcctttaatcatacattccattatacaccccatgcaccagggatattttgataaattcatct 543  Q
    ||||||||||| ||||||| |||||| || |||| |||||| |||| |||||| |  || ||||||||| ||| |||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 23441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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