View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5839_high_29 (Length: 214)
Name: NF5839_high_29
Description: NF5839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5839_high_29 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 43435939 - 43436123
Alignment:
| Q |
14 |
gagatgaaggacaatcgccgcatgagcagccgagtgaagtgtcattgcatgaatagacaggtgcattcataggtttcataggagaagagtcaggaatggt |
113 |
Q |
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| T |
43435939 |
gagatgaaggacaatcgccgcatgagcagccgagtgaagtgtcattgcatgaatagacaggtgcattcataggtttcataggagaagagtcaggaatggt |
43436038 |
T |
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| Q |
114 |
tgtcttaaaatgtatagaataaggtgaaccaggaaaaccaagagggactttttgtccaagaaatgaaaaccactcttgataattg |
198 |
Q |
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| T |
43436039 |
tgtcttaaaatgtatagaataaggtgaaccaggaaaaccaagagggactttttgtccaagaaatgaaaaccactcttgataattg |
43436123 |
T |
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