View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5839_low_8 (Length: 402)

Name: NF5839_low_8
Description: NF5839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5839_low_8
NF5839_low_8
[»] chr7 (66 HSPs)
chr7 (16-190)||(12271122-12271296)
chr7 (248-397)||(12270959-12271106)
chr7 (259-367)||(31502534-31502643)
chr7 (261-372)||(11824067-11824179)
chr7 (259-372)||(22189935-22190049)
chr7 (271-372)||(33008100-33008202)
chr7 (258-359)||(44511005-44511107)
chr7 (262-349)||(7775019-7775107)
chr7 (292-360)||(19422938-19423006)
chr7 (292-367)||(14795132-14795207)
chr7 (292-367)||(15242124-15242199)
chr7 (259-360)||(12263506-12263608)
chr7 (279-367)||(32205080-32205165)
chr7 (259-359)||(27949282-27949383)
chr7 (260-367)||(17354598-17354706)
chr7 (259-359)||(6442174-6442275)
chr7 (260-372)||(13919776-13919889)
chr7 (259-367)||(27888283-27888392)
chr7 (292-371)||(24539227-24539306)
chr7 (295-367)||(32212976-32213048)
chr7 (292-343)||(17749719-17749770)
chr7 (261-338)||(11692209-11692287)
chr7 (259-367)||(46517294-46517401)
chr7 (281-358)||(8073381-8073458)
chr7 (259-351)||(44350872-44350965)
chr7 (258-329)||(19494408-19494480)
chr7 (299-367)||(27320226-27320294)
chr7 (279-371)||(32605329-32605420)
chr7 (303-350)||(2520651-2520698)
chr7 (296-371)||(39254080-39254155)
chr7 (299-350)||(41258182-41258233)
chr7 (299-365)||(45909570-45909636)
chr7 (295-367)||(26703547-26703617)
chr7 (210-250)||(7843731-7843771)
chr7 (210-250)||(7845109-7845149)
chr7 (299-367)||(13919894-13919962)
chr7 (295-367)||(22786152-22786224)
chr7 (299-371)||(25428473-25428545)
chr7 (294-338)||(31874061-31874105)
chr7 (323-367)||(42863569-42863613)
chr7 (282-349)||(4090071-4090138)
chr7 (249-359)||(25092721-25092832)
chr7 (307-350)||(39523593-39523636)
chr7 (302-372)||(19840878-19840948)
chr7 (321-371)||(27949408-27949458)
chr7 (292-350)||(32055594-32055652)
chr7 (306-344)||(43930078-43930116)
chr7 (285-350)||(3602066-3602131)
chr7 (304-365)||(20954798-20954859)
chr7 (300-329)||(27849516-27849545)
chr7 (210-243)||(34227675-34227708)
chr7 (279-359)||(45909464-45909545)
chr7 (212-248)||(7843513-7843549)
chr7 (299-367)||(14759757-14759825)
chr7 (279-367)||(25428570-25428658)
chr7 (303-359)||(26190021-26190077)
chr7 (299-367)||(26703438-26703506)
chr7 (212-248)||(26945508-26945544)
chr7 (212-244)||(26945728-26945760)
chr7 (212-244)||(31365269-31365301)
chr7 (298-370)||(31959967-31960039)
chr7 (212-244)||(38837743-38837775)
chr7 (212-244)||(43742247-43742279)
chr7 (212-244)||(44426596-44426628)
chr7 (212-244)||(46004549-46004581)
chr7 (313-365)||(48374440-48374492)
[»] chr6 (38 HSPs)
chr6 (259-371)||(34905333-34905446)
chr6 (279-358)||(5106308-5106387)
chr6 (271-361)||(31116206-31116297)
chr6 (259-358)||(10133228-10133328)
chr6 (259-372)||(445814-445928)
chr6 (259-371)||(32122792-32122905)
chr6 (260-372)||(35128794-35128907)
chr6 (262-360)||(31443967-31444066)
chr6 (304-367)||(8441953-8442016)
chr6 (304-367)||(8450757-8450820)
chr6 (271-345)||(12327287-12327362)
chr6 (279-367)||(13001693-13001781)
chr6 (279-359)||(19090306-19090386)
chr6 (292-367)||(6531402-6531477)
chr6 (270-351)||(2931578-2931660)
chr6 (285-367)||(20128868-20128950)
chr6 (258-343)||(21987317-21987403)
chr6 (285-367)||(22203920-22204002)
chr6 (295-344)||(4595766-4595815)
chr6 (300-357)||(12488156-12488213)
chr6 (299-372)||(19090208-19090281)
chr6 (260-367)||(10060860-10060968)
chr6 (299-367)||(19737433-19737501)
chr6 (258-321)||(32112786-32112850)
chr6 (279-342)||(19737526-19737589)
chr6 (299-345)||(373513-373559)
chr6 (299-345)||(9940381-9940427)
chr6 (295-349)||(12690271-12690325)
chr6 (283-360)||(2675903-2675980)
chr6 (292-349)||(3030521-3030578)
chr6 (299-360)||(10060973-10061034)
chr6 (212-244)||(10588967-10588999)
chr6 (212-244)||(11140469-11140501)
chr6 (212-244)||(19284369-19284401)
chr6 (212-244)||(21385003-21385035)
chr6 (212-244)||(22857486-22857518)
chr6 (212-248)||(25119100-25119136)
chr6 (212-244)||(25119484-25119516)
[»] chr3 (56 HSPs)
chr3 (259-367)||(5452130-5452239)
chr3 (259-372)||(28529249-28529361)
chr3 (294-367)||(20493551-20493624)
chr3 (259-351)||(26310516-26310609)
chr3 (259-372)||(37776773-37776887)
chr3 (259-332)||(18427220-18427294)
chr3 (259-367)||(52124026-52124135)
chr3 (279-366)||(27243047-27243134)
chr3 (259-360)||(41451965-41452067)
chr3 (279-360)||(24734713-24734794)
chr3 (279-371)||(13809079-13809170)
chr3 (279-371)||(40715953-40716045)
chr3 (259-372)||(46450063-46450176)
chr3 (258-367)||(46160950-46161058)
chr3 (289-351)||(45515596-45515658)
chr3 (299-360)||(24748915-24748976)
chr3 (279-360)||(46237137-46237218)
chr3 (282-358)||(22604570-22604646)
chr3 (258-343)||(20791321-20791407)
chr3 (197-250)||(27068526-27068579)
chr3 (279-360)||(50661613-50661694)
chr3 (283-367)||(29389108-29389192)
chr3 (279-359)||(37600221-37600301)
chr3 (299-367)||(38928007-38928075)
chr3 (279-351)||(41707530-41707602)
chr3 (279-347)||(46575969-46576037)
chr3 (260-359)||(54140964-54141064)
chr3 (283-338)||(138793-138848)
chr3 (249-343)||(14236044-14236139)
chr3 (279-350)||(24749001-24749072)
chr3 (201-244)||(27068530-27068573)
chr3 (285-359)||(8825076-8825150)
chr3 (212-248)||(8036794-8036830)
chr3 (292-372)||(10769829-10769909)
chr3 (285-357)||(49720099-49720171)
chr3 (299-367)||(54140891-54140959)
chr3 (258-372)||(29755496-29755611)
chr3 (260-342)||(43657067-43657150)
chr3 (212-247)||(50416475-50416510)
chr3 (300-367)||(52951377-52951444)
chr3 (259-329)||(55452085-55452156)
chr3 (306-344)||(13639426-13639464)
chr3 (285-351)||(15790466-15790532)
chr3 (299-357)||(42780681-42780739)
chr3 (305-347)||(46156741-46156783)
chr3 (303-365)||(52951475-52951537)
chr3 (298-368)||(55283167-55283237)
chr3 (283-316)||(18722535-18722568)
chr3 (212-249)||(19012576-19012613)
chr3 (299-372)||(37600123-37600196)
chr3 (249-337)||(38414678-38414767)
chr3 (294-350)||(7640701-7640757)
chr3 (212-244)||(12974204-12974236)
chr3 (296-367)||(30624634-30624703)
chr3 (212-244)||(36185919-36185951)
chr3 (212-244)||(50416578-50416610)
[»] chr4 (63 HSPs)
chr4 (259-372)||(8108952-8109066)
chr4 (259-371)||(24834575-24834688)
chr4 (259-360)||(43771134-43771236)
chr4 (292-367)||(40991693-40991768)
chr4 (259-360)||(50571872-50571974)
chr4 (258-360)||(20454548-20454649)
chr4 (259-358)||(50164405-50164505)
chr4 (277-367)||(33653578-33653668)
chr4 (285-371)||(39016660-39016746)
chr4 (259-372)||(39471153-39471267)
chr4 (258-358)||(49242180-49242281)
chr4 (281-357)||(754673-754749)
chr4 (281-348)||(722177-722244)
chr4 (262-360)||(34129473-34129572)
chr4 (292-373)||(37315558-37315636)
chr4 (254-352)||(50481610-50481709)
chr4 (269-371)||(43958148-43958250)
chr4 (254-349)||(47009208-47009304)
chr4 (292-359)||(47237845-47237912)
chr4 (299-345)||(16178697-16178743)
chr4 (259-367)||(20225411-20225518)
chr4 (271-360)||(22592312-22592402)
chr4 (294-343)||(21776951-21777000)
chr4 (259-331)||(24938485-24938558)
chr4 (258-341)||(2088734-2088818)
chr4 (279-343)||(25719204-25719268)
chr4 (291-350)||(24106750-24106809)
chr4 (292-350)||(27654495-27654553)
chr4 (259-360)||(48339410-48339512)
chr4 (271-335)||(29699522-29699587)
chr4 (258-342)||(30867001-30867086)
chr4 (262-342)||(42862494-42862575)
chr4 (299-360)||(51206157-51206218)
chr4 (259-326)||(26361378-26361446)
chr4 (295-359)||(33996042-33996106)
chr4 (302-366)||(40812039-40812103)
chr4 (269-359)||(46242024-46242113)
chr4 (323-367)||(53870998-53871042)
chr4 (212-247)||(6841816-6841851)
chr4 (212-247)||(8165757-8165792)
chr4 (280-370)||(10169737-10169825)
chr4 (260-338)||(13069971-13070049)
chr4 (212-243)||(21098146-21098177)
chr4 (212-247)||(30779338-30779373)
chr4 (212-247)||(33883289-33883324)
chr4 (281-328)||(43124607-43124654)
chr4 (280-330)||(51206081-51206131)
chr4 (289-359)||(51904717-51904787)
chr4 (196-237)||(1492871-1492912)
chr4 (214-247)||(17109714-17109747)
chr4 (212-241)||(27865630-27865659)
chr4 (271-351)||(50879473-50879554)
chr4 (212-244)||(1492670-1492702)
chr4 (258-329)||(2860916-2860988)
chr4 (212-244)||(12722735-12722767)
chr4 (212-244)||(17109932-17109964)
chr4 (212-244)||(21995668-21995700)
chr4 (212-244)||(31763122-31763154)
chr4 (212-244)||(36924239-36924271)
chr4 (299-371)||(39016777-39016849)
chr4 (305-349)||(40615247-40615291)
chr4 (279-335)||(44832496-44832552)
chr4 (285-329)||(52671869-52671913)
[»] chr2 (61 HSPs)
chr2 (259-371)||(9470078-9470191)
chr2 (292-367)||(45554568-45554643)
chr2 (259-372)||(12989187-12989301)
chr2 (259-370)||(6980190-6980302)
chr2 (293-367)||(3804585-3804659)
chr2 (258-372)||(11539419-11539536)
chr2 (263-372)||(18511283-18511393)
chr2 (282-372)||(26767855-26767945)
chr2 (258-360)||(15508922-15509025)
chr2 (258-371)||(44274232-44274345)
chr2 (279-367)||(42182890-42182978)
chr2 (259-359)||(24497201-24497302)
chr2 (279-372)||(28898128-28898221)
chr2 (259-359)||(30718397-30718497)
chr2 (259-351)||(38464180-38464273)
chr2 (295-359)||(25666700-25666764)
chr2 (277-360)||(8009521-8009604)
chr2 (295-358)||(36471945-36472008)
chr2 (286-368)||(16719528-16719610)
chr2 (259-360)||(34142209-34142311)
chr2 (279-372)||(37228494-37228588)
chr2 (271-351)||(10981535-10981616)
chr2 (292-360)||(1107046-1107114)
chr2 (279-339)||(1110227-1110287)
chr2 (289-345)||(42579758-42579814)
chr2 (283-370)||(4602962-4603049)
chr2 (212-247)||(22596299-22596334)
chr2 (292-343)||(41805880-41805931)
chr2 (296-343)||(43404414-43404461)
chr2 (296-366)||(2122797-2122867)
chr2 (279-341)||(4964764-4964826)
chr2 (292-365)||(31494211-31494282)
chr2 (292-350)||(43400151-43400209)
chr2 (300-360)||(11729715-11729775)
chr2 (300-359)||(17188076-17188133)
chr2 (299-367)||(28898035-28898103)
chr2 (299-367)||(37719835-37719903)
chr2 (212-247)||(12449049-12449084)
chr2 (293-360)||(31395550-31395617)
chr2 (297-372)||(33678224-33678299)
chr2 (293-372)||(41546133-41546211)
chr2 (299-369)||(4964669-4964739)
chr2 (300-358)||(17505921-17505979)
chr2 (201-235)||(19246874-19246908)
chr2 (289-351)||(19639110-19639172)
chr2 (289-351)||(19837703-19837765)
chr2 (270-351)||(25730520-25730602)
chr2 (292-350)||(37077978-37078036)
chr2 (323-372)||(19193496-19193545)
chr2 (212-245)||(20661393-20661426)
chr2 (306-371)||(27968915-27968980)
chr2 (306-371)||(28091607-28091672)
chr2 (306-371)||(28101839-28101904)
chr2 (212-244)||(15253034-15253066)
chr2 (212-244)||(24183611-24183643)
chr2 (212-244)||(25575321-25575353)
chr2 (296-360)||(29795813-29795877)
chr2 (313-365)||(30706397-30706449)
chr2 (212-244)||(31783791-31783823)
chr2 (212-244)||(31783999-31784031)
chr2 (296-372)||(40535098-40535174)
[»] chr8 (43 HSPs)
chr8 (259-370)||(32072095-32072207)
chr8 (258-367)||(1977242-1977352)
chr8 (261-372)||(9952829-9952941)
chr8 (259-359)||(28413939-28414040)
chr8 (258-345)||(17499302-17499390)
chr8 (262-367)||(5979881-5979987)
chr8 (259-360)||(8903860-8903962)
chr8 (279-371)||(6387560-6387650)
chr8 (259-367)||(8914772-8914881)
chr8 (259-367)||(16983395-16983504)
chr8 (264-351)||(34861262-34861348)
chr8 (292-372)||(41727426-41727506)
chr8 (261-343)||(13407396-13407479)
chr8 (282-360)||(35151823-35151901)
chr8 (261-342)||(35689506-35689588)
chr8 (258-330)||(31301153-31301226)
chr8 (258-357)||(11962750-11962850)
chr8 (299-351)||(13856506-13856558)
chr8 (258-367)||(23685132-23685242)
chr8 (259-360)||(24055995-24056097)
chr8 (279-345)||(36804930-36804996)
chr8 (289-350)||(16441908-16441969)
chr8 (300-360)||(12212130-12212190)
chr8 (300-360)||(12456558-12456618)
chr8 (291-343)||(44709296-44709348)
chr8 (279-349)||(7599513-7599583)
chr8 (259-316)||(17741597-17741655)
chr8 (259-367)||(43506539-43506645)
chr8 (302-367)||(31691625-31691690)
chr8 (212-244)||(186095-186127)
chr8 (259-321)||(13214542-13214605)
chr8 (212-247)||(15809854-15809889)
chr8 (212-247)||(35448624-35448659)
chr8 (259-359)||(17716862-17716961)
chr8 (292-338)||(45218621-45218667)
chr8 (258-343)||(45246459-45246545)
chr8 (296-349)||(16314383-16314436)
chr8 (299-344)||(16441828-16441873)
chr8 (289-350)||(24184385-24184446)
chr8 (212-241)||(41451249-41451278)
chr8 (212-244)||(17656616-17656648)
chr8 (212-244)||(17792906-17792938)
chr8 (212-244)||(23567484-23567516)
[»] chr1 (70 HSPs)
chr1 (280-359)||(26980354-26980433)
chr1 (279-367)||(6133715-6133803)
chr1 (260-371)||(41095680-41095792)
chr1 (281-367)||(25543341-25543427)
chr1 (279-367)||(931375-931463)
chr1 (259-372)||(41958081-41958193)
chr1 (258-367)||(19101670-19101780)
chr1 (259-360)||(28218118-28218220)
chr1 (260-372)||(32848654-32848767)
chr1 (292-372)||(18157034-18157114)
chr1 (260-367)||(41917996-41918104)
chr1 (259-360)||(10659838-10659941)
chr1 (259-345)||(29673498-29673585)
chr1 (258-367)||(22540369-22540479)
chr1 (279-367)||(2225227-2225313)
chr1 (279-372)||(11135735-11135828)
chr1 (289-350)||(28274804-28274865)
chr1 (299-367)||(13388335-13388403)
chr1 (303-367)||(39039470-39039534)
chr1 (292-371)||(13114774-13114853)
chr1 (292-365)||(4578681-4578752)
chr1 (258-339)||(36566925-36567007)
chr1 (259-367)||(3872704-3872812)
chr1 (279-372)||(11430437-11430530)
chr1 (259-351)||(33193067-33193160)
chr1 (259-351)||(44271935-44272028)
chr1 (260-360)||(44739126-44739227)
chr1 (301-350)||(52158671-52158720)
chr1 (279-367)||(14094092-14094180)
chr1 (292-343)||(15523235-15523286)
chr1 (292-343)||(15531229-15531280)
chr1 (294-345)||(32211890-32211941)
chr1 (292-350)||(14341025-14341083)
chr1 (259-344)||(15928579-15928665)
chr1 (259-332)||(50539160-50539234)
chr1 (259-359)||(11987635-11987736)
chr1 (279-340)||(50773202-50773263)
chr1 (260-371)||(8899011-8899123)
chr1 (212-252)||(33156982-33157022)
chr1 (258-349)||(37553018-37553110)
chr1 (212-247)||(10974628-10974663)
chr1 (299-366)||(11135853-11135920)
chr1 (212-243)||(18057823-18057854)
chr1 (280-351)||(27570242-27570313)
chr1 (264-350)||(28941840-28941927)
chr1 (307-350)||(31602077-31602120)
chr1 (212-247)||(31763987-31764022)
chr1 (292-323)||(31866361-31866392)
chr1 (261-351)||(41948218-41948309)
chr1 (212-247)||(42133939-42133974)
chr1 (302-341)||(50424980-50425019)
chr1 (292-350)||(21977205-21977263)
chr1 (306-344)||(24886061-24886099)
chr1 (307-349)||(27464749-27464791)
chr1 (259-328)||(30678981-30679051)
chr1 (298-367)||(21466681-21466750)
chr1 (259-347)||(49730885-49730974)
chr1 (212-244)||(1395365-1395397)
chr1 (212-244)||(9041065-9041097)
chr1 (294-330)||(9165340-9165376)
chr1 (299-367)||(11430555-11430622)
chr1 (212-244)||(14229170-14229202)
chr1 (292-332)||(15660929-15660969)
chr1 (212-244)||(17893287-17893319)
chr1 (279-359)||(28109877-28109957)
chr1 (215-251)||(31763766-31763802)
chr1 (212-244)||(32143783-32143815)
chr1 (299-367)||(41095607-41095675)
chr1 (212-244)||(49992516-49992548)
chr1 (299-371)||(50773105-50773177)
[»] scaffold0543 (1 HSPs)
scaffold0543 (259-345)||(9687-9774)
[»] scaffold0492 (1 HSPs)
scaffold0492 (259-345)||(11233-11320)
[»] chr5 (51 HSPs)
chr5 (259-367)||(10142046-10142153)
chr5 (258-351)||(17537171-17537265)
chr5 (279-367)||(4959279-4959367)
chr5 (281-367)||(28490815-28490901)
chr5 (198-247)||(25545572-25545621)
chr5 (259-367)||(34368361-34368470)
chr5 (279-372)||(42224682-42224775)
chr5 (259-329)||(5413807-5413878)
chr5 (254-351)||(4714766-4714864)
chr5 (266-371)||(31542320-31542426)
chr5 (297-350)||(1649568-1649621)
chr5 (271-338)||(10253164-10253232)
chr5 (295-367)||(30325981-30326053)
chr5 (280-360)||(34384783-34384863)
chr5 (259-358)||(37455359-37455459)
chr5 (292-372)||(40971557-40971637)
chr5 (259-326)||(41330463-41330531)
chr5 (259-345)||(10950109-10950196)
chr5 (260-338)||(13456236-13456315)
chr5 (259-345)||(25710542-25710629)
chr5 (259-372)||(25630803-25630917)
chr5 (258-343)||(27592521-27592607)
chr5 (259-345)||(28434888-28434973)
chr5 (212-249)||(11660786-11660823)
chr5 (259-359)||(28611848-28611949)
chr5 (259-367)||(39246609-39246718)
chr5 (264-348)||(43541871-43541956)
chr5 (296-372)||(28223884-28223960)
chr5 (294-350)||(32309498-32309554)
chr5 (212-247)||(22695554-22695589)
chr5 (212-243)||(28069246-28069277)
chr5 (296-367)||(32050418-32050489)
chr5 (212-243)||(36864282-36864313)
chr5 (263-345)||(41105644-41105727)
chr5 (212-246)||(20134195-20134229)
chr5 (299-365)||(40971453-40971519)
chr5 (298-359)||(2525583-2525644)
chr5 (279-332)||(25564037-25564090)
chr5 (212-244)||(3340588-3340620)
chr5 (298-342)||(4959391-4959435)
chr5 (212-244)||(7286751-7286783)
chr5 (307-343)||(7584863-7584899)
chr5 (212-244)||(15559047-15559079)
chr5 (299-367)||(17568700-17568768)
chr5 (212-244)||(20134413-20134445)
chr5 (295-359)||(26072112-26072176)
chr5 (300-372)||(26072218-26072290)
chr5 (262-345)||(32050330-32050414)
chr5 (212-244)||(39861794-39861826)
chr5 (299-367)||(42224589-42224657)
chr5 (259-330)||(43405431-43405503)
[»] scaffold1450 (1 HSPs)
scaffold1450 (197-244)||(748-795)
[»] scaffold0005 (1 HSPs)
scaffold0005 (292-350)||(296854-296912)
[»] scaffold0155 (1 HSPs)
scaffold0155 (279-332)||(35630-35683)
[»] scaffold0018 (1 HSPs)
scaffold0018 (259-330)||(27850-27922)
[»] scaffold0838 (1 HSPs)
scaffold0838 (278-351)||(2239-2312)
[»] scaffold0832 (1 HSPs)
scaffold0832 (278-351)||(2270-2343)
[»] scaffold0204 (1 HSPs)
scaffold0204 (259-342)||(26932-27016)
[»] scaffold0516 (1 HSPs)
scaffold0516 (212-247)||(1262-1297)
[»] scaffold0249 (1 HSPs)
scaffold0249 (212-247)||(23539-23574)
[»] scaffold0102 (1 HSPs)
scaffold0102 (212-249)||(33609-33646)
[»] scaffold0129 (1 HSPs)
scaffold0129 (212-244)||(20134-20166)


Alignment Details
Target: chr7 (Bit Score: 175; Significance: 4e-94; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 12271296 - 12271122
Alignment:
Q  16 cagtatccacccatataaagttattgagattactcctccacccaagtctcttggcgttcgttgtcttccccccgtaagcctccattccattccattcatt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12271296 cagtatccacccatataaagttattgagattactcctccacccaagtctcttggcgttcgttgtcttccccccgtaagcctccattccattccattcatt 12271197  T
Q  116 tttcactattaccaatttggatcaaattattaacctataagtagtgctagcaaccctctcttttaaacaccctct 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12271196 tttcactattaccaatttggatcaaattattaacctataagtagtgctagcaaccctctcttttaaacaccctct 12271122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 248 - 397
Target Start/End: Complemental strand, 12271106 - 12270959
Alignment:
Q  248 cttatcgtgtatctacacttagaaaatagaaccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaa 347  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||  | |||||||||  || || |||||||||||||    
T  12271106 cttatcgtgtatctacactttgaaaatagaaccacacaaagtggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgttgaa 12271007  T
Q  348 aagttagtgttgccagcatttctcacctagtatattagttactctctctg 397  Q
    ||||  ||||||| |||||| ||||| |||||||||||||||||||||||    
T  12271006 aagt--gtgttgctagcattcctcacatagtatattagttactctctctg 12270959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 31502534 - 31502643
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| |||| ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  31502534 tctacactttgaaaattgaacgcacacaaaatggtgggacataccttgatttcatccaataaaagagtgagtgttagagagactgttgaaaagtgagtgt 31502633  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  31502634 tgctagcatt 31502643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 261 - 372
Target Start/End: Complemental strand, 11824179 - 11824067
Alignment:
Q  261 tacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||| |||||| ||| | |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| | |||||||    
T  11824179 tacactttgaaaattgaagctacacaaaatggtgggacatacattgatttcatccaataaaagagtgagtgctagagagagcgttgaaaaatgagtgttg 11824080  T
Q  360 ccagcatttctca 372  Q
    | | |||||||||    
T  11824079 ctaacatttctca 11824067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 22190049 - 22189935
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| ||||||| || |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||| | |||||    
T  22190049 tctacactttgaaaattgaacccacacaaagtggtgggccatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgt 22189950  T
Q  358 tgccagcatttctca 372  Q
    | | |||||| ||||    
T  22189949 ttctagcattcctca 22189935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 372
Target Start/End: Complemental strand, 33008202 - 33008100
Alignment:
Q  271 aaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttc 369  Q
    |||||||||| ||||||| || ||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| |||||| |||||||| |||||| |    
T  33008202 aaatagaacccacacaaagtggtgggacatacaatgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattcc 33008103  T
Q  370 tca 372  Q
    |||    
T  33008102 tca 33008100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 44511005 - 44511107
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||| | |||||| |||| || ||||| ||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||    
T  44511005 atctacacattgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtgagtgctagagagagtgttgaaaagtaagtg 44511104  T
Q  357 ttg 359  Q
    |||    
T  44511105 ttg 44511107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 7775107 - 7775019
Alignment:
Q  262 acacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    |||||| |||||| |||| |||||||| || ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  7775107 acactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgctatagagagtgttgaaaa 7775019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 19422938 - 19423006
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||    
T  19422938 tgggacatacattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgc 19423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 14795207 - 14795132
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||| |||||||| ||||||    
T  14795207 tgggacatacattgatttcatccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcatt 14795132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 15242199 - 15242124
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||| |||||||| ||||||    
T  15242199 tgggacatacattgatttcatccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcatt 15242124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 12263506 - 12263608
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| || || ||||||| |||||||||||||||||||| ||||| | |||||||||  || |||||||||||||||||||| |||||    
T  12263506 tctacactttgaaaattgatcctacacaaagtgatgggacatacattgattccatccgataaaagagtggatgatagagagagtgttgaaaagtaagtgt 12263605  T
Q  358 tgc 360  Q
    |||    
T  12263606 tgc 12263608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 32205165 - 32205080
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||| | ||||||||||||||||||||||| |||||||||||   ||||||||||||| |||||| |||||||| ||||||    
T  32205165 ccacacaaaatggtaggacatacattgatttcatccaataaaagagtgag---tagagagagtgttcaaaagtgagtgttgctagcatt 32205080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 359
Target Start/End: Complemental strand, 27949383 - 27949282
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||| | |||| ||||||||||| | |||||||  |||||||||||||| | ||||||||||||||||||||||||| |||||| |||||    
T  27949383 tctacactttgaaatttgaactcacacaaaatggtaggacataacttgatttcatccaatacaagagtgagtgttagagagagtgttaaaaagtgagtgt 27949284  T
Q  358 tg 359  Q
    ||    
T  27949283 tg 27949282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 367
Target Start/End: Original strand, 17354598 - 17354706
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| | |||||||||| ||| ||| || ||||||||||||||||||||||||| |||||| |||||||||||||||||| | ||||   ||||||    
T  17354598 ctacactttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgtt 17354697  T
Q  359 gccagcatt 367  Q
    || ||||||    
T  17354698 gctagcatt 17354706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 359
Target Start/End: Complemental strand, 6442275 - 6442174
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||| || ||||||||| ||| ||||||||||||||||| ||| ||| || |||||| |||||||||||||||||| | |||||    
T  6442275 tctacactttgaaaattgaatccccacaaaatggtggaacatacattgatttcatacaataaatgactgagtgatagagagagtgttgaaaaatgagtgt 6442176  T
Q  358 tg 359  Q
    ||    
T  6442175 tg 6442174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 13919889 - 13919776
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| |||||| ||||| ||| ||| || |||||||||||||||||||| |||| ||| ||| ||||| ||||||||||| | |||||  ||||||    
T  13919889 ctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaatgagcgagtgctagagagagtgctcaaaagagagtgtt 13919790  T
Q  359 gccagcatttctca 372  Q
    || |||||||||||    
T  13919789 gctagcatttctca 13919776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 27888392 - 27888283
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    |||||||||  ||||| ||||| ||||||| || |||||||||||||||||| ||||||  | || ||||||||||||||||||| | |||||| |||||    
T  27888392 tctacactttaaaaattgaacccacacaaagtggtgggacatacattgattttatccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgt 27888293  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  27888292 tgctagcatt 27888283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 371
Target Start/End: Original strand, 24539227 - 24539306
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||||||||  |||||  ||||| || ||||||||||    
T  24539227 tgggacatatattgattttatccaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatttctc 24539306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 32212976 - 32213048
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||||||| ||||||  ||||| ||||||||||||| |||||| |||||| | ||||||    
T  32212976 gacatacattgatttcatccaataaaagatagagtgctagagagagtgttaaaaagtgagtgttactagcatt 32213048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 17749770 - 17749719
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  17749770 tgggacatatattgattttatccaataaaagagtgagtgttagagagagtgt 17749719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 11692287 - 11692209
Alignment:
Q  261 tacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagag 338  Q
    ||||||| |||||| ||||| ||||||| || | ||||||||||||||||||||||| |||||||||| | ||||||||    
T  11692287 tacactttgaaaattgaacctacacaaagtggtaggacatacattgatttcatccaataaaagagtgaatattagagag 11692209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 46517401 - 46517294
Alignment:
Q  259 tctacacttagaaaatagaaccac-acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | ||| |||| ||||| |||||||||||| |||||| ||| ||||||||| |  |||||||||| |||||| |||||    
T  46517401 tctacactttgaaaattgaacccccacagaatggtgggatatacattgattttatccaataaatgagtgagtgct--agagagtgttaaaaagtgagtgt 46517304  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  46517303 tgctagcatt 46517294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 8073381 - 8073458
Alignment:
Q  281 acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    ||||||| || ||||||||||||||||||||||| | ||||||||||||| |||  ||| ||||||||| | ||||||    
T  8073381 acacaaagtggtgggacatacattgatttcatccgataaaagagtgagtgctaggaagaatgttgaaaaatgagtgtt 8073458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 44350872 - 44350965
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||||| |||||| ||||| | ||||| ||| | ||||||||||||||| |||||| |||| ||||  ||||||||| |||||||||||||    
T  44350872 tctacactttgaaaattgaacctaaacaaagtgacgagacatacattgatttgatccaataaaaaagtggatgttagagaaagtgttgaaaagt 44350965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 19494408 - 19494480
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagt 329  Q
    |||||||||| |||||| ||||| ||| ||| || |||||||||||||||||||| |||| ||||||||||||    
T  19494408 atctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagt 19494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 27320294 - 27320226
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||| || ||| ||||||||||||||| |||||||||||||||| | | |||||| ||||||    
T  27320294 tacattgattttattcaataaaagagtgagtgttggagagagtgttgaaaaatgaatgttgctagcatt 27320226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 32605420 - 32605329
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||||||| | ||| |||||||||||||||||||| | |||||| |||||| || | ||||||||||||||  |||||||| | ||||||||    
T  32605420 ccacacaaagtaatgagacatacattgatttcatcc-ataaaagaatgagtgctaaaaagagtgttgaaaagcaagtgttgctaacatttctc 32605329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 350
Target Start/End: Complemental strand, 2520698 - 2520651
Alignment:
Q  303 ttgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  2520698 ttgatttcacccaataaaagagtgagtgttggagagagtgttgaaaag 2520651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 39254155 - 39254080
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||||||| |||| || ||| ||||||||||||| || ||||| ||||||||||| | |||||| ||||||||||    
T  39254155 acatacattaattttattcaataaaagagtgagtgctatagagaatgttgaaaagtgaatgttgctagcatttctc 39254080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 350
Target Start/End: Complemental strand, 41258233 - 41258182
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||||||||||| | || |||| ||||||||||||||||||||||    
T  41258233 tacattgatttcatccaacgagagggtgactgttagagagagtgttgaaaag 41258182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 45909570 - 45909636
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagca 365  Q
    ||||||||||| | |||| |||||||||||||||||||||||| || |||||  |||||||| ||||    
T  45909570 tacattgattttacccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgctagca 45909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 26703547 - 26703617
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||| || | |||||  |||||||| ||||||    
T  26703547 gacatacattgatttcacccaataaaagagtgagtgctagagagaatgctcaaaag--agtgttgctagcatt 26703617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 7843731 - 7843771
Alignment:
Q  210 gttgcataaggatttccttatacaccataaccgcagccctt 250  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  7843731 gttgcataaggatttctttatacaccataaccgcacccctt 7843771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 7845109 - 7845149
Alignment:
Q  210 gttgcataaggatttccttatacaccataaccgcagccctt 250  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  7845109 gttgcataaggatttccttatgcaccataaccgcacccctt 7845149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 13919894 - 13919962
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||| |||| ||| ||||||||| ||||||||||| | |||||  |||||||| ||||||    
T  13919894 tacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 13919962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 22786224 - 22786152
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||| | || |||| |||||||| ||||||||||| | |||||  |||||||| ||||||    
T  22786224 gacatacattgatttcacctaataaaaaagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 22786152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 25428545 - 25428473
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||||||||| |||||| ||||||||||||| || |||||||| | |||||  |||||||| | ||||||||    
T  25428545 tacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatttctc 25428473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 31874105 - 31874061
Alignment:
Q  294 ggacatacattgatttcatccaacaaaagagtgagtgttagagag 338  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||    
T  31874105 ggacatacattgatttcatccaataaaaaagtgagtgctagagag 31874061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 42863569 - 42863613
Alignment:
Q  323 agtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||    
T  42863569 agtgagtgttagagagagtgtttaaaagtgagtgttgctagcatt 42863613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 4090071 - 4090138
Alignment:
Q  282 cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    |||||| ||||||| |||| ||||||||||||||| |||| | | ||||||| ||||| |||||||||    
T  4090071 cacaaagtgatgggtcatagattgatttcatccaataaaaaaataagtgttaaagagaatgttgaaaa 4090138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 359
Target Start/End: Original strand, 25092721 - 25092832
Alignment:
Q  249 ttatcgtgtatctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaa 347  Q
    |||| |||| |||| ||||||||||| |||| |||||||| |  | ||||||||||||||| |||| ||  |||||||| |||    |||||||||||||    
T  25092721 ttattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacatacattgattgcatcaaatgaaagagtgggtgcggaagagagtgttgaa 25092820  T
Q  348 aagttagtgttg 359  Q
    |||| |||||||    
T  25092821 aagtgagtgttg 25092832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 39523636 - 39523593
Alignment:
Q  307 tttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||    
T  39523636 tttcatccaataaaagaatgagtgttagacagagtgttgaaaag 39523593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 372
Target Start/End: Complemental strand, 19840948 - 19840878
Alignment:
Q  302 attgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||||||| |||| ||||||||||||| ||||||||||| | ||||   |||||||| |||||| ||||    
T  19840948 attgatttcacccaataaaagagtgagtgctagagagagtgctcaaaatagagtgttgctagcattcctca 19840878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 27949408 - 27949458
Alignment:
Q  321 agagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||||||| |||||||||||||| |||||  |||||||| ||||||||||    
T  27949408 agagtgagtattagagagagtgttcaaaagagagtgttgctagcatttctc 27949458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 32055652 - 32055594
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||| | ||||||||||||| ||| |||| ||||||||||| |||||| |||||    
T  32055652 tgggacataaaatgatttcatccaataaatgagttagtgttagagatagtgttcaaaag 32055594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 43930078 - 43930116
Alignment:
Q  306 atttcatccaacaaaagagtgagtgttagagagagtgtt 344  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  43930078 atttcacccaataaaagagtgagtgttagagagagtgtt 43930116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 3602066 - 3602131
Alignment:
Q  285 aaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    |||||| |||||| ||||||  ||||||||||||| ||||| |||||||| ||||| ||| |||||    
T  3602066 aaaatggtgggacctacattactttcatccaacaagagagtaagtgttagggagagggtttaaaag 3602131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 20954798 - 20954859
Alignment:
Q  304 tgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagca 365  Q
    |||||| | |||| |||| |||||||||| |||||||||||||||||  |||||||| ||||    
T  20954798 tgatttaagccaataaaaaagtgagtgtttgagagagtgttgaaaagagagtgttgctagca 20954859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 329
Target Start/End: Complemental strand, 27849545 - 27849516
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagt 329  Q
    ||||||||||||||||||||||||||||||    
T  27849545 acattgatttcatccaacaaaagagtgagt 27849516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 34227708 - 34227675
Alignment:
Q  210 gttgcataaggatttccttatacaccataaccgc 243  Q
    ||||||||||||||||||||| ||||||||||||    
T  34227708 gttgcataaggatttccttatgcaccataaccgc 34227675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 45909545 - 45909464
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaa-caaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||| ||| || |||||||||||||||||||| ||||  |||||||||| || ||| ||||||| | ||||| ||||||||    
T  45909545 ccacataaagtggtgggacatacattgatttcacccaataaaaagagtgaatgctagggagagtgctcaaaagatagtgttg 45909464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 7843549 - 7843513
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagccc 248  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  7843549 tgcataaggattttcttagacaccataaccgcagccc 7843513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 14759757 - 14759825
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||| ||||||||||| ||||||||| ||| ||| ||||||| | |||||  |||||||| ||||||    
T  14759757 tacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcatt 14759825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 367
Target Start/End: Original strand, 25428570 - 25428658
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||| ||| || ||||||||||||||||||||  ||| ||||||||||||  || | |||||| | |||||  |||||||| ||||||    
T  25428570 ccacataaagtggtgggacatacattgatttcacacaataaaagagtgagtactaaaaagagtgctcaaaagagagtgttgctagcatt 25428658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 26190021 - 26190077
Alignment:
Q  303 ttgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||| | |||| |||||||||||||||||||| |||||| |||||  |||||||    
T  26190021 ttgattttacccaataaaagagtgagtgttagagaaagtgttcaaaagagagtgttg 26190077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 26703506 - 26703438
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||| |||||| |||| ||||||||||||| ||||||||||| | | |||  |||||||| ||||||    
T  26703506 tacatttatttcacccaataaaagagtgagtgctagagagagtgctcagaagagagtgttgctagcatt 26703438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 26945544 - 26945508
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagccc 248  Q
    |||||||| |||||||||| |||||||||||||||||    
T  26945544 tgcataagaatttccttatgcaccataaccgcagccc 26945508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 26945728 - 26945760
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  26945728 tgcataaggatttccttatgcaccataaccgca 26945760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 31365301 - 31365269
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  31365301 tgcataaggatttccttatgcaccataaccgca 31365269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 370
Target Start/End: Original strand, 31959967 - 31960039
Alignment:
Q  298 atacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttct 370  Q
    ||||||| ||||||||||| |||  |||||||| ||||||||||| | |||||  |||||||  |||||||||    
T  31959967 atacattaatttcatccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgttagcatttct 31960039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 38837743 - 38837775
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  38837743 tgcataaggatttccttatgcaccataaccgca 38837775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 43742279 - 43742247
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  43742279 tgcataaggatttccttatgcaccataaccgca 43742247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 44426628 - 44426596
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  44426628 tgcataaggatttccttatgcaccataaccgca 44426596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 46004549 - 46004581
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  46004549 tgcataaggatttccttatgcaccataaccgca 46004581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 48374492 - 48374440
Alignment:
Q  313 ccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagca 365  Q
    ||||||| ||||||||| |||||||||||||| |||||  |||||||| ||||    
T  48374492 ccaacaagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 48374440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 34905446 - 34905333
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||    
T  34905446 tctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgt 34905347  T
Q  358 tgccagcatttctc 371  Q
    ||| ||||||||||    
T  34905346 tgctagcatttctc 34905333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 5106387 - 5106308
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    ||||||||| || |||||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||| ||||||    
T  5106387 ccacacaaagtggtgggacatacattgattttatccaataaaaaagtgagtgttagagaaagtgttgaaaagtgagtgtt 5106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 31116206 - 31116297
Alignment:
Q  271 aaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgcc 361  Q
    ||||||||| |||||||| |  ||||||||||||||||||||||||| | |||||||| |||||||||||||||| |||||| |||||||||    
T  31116206 aaatagaacacacacaaagtagtgggacatacattgatttcatccaatagaagagtgaatgttagagagagtgttcaaaagtgagtgttgcc 31116297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 10133228 - 10133328
Alignment:
Q  259 tctacacttagaaaatagaaccac-acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | | ||| || ||||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  10133228 tctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgt 10133327  T
Q  358 t 358  Q
    |    
T  10133328 t 10133328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 445928 - 445814
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    |||| |||| |||||| ||||| ||||||| || || |||||||||||||||||||||| |||| |||||||| |||||| ||||||||||| | ||| |    
T  445928 tctagactttgaaaattgaacccacacaaagtggtgtgacatacattgatttcatccaataaaaaagtgagtgctagagatagtgttgaaaaatgagtat 445829  T
Q  358 tgccagcatttctca 372  Q
    ||| |||||| ||||    
T  445828 tgctagcattcctca 445814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 32122905 - 32122792
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| |||| | ||||||||| ||||||||| ||||||||||||||| |||  |||||||| | || ||||||||||||||  |||||    
T  32122905 tctacactttgaaaattgaactcccacaaaatggtgggacatatattgatttcatccaataaataagtgagtggtggaaagagtgttgaaaagagagtgt 32122806  T
Q  358 tgccagcatttctc 371  Q
    ||  ||||||||||    
T  32122805 tgttagcatttctc 32122792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 35128794 - 35128907
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| |||||| ||||| ||| ||| || |||||||||||||||||| | |||| |||||||||| || ||||||||||||| |||||  ||||||    
T  35128794 ctacactttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtgactgctagagagagtgttcaaaagagagtgtt 35128893  T
Q  359 gccagcatttctca 372  Q
    || |||| ||||||    
T  35128894 gctagcacttctca 35128907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 360
Target Start/End: Complemental strand, 31444066 - 31443967
Alignment:
Q  262 acacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||| |||||| ||||| |||||||||| ||| ||||| ||| ||||||||||| |||||| ||||||||| | ||||||||||||| ||| ||||||    
T  31444066 acactttgaaaattgaaccgacacaaaatggtggaacataaattaatttcatccaataaaagaatgagtgttaaaaagagtgttgaaaaattattgttgc 31443967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 367
Target Start/End: Original strand, 8441953 - 8442016
Alignment:
Q  304 tgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | |||| ||| ||||||    
T  8441953 tgatttcatccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcatt 8442016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 367
Target Start/End: Original strand, 8450757 - 8450820
Alignment:
Q  304 tgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| | |||| ||| ||||||    
T  8450757 tgatttcatccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcatt 8450820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 345
Target Start/End: Original strand, 12327287 - 12327362
Alignment:
Q  271 aaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||||||||| |||||||||| | |||||||||||||||  |||||| |||||||||| || ||||||||||||||    
T  12327287 aaatagaacccacacaaaatggtaggacatacattgattctatccaataaaagagtgactgctagagagagtgttg 12327362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 13001781 - 13001693
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||| ||||||||| |||||||||| |||| ||||||  ||| | ||| |||||||||||||| |||||||| |||||| | ||||||    
T  13001781 ccacataaaatgatgtgacatacatttattttatccaatgaaaaaatgaatgttagagagagtgctgaaaagtgagtgttactagcatt 13001693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 19090306 - 19090386
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||| ||| || |||||||||||||||||||| |||| ||||||||| ||| ||||||||||| | |||||  |||||||    
T  19090306 ccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttg 19090386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 6531402 - 6531477
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||||| |||| ||||||||||||| | ||||||||  | |||||  |||||||| ||||||    
T  6531402 tgggacatacattgatttcacccaataaaagagtgagtgctggagagagtcctcaaaagagagtgttgctagcatt 6531477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 2931660 - 2931578
Alignment:
Q  270 aaaatagaaccac-acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||| ||||||| |||||||| | |||||||||||||||||||| || |||  || || || ||||||||||||||||||||    
T  2931660 aaaattgaaccaccacaaaatggtaggacatacattgatttcatcaaataaataagcgaatgatagagagagtgttgaaaagt 2931578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 20128868 - 20128950
Alignment:
Q  285 aaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||||||||||||| | || ||| |||||| |||| |||| | |||  |||||| |||||||| ||||||    
T  20128868 aaaatgatgggacatacattgatttcaccaaataaatgagtgactgtttgagaaaatgtaaaaaagtaagtgttgctagcatt 20128950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 21987403 - 21987317
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||||||||| | ||||||||| | || ||| || ||||| ||||||||||||||||||| |||| |||||||| || |||||||||    
T  21987403 atctacactttggaaatagaactcgcataaagtggtgggatatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 21987317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 22204002 - 22203920
Alignment:
Q  285 aaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||||||||||||| | || ||| |||||| |||| |||| | |||  |||||| |||||||| ||||||    
T  22204002 aaaatgatgggacatacattgatttcaccaaataaatgagtgactgtttgagaaaatgtaaaaaagtaagtgttgctagcatt 22203920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 4595815 - 4595766
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgtt 344  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||||||    
T  4595815 gacatacattgatttcactcaataaaagagtgagtgctagagagagtgtt 4595766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 357
Target Start/End: Original strand, 12488156 - 12488213
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||||||||||| |||||||||||| ||||| | |||||||||| | ||||||    
T  12488156 acattgatttcatccaataaaagagtgagtattagaaaaagtgttgaaatgatagtgt 12488213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 19090281 - 19090208
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||||| |||| |||| ||||||||||||| ||||||||||| | |||||  |||||||| |||||| ||||    
T  19090281 tacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctca 19090208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 367
Target Start/End: Complemental strand, 10060968 - 10060860
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| |||||| ||||| ||| ||| ||  |||||||||||||||||||   || |||||||||| ||||| | |||||||| |||||  ||||||    
T  10060968 ctacactttgaaaatggaacccacataaagtggcgggacatacattgatttcacataataaaagagtgattgttataaagagtgttcaaaagagagtgtt 10060869  T
Q  359 gccagcatt 367  Q
    || ||||||    
T  10060868 gctagcatt 10060860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 19737501 - 19737433
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||| | |||| ||||||||||||| |||||||| |||| |||||  |||||||| ||||||    
T  19737501 tacattgatttgagccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcatt 19737433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 32112786 - 32112850
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaa 321  Q
    |||||||||| ||||||| |||| |||||||||| || ||||| |||||||||||||||| ||||    
T  32112786 atctacactttgaaaataaaacccacacaaaatggtgtgacatgcattgatttcatccaataaaa 32112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 19737526 - 19737589
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtg 342  Q
    ||||| ||| |||| ||| |||||||||||||| ||||  |||||||||||| |||||||||||    
T  19737526 ccacataaagtgataggatatacattgatttcacccaattaaagagtgagtgctagagagagtg 19737589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 373513 - 373559
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    ||||||||||| |||||| |||| ||| |||||||||||||||||||    
T  373513 tacattgattttatccaataaaatagtaagtgttagagagagtgttg 373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 9940427 - 9940381
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    ||||||||||||| |||| ||||||||||||| |||||||| |||||    
T  9940427 tacattgatttcacccaataaaagagtgagtgctagagagaatgttg 9940381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 12690325 - 12690271
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    ||||| |||| ||||||||||| |||||||  |||||||||||||||||| ||||    
T  12690325 gacatgcattaatttcatccaataaaagagcaagtgttagagagagtgtttaaaa 12690271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 2675980 - 2675903
Alignment:
Q  283 acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||| || ||||||||||||||| ||||| ||| |||||||||| ||||| | | | ||||||||| | ||||||||    
T  2675980 acaaagtggtgggacatacattgaattcattcaataaaagagtgaatgttaaaaaaaatgttgaaaaatgagtgttgc 2675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 3030578 - 3030521
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    ||||||||||| |  |||||||||| || ||||||| | |||||||||||||||||||    
T  3030578 tgggacatacaatagtttcatccaataacagagtgaatattagagagagtgttgaaaa 3030521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 10060973 - 10061034
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||||| ||| |||| |||| |||||||||||||||||||| | |||||  ||||||||    
T  10060973 tacattgatctcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttgc 10061034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 10588967 - 10588999
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  10588967 tgcataaggatttccttatgcaccataaccgca 10588999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 11140469 - 11140501
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||||||||| |||||||    
T  11140469 tgcataaggatttccttatacaccaaaaccgca 11140501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 19284401 - 19284369
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  19284401 tgcataaggatttccttatgcaccataaccgca 19284369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 21385003 - 21385035
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  21385003 tgcataaggatttccttatgcaccataaccgca 21385035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 22857518 - 22857486
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  22857518 tgcataaggatttccttatgcaccataaccgca 22857486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 25119136 - 25119100
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagccc 248  Q
    |||||||| |||||||||| |||||||||||||||||    
T  25119136 tgcataagaatttccttatgcaccataaccgcagccc 25119100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 25119484 - 25119516
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  25119484 tgcataaggatttccttatgcaccataaccgca 25119516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 5452130 - 5452239
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    |||||||||||||||| ||| ||||||||| || ||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||| |||||    
T  5452130 tctacacttagaaaattgaatccacacaaagtggtgggaaatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgt 5452229  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  5452230 tgctagcatt 5452239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 28529361 - 28529249
Alignment:
Q  259 tctacacttagaaaatagaaccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    ||||||||| |||||| ||||| |||| | || ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  28529361 tctacactttgaaaattgaacc-cacacagtggtgggacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgtt 28529263  T
Q  359 gccagcatttctca 372  Q
    || |||||| ||||    
T  28529262 gctagcattcctca 28529249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 20493551 - 20493624
Alignment:
Q  294 ggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||    
T  20493551 ggacatacattgatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcatt 20493624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 26310516 - 26310609
Alignment:
Q  259 tctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||||| |||||| |||||| || |||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  26310516 tctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagagagagtgttgaaaagt 26310609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 37776773 - 37776887
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| ||||||| || | |||||||||||||||||||| || ||||||||||||| | |||| ||||||||||||| |||||    
T  37776773 tctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgt 37776872  T
Q  358 tgccagcatttctca 372  Q
    ||| |||||| ||||    
T  37776873 tgctagcattcctca 37776887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 18427220 - 18427294
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgtt 332  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  18427220 tctacactttgaaaatagaacccacacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgtt 18427294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 52124026 - 52124135
Alignment:
Q  259 tctacacttagaaaatagaaccac-acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | |||||||  ||||||||||||| |||||||||||||||  |||||||| ||||||||| ||| |||||| |||||    
T  52124026 tctacactttgaaaattgaacccccacaaaatagtgggacatacattaatttcatccaacaaataagtgagtgctagagagagcgttaaaaagtgagtgt 52124125  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  52124126 tgctagcatt 52124135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 366
Target Start/End: Complemental strand, 27243134 - 27243047
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcat 366  Q
    ||||| ||| || |||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||||  |||||||| |||||    
T  27243134 ccacataaagtggtgggacatgcattgattttatccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcat 27243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 41451965 - 41452067
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||| ||| |||||| ||||| ||||||| || |||||||||| |||||||||||||| ||||||||||||  ||||||  |||||||||||| |||||    
T  41451965 tctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgt 41452064  T
Q  358 tgc 360  Q
    |||    
T  41452065 tgc 41452067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 360
Target Start/End: Complemental strand, 24734794 - 24734713
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||||| || |||||||||| |||||||||||||| ||||||||||||  ||||||  |||||||||||| ||||||||    
T  24734794 ccacacaaagtggtgggacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgc 24734713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 13809170 - 13809079
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||| |||||| |||||||||||||||||| |||||| ||||||||||  ||||||||||||||  |||||  |||||||| ||||||||||    
T  13809170 ccacataaaatggtgggacatacattgattttatccaataaaagagtga-agttagagagagtgtgtaaaagagagtgttgctagcatttctc 13809079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 40715953 - 40716045
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||||||| ||||| | |||||||| |||||| |  | ||||||||||||| |||||||||||||||||||| |||||||| | ||||||||    
T  40715953 ccacacaaagtgatgagtcatacattaatttcaccatataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctaacatttctc 40716045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 46450176 - 46450063
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaa-tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    ||||||||| | |||||||||| |||||||| || ||||||||||||||||| |||| || ||||||||||||| |  |||||||||| |||||| ||||    
T  46450176 tctacactttgcaaatagaacccacacaaaagtggtgggacatacattgattccatctaataaaagagtgagtgct--agagagtgttcaaaagtgagtg 46450079  T
Q  357 ttgccagcatttctca 372  Q
    |||| |||||| ||||    
T  46450078 ttgctagcattcctca 46450063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 46161058 - 46160950
Alignment:
Q  258 atctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| | ||||||||||| |||||| || | ||||||  ||||||||||||||| ||||||||||||| |  |||||||||| |||||| ||||    
T  46161058 atctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttcatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtg 46160961  T
Q  357 ttgccagcatt 367  Q
    |||| ||||||    
T  46160960 ttgctagcatt 46160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 351
Target Start/End: Original strand, 45515596 - 45515658
Alignment:
Q  289 tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||||| ||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||    
T  45515596 tgatgggatatacattgatttcatccaataaaatagtgagtgttggagagagtgttaaaaagt 45515658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 360
Target Start/End: Complemental strand, 24748976 - 24748915
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | |||||  ||||||||    
T  24748976 tacattgatttcatccaataaaagagtgagtgttagagagagtgctcaaaagagagtgttgc 24748915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 360
Target Start/End: Original strand, 46237137 - 46237218
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||| ||| || ||||||||||||||||||||||||| |||||||||| || ||||||||||| | |||||  ||||||||    
T  46237137 ccacataaagtggtgggacatacattgatttcatccaataaaagagtgattgctagagagagtgctcaaaagagagtgttgc 46237218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 22604646 - 22604570
Alignment:
Q  282 cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    ||||||||| ||||||||||||| |||| |||||| ||| |||||||||||| ||||||| || |||||| ||||||    
T  22604646 cacaaaatggtgggacatacattaattttatccaataaatgagtgagtgttaaagagagtattaaaaagtaagtgtt 22604570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 20791407 - 20791321
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||||||||| | ||||||||| | || ||| || ||||||||||||||||||||||||| |||| |||||||| || |||||||||    
T  20791407 atctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 20791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 27068526 - 27068579
Alignment:
Q  197 ggggtgcggttatgttgcataaggatttccttatacaccataaccgcagccctt 250  Q
    |||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  27068526 ggggtgcggttatggtgcataaggaaatccttatgcaccataaccgcagccctt 27068579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 360
Target Start/End: Original strand, 50661613 - 50661694
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||| ||| || |||||||| ||||||||| ||| || |||||||| |||||||||||||||||| |||||  ||||||||    
T  50661613 ccacataaagtggtgggacatgcattgattttatctaataaaagagtaagtgttagagagagtgtttaaaagagagtgttgc 50661694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 367
Target Start/End: Original strand, 29389108 - 29389192
Alignment:
Q  283 acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||| || |||||||||||||||||| || |||  ||||||||||||||| || ||||| | |||||| |||||||| ||||||    
T  29389108 acaaagtggtgggacatacattgattttattcaatgaaagagtgagtgttaaagtgagtgctcaaaagtgagtgttgctagcatt 29389192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 37600221 - 37600301
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||| ||| || |||||||||||||||||||| |||| ||||||||| ||| ||||||||||| | |||||  |||||||    
T  37600221 ccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttg 37600301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 38928075 - 38928007
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||| |||| |||||||||||||||||||| |||| | |||||  |||||||| ||||||    
T  38928075 tacattgatttcacccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcatt 38928007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 41707530 - 41707602
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||||| |||||  |||||||||||||| ||||||  | |||||||||||||||||||||| | ||||||    
T  41707530 ccacacaaagtgatgaaacatacattgattttatccaatgagagagtgagtgttagagagagtgctcaaaagt 41707602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 46576037 - 46575969
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaa 347  Q
    ||||| ||| || |||||||||||||| ||||| |||| || |||||||||||| ||||||||||||||    
T  46576037 ccacaaaaagtggtgggacatacattggtttcagccaataagagagtgagtgtttgagagagtgttgaa 46575969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 359
Target Start/End: Original strand, 54140964 - 54141064
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| |||||| ||||| ||  ||| || |||||||||||||||||||| |||| ||| ||||||||| ||||||||||| | |||||  ||||||    
T  54140964 ctacactttgaaaatggaacccacgtaaagtggtgggacatacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagaaagtgtt 54141063  T
Q  359 g 359  Q
    |    
T  54141064 g 54141064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 138848 - 138793
Alignment:
Q  283 acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagag 338  Q
    |||||||| || |||||||||||||||||| ||| ||||||||||||| |||||||    
T  138848 acaaaatggtgagacatacattgatttcattcaataaaagagtgagtgctagagag 138793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 14236139 - 14236044
Alignment:
Q  249 ttatcgtgtatctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||| ||| |||||||||| | ||||||||| | || ||| || ||||||||| ||||||||||||||| |||| |||||||| || |||||||||    
T  14236139 ttattgtggatctacactttggaaatagaactcgcataaagtggtgggacatatattgatttcatccaataaaatagtgagtgctaaagagagtgt 14236044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 24749001 - 24749072
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||| |||||| |||||||||||||||| ||| || | |||||| |||||||||||||||| ||| |||||    
T  24749001 ccacataaaatggtgggacatacattgatatcaccccataaaagaatgagtgttagagagagcgttcaaaag 24749072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 27068573 - 27068530
Alignment:
Q  201 tgcggttatgttgcataaggatttccttatacaccataaccgca 244  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  27068573 tgcggttatggtgcataaggatttccttatgcaccataaccgca 27068530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 8825076 - 8825150
Alignment:
Q  285 aaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    |||||| ||||||||| |||||||||||| || ||||| ||||||  ||||||||  |||||||||| |||||||    
T  8825076 aaaatggtgggacatatattgatttcatctaataaaagggtgagtactagagagatggttgaaaagtgagtgttg 8825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 8036830 - 8036794
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagccc 248  Q
    ||||||||||||||||||| |||||||||||||||||    
T  8036830 tgcataaggatttccttatgcaccataaccgcagccc 8036794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 10769829 - 10769909
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||||||||||||||||| | || ||||||||  ||| ||||||||||| | |||||  |||||||| |||||| ||||    
T  10769829 tgggacatacattgatttcaccaaataaaagagtcggtgatagagagagtgctcaaaagagagtgttgctagcattcctca 10769909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 49720099 - 49720171
Alignment:
Q  285 aaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    |||||| ||||| ||||||| |||| |||||| ||   |||||||||| |||||||||||||||||| |||||    
T  49720099 aaaatggtgggatatacattcatttaatccaataagcaagtgagtgtttgagagagtgttgaaaagtgagtgt 49720171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 54140959 - 54140891
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||| | |||||  |||||||| ||||||    
T  54140959 tacattgatttcatccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcatt 54140891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 29755611 - 29755496
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| |||||| ||||| ||||||| |  ||  ||||| |||||||  || | | ||||||||| |||||| ||||| ||||||||||| ||||    
T  29755611 atctacactttgaaaattgaacccacacaaagtagtgaaacatatattgattctattcgataaaagagtgggtgttaaagagaatgttgaaaagtgagtg 29755512  T
Q  357 ttgccagcatttctca 372  Q
    |||| |||||| ||||    
T  29755511 ttgctagcattcctca 29755496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 342
Target Start/End: Original strand, 43657067 - 43657150
Alignment:
Q  260 ctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtg 342  Q
    |||||||| | |||| |||| |||| ||| || |||||||||||||||||||||| || |||| |||||||| |||||| ||||    
T  43657067 ctacactttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtgagtgctagagaaagtg 43657150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 50416510 - 50416475
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  50416510 tgcataaggatttccttatgcaccataaccgcagcc 50416475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 367
Target Start/End: Complemental strand, 52951444 - 52951377
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||  | ||||||||| || ||||||||||| |||||  |||||||| ||||||    
T  52951444 acattgatttcatccaatgatagagtgagtatttgagagagtgttaaaaagagagtgttgctagcatt 52951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 55452085 - 55452156
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagt 329  Q
    ||||||||| | |||||||||| ||||||| || ||||||||||||  ||| ||||||| ||||||||||||    
T  55452085 tctacactttggaaatagaacccacacaaagtggtgggacatacatgtattccatccaataaaagagtgagt 55452156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 344
Target Start/End: Complemental strand, 13639464 - 13639426
Alignment:
Q  306 atttcatccaacaaaagagtgagtgttagagagagtgtt 344  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  13639464 atttcatccaataaaagagtgactgttagagagagtgtt 13639426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 15790466 - 15790532
Alignment:
Q  285 aaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||| || ||||||||||||||| |||||| |||  ||| ||||||||| | |||||||||||||    
T  15790466 aaaatggtgagacatacattgattttatccaataaataagtaagtgttagaaaaagtgttgaaaagt 15790532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 357
Target Start/End: Complemental strand, 42780739 - 42780681
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||| |||||||||||| || ||| ||||||||||||||||||||  |||| ||||||    
T  42780739 tacatggatttcatccaataagagaatgagtgttagagagagtgttagaaagatagtgt 42780681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 46156741 - 46156783
Alignment:
Q  305 gatttcatccaacaaaagagtgagtgttagagagagtgttgaa 347  Q
    ||||||| |||| |||||||||||||||| |||||||||||||    
T  46156741 gatttcacccaataaaagagtgagtgttaaagagagtgttgaa 46156783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 52951475 - 52951537
Alignment:
Q  303 ttgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagca 365  Q
    ||||||||||||||  | |||||||||| ||||||||||||| |||||  |||||||| ||||    
T  52951475 ttgatttcatccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagca 52951537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 368
Target Start/End: Original strand, 55283167 - 55283237
Alignment:
Q  298 atacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcattt 368  Q
    |||||||||||| |||||| || ||| | ||||||| |||||||||| |||||| |||||||  |||||||    
T  55283167 atacattgattttatccaataatagaataagtgttaaagagagtgtttaaaagtgagtgttgttagcattt 55283237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 18722535 - 18722568
Alignment:
Q  283 acaaaatgatgggacatacattgatttcatccaa 316  Q
    |||||||| |||||||||||||||||||||||||    
T  18722535 acaaaatggtgggacatacattgatttcatccaa 18722568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 19012576 - 19012613
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagccct 249  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  19012576 tgcataagaatttccttatgcaccataaccgcagccct 19012613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 37600196 - 37600123
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||||| |||| |||| ||||||||| ||| ||||||||||| | |||||  |||||||| |||||| ||||    
T  37600196 tacattgaattcaaccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcattcctca 37600123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 337
Target Start/End: Complemental strand, 38414767 - 38414678
Alignment:
Q  249 ttatcgtgtatctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagaga 337  Q
    |||||||| ||||||||||  |||||  |||| |||||||||| |||||||||||||||| | ||| ||  | ||||||| |||||||||    
T  38414767 ttatcgtggatctacactttaaaaattaaacccacacaaaatggtgggacatacattgatcttatctaatgagagagtgactgttagaga 38414678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 7640701 - 7640757
Alignment:
Q  294 ggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||| ||||||||||| || | ||  |||||||||| |||||||||||||    
T  7640701 ggacatacattaatttcatccaataagaaagcaagtgttagagtgagtgttgaaaag 7640757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 12974204 - 12974236
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  12974204 tgcataaggatttccttatgcaccataaccgca 12974236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 30624703 - 30624634
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||| |||| || ||| |||||||||||||||||  |||||| | |||||| |||||||| ||||||    
T  30624703 acatacattaattttattcaataaaagagtgagtgttag--agagtgctcaaaagtgagtgttgctagcatt 30624634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 36185919 - 36185951
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  36185919 tgcataaggatttccttatgcaccataaccgca 36185951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 50416578 - 50416610
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  50416578 tgcataaggatttccttatgcaccataaccgca 50416610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 8109066 - 8108952
Alignment:
Q  259 tctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| |||| | |||||| |  |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||||    
T  8109066 tctacactttgaaaattgaacaaacacaaattagtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgt 8108967  T
Q  358 tgccagcatttctca 372  Q
    ||| |||||||||||    
T  8108966 tgctagcatttctca 8108952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 24834688 - 24834575
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| |||||||||| ||||||||||||||||| ||||||| ||||  ||||| ||||||||||||||  |||||| |||||    
T  24834688 tctacactttgaaaattgaacccacacaaaatggtgggacatacattgattccatccaataaaaatgtgagcgttagagagagtgtcaaaaagtgagtgt 24834589  T
Q  358 tgccagcatttctc 371  Q
    ||| ||||||||||    
T  24834588 tgctagcatttctc 24834575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 43771236 - 43771134
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| ||||| | || ||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||| |||||    
T  43771236 tctacactttgaaaattgaacccacacagagtggtgggacatacattgatttcatccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgt 43771137  T
Q  358 tgc 360  Q
    |||    
T  43771136 tgc 43771134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 40991693 - 40991768
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  40991693 tgggacatatattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcatt 40991768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 50571974 - 50571872
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||| ||||| ||| ||||||| ||||||||||||||||| || |||||||| |||| |||||||||||||||||||| | |||    
T  50571974 tctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaagagtaagtgctagagagagtgttgaaaagtgactgt 50571875  T
Q  358 tgc 360  Q
    |||    
T  50571874 tgc 50571872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 20454649 - 20454548
Alignment:
Q  258 atctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| |||||| |||||| |||||| ||   |||||||||||||||| ||| || ||||||||||||| |||||||||||||||||||| ||||    
T  20454649 atctacactttgaaaattgaaccaacacaaagtgt--ggacatacattgattttatctaataaaagagtgagtgctagagagagtgttgaaaagtaagtg 20454552  T
Q  357 ttgc 360  Q
    ||||    
T  20454551 ttgc 20454548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 50164505 - 50164405
Alignment:
Q  259 tctacacttagaaaatagaaccac-acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | |||||||| ||||| |||||||||||| |||||| ||| ||||||||| ||||||||||||| |||||| |||||    
T  50164505 tctacactttgaaaattgaacccccacaaaatggtgggagatacattgattttatccaataaatgagtgagtgctagagagagtgttaaaaagtgagtgt 50164406  T
Q  358 t 358  Q
    |    
T  50164405 t 50164405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 367
Target Start/End: Original strand, 33653578 - 33653668
Alignment:
Q  277 aaccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||| ||||||||| |||||||||||||||||||||| || ||| |||||| |  |||||||||||||||||| | |||||||| ||||||    
T  33653578 aaccccacaaaatggtgggacatacattgatttcatcaaataaatgagtgattaatagagagagtgttgaaaactgagtgttgctagcatt 33653668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 371
Target Start/End: Complemental strand, 39016746 - 39016660
Alignment:
Q  285 aaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||||||| |||||||||| |||||  | |||||| ||||||||||    
T  39016746 aaaatggtgggacatacattgatttcatccaataaaatagtaagtgttatagagagtgtttaaaagagaatgttgctagcatttctc 39016660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 39471267 - 39471153
Alignment:
Q  259 tctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| ||| || |||||| |||||| || |||||||||||||||||||||| || ||||||||  |||||| ||||||| || |||||| |||||    
T  39471267 tctacactttgaagattgaaccaacacaaagtggtgggacatacattgatttcatctaataaaagagttggtgttaaagagagtatttaaaagtgagtgt 39471168  T
Q  358 tgccagcatttctca 372  Q
    ||| |||||| ||||    
T  39471167 tgctagcattcctca 39471153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 358
Target Start/End: Complemental strand, 49242281 - 49242180
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||| | |||||| ||||| ||||||| |||||||||||| |||||||||||||||  ||| ||||| ||||||| |||||||| |||||| ||||    
T  49242281 atctacacattgaaaattgaacccacacaaagtgatgggacatatattgatttcatccaattaaaaagtgactgttagatagagtgttcaaaagtgagtg 49242182  T
Q  357 tt 358  Q
    ||    
T  49242181 tt 49242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 754673 - 754749
Alignment:
Q  281 acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||| || |||||||||| |||| ||||||||| |||| ||||||||||||||| ||||||||||||| |||||    
T  754673 acacaaagtggtgggacatactttgagttcatccaataaaaaagtgagtgttagagaaagtgttgaaaagtaagtgt 754749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 722244 - 722177
Alignment:
Q  281 acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaa 348  Q
    ||||||| || |||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||    
T  722244 acacaaagtggtgggacatactttgatttcatccaataaaaaagtgagtgctagagagagtgttgaaa 722177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 360
Target Start/End: Original strand, 34129473 - 34129572
Alignment:
Q  262 acacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||| |||||| |||| |||||||| || ||||| |||||||||| |||||||| | ||||||||||| |||||||||| ||||||||| | ||||||    
T  34129473 acactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaatagaagagtgagtgctagagagagttttgaaaagtgaatgttgc 34129572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 373
Target Start/End: Complemental strand, 37315636 - 37315558
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctcac 373  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||||||| | |||||  |||||||| ||||||||||||    
T  37315636 tgggacatacattgatttcacccaa---aagagtgagtgttagagagagtgctcaaaagagagtgttgctagcatttctcac 37315558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 50481610 - 50481709
Alignment:
Q  254 gtgtatctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagtt 352  Q
    |||| ||||||||| |||||||||| ||| ||||| || || ||||||| |||||||||||||| |||||||||||||  | | ||||||||||||||||    
T  50481610 gtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtgagtgagaaaaagagtgttgaaaagtt 50481709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 43958250 - 43958148
Alignment:
Q  269 gaaaatagaaccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcattt 368  Q
    ||||||||| ||||| |||||| |||||||||||||||||  || ||| |||||||||| || |||||||| |||| |||| | |||||||| | |||||    
T  43958250 gaaaatagatccacataaaatggtgggacatacattgattctattcaataaaagagtgaatgctagagagaatgttaaaaactgagtgttgctaacattt 43958151  T
Q  369 ctc 371  Q
    |||    
T  43958150 ctc 43958148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 349
Target Start/End: Complemental strand, 47009304 - 47009208
Alignment:
Q  254 gtgtatctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    |||||||||||||| |||||| |||| ||||||||  | || |||| ||||| |||| |||||| ||||||||||||| |||| |||||||||||||    
T  47009304 gtgtatctacactttgaaaattgaactcacacaaagcggtgagacaaacattaattttatccaataaaagagtgagtgctagaaagagtgttgaaaa 47009208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 359
Target Start/End: Original strand, 47237845 - 47237912
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||||| ||||||||||||||| |||||||||| || ||||||||||||| |||||  |||||||    
T  47237845 tgggacatatattgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttg 47237912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 16178697 - 16178743
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  16178697 tacattgatttcatccaataaaagagtgagagttagagagagtgttg 16178743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 20225411 - 20225518
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| | |||||||||| ||| ||| || |||||||| ||| |||| ||||||| ||||||||||||| |  |||||||||| |||||| |||||    
T  20225411 tctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgt 20225508  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  20225509 tgctagcatt 20225518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 22592402 - 22592312
Alignment:
Q  271 aaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||||||| ||||||| || ||||||| ||||| ||||||||||| |||||||||||||  ||||||| |||| |||||| || |||||    
T  22592402 aaatagaacctacacaaagtggtgggacaaacatttatttcatccaataaaagagtgagtgccagagagaatgttcaaaagtgagcgttgc 22592312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 21776951 - 21777000
Alignment:
Q  294 ggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  21776951 ggacatacattgattttatccaataaaagagtgaatgttagagagagtgt 21777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 24938485 - 24938558
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgt 331  Q
    |||||||||  ||||| ||| ||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  24938485 tctacactttaaaaattgaatccaaacaaaatggtgggacatacattgattacatccaataaaagagtgagtgt 24938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 2088734 - 2088818
Alignment:
Q  258 atctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagt 341  Q
    |||||||||| | |||| ||| ||||| ||| || ||||||||||||||||||||  |||  |||||||||||||||||||||||    
T  2088734 atctacactttggaaatggaatccacataaagtggtgggacatacattgatttcactcaattaaagagtgagtgttagagagagt 2088818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 25719204 - 25719268
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    ||||| ||| || |||||||||||||||||||| |||| || |||||||||||| ||||||||||    
T  25719204 ccacataaagtggtgggacatacattgatttcaaccaataagagagtgagtgtttgagagagtgt 25719268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 24106750 - 24106809
Alignment:
Q  291 atgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||| ||||  |||||||||| || |||||| |||||||||||||||||||||||    
T  24106750 atgggacatgcattagtttcatccaataagagagtgggtgttagagagagtgttgaaaag 24106809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 27654553 - 27654495
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    |||||||||||||  ||| |||||| || ||| ||||||||||||||||||||||||||    
T  27654553 tgggacatacattagttttatccaataagagaatgagtgttagagagagtgttgaaaag 27654495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 48339410 - 48339512
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||| ||| |||||| ||||| ||||||| || ||| ||||||||||||||  ||||| || ||||||||||||| |||||||| | || ||| |||||    
T  48339410 tctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtgagtgttaaagagagtgctcaatagtgagtgt 48339509  T
Q  358 tgc 360  Q
    |||    
T  48339510 tgc 48339512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 29699587 - 29699522
Alignment:
Q  271 aaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttaga 335  Q
    ||||||||||| |||||| || ||||||||  ||||||||||||||| ||||||||||||| ||||    
T  29699587 aaatagaaccaacacaaagtggtgggacatgtattgatttcatccaataaaagagtgagtgctaga 29699522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 30867001 - 30867086
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtg 342  Q
    |||||||||| |||||| ||||| ||| ||| || ||||||||||||| |||| |||||| |||| |||||||| |||||| ||||    
T  30867001 atctacactttgaaaatggaacccacataaagtggtgggacatacattaatttaatccaataaaaaagtgagtgctagagatagtg 30867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 42862494 - 42862575
Alignment:
Q  262 acacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtg 342  Q
    |||||| |||||| ||||| ||| ||| || |||||||||||||||||||| |||| |||| |||||||| |||||| ||||    
T  42862494 acactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagaaagtg 42862575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 51206157 - 51206218
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||| | |||||  ||||||||    
T  51206157 tacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgc 51206218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 26361378 - 26361446
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtg 326  Q
    ||||||||| ||| || ||||| |||||||||| |||| |||||||||| ||||||||| |||||||||    
T  26361378 tctacactttgaatattgaacccacacaaaatggtgggtcatacattgacttcatccaataaaagagtg 26361446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 33996042 - 33996106
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||||||||||| ||  || |||||||||| |||||||||| |||||||||||  |||||||    
T  33996042 gacatacattgatttgatttaataaaagagtgaatgttagagagtgtgttgaaaagagagtgttg 33996106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 40812103 - 40812039
Alignment:
Q  302 attgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcat 366  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| ||||   |||||||| |||||    
T  40812103 attgatttcacccaataaaagagtgagtgctagagagagtgttcaaaaaagagtgttgctagcat 40812039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 359
Target Start/End: Original strand, 46242024 - 46242113
Alignment:
Q  269 gaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    |||||| ||||| |||||||||| ||||||||||| ||||||||||| | ||||| ||||  |||  |||||||||| |||||| |||||||    
T  46242024 gaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaaagtgtga--gttctagagagtgttaaaaagtgagtgttg 46242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 53870998 - 53871042
Alignment:
Q  323 agtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||    
T  53870998 agtgagtgttagagagagtgttggaaagtgagtgttgctagcatt 53871042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 6841851 - 6841816
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6841851 tgcataaggatttccttatgcaccataaccgcagcc 6841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 8165792 - 8165757
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8165792 tgcataaggatttccttatgcaccataaccgcagcc 8165757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 370
Target Start/End: Original strand, 10169737 - 10169825
Alignment:
Q  280 cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttct 370  Q
    |||||||| || | ||||||| ||||||||||||||| || ||||||| | ||  ||||||||||||||||| | |||||  |||||||||    
T  10169737 cacacaaagtggtaggacatatattgatttcatccaataatagagtgaatatt--agagagtgttgaaaagtgaatgttgttagcatttct 10169825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 13070049 - 13069971
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagag 338  Q
    |||||||| |||||| ||||| ||| ||| || ||| |||||||||||||||| |||| ||||||||||||| |||||||    
T  13070049 ctacactttgaaaatggaacccacataaagtggtggaacatacattgatttca-ccaataaaagagtgagtgctagagag 13069971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 21098146 - 21098177
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgc 243  Q
    ||||||||||||||||||||||||||||||||    
T  21098146 tgcataaggatttccttatacaccataaccgc 21098177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 30779373 - 30779338
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30779373 tgcataaggatttccttatgcaccataaccgcagcc 30779338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 33883324 - 33883289
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33883324 tgcataaggatttccttatgcaccataaccgcagcc 33883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 43124607 - 43124654
Alignment:
Q  281 acacaaaatgatgggacatacattgatttcatccaacaaaagagtgag 328  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||    
T  43124607 acacaaaatggtgggacatacattgatttcatccattaaatgagtgag 43124654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 51206131 - 51206081
Alignment:
Q  280 cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtg 330  Q
    |||| ||| ||||||||||||||||||||||||| || ||| |||||||||    
T  51206131 cacataaagtgatgggacatacattgatttcatctaataaatgagtgagtg 51206081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 51904717 - 51904787
Alignment:
Q  289 tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||| ||||||||||||||||| || || ||| ||||||  | |||||||||||||||| ||| ||||    
T  51904717 tgatgggtcatacattgatttcatctaataagagaatgagtgacaaagagagtgttgaaaagatagagttg 51904787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 1492912 - 1492871
Alignment:
Q  196 tggggtgcggttatgttgcataaggatttccttatacaccat 237  Q
    |||| |||||||||| ||||||||||||||||||| ||||||    
T  1492912 tgggctgcggttatggtgcataaggatttccttatgcaccat 1492871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 17109747 - 17109714
Alignment:
Q  214 cataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||| ||||||||||||||||    
T  17109747 cataaggatttccttatgcaccataaccgcagcc 17109714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 241
Target Start/End: Complemental strand, 27865659 - 27865630
Alignment:
Q  212 tgcataaggatttccttatacaccataacc 241  Q
    ||||||||||||||||||||||||||||||    
T  27865659 tgcataaggatttccttatacaccataacc 27865630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 50879554 - 50879473
Alignment:
Q  271 aaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||||||| ||| |||||| |||||||| |||  ||| ||| ||| ||||||||||||| |||| |||||||| ||||||    
T  50879554 aaatagaacccacataaaatggtgggacatgcatgaattccattcaataaaagagtgagtgctagaaagagtgttcaaaagt 50879473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 1492702 - 1492670
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  1492702 tgcataaggatttccttatgcaccataaccgca 1492670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 2860988 - 2860916
Alignment:
Q  258 atctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagt 329  Q
    |||||||||| |||||| ||| ||||| |||  ||||| | ||||||| |||||||||||||||| |||||||    
T  2860988 atctacactttgaaaattgaatccacagaaagggatggaaaatacattaatttcatccaacaaaaaagtgagt 2860916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 12722767 - 12722735
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  12722767 tgcataaggatttccttatgcaccataaccgca 12722735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 17109932 - 17109964
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  17109932 tgcataaggatttccttatgcaccataaccgca 17109964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 21995700 - 21995668
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  21995700 tgcataaggatttccttatgcaccataaccgca 21995668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 31763122 - 31763154
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  31763122 tgcataaggatttccttatgcaccataaccgca 31763154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 36924271 - 36924239
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  36924271 tgcataaggatttccttatgcaccataaccgca 36924239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 39016777 - 39016849
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||||||||| | | || |||||||| |||| ||||||||||||| |||||  |||||||| | ||||||||    
T  39016777 tacattgattttacctaataaaagagtaagtgctagagagagtgttcaaaagagagtgttgctaacatttctc 39016849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 40615291 - 40615247
Alignment:
Q  305 gatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    |||||||||||| || | ||||| |||||||||||||||||||||    
T  40615291 gatttcatccaataagatagtgaatgttagagagagtgttgaaaa 40615247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 44832552 - 44832496
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttaga 335  Q
    ||||| |||||| ||||||||||||| |||||| |||| |||| |||||||| ||||    
T  44832552 ccacataaaatggtgggacatacattaatttcacccaataaaaaagtgagtgataga 44832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 52671913 - 52671869
Alignment:
Q  285 aaaatgatgggacatacattgatttcatccaacaaaagagtgagt 329  Q
    |||||| ||||||||||||| ||||||||||| |||| |||||||    
T  52671913 aaaatggtgggacatacatttatttcatccaataaaaaagtgagt 52671869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 9470191 - 9470078
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||| |    
T  9470191 tctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgttagagagagcgttgaaaaatgagtat 9470092  T
Q  358 tgccagcatttctc 371  Q
    ||| ||||||||||    
T  9470091 tgctagcatttctc 9470078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 45554643 - 45554568
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  45554643 tgggacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 45554568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 12989301 - 12989187
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| | |||||||| ||| ||||| || |||||||||||||||||||||||||  ||||||||||||  | ||||||||||||||||| |||||    
T  12989301 tctacacttcggaaatagaatccatacaaagtggtgggacatacattgatttcatccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgt 12989202  T
Q  358 tgccagcatttctca 372  Q
    ||| |||||| ||||    
T  12989201 tgctagcattcctca 12989187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 259 - 370
Target Start/End: Original strand, 6980190 - 6980302
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    |||| |||| |||||| |||| |||||||| || | | |||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| | |||    
T  6980190 tctatactttgaaaattgaactcacacaaagtggtagaacataccttgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgt 6980289  T
Q  358 tgccagcatttct 370  Q
    ||| |||||||||    
T  6980290 tgctagcatttct 6980302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 293 - 367
Target Start/End: Complemental strand, 3804659 - 3804585
Alignment:
Q  293 gggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||| ||||| || ||||||    
T  3804659 gggacatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgtagctagcatt 3804585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 11539536 - 11539419
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacat--tgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttag 354  Q
    |||||||||| ||||||||||| |||||||| |||||| ||||||||  ||||||||||||| ||||||||||||| |||| |||||||| |||| | ||    
T  11539536 atctacactttgaaaatagaactcacacaaagtgatggaacatacatattgatttcatccaataaaagagtgagtgctagaaagagtgttcaaaaatgag 11539437  T
Q  355 tgttgccagcatttctca 372  Q
    |||||  |||||| ||||    
T  11539436 tgttgttagcattcctca 11539419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 18511283 - 18511393
Alignment:
Q  263 cacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgcc 361  Q
    ||||| |||||| ||||| ||| |||||  |||||||||||||||||| |||||| ||||||||||||| ||| ||||||||| |||||| ||||||||     
T  18511283 cactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgatagtgagagtgttaaaaagtgagtgttgct 18511382  T
Q  362 agcatttctca 372  Q
    |||||| ||||    
T  18511383 agcattcctca 18511393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 26767855 - 26767945
Alignment:
Q  282 cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||| || ||||||||||||||||||||||||  |||||||| |||| |||||||| ||||||||||| |||||||| |||||| ||||    
T  26767855 cacaaagtggtgggacatacattgatttcatccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttgctagcattcctca 26767945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 15509025 - 15508922
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| | |||| ||||| ||| |||||| ||||||||||||||||||||  ||| |||||||||||||||||| |||||||| |||||  ||||    
T  15509025 atctacactttggaaatggaacccacaaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaagagagtg 15508926  T
Q  357 ttgc 360  Q
    ||||    
T  15508925 ttgc 15508922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 44274345 - 44274232
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| |||| | ||||| ||||||| || |||||||||||||||||| ||||||  ||||||||| |||||||||||||| |  ||||| ||||    
T  44274345 atctacactttgaaagttgaacccacacaaagtggtgggacatacattgattttatccaatgaaagagtgaatgttagagagagtgct-caaagtgagtg 44274247  T
Q  357 ttgccagcatttctc 371  Q
    |||| ||||||||||    
T  44274246 ttgctagcatttctc 44274232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 42182978 - 42182890
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||| ||| || |||||||||||||||||||| |||| ||||||||||||| ||||||||||| | |||||  |||||||| ||||||    
T  42182978 ccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 42182890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 359
Target Start/End: Complemental strand, 24497302 - 24497201
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| ||||||| || |||||||||||||||| |||||||||  |||||||||| |||| || || ||||| |||||||| | |||||| |||||    
T  24497302 tctacactttgaaaataaaatccacacaaaatgatggaacatacattagtttcatccaataaaaaagcgactgttaaagagagtggtcaaaagtgagtgt 24497203  T
Q  358 tg 359  Q
    ||    
T  24497202 tg 24497201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 372
Target Start/End: Original strand, 28898128 - 28898221
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||| ||| || |||||||||||||||||||| |||| ||||||||||||| ||||||||||| | ||||   |||||||| |||||| ||||    
T  28898128 ccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaaaagagtgttgctagcattcctca 28898221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 30718397 - 30718497
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| ||||||| || |||||||||||||||| ||||| || |||||||||||| ||||||||||||  |||||||| |||| |||| | |||||    
T  30718397 tctacactttgaaaatacaatccacacaaaatgatgg-acatatatcgatttcatccaataaaagagtgagtactagagagaatgtttaaaattgagtgt 30718495  T
Q  358 tg 359  Q
    ||    
T  30718496 tg 30718497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 351
Target Start/End: Complemental strand, 38464273 - 38464180
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||||| |||||| ||||| || |||| ||||| |||||||||||||||||| ||| |||| ||| | ||| |||||||||||||||||||    
T  38464273 tctacactttgaaaattgaacccacgcaaagtgatgagacatacattgatttcatacaataaaaaagtaattgtcagagagagtgttgaaaagt 38464180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 25666700 - 25666764
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    |||||||||||||||||||| | |||||||||| |||| |||||||||||||||| | |||||||    
T  25666700 gacatacattgatttcatccgataaaagagtgaatgtttgagagagtgttgaaaaatgagtgttg 25666764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 8009604 - 8009521
Alignment:
Q  277 aaccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||| ||| || || ||||||  ||||||||||||||||||| ||||||||||||| |||||||| |||||  ||||||||    
T  8009604 aaccacataaagtggtgagacatatgttgatttcatccaacaaaaaagtgagtgttagaaagagtgttcaaaagagagtgttgc 8009521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 36471945 - 36472008
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    ||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||| ||||||    
T  36471945 gacatactttgatttcatccaataagagattgagtgtcagagagagtgttgaaaagtgagtgtt 36472008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 16719528 - 16719610
Alignment:
Q  286 aaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcattt 368  Q
    ||||| ||||| |||||||||||||||| || ||||||||  ||| || ||| ||||||||||||| |||||||| |||||||    
T  16719528 aaatggtgggatatacattgatttcatctaataaaagagtatgtgctaaagacagtgttgaaaagtgagtgttgctagcattt 16719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 34142209 - 34142311
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| ||||||| |  || |||||||||  ||||||||||| |||| ||||| |||| |||||| ||||||||||| |||||    
T  34142209 tctacactttgaaaattgaacccacacaaagtagtgagacatacatgaatttcatccaataaaaaagtgaatgtttgagagattgttgaaaagtaagtgt 34142308  T
Q  358 tgc 360  Q
    |||    
T  34142309 tgc 34142311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 372
Target Start/End: Complemental strand, 37228588 - 37228494
Alignment:
Q  279 ccacacaaaatgatgggacatacattgattt-catccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||| ||| || ||||||||||||| |||| || |||| ||||||||||||| ||||||||||| | |||||  |||||||| |||||||||||    
T  37228588 ccacataaagtggtgggacatacattaattttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatttctca 37228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 10981616 - 10981535
Alignment:
Q  271 aaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||||||| ||||||| || |||||||||||||  |||||| ||| | || |||||||||||||||||||||| ||||||    
T  10981616 aaatagaacccacacaaagtggtgggacatacatttttttcattcaatagaaaagtgagtgttagagagagtgttcaaaagt 10981535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 1107114 - 1107046
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||||||||||||||||| |||| ||||||||| ||| ||||||||||| | |||||  ||||||||    
T  1107114 tgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgc 1107046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 1110287 - 1110227
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagaga 339  Q
    ||||| ||| || ||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  1110287 ccacataaagtggtgggacatacattgatttcactcaataaaagagtgagtgttagagaga 1110227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 42579758 - 42579814
Alignment:
Q  289 tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    ||||| || ||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  42579758 tgatgagatatatattgatttcatccaataaaagagtgagtgtttgagagagtgttg 42579814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 4602962 - 4603049
Alignment:
Q  283 acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttct 370  Q
    ||||| |||||| ||||| ||||||||||||||| ||||||||||||   | || ||| |||||||||| |||||||| | |||||||    
T  4602962 acaaagtgatggaacatatattgatttcatccaataaaagagtgagtaccaaagggagcgttgaaaagtgagtgttgctaacatttct 4603049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 22596334 - 22596299
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  22596334 tgcataaggatttccttatacaccataaccgcagcc 22596299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 41805880 - 41805931
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||| |||||    
T  41805880 tgggacatacattgattttatccaataaaagagtgagtgttaaagaaagtgt 41805931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 343
Target Start/End: Original strand, 43404414 - 43404461
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  43404414 acatacattgattttatccaacaaaaaagtgagtgttaaagagagtgt 43404461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 2122867 - 2122797
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcat 366  Q
    ||||||||||||||||||| |  ||||||||| || |||||| ||| ||||||||| |||||||| |||||    
T  2122867 acatacattgatttcatcctatgaaagagtgattgatagagaaagtattgaaaagtgagtgttgctagcat 2122797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 4964764 - 4964826
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagt 341  Q
    ||||| ||| || |||||||||||||||||||| |||| |||| |||||||| ||||||||||    
T  4964764 ccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagagagt 4964826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 31494282 - 31494211
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagca 365  Q
    |||||||||||||  |||||||||| || ||||||||||||||  ||||||||||||||  |||||||| ||||    
T  31494282 tgggacatacattattttcatccaataagagagtgagtgttag--agagtgttgaaaagagagtgttgctagca 31494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 43400209 - 43400151
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||| |  |||||||||| || | ||||||||||||||||||||||||||||    
T  43400209 tgggacatacactagtttcatccaataagaaagtgagtgttagagagagtgttgaaaag 43400151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 11729715 - 11729775
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||||||||| ||| |||||| | | ||||||| ||||||||||||||| ||||||||    
T  11729715 acattgatttcattcaataaaagaataaatgttagaaagagtgttgaaaagtgagtgttgc 11729775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 359
Target Start/End: Complemental strand, 17188133 - 17188076
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||||||||||||| |||| |||||||| ||||||||  |||||||||| |||||||    
T  17188133 acattgatttcatccaataaaatagtgagtgatagagaga--gttgaaaagtgagtgttg 17188076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 28898103 - 28898035
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||| ||||||||||||| || |||||||  | |||||  |||||||| ||||||    
T  28898103 tacattgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcatt 28898035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 37719903 - 37719835
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| | |||||  | |||||| ||||||    
T  37719903 tacattgatttcatccaataaaagagtgagtgctagaaagagtgctcaaaagagaatgttgctagcatt 37719835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 12449084 - 12449049
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12449084 tgcataaggatttccttatgcaccataaccgcagcc 12449049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 31395550 - 31395617
Alignment:
Q  293 gggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||||||||||||||| |||| ||| ||||||||| || |||||||| | |||||  ||||||||    
T  31395550 gggacatacattgatttcacccaataaaggagtgagtgctaaagagagtgctcaaaagagagtgttgc 31395617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 33678224 - 33678299
Alignment:
Q  297 catacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||||||||||||| |||  ||||| | ||||||| | |||||||| |||||| |||||||| |||||| ||||    
T  33678224 catacattgatttcattcaattaaagaataagtgttataaagagtgttcaaaagtgagtgttgctagcattcctca 33678299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 41546133 - 41546211
Alignment:
Q  293 gggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||||| ||||||| ||||||| || ||||||| |||| |||||||||||||||||  |||| ||| |||||| ||||    
T  41546133 gggacatatattgatt-catccaataagagagtgaatgtttgagagagtgttgaaaagagagtgatgctagcattcctca 41546211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 4964739 - 4964669
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttc 369  Q
    ||||||||| | |||||| ||||||||||||| |||||||||| || |||||  ||| |||| ||||||||    
T  4964739 tacattgatcttatccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatttc 4964669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 17505921 - 17505979
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    ||||||||||||| |||  | ||| |||||||| ||||||||||||||||| |||||||    
T  17505921 acattgatttcattcaattagagaatgagtgtttgagagagtgttgaaaagatagtgtt 17505979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 235
Target Start/End: Complemental strand, 19246908 - 19246874
Alignment:
Q  201 tgcggttatgttgcataaggatttccttatacacc 235  Q
    |||||||||| ||||||||||||||||||||||||    
T  19246908 tgcggttatggtgcataaggatttccttatacacc 19246874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 19639172 - 19639110
Alignment:
Q  289 tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||| ||||||||||||||||||| || |||| ||||| || | ||||||||||| ||||||    
T  19639172 tgatgagacatacattgatttcatctaataaaatagtgaatgctggagagagtgttaaaaagt 19639110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 19837765 - 19837703
Alignment:
Q  289 tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||| ||||||||||||||||||| || |||| ||||| || | ||||||||||| ||||||    
T  19837765 tgatgagacatacattgatttcatctaataaaatagtgaatgctggagagagtgttaaaaagt 19837703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 351
Target Start/End: Original strand, 25730520 - 25730602
Alignment:
Q  270 aaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||||||| ||| || ||| || |||||||||  ||| ||||||| |||| ||||||||||||| |||||||| ||||||    
T  25730520 aaaatagaacccacataatatggtgagacatacatgtattccatccaataaaaaagtgagtgttagaaagagtgttcaaaagt 25730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 37078036 - 37077978
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||| | ||| ||||||| || |||||| |||||||||| ||||||||||||    
T  37078036 tgggacatacactaattacatccaataagagagtgtgtgttagagaaagtgttgaaaag 37077978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 19193545 - 19193496
Alignment:
Q  323 agtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||||||| |||||||||||||||||  |||||||| |||||| ||||    
T  19193545 agtgagtgttggagagagtgttgaaaagagagtgttgctagcattcctca 19193496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 20661426 - 20661393
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcag 245  Q
    ||||||||||||||||||| ||||||||||||||    
T  20661426 tgcataaggatttccttatgcaccataaccgcag 20661393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 27968980 - 27968915
Alignment:
Q  306 atttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    |||||| |||| ||||||||||||| ||||||||||  | |||||  |||||||| ||||||||||    
T  27968980 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatttctc 27968915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 28091607 - 28091672
Alignment:
Q  306 atttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    |||||| |||| ||||||||||||| ||||||||||  | |||||  |||||||| ||||||||||    
T  28091607 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatttctc 28091672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 28101839 - 28101904
Alignment:
Q  306 atttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    |||||| |||| ||||||||||||| ||||||||||  | |||||  |||||||| ||||||||||    
T  28101839 atttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatttctc 28101904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 15253034 - 15253066
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    |||||||||||||| ||||||||||||||||||    
T  15253034 tgcataaggatttcgttatacaccataaccgca 15253066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 24183611 - 24183643
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  24183611 tgcataaggatttccttatgcaccataaccgca 24183643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 25575353 - 25575321
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  25575353 tgcataaggatttccttatgcaccataaccgca 25575321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 29795877 - 29795813
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||||||||||||| | | |||||| |||||| || ||| ||||| ||||||| ||||||||    
T  29795877 acatacattgatttcattcgataaaagaatgagtgataaagaaagtgtagaaaagtaagtgttgc 29795813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 30706397 - 30706449
Alignment:
Q  313 ccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagca 365  Q
    ||||||| | |||||||||| |||||||||||||||||  |||||||| ||||    
T  30706397 ccaacaataaagtgagtgtttgagagagtgttgaaaagagagtgttgctagca 30706449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 31783823 - 31783791
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  31783823 tgcataaggatttccttatgcaccataaccgca 31783791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 31783999 - 31784031
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  31783999 tgcataaggatttccttatgcaccataaccgca 31784031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 40535098 - 40535174
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||| |||||||| | |||| ||||||||||||||||||||| ||| |  |||| ||||||||  |||||| ||||    
T  40535098 acatatattgattttacccaataaaagagtgagtgttagagagggtgctcgaaagatagtgttgttagcattcctca 40535174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 32072207 - 32072095
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    |||||||||  ||||| ||||| ||||||| || ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| | |||    
T  32072207 tctacactttaaaaattgaacccacacaaagtggtgggacatacattcatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgt 32072108  T
Q  358 tgccagcatttct 370  Q
    ||| |||||||||    
T  32072107 tgctagcatttct 32072095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 258 - 367
Target Start/End: Original strand, 1977242 - 1977352
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| |||||| ||||| ||||||| || | ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||     
T  1977242 atctacactttgaaaattgaacccacacaaagtggttggacatacattgatttcatccaacagaagagtgagtgctagagagagtgttaaaaagtgagta 1977341  T
Q  357 ttgccagcatt 367  Q
    |||| ||||||    
T  1977342 ttgctagcatt 1977352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 372
Target Start/End: Original strand, 9952829 - 9952941
Alignment:
Q  261 tacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||| |||||| |||| |||||||| || |||||||| |||||||||||||||| |||| | |||||| |||||||||||||||||||| | ||||     
T  9952829 tacactttgaaaattgaactcacacaaagtggtgggacatgcattgatttcatccaataaaaaaatgagtgctagagagagtgttgaaaagtaaatgtta 9952928  T
Q  360 ccagcatttctca 372  Q
    | |||||||||||    
T  9952929 ctagcatttctca 9952941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 28413939 - 28414040
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    |||| |||| |||||| |||| |||||||| || |||||||||||||||||||||| || |||| |||||| | |||||||||||||||||||| |||||    
T  28413939 tctatactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataaaaaagtgagcgctagagagagtgttgaaaagtgagtgt 28414038  T
Q  358 tg 359  Q
    ||    
T  28414039 tg 28414040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 17499302 - 17499390
Alignment:
Q  258 atctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||||||||| |||||| |||||| ||||||||| ||||||||| ||||||||||||||| ||||||  ||||| ||||||||||||||    
T  17499302 atctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcatccaataaaagatagagtgctagagagagtgttg 17499390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 367
Target Start/End: Complemental strand, 5979987 - 5979881
Alignment:
Q  262 acacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||| |||||| ||||| ||||||| || |||||||||||||||| |||||||| | |||||||  |  |||||||||||||||||||| ||||||||    
T  5979987 acactttgaaaattgaacccacacaaagtggtgggacatacattgatctcatccaatagaagagtgtctactagagagagtgttgaaaagtaagtgttgc 5979888  T
Q  361 cagcatt 367  Q
     ||||||    
T  5979887 tagcatt 5979881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 8903962 - 8903860
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| ||||||| || |||||||||||||||||||||| || |||  |||||||  |||||||||||||||||| | |||||    
T  8903962 tctacactttgaaaattgaaccgacacaaagtggtgggacatacattgatttcatcaaataaacaagtgagtactagagagagtgttgaaaaatgagtgt 8903863  T
Q  358 tgc 360  Q
    |||    
T  8903862 tgc 8903860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 6387650 - 6387560
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||| |||||| |||||||||||||||||| |||||| |||||||||||||||||  |||||||  |||||  |||||||| ||||||||||    
T  6387650 ccacataaaatggtgggacatacattgattttatccaataaaagagtgagtgttag--agagtgtccaaaagagagtgttgctagcatttctc 6387560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 8914881 - 8914772
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||  ||||| ||||||| || |||||||||||||| ||| ||||||  |||||||||||||||||||||| | | |||||| |||||    
T  8914881 tctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttttatccaatgaaagagtgagtgttagagagagcgctcaaaagtgagtgt 8914782  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  8914781 tgctagcatt 8914772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 16983504 - 16983395
Alignment:
Q  259 tctacacttagaaaatagaaccac-acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | ||||| |||||||||||| | |||||| |||||| |||  |||||||| |||| ||||||||||||||| |||||    
T  16983504 tctacactttgaaaattgaacccccacaaagtgatgggacataaaatgattttatccaataaatcagtgagtgctagatagagtgttgaaaagtgagtgt 16983405  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  16983404 tgctagcatt 16983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 34861262 - 34861348
Alignment:
Q  264 acttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||| |||||| ||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||    
T  34861262 actttgaaaattgaacctacacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgct--agagagtgttgaaaagt 34861348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 41727506 - 41727426
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||||||||||||||| ||| ||||||||||||| || || |||||||||| |||||| ||||||| ||||||| ||||    
T  41727506 tgggacatacattgattttatctaacaaaagagtgattgctaaagagagtgttcaaaagtgagtgttgtcagcattcctca 41727426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 13407396 - 13407479
Alignment:
Q  261 tacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    ||||||| |||||||||||| ||  |||||| |||||||||||||||||| |||||| |||| ||| |||||||||||||||||    
T  13407396 tacactttgaaaatagaacccacttaaaatggtgggacatacattgattttatccaataaaaaagttagtgttagagagagtgt 13407479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 35151823 - 35151901
Alignment:
Q  282 cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| | || || | |||||||| |||||| ||||||||    
T  35151823 cacaaaatggtgggacatacattgatttcatccaataaaagagtaaatgctaaaaagagtgttaaaaagtgagtgttgc 35151901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 342
Target Start/End: Complemental strand, 35689588 - 35689506
Alignment:
Q  261 tacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtg 342  Q
    ||||||| |||||| |||| |||| ||| || ||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  35689588 tacactttgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaaagtgagtgctagagagagtg 35689506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 31301226 - 31301153
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtg 330  Q
    |||||||| | ||||||||||| |||||||| || ||| ||||||||||||||||||||| |||||||||||||    
T  31301226 atctacacattgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaagagtgagtg 31301153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 357
Target Start/End: Original strand, 11962750 - 11962850
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| |||||| ||||| ||| |||||| ||||| |||| ||||||| || ||| |||||||||||| ||| |||| |||||||||||| ||||    
T  11962750 atctacactttgaaaattgaacctacataaaatggtgggatatactttgattttattcaataaaagagtgagtattaaagagcgtgttgaaaagtgagtg 11962849  T
Q  357 t 357  Q
    |    
T  11962850 t 11962850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 13856506 - 13856558
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  13856506 tacattgatttcatccaataaaagagtgggtgttagagagagtgttgagaagt 13856558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 23685242 - 23685132
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| | ||||||||| | || ||| || ||||||||||||||||||||||||| |||| |||||||| |  |||||||||  |||||| | ||    
T  23685242 atctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcttaagagagtgtgcaaaagtgaatg 23685143  T
Q  357 ttgccagcatt 367  Q
    |||| ||||||    
T  23685142 ttgctagcatt 23685132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 24055995 - 24056097
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||  ||||||| || ||||||||||||| ||||||||  | ||||||| ||||| || |||||| |||||||||| |||||    
T  24055995 tctacactttgaaaattgaacttacacaaagtggtgggacatacattaatttcatctgataaaagagcgagtgctaaagagagcgttgaaaagtgagtgt 24056094  T
Q  358 tgc 360  Q
    |||    
T  24056095 tgc 24056097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 36804930 - 36804996
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||||||||||| ||||||||||||||||| ||||||| || | ||| ||| |||||||||||||||    
T  36804930 ccacacaaaatggtgggacatacattgattccatccaataatatagttagtattagagagagtgttg 36804996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 16441908 - 16441969
Alignment:
Q  289 tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    |||||||||  ||||||||||||||||  |||||||||||||||| ||| ||||||||||||    
T  16441908 tgatgggacccacattgatttcatccagtaaaagagtgagtgttatagatagtgttgaaaag 16441969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 12212190 - 12212130
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||||||||| |||| |||||||||| ||||||||||| ||||||||||  ||||||||    
T  12212190 acattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgc 12212130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 12456618 - 12456558
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    |||||||||||| |||| |||||||||| ||||||||||| ||||||||||  ||||||||    
T  12456618 acattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgc 12456558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 44709348 - 44709296
Alignment:
Q  291 atgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    ||||||| |||||||||||||  ||| ||||||||||||||||||||||||||    
T  44709348 atgggacctacattgatttcacacaataaaagagtgagtgttagagagagtgt 44709296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 7599513 - 7599583
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    ||||| ||| || ||||| ||||||||||||||||||| ||||||||  ||| ||||||||||||| ||||    
T  7599513 ccacataaagtgctgggatatacattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaa 7599583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 17741597 - 17741655
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaa 316  Q
    ||||||||| |||||| |||| | ||||||||| |||||||||||||||||||||||||    
T  17741597 tctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttcatccaa 17741655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 43506645 - 43506539
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||| | |||| ||||||| ||||||| || ||| |||||||||||||  |||||| |||| ||||||||||  |||||||||| |||||| |||||    
T  43506645 tctacacattgaaagtagaacccacacaaagtggtggaacatacattgattatatccaataaaa-agtgagtgtt--agagagtgttcaaaagtgagtgt 43506549  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  43506548 tgctagcatt 43506539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 367
Target Start/End: Original strand, 31691625 - 31691690
Alignment:
Q  302 attgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||| | ||| |||||||||||||||| ||||||| || |||||| |||||||| ||||||    
T  31691625 attgatttcgttcaataaaagagtgagtgttaaagagagttttcaaaagtgagtgttgctagcatt 31691690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 186095 - 186127
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    |||||||||||||||||||||||||||||||||    
T  186095 tgcataaggatttccttatacaccataaccgca 186127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 13214605 - 13214542
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaa 321  Q
    ||||||||| |||||| ||| | |||||||||||||||||||||||| ||| ||||||| ||||    
T  13214605 tctacactttgaaaattgaatctacacaaaatgatgggacatacattaattccatccaataaaa 13214542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 15809854 - 15809889
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15809854 tgcataaggatttccttatgcaccataaccgcagcc 15809889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 35448624 - 35448659
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  35448624 tgcataaggatttccttatgcaccataaccgcagcc 35448659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 359
Target Start/End: Complemental strand, 17716961 - 17716862
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| ||||||  |||| ||| |||||  ||||||||| ||||||||||||||| ||||  |||||||||  | |||||| |||||||| |||||    
T  17716961 tctacactttgaaaattaaacccacataaaatagtgggacatatattgatttcatccaataaaactgtgagtgtt--aaagagtgatgaaaagtgagtgt 17716864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 45218621 - 45218667
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagag 338  Q
    |||||||  |||||||||||||||| ||||||| |||||||||||||    
T  45218621 tgggacacgcattgatttcatccaataaaagagcgagtgttagagag 45218667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 45246545 - 45246459
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||||||||| | ||||||||| | || ||| || || ||||||||||||||| |||||| |||| |||||||| || |||||||||    
T  45246545 atctacactttggaaatagaactcgcataaagtggtgagacatacattgattttatccaataaaatagtgagtgctaaagagagtgt 45246459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 16314383 - 16314436
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    ||||||||| |||| |||||| |||||||||||||| ||||||| |||| ||||    
T  16314383 acatacattaattttatccaataaaagagtgagtgtaagagagaatgtttaaaa 16314436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 16441873 - 16441828
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgtt 344  Q
    ||||| |||||||  ||| |||||||||||||||||||||||||||    
T  16441873 tacatagatttcactcaataaaagagtgagtgttagagagagtgtt 16441828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 24184446 - 24184385
Alignment:
Q  289 tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||| |||| ||||| ||||| ||||||||| || ||| | ||||||||||||||    
T  24184446 tgatgggacatgcattaatttcttccaataaaagagtgcgtattaaaaagagtgttgaaaag 24184385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 241
Target Start/End: Original strand, 41451249 - 41451278
Alignment:
Q  212 tgcataaggatttccttatacaccataacc 241  Q
    ||||||||||||||||||||||||||||||    
T  41451249 tgcataaggatttccttatacaccataacc 41451278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 17656648 - 17656616
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  17656648 tgcataaggatttccttatgcaccataaccgca 17656616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 17792906 - 17792938
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  17792906 tgcataaggatttccttatgcaccataaccgca 17792938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 23567516 - 23567484
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  23567516 tgcataaggatttccttatgcaccataaccgca 23567484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 359
Target Start/End: Original strand, 26980354 - 26980433
Alignment:
Q  280 cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||||||    
T  26980354 cacacaaaatggtgggacatacattgatttcatccaataatagagtgagtattagagagagtgttgaaaagtgagtgttg 26980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 367
Target Start/End: Original strand, 6133715 - 6133803
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||| ||| ||||||||| ||||||||||||||| ||||| ||||||| |||||||| ||||||||||| |||||||| ||||||    
T  6133715 ccacacaatatggtgggacatatattgatttcatccaataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcatt 6133803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 371
Target Start/End: Original strand, 41095680 - 41095792
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| |||||| ||||| ||||| | ||||||||||||||||||||||| |||| ||| ||||||||| ||||||||||| | |||||  ||||||    
T  41095680 ctacactttgaaaatggaacccacacagagtgatgggacatacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgtt 41095779  T
Q  359 gccagcatttctc 371  Q
    || ||||||||||    
T  41095780 gctagcatttctc 41095792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 25543427 - 25543341
Alignment:
Q  281 acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||| || ||||||||| |||||||||||| || |||||||| |||||||||||||||||| |||||| |||||||| ||||||    
T  25543427 acacaaagtggtgggacatatattgatttcatcaaataaaagagtaagtgttagagagagtgtttaaaagtgagtgttgctagcatt 25543341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 931463 - 931375
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||| ||||||||||||||||||||| || ||| ||| |||||||||||| ||||||| || |||||||||| |||||||| ||||||    
T  931463 ccacaaaaaatgatgggacatacattgcttccattcaataaaagagtgagtattagagatagagttgaaaagtgagtgttgctagcatt 931375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 41958193 - 41958081
Alignment:
Q  259 tctacacttagaaaatagaaccac-acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | |||||||| ||||||||||||||||||||||||| ||| ||||||||| |   |||||||||||||||| |||||    
T  41958193 tctacactttgaaaattgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--tgagagtgttgaaaagtgagtgt 41958096  T
Q  358 tgccagcatttctca 372  Q
    | | |||||| ||||    
T  41958095 tactagcattcctca 41958081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 367
Target Start/End: Original strand, 19101670 - 19101780
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| ||||||||||| | || ||| || ||||||||||||||||||||||||| |||| |||||||| || |||||||||  |||||| | ||    
T  19101670 atctacactttgaaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatg 19101769  T
Q  357 ttgccagcatt 367  Q
    |||| ||||||    
T  19101770 ttgctagcatt 19101780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 28218118 - 28218220
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||| ||||||||| || || |||||||||||||||||||||| |||||||||| || || |||||| |||||||| | |||||    
T  28218118 tctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaaagagtgaatgctaaagagagggttgaaaaatgagtgt 28218217  T
Q  358 tgc 360  Q
    |||    
T  28218218 tgc 28218220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 32848654 - 32848767
Alignment:
Q  260 ctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| |||||| ||| ||||| ||| || ||||||||||| |||||||| |||| ||||||||||||| ||||||||||||| |||||  ||||||    
T  32848654 ctacactttgaaaatggaatccacataaagtggtgggacatacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgtt 32848753  T
Q  359 gccagcatttctca 372  Q
    |  |||||| ||||    
T  32848754 gttagcattcctca 32848767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 18157114 - 18157034
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||  |||||  | |||||||||||    
T  18157114 tgggacatacattaatttcatccaataaaaaagtgggtgttagagagagtgttgaaaagagagtgtccctagcatttctca 18157034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 367
Target Start/End: Complemental strand, 41918104 - 41917996
Alignment:
Q  260 ctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| |||||| ||| ||||| ||| || |||||||||||||||||||| |||| ||||||||||||| ||||||| ||| | |||||  ||||||    
T  41918104 ctacactttgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagggtgctcaaaagagagtgtt 41918005  T
Q  359 gccagcatt 367  Q
    || ||||||    
T  41918004 gctagcatt 41917996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 10659838 - 10659941
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaaga-gtgagtgttagagagagtgttgaaaagttagtg 356  Q
    ||||||||| |||||| ||||| ||||||| || | |||||| |||||||||||||| | |||| | |||||||||||||||||| ||||||||| ||||    
T  10659838 tctacactttgaaaattgaacctacacaaagtggtcggacatccattgatttcatcccataaaaaaagtgagtgttagagagagtattgaaaagtgagtg 10659937  T
Q  357 ttgc 360  Q
    ||||    
T  10659938 ttgc 10659941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 29673585 - 29673498
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    ||||||||| |||||| ||| | |||||||||| ||||||||| |||||||| |||||| |||| | |||||||||||||||||||||    
T  29673585 tctacactttgaaaattgaaactacacaaaatggtgggacatatattgattttatccaataaaataatgagtgttagagagagtgttg 29673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 22540479 - 22540369
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtg 356  Q
    |||||||||| | ||||||||| | || ||| || ||||||||||||||||||||||||| |||| |||||||| || |||||||||  |||||| | ||    
T  22540479 atctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatg 22540380  T
Q  357 ttgccagcatt 367  Q
    |||| ||||||    
T  22540379 ttgctagcatt 22540369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 2225313 - 2225227
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||| ||| |  ||||||||||||||| | |||||| | ||||||    
T  2225313 ccacacaaagtggtgggacatacattgatttcatccaataaaagagtgggtgct--agagagtgttgaaaattgagtgttactagcatt 2225227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 372
Target Start/End: Complemental strand, 11135828 - 11135735
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||| ||| || |||||||||||||||||||| |||| |||| |||||||| ||||||||||| | |||||  |||||||| |||||| ||||    
T  11135828 ccacataaagtggtgggacatacattgatttcacccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctca 11135735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 28274865 - 28274804
Alignment:
Q  289 tgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    |||||||||||||| |  |||||||||| || ||||||||||||||||||||||||||||||    
T  28274865 tgatgggacatacactagtttcatccaataagagagtgagtgttagagagagtgttgaaaag 28274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 13388403 - 13388335
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||| |||| ||||||||||||||||||| || |||||  |||||||| ||||||    
T  13388403 tacattgatttcatccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcatt 13388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 39039470 - 39039534
Alignment:
Q  303 ttgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||| ||||||||||||| || | ||||||||||||||| |||||||| ||||||    
T  39039470 ttgatttcatccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcatt 39039534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 371
Target Start/End: Original strand, 13114774 - 13114853
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    ||||||||| |||||||| ||| || ||||||||||||||||||||||||||  |||||  ||||| || ||||||||||    
T  13114774 tgggacatatattgattttatctaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatttctc 13114853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 4578681 - 4578752
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagca 365  Q
    |||||| ||||||||||||| |||| |||||||||||||||  ||||||||||||||||  |||||||| ||||    
T  4578681 tgggacctacattgatttcacccaataaaagagtgagtgtt--agagagtgttgaaaagagagtgttgctagca 4578752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 36567007 - 36566925
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagaga 339  Q
    |||||||||| |||||||||||| | | ||| ||||| |||||||||||||||||||||| |||| ||| ||||||| |||||    
T  36567007 atctacactttgaaaatagaacccaaataaagtgatgagacatacattgatttcatccaataaaatagtaagtgttaaagaga 36566925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 3872704 - 3872812
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| | |||| ||||| ||||||| || || |||||| |||||||| ||  || | ||||||||||| |||||||||||||||||||| |||||    
T  3872704 tctacactttggaaattgaacctacacaaagtggtgtgacatatattgattt-atttaatagaagagtgagtgctagagagagtgttgaaaagtgagtgt 3872802  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  3872803 tgctagcatt 3872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 372
Target Start/End: Complemental strand, 11430530 - 11430437
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||| ||| || |||||||||||||||||||| |||| ||||||||||||| |||| |||||| | |||||  |||||||  |||||| ||||    
T  11430530 ccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgttgttagcattcctca 11430437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 351
Target Start/End: Complemental strand, 33193160 - 33193067
Alignment:
Q  259 tctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||||| |||||| |||||  ||||||||| ||| ||||||||||||||||||||| |||  ||||||| ||| ||||| |||| ||||||    
T  33193160 tctacactttgaaaattgaaccctcacaaaatggtggcacatacattgatttcatccaataaataagtgagtattatagagaatgttaaaaagt 33193067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 351
Target Start/End: Complemental strand, 44272028 - 44271935
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||||| |||||| ||||| ||| |||||| ||| ||||||||||||||||| ||| |||| ||| |||| || |||||||||| ||||||    
T  44272028 tctacactttgaaaattgaacctacaaaaaatggtggaacatacattgatttcattcaataaaatagtaagtgctaaagagagtgtttaaaagt 44271935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 44739227 - 44739126
Alignment:
Q  260 ctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| | ||||| ||| |||| ||| || ||||||||||||| ||||||  ||| ||||||||||||| ||||||||||||| |||||  ||||||    
T  44739227 ctacactttggaaatacaactcacataaagtggtgggacatacattaatttcactcaagaaaagagtgagtgctagagagagtgttcaaaagagagtgtt 44739128  T
Q  359 gc 360  Q
    ||    
T  44739127 gc 44739126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 52158720 - 52158671
Alignment:
Q  301 cattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  52158720 cattgatttcatccaacaagagagtgggtgttagagagagcgttgaaaag 52158671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 279 - 367
Target Start/End: Original strand, 14094092 - 14094180
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||| ||| || |||||||||||||||||||| |||| |||| |||||||| | ||||||||||| ||||| || ||| || ||||||    
T  14094092 ccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctggagagagtgttcaaaagataatgtcgctagcatt 14094180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 15523286 - 15523235
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    ||||||||||||||||||||||||| |||| |||||||| || |||||||||    
T  15523286 tgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 15523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 15531280 - 15531229
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    ||||||||||||||||||||||||| |||| |||||||| || |||||||||    
T  15531280 tgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 15531229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 32211890 - 32211941
Alignment:
Q  294 ggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||||||||||||||||||| || ||||||||||||| | ||||||||||||    
T  32211890 ggacatacattgatttcatctaataaaagagtgagtgctggagagagtgttg 32211941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 350
Target Start/End: Original strand, 14341025 - 14341083
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||| |||  |||||||||| |||| | ||||||||||||||||||||||||||    
T  14341025 tgggacatatattagtttcatccaataaaaaaatgagtgttagagagagtgttgaaaag 14341083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 344
Target Start/End: Complemental strand, 15928665 - 15928579
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgtt 344  Q
    ||||||| | ||||||||||| ||||||||||| || |||||||||  ||| |||| || ||||||||| ||| |||||||||||||    
T  15928665 tctacaccttgaaaatagaactcacacaaaatggtgagacatacatgaattccatcaaataaaagagtgggtgctagagagagtgtt 15928579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 50539234 - 50539160
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgtt 332  Q
    |||||||| ||||||| ||||| ||| ||| || ||| |||||| |||||||||||||| |||||||||||||||    
T  50539234 tctacactgagaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtgagtgtt 50539160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 359
Target Start/End: Complemental strand, 11987736 - 11987635
Alignment:
Q  259 tctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| |||||  ||| || || ||| ||||||||| ||||||||||| ||| || | | |||| |||||||||||||||||| |||||    
T  11987736 tctacactttgaaaattgaacccgcactaagtggtggaacatacattaatttcatccaataaatgaataaatgttggagagagtgttgaaaagtgagtgt 11987637  T
Q  358 tg 359  Q
    ||    
T  11987636 tg 11987635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 50773202 - 50773263
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagag 340  Q
    ||||| ||| || ||| ||||| |||||||| |||||| |||||||||||||||||||||||    
T  50773202 ccacataaagtggtggaacatatattgattttatccaataaaagagtgagtgttagagagag 50773263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 8899123 - 8899011
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgtt 358  Q
    |||||||| |||||| ||||| |||||||  | |||||||||| || |||||||| ||  ||| ||  |||||||||| || ||||||||||| ||||||    
T  8899123 ctacactttgaaaattgaacccacacaaaggggtgggacatacctttatttcatctaattaaatagcaagtgttagagggaatgttgaaaagtgagtgtt 8899024  T
Q  359 gccagcatttctc 371  Q
    || | ||||||||    
T  8899023 gctaacatttctc 8899011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 33157022 - 33156982
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcccttat 252  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  33157022 tgcataaggatttccttatgcaccataaccgcaccccttat 33156982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 37553018 - 37553110
Alignment:
Q  258 atctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    |||||||||| ||||||| |||| ||  ||| |||||||||| ||||| ||||||||||| || | ||| |||| ||||||||||||| ||||    
T  37553018 atctacactttgaaaataaaacccactaaaagtgatgggacaaacattaatttcatccaataagaaagtaagtgctagagagagtgttcaaaa 37553110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 10974663 - 10974628
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10974663 tgcataaggatttccttatgcaccataaccgcagcc 10974628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 366
Target Start/End: Original strand, 11135853 - 11135920
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcat 366  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||  | |||||  |||||||| |||||    
T  11135853 tacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcat 11135920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 18057823 - 18057854
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgc 243  Q
    ||||||||||||||||||||||||||||||||    
T  18057823 tgcataaggatttccttatacaccataaccgc 18057854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 27570313 - 27570242
Alignment:
Q  280 cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||||| || |||||||||  || |||||| |||| |||||| ||||||| |||||||||||| ||||||    
T  27570313 cacacaaattggtgggacatatcttaatttcaaccaataaaagaatgagtgtcagagagagtgttaaaaagt 27570242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 350
Target Start/End: Complemental strand, 28941927 - 28941840
Alignment:
Q  264 acttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||| ||||| ||| || ||| ||||||||||| | ||||||||||| |||| | ||||| || ||||||||||| |||||    
T  28941927 acttagaaaatggaacccacataatatggtgggacatacaataatttcatccaataaaaaaatgagtattggagagagtgttcaaaag 28941840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 31602120 - 31602077
Alignment:
Q  307 tttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    |||||||||| || ||| ||||||||||||||||||||||||||    
T  31602120 tttcatccaataagagaatgagtgttagagagagtgttgaaaag 31602077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 31763987 - 31764022
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31763987 tgcataaggatttccttatgcaccataaccgcagcc 31764022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 323
Target Start/End: Complemental strand, 31866392 - 31866361
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaaga 323  Q
    ||||||||||||||||||||||||||||||||    
T  31866392 tgggacatacattgatttcatccaacaaaaga 31866361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 41948218 - 41948309
Alignment:
Q  261 tacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||| |||||| |||||| |||||| || | | | |||||||||||| |||||| |||||||||||| ||||| | |||||| ||||||    
T  41948218 tacactttgaaaattgaaccaacacaaagtggtagaatatacattgattttatccaataaaagagtgagtattagaaatagtgttaaaaagt 41948309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 42133974 - 42133939
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  42133974 tgcataaggatttccttatgcaccataaccgcagcc 42133939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 341
Target Start/End: Original strand, 50424980 - 50425019
Alignment:
Q  302 attgatttcatccaacaaaagagtgagtgttagagagagt 341  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  50424980 attgattttatccaataaaagagtgagtgttagagagagt 50425019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 21977263 - 21977205
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    |||||||||||||  ||||||| || || | ||||||| ||||||||||||||||||||    
T  21977263 tgggacatacattagtttcatcaaataagaaagtgagttttagagagagtgttgaaaag 21977205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 344
Target Start/End: Complemental strand, 24886099 - 24886061
Alignment:
Q  306 atttcatccaacaaaagagtgagtgttagagagagtgtt 344  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  24886099 atttcacccaataaaagagtgagtgttagagagagtgtt 24886061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 27464749 - 27464791
Alignment:
Q  307 tttcatccaacaaaagagtgagtgttagagagagtgttgaaaa 349  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||    
T  27464749 tttcaaccaataaatgagtgagtgttagagagagtgttgaaaa 27464791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 30678981 - 30679051
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgag 328  Q
    ||||||||| |||||| ||||| ||||||| || |||||||||||||||||| |||||   ||||||||||    
T  30678981 tctacactttgaaaattgaacccacacaaagtggtgggacatacattgattttatccattgaaagagtgag 30679051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 21466681 - 21466750
Alignment:
Q  298 atacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||| ||||||||||||| |||| |||||||| || |||||||||  |||||| | |||||| ||||||    
T  21466681 atacactgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcatt 21466750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 347
Target Start/End: Complemental strand, 49730974 - 49730885
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaa 347  Q
    ||||||||| |||||| ||||| ||||||| |  || |||||| |||  ||| ||| || |||||||||||||||| |||||||||||||    
T  49730974 tctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtgagtgttatagagagtgttgaa 49730885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 1395365 - 1395397
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  1395365 tgcataaggatttccttatgcaccataaccgca 1395397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 9041065 - 9041097
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  9041065 tgcataaggatttccttatgcaccataaccgca 9041097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 9165376 - 9165340
Alignment:
Q  294 ggacatacattgatttcatccaacaaaagagtgagtg 330  Q
    |||||||||||||||||| |||| |||||||||||||    
T  9165376 ggacatacattgatttcacccaataaaagagtgagtg 9165340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 11430555 - 11430622
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||| |||| |||| ||||||||||||| ||||||||||| | |||||  |||||||| ||||||    
T  11430555 tacattgaattca-ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 11430622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 14229202 - 14229170
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  14229202 tgcataaggatttccttatgcaccataaccgca 14229170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 15660969 - 15660929
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgtt 332  Q
    |||||||| ||||||||| |||||| |||||||||||||||    
T  15660969 tgggacatgcattgattttatccaataaaagagtgagtgtt 15660929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 17893287 - 17893319
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  17893287 tgcataaggatttccttatgcaccataaccgca 17893319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 28109957 - 28109877
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||| |||||| ||| |||| ||||||||||| |||| |||| |||||||| |||||| |||| | ||||| || |||||    
T  28109957 ccacataaaatggtggaacatgcattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaagataatgttg 28109877  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 31763802 - 31763766
Alignment:
Q  215 ataaggatttccttatacaccataaccgcagccctta 251  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  31763802 ataaggatttccttatgcaccataaccgcacccctta 31763766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 32143783 - 32143815
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  32143783 tgcataaggatttccttatgcaccataaccgca 32143815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 41095675 - 41095607
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||| |||| |||  |||||||| ||||||||||| | |||||  |||||||| ||||||    
T  41095675 tacattgatttcacccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 41095607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 49992548 - 49992516
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  49992548 tgcataaggatttccttatgcaccataaccgca 49992516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 50773177 - 50773105
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctc 371  Q
    |||||| |||| | |||| |||||| |||||| ||||||||||||| |||||  ||| |||| ||||||||||    
T  50773177 tacattaattttacccaataaaagaatgagtgctagagagagtgttcaaaagagagtattgctagcatttctc 50773105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 9774 - 9687
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||||||||  ||||| ||||| |||||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  9774 tctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagagagtgttg 9687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 11320 - 11233
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||||||||  ||||| ||||| |||||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  11320 tctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagagagtgttg 11233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 10142046 - 10142153
Alignment:
Q  259 tctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| |||||| |||||| || |||||||||||||||||| |||||| ||||||||||||| |  | ||||||||||||| | |||||    
T  10142046 tctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattttatccaataaaagagtgagtgct--atagagtgttgaaaaatgagtgt 10142143  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  10142144 tgctagcatt 10142153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 17537171 - 17537265
Alignment:
Q  258 atctacacttagaaaatagaacca-cacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||||||| ||||||  ||||| || ||| || |||||||||||||||||| ||| || ||||||||||||| ||||||||||||||||||||    
T  17537171 atctacactttgaaaattaaaccaacaaaaattggtgggacatacattgatttgatcaaataaaagagtgagtgatagagagagtgttgaaaagt 17537265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 4959367 - 4959279
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||| ||||||||| ||||||||||||||||| |||| ||||||||| || |||||||||||| | |||||  |||||||| ||||||    
T  4959367 ccacataaaatgatgagacatacattgatttcacccaataaaagagtgggtattagagagagtgctcaaaagagagtgttgctagcatt 4959279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 367
Target Start/End: Original strand, 28490815 - 28490901
Alignment:
Q  281 acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||| || |||||||||| |||||||||||||| |||| ||||| || |||||||||| ||||||||| | |||||| ||||||    
T  28490815 acacaaagtggtgggacatactttgatttcatccaataaaaaagtgaatgctagagagagttttgaaaagtgactgttgctagcatt 28490901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 25545572 - 25545621
Alignment:
Q  198 gggtgcggttatgttgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  25545572 gggtgcggttatggtgcataaggatttccttatgcaccataaccgcagcc 25545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 34368470 - 34368361
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||  ||||| ||||||| || ||| |||||||||| ||| ||||||  ||||||||||||||||||| |||||| |||| | |||||    
T  34368470 tctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtgagtgttagagaaagtgttcaaaaataagtgt 34368371  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  34368370 tgctagcatt 34368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 372
Target Start/End: Original strand, 42224682 - 42224775
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||| ||| || |||||||||||||||||||| | || ||||||||||||| ||||||||||| | |||||  |||||||| |||||| ||||    
T  42224682 ccacataaagtggtgggacatacattgatttcacctaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctca 42224775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 5413807 - 5413878
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagt 329  Q
    ||||||||| | |||| ||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  5413807 tctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaaagagtgagt 5413878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 351
Target Start/End: Complemental strand, 4714864 - 4714766
Alignment:
Q  254 gtgtatctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    ||||||||||| || |||||||||||| |||||||||||||||||| ||| | |||| |||||| |||| ||||| ||||| | |||| ||| ||||||    
T  4714864 gtgtatctacattttgaaaatagaacccacacaaaatgatgggacacacaataatttaatccaataaaaaagtgaatgttaaaaagagggttcaaaagt 4714766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 266 - 371
Target Start/End: Original strand, 31542320 - 31542426
Alignment:
Q  266 ttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagc 364  Q
    ||||||||| ||| ||||| ||| ||||||||| |||||| |||||| |||| |||  | |||||||||||||||||| | ||||| |||| |||| |||    
T  31542320 ttagaaaatggaatccacataaagtgatgggacgtacattaatttcacccaataaataaatgagtgttagagagagtgctcaaaagatagttttgctagc 31542419  T
Q  365 atttctc 371  Q
    |||||||    
T  31542420 atttctc 31542426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 1649621 - 1649568
Alignment:
Q  297 catacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    |||||||| ||||||||||| || | ||||||||||||||||||||||||||||    
T  1649621 catacattaatttcatccaataagatagtgagtgttagagagagtgttgaaaag 1649568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 338
Target Start/End: Original strand, 10253164 - 10253232
Alignment:
Q  271 aaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagag 338  Q
    ||||||||| |||| ||| || ||||||||||||| ||||||||||| | |||||||||||||||||||    
T  10253164 aaatagaactcacataaagtggtgggacatacattaatttcatccaatagaagagtgagtgttagagag 10253232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 30325981 - 30326053
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||||||||| |||| |||||||| || |||||||||  |||||| | |||||| ||||||    
T  30325981 gacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcatt 30326053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 34384783 - 34384863
Alignment:
Q  280 cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgc 360  Q
    ||||||||||  |||||||||||||||||||| |||| |||||| ||||||||| ||| ||| || |||||| || |||||    
T  34384783 cacacaaaatagtgggacatacattgatttcacccaataaaagaatgagtgttaaagaaagtattaaaaagtgagcgttgc 34384863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 37455459 - 37455359
Alignment:
Q  259 tctacacttagaaaatagaaccac-acaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | |||||||| ||| |||||||||||||| ||| || ||| ||||| ||| ||||||||||||| |||| | |||||    
T  37455459 tctacactttgaaaattgaacccccacaaaatggtggaacatacattgattttatcgaataaatgagtgtgtgctagagagagtgttaaaaaatgagtgt 37455360  T
Q  358 t 358  Q
    |    
T  37455359 t 37455359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 40971557 - 40971637
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||||||||||||||||||  ||| ||||||||||||| ||||||||||| | |||||  |||||||  |||||| ||||    
T  40971557 tgggacatacattgatttcactcaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgttagcattcctca 40971637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 41330463 - 41330531
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtg 326  Q
    ||||||||| |||||| ||||| ||||||| |||||||||||||||| |||||||| || |||||||||    
T  41330463 tctacactttgaaaattgaacctacacaaagtgatgggacatacattaatttcatctaataaaagagtg 41330531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 10950196 - 10950109
Alignment:
Q  259 tctacacttagaaaatagaa-ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||| |||| |||||||||| ||| |||||||| ||||||||||||||||||||| |||  ||||||| ||||  | |||||||||||    
T  10950196 tctatactttgaaaatagaatccatacaaaatggtgggacatacattgatttcattcaatgaaagagtaagtgagaaagagagtgttg 10950109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 13456236 - 13456315
Alignment:
Q  260 ctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagag 338  Q
    |||||||| |||||| ||||| ||| |||||| ||||| ||||||||||||||||| | ||||||||||||  |||||||    
T  13456236 ctacactttgaaaatggaacccacataaaatggtgggaaatacattgatttcatccgataaaagagtgagtaatagagag 13456315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 25710542 - 25710629
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    ||||||||| ||||||||||| || || || || | ||||||||||||||||||  ||| ||||||||||||| || |||||||||||    
T  25710542 tctacactttgaaaatagaactcatacgaagtggtaggacatacattgatttcacacaataaaagagtgagtgataaagagagtgttg 25710629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 25630917 - 25630803
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||| ||||| | |||||||  ||||| ||||||| |||| ||  || |||| ||| | ||||| ||||||||||||||||| ||| |    
T  25630917 tctacactttgaaaattgaacctatacaaaatagtgggatatacattaattttattaaataaaatagtaaatgttaaagagagtgttgaaaagtaagtat 25630818  T
Q  358 tgccagcatttctca 372  Q
    ||| |||||||||||    
T  25630817 tgctagcatttctca 25630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 27592521 - 27592607
Alignment:
Q  258 atctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||||||||| | ||||||||| | || ||| || || |||||||||||||||||||||| |||| |||||||| || |||||||||    
T  27592521 atctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 27592607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 28434888 - 28434973
Alignment:
Q  259 tctacacttagaaaatagaaccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||| |||| |||||| |||||| ||| | || ||||||||| |||||||| |||||| |||||| | |||||||||||||||||||    
T  28434888 tctaaactttgaaaattgaacca-acacagtggtgggacatatattgattttatccaataaaagaattagtgttagagagagtgttg 28434973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 249
Target Start/End: Complemental strand, 11660823 - 11660786
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagccct 249  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  11660823 tgcataaggatttccttatgcaccataaccgcagccct 11660786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 28611848 - 28611949
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    |||||||||  ||||| |||| || ||||| |||||||||||||| || ||  ||||||  ||||||||| |||||||||||||| | |||||| |||||    
T  28611848 tctacactttaaaaatggaactcatacaaagtgatgggacatacactggttatatccaatgaaagagtgaatgttagagagagtgctcaaaagtgagtgt 28611947  T
Q  358 tg 359  Q
    ||    
T  28611948 tg 28611949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 39246718 - 39246609
Alignment:
Q  259 tctacacttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgt 357  Q
    ||||||||| |||||  |||| |||||||| || |||||||||||||||||| |||||| || | ||||| ||||||||||  || | |||||| | |||    
T  39246718 tctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataagaaagtgattgttagagaggatgctcaaaagtgattgt 39246619  T
Q  358 tgccagcatt 367  Q
    ||| ||||||    
T  39246618 tgctagcatt 39246609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 43541956 - 43541871
Alignment:
Q  264 acttagaaaatagaac-cacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaa 348  Q
    |||| |||||| |||| |||||||| ||||| ||||||||||||||| || ||| |||||||  ||| ||| ||||||||||||||    
T  43541956 actttgaaaattgaactcacacaaagtgatgagacatacattgattttattcaataaaagaggaagtattaaagagagtgttgaaa 43541871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 28223884 - 28223960
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    ||||||| | ||||||| ||| |||||| | ||||||| ||  ||||||||||||| |||||||| |||||||||||    
T  28223884 acatacaataatttcattcaataaaagaataagtgttaaaggtagtgttgaaaagtgagtgttgctagcatttctca 28223960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 32309554 - 32309498
Alignment:
Q  294 ggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||| |||| |||||| || |||||||||| |||||||| ||||||||||    
T  32309554 ggacatacattaattttatccaataagagagtgagtgctagagagaatgttgaaaag 32309498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 22695554 - 22695589
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22695554 tgcataaggatttccttatgcaccataaccgcagcc 22695589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 28069277 - 28069246
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgc 243  Q
    ||||||||||||||||||||||||||||||||    
T  28069277 tgcataaggatttccttatacaccataaccgc 28069246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 32050418 - 32050489
Alignment:
Q  296 acatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||||||||||||| |||| |||| |||||||| |||||||| || | |||||  |||||||| ||||||    
T  32050418 acatacattgatttcacccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcatt 32050489  T

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Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 36864282 - 36864313
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgc 243  Q
    ||||||||||||||||||||||||||||||||    
T  36864282 tgcataaggatttccttatacaccataaccgc 36864313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 41105644 - 41105727
Alignment:
Q  263 cacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    ||||| |||||| ||||| ||||||| |  |||||||| | |||||||||||||| |||||||| ||| ||| |||||||||||    
T  41105644 cactttgaaaattgaacccacacaaagtagtgggacatcccttgatttcatccaataaaagagtaagttttatagagagtgttg 41105727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 20134229 - 20134195
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagc 246  Q
    ||||||||||||||||||| |||||||||||||||    
T  20134229 tgcataaggatttccttatgcaccataaccgcagc 20134195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 40971519 - 40971453
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagca 365  Q
    ||||||||||| | |||| |||| ||||||||||||| |||||||| |||||  |||||||| ||||    
T  40971519 tacattgattttacccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagca 40971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 359
Target Start/End: Complemental strand, 2525644 - 2525583
Alignment:
Q  298 atacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||||||||||||||| |||| |  |||||||| |||||||||| |||| | |||||||    
T  2525644 atacattgatttcatccaataaaaaaacgagtgttaaagagagtgttaaaaaatgagtgttg 2525583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 25564037 - 25564090
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgtt 332  Q
    ||||||||| || ||| ||||||||| ||||||||||| ||||| |||||||||    
T  25564037 ccacacaaagtggtggaacatacatttatttcatccaataaaagggtgagtgtt 25564090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 3340620 - 3340588
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  3340620 tgcataaggatttccttatgcaccataaccgca 3340588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 4959391 - 4959435
Alignment:
Q  298 atacattgatttcatccaacaaaagagtgagtgttagagagagtg 342  Q
    |||||||||||||  |||| ||||||||||||| |||||||||||    
T  4959391 atacattgatttcccccaataaaagagtgagtgctagagagagtg 4959435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 7286783 - 7286751
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||| |||||||||||||||||||||||||    
T  7286783 tgcataaagatttccttatacaccataaccgca 7286751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 7584899 - 7584863
Alignment:
Q  307 tttcatccaacaaaagagtgagtgttagagagagtgt 343  Q
    |||||||||| |||||| |||||||||||||||||||    
T  7584899 tttcatccaataaaagaatgagtgttagagagagtgt 7584863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 15559079 - 15559047
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  15559079 tgcataaggatttccttatgcaccataaccgca 15559047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 17568768 - 17568700
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    |||||| ||||||||||| ||||||||| ||| ||| ||||||| | |||||  |||||||| ||||||    
T  17568768 tacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcatt 17568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 20134413 - 20134445
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  20134413 tgcataaggatttccttatgcaccataaccgca 20134445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 26072176 - 26072112
Alignment:
Q  295 gacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttg 359  Q
    ||||||||||||||||| |||| |||||| ||||| ||||| |||||| | |||||  |||||||    
T  26072176 gacatacattgatttcacccaaaaaaagaatgagtattagaaagagtgctcaaaagagagtgttg 26072112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 26072218 - 26072290
Alignment:
Q  300 acattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatttctca 372  Q
    |||||| ||||| |||| ||||||||||||| |||||||| || | |||||  |||||||| |||||| ||||    
T  26072218 acattgttttcacccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcattcctca 26072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 32050414 - 32050330
Alignment:
Q  262 acacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttg 345  Q
    |||||| |||||| ||||| ||| ||| ||||| |||||| ||| |||||| |||| |||||| ||| || ||||||||||||||    
T  32050414 acactttgaaaatggaacccacataaagtgatgagacatatattaatttcacccaataaaagaatgaatgctagagagagtgttg 32050330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 39861794 - 39861826
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  39861794 tgcataaggatttccttatgcaccataaccgca 39861826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 42224657 - 42224589
Alignment:
Q  299 tacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagttagtgttgccagcatt 367  Q
    ||||||||||||| |||| ||||||||||||| | ||||||||  | |||||  |||||||| ||||||    
T  42224657 tacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcatt 42224589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 330
Target Start/End: Complemental strand, 43405503 - 43405431
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtg 330  Q
    ||||||||| | |||||||||  | ||||| || || |||||||||||||||||| ||| |||||||||||||    
T  43405503 tctacactttggaaatagaacatatacaaagtggtgagacatacattgatttcattcaataaaagagtgagtg 43405431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1450 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1450
Description:

Target: scaffold1450; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 795 - 748
Alignment:
Q  197 ggggtgcggttatgttgcataaggatttccttatacaccataaccgca 244  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  795 ggggtgcggttatgatgcataaggatttccttatgcaccataaccgca 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 296912 - 296854
Alignment:
Q  292 tgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaag 350  Q
    ||||||||||| |  |||||||||| || ||||||||||||||||||||||||||||||    
T  296912 tgggacatacactagtttcatccaataagagagtgagtgttagagagagtgttgaaaag 296854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 35683 - 35630
Alignment:
Q  279 ccacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgtt 332  Q
    ||||| ||||||||||||||||||||||||||||| || || ||||||||||||    
T  35683 ccacataaaatgatgggacatacattgatttcatcaaataagagagtgagtgtt 35630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 330
Target Start/End: Complemental strand, 27922 - 27850
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtg 330  Q
    ||||||||| | |||||||||| ||||||| || ||||||||||||||||| ||||||| ||||| |||||||    
T  27922 tctacactttggaaatagaacccacacaaagtggtgggacatacattgattccatccaataaaagcgtgagtg 27850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 2312 - 2239
Alignment:
Q  278 accacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||||||| |  || |||||||||||||||||||  | ||||||||||||| |||||||| | |||||||||    
T  2312 accacacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagagagaatattgaaaagt 2239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 351
Target Start/End: Complemental strand, 2343 - 2270
Alignment:
Q  278 accacacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtgttgaaaagt 351  Q
    |||||||||| |  || |||||||||||||||||||  | ||||||||||||| |||||||| | |||||||||    
T  2343 accacacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagagagaatattgaaaagt 2270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 26932 - 27016
Alignment:
Q  259 tctacacttagaaaatagaacc-acacaaaatgatgggacatacattgatttcatccaacaaaagagtgagtgttagagagagtg 342  Q
    ||||| ||| |||||| ||||| ||||||| || ||| ||||||||||||||  ||||| || ||||||||||||| ||||||||    
T  26932 tctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtgagtgttaaagagagtg 27016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 1262 - 1297
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1262 tgcataaggatttccttatgcaccataaccgcagcc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 23574 - 23539
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagcc 247  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23574 tgcataaggatttccttatgcaccataaccgcagcc 23539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Complemental strand, 33646 - 33609
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgcagccct 249  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  33646 tgcataaggatttccttatgcaccataaccgcacccct 33609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 20134 - 20166
Alignment:
Q  212 tgcataaggatttccttatacaccataaccgca 244  Q
    ||||||||||||||||||| |||||||||||||    
T  20134 tgcataaggatttccttatgcaccataaccgca 20166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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