View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5841_high_9 (Length: 302)
Name: NF5841_high_9
Description: NF5841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5841_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 15 - 289
Target Start/End: Original strand, 45206720 - 45206994
Alignment:
| Q |
15 |
aacatggccactatctttggttcctcatcaattttcttactcccccataccagaaccagtcatcacatcacttcttcatcagcaactcctccaccacaac |
114 |
Q |
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| T |
45206720 |
aacatggccactatctttggttcctcatcaattttcttactccccaataccagaaccagtcatcacatcacttcttcatcagcaactcctccaccacaac |
45206819 |
T |
|
| Q |
115 |
aaccgcaaccctcaggtccatcatctccacagtcaacaacaaatttgaatgaagatcagtcagtgcaagtctctgccaaagcacagcaacagattcctat |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45206820 |
aaccgcaaccctcaggtccatcatctccacagtcaacaacaaatttgaatgaagatcagtcagtgcaagtctctgccaaagcacagcaacagattcctat |
45206919 |
T |
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| Q |
215 |
taaaccagttgtttcatcaactaaggttgattccacagactggattgccacttccttgaccagacggtttggcct |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45206920 |
taaaccagttgtttcatcaactaaggttgattccacagactggattgccacttccttgaccagacggtttggcct |
45206994 |
T |
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