View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5841_low_13 (Length: 231)

Name: NF5841_low_13
Description: NF5841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5841_low_13
NF5841_low_13
[»] chr7 (11 HSPs)
chr7 (25-173)||(39342012-39342160)
chr7 (78-127)||(7717905-7717954)
chr7 (78-127)||(7718836-7718885)
chr7 (78-127)||(12893969-12894018)
chr7 (78-127)||(34009566-34009615)
chr7 (78-127)||(44343037-44343086)
chr7 (78-127)||(47879713-47879762)
chr7 (78-127)||(47914791-47914840)
chr7 (78-122)||(448236-448280)
chr7 (78-122)||(31401950-31401994)
chr7 (78-122)||(39218918-39218962)
[»] chr3 (4 HSPs)
chr3 (81-127)||(6034729-6034775)
chr3 (78-127)||(3999184-3999233)
chr3 (78-127)||(16008134-16008183)
chr3 (78-127)||(54626098-54626147)
[»] chr8 (6 HSPs)
chr8 (78-127)||(10391730-10391779)
chr8 (78-127)||(32711164-32711213)
chr8 (78-127)||(33850955-33851004)
chr8 (78-127)||(42936829-42936878)
chr8 (78-127)||(42938007-42938056)
chr8 (78-122)||(5576170-5576214)
[»] chr5 (2 HSPs)
chr5 (78-127)||(33655617-33655666)
chr5 (78-127)||(43319264-43319313)
[»] chr4 (6 HSPs)
chr4 (78-127)||(24130497-24130546)
chr4 (78-127)||(25331676-25331725)
chr4 (78-127)||(25446664-25446713)
chr4 (78-127)||(34228196-34228245)
chr4 (78-127)||(40536601-40536650)
chr4 (83-127)||(5104951-5104995)
[»] chr2 (3 HSPs)
chr2 (78-127)||(12407958-12408007)
chr2 (78-127)||(12420018-12420067)
chr2 (78-127)||(22551410-22551459)
[»] chr1 (6 HSPs)
chr1 (78-127)||(956081-956130)
chr1 (78-127)||(6303811-6303860)
chr1 (78-127)||(19451317-19451366)
chr1 (78-122)||(35280284-35280328)
chr1 (78-126)||(37014356-37014404)
chr1 (78-126)||(47784793-47784841)


Alignment Details
Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 173
Target Start/End: Original strand, 39342012 - 39342160
Alignment:
Q  25 aaacaagggctttgttagcatgtctgcccattgatctggagctgatatatgagtgtttaaaaaagtctcgtggattttaatagactttgcacgattttaa 124  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  39342012 aaacaagggctttgttagcatgtctgcctattgatctggagctgatatatgagtgtttaagaaagtctcgtggattttaatatactttgcacgattttaa 39342111  T
Q  125 tgaaggatttgaaatcactttatagattcataagatttcaaaagactta 173  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39342112 tgaaggatttgaaatcaatttatagattcataagatttcaaaagactta 39342160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 7717905 - 7717954
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  7717905 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 7717954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 7718836 - 7718885
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  7718836 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 7718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 12894018 - 12893969
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  12894018 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 12893969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 34009615 - 34009566
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  34009615 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 34009566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 44343037 - 44343086
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  44343037 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttcatga 44343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 47879762 - 47879713
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  47879762 tgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatga 47879713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 47914840 - 47914791
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  47914840 tgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatga 47914791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 448280 - 448236
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgatttt 122  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||||    
T  448280 tgtttaaaaaagtcttgaggattttaaaagactttgcaggatttt 448236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 31401994 - 31401950
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgatttt 122  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||||    
T  31401994 tgtttaaaaaagtcttgaggattttaaaagactttgcaggatttt 31401950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 39218918 - 39218962
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgatttt 122  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||||    
T  39218918 tgtttaaaaaagtcttgaggattttaaaagactttgcaagatttt 39218962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 127
Target Start/End: Original strand, 6034729 - 6034775
Alignment:
Q  81 ttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||    
T  6034729 ttaaaaaagtctcgtggattttaaaagactttgtatgattttaatga 6034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 3999184 - 3999233
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  3999184 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 3999233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 16008134 - 16008183
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  16008134 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 16008183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 54626147 - 54626098
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  54626147 tgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatga 54626098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 10391730 - 10391779
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  10391730 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 10391779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 32711164 - 32711213
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  32711164 tgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatga 32711213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 33851004 - 33850955
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  33851004 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 33850955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 42936829 - 42936878
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  42936829 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 42936878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 42938056 - 42938007
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  42938056 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 42938007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 5576170 - 5576214
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgatttt 122  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||||    
T  5576170 tgtttaaaaaagtcttggggattttaaaagactttgcaagatttt 5576214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 33655617 - 33655666
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  33655617 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 33655666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 43319264 - 43319313
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  43319264 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 43319313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 30; Significance: 0.00000008; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 24130497 - 24130546
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  24130497 tgtttaaaaaagtcttgaggattttaaaagactttgcatgattttgatga 24130546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 25331725 - 25331676
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  25331725 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 25331676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 25446713 - 25446664
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  25446713 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 25446664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 34228196 - 34228245
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  34228196 tgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatga 34228245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 40536601 - 40536650
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  40536601 tgtttaaaaaagtcttggggattttaaaagactttgcaggattttgatga 40536650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 5104995 - 5104951
Alignment:
Q  83 aaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    |||||||||| ||||||||||| |||||||| | |||||||||||    
T  5104995 aaaaaagtcttgtggattttaaaagactttgaaagattttaatga 5104951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 12408007 - 12407958
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  12408007 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 12407958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 12420067 - 12420018
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  12420067 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 12420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 22551410 - 22551459
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  22551410 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 22551459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.00000008; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 956130 - 956081
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  956130 tgtttaaaaaagtcttgaggattttaaaagactttgcaggattttgatga 956081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 6303811 - 6303860
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  6303811 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 6303860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 19451317 - 19451366
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatga 127  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||| ||||    
T  19451317 tgtttaaaaaagtcttgaggattttaaaagactttgcaagattttgatga 19451366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 35280328 - 35280284
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgatttt 122  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||||    
T  35280328 tgtttaaaaaagtcttgaggattttaaaagactttgcaagatttt 35280284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 37014356 - 37014404
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatg 126  Q
    |||||||||||||||   ||||||||| |||||||||| ||||||||||    
T  37014356 tgtttaaaaaagtcttaaggattttaaaagactttgcatgattttaatg 37014404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 47784841 - 47784793
Alignment:
Q  78 tgtttaaaaaagtctcgtggattttaatagactttgcacgattttaatg 126  Q
    |||||||||||||||  |||||||||| |||||||||| | ||||||||    
T  47784841 tgtttaaaaaagtcttatggattttaaaagactttgcatgcttttaatg 47784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University