View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5844-Insertion-2 (Length: 871)

Name: NF5844-Insertion-2
Description: NF5844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5844-Insertion-2
NF5844-Insertion-2
[»] chr7 (14 HSPs)
chr7 (193-549)||(36682364-36682727)
chr7 (728-871)||(36682053-36682188)
chr7 (86-156)||(36682764-36682834)
chr7 (8-88)||(36683553-36683633)
chr7 (749-865)||(43051795-43051912)
chr7 (761-869)||(33249523-33249632)
chr7 (746-865)||(46290482-46290602)
chr7 (769-850)||(30685258-30685340)
chr7 (761-869)||(14238700-14238809)
chr7 (745-868)||(42271039-42271162)
chr7 (780-865)||(22643918-22644004)
chr7 (787-870)||(33614135-33614219)
chr7 (785-871)||(41987977-41988064)
chr7 (833-871)||(35396058-35396096)
[»] chr3 (7 HSPs)
chr3 (737-865)||(52253751-52253880)
chr3 (769-871)||(1471601-1471704)
chr3 (737-871)||(46443842-46443977)
chr3 (737-865)||(43659100-43659229)
chr3 (796-865)||(24346174-24346244)
chr3 (833-871)||(24929150-24929188)
chr3 (796-865)||(43884958-43885028)
[»] chr6 (2 HSPs)
chr6 (728-869)||(11577523-11577665)
chr6 (833-871)||(9349243-9349281)
[»] chr2 (7 HSPs)
chr2 (745-865)||(9225058-9225179)
chr2 (746-869)||(38376393-38376517)
chr2 (749-865)||(39640515-39640632)
chr2 (746-865)||(4843328-4843448)
chr2 (745-865)||(9272926-9273047)
chr2 (777-865)||(2317662-2317751)
chr2 (833-871)||(6762621-6762659)
[»] chr1 (7 HSPs)
chr1 (737-865)||(45337600-45337729)
chr1 (745-865)||(30725800-30725921)
chr1 (745-865)||(34918321-34918442)
chr1 (745-865)||(52906824-52906945)
chr1 (770-871)||(11523157-11523257)
chr1 (775-869)||(41318456-41318551)
chr1 (761-869)||(5042182-5042291)
[»] chr8 (3 HSPs)
chr8 (745-862)||(33099556-33099674)
chr8 (833-870)||(22914488-22914525)
chr8 (780-852)||(25980746-25980819)
[»] chr4 (13 HSPs)
chr4 (748-865)||(38236141-38236259)
chr4 (754-865)||(44937076-44937188)
chr4 (761-869)||(33571990-33572099)
chr4 (737-865)||(41326605-41326734)
chr4 (769-854)||(33633137-33633223)
chr4 (196-301)||(41590644-41590748)
chr4 (777-868)||(10310615-10310707)
chr4 (769-866)||(55589878-55589977)
chr4 (780-870)||(50796310-50796402)
chr4 (768-871)||(50381313-50381417)
chr4 (768-819)||(37193176-37193227)
chr4 (745-823)||(53841480-53841558)
chr4 (833-871)||(56052682-56052720)
[»] chr5 (3 HSPs)
chr5 (761-869)||(32657896-32658005)
chr5 (777-868)||(30670438-30670530)
chr5 (769-865)||(8004161-8004258)


Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 193 - 549
Target Start/End: Complemental strand, 36682727 - 36682364
Alignment:
Q  193 ttacaatctctcgtgtttggttcaaaagagagattgataagagagacaaaatcatgtggggcctttgcctgttccatttctcttcggaagtgcgaagaaa 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  36682727 ttacaatctctcgtgtttggttcaaaagagagattgataagagagacaaaatcatgtgggacccttgcctgtttcatttctcttcggaagtgcgaagaaa 36682628  T
Q  293 gggagtggaagcgtgannnnnnngttattttccatatttatcc----------ctggtgtggtgtggatgacgacatacaaagtatatannnnnnnnnnn 382  Q
    ||||||||||||||||       ||||||||||||||||||||          |||||||||||||||||||||||||||||||||||                
T  36682627 gggagtggaagcgtgatttttttgttattttccatatttatccttgtttatccctggtgtggtgtggatgacgacatacaaagtatat---ttttttttt 36682531  T
Q  383 acgtaatatattctaaagatttttgttctagcagtcgaaacggaagctgagcagacataccacaaacgcaattgatctttgccttttcctcatgcctatt 482  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36682530 acgtagtatattctgaagatttttgttctagcagtcgaaacggaagctgagcagacataccacaaacgcaattgatctttgccttttcctcatgcctatt 36682431  T
Q  483 acatataaataaaattggactatttttgttttgacagaataaaattgaactattggtaactcacgaa 549  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36682430 acatataaataaaattggactatttttgttttgacagaataaaattgaactatcggtaactcacgaa 36682364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 728 - 871
Target Start/End: Complemental strand, 36682188 - 36682053
Alignment:
Q  728 gtatactatctttctttgtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaa 826  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |         |||||||||||||||| |||||    
T  36682188 gtatactatctttctttgtataagggtattacggtctttataaaaagtaaacacacttctttcttctct---------atttctctcttgtaccaaacaa 36682098  T
Q  827 catgtaaaatctaccctatttctcatctatttctctcttttcata 871  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  36682097 catgtaaaatctaccctatttctcatctatttctctcttttcata 36682053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 36682834 - 36682764
Alignment:
Q  86 tgtgaaacatgaggttggatgcatattcaaacatagactttacactgtgtttggtagaggtgaattatgaa 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36682834 tgtgaaacatgaggttggatgcatattcaaacatagactttacactgtgtttggtagaggtgaattatgaa 36682764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 36683633 - 36683553
Alignment:
Q  8 aactaaggtaaaaatgcgcgtttattcaaaagctatggtttggagcgtccgaaaagttagtgcaaaactactttaggatgt 88  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  36683633 aactaaggtaaaaatgtgcgtttattcaaaagctatggtttggagcttccaaaaagttagtgcaaaactactttaggatgt 36683553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 749 - 865
Target Start/End: Complemental strand, 43051912 - 43051795
Alignment:
Q  749 aagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccctattt 847  Q
    |||| |||| |||||||| |||||| | |||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||  |||||    
T  43051912 aaggatattttggtcttttcaaaaatttaacacacttctttcttctttatttctctcacttctctcttgtaccaaacaatatgtcaaatctactatattt 43051813  T
Q  848 ctcatctatttctctctt 865  Q
    |||| |||||||||||||    
T  43051812 ctcacctatttctctctt 43051795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 761 - 869
Target Start/End: Original strand, 33249523 - 33249632
Alignment:
Q  761 gtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccctatttctcatctatttc 859  Q
    |||||| |||||| |||||||||||||||||  | |||||||||| ||  ||||||||||| ||||| |||| ||||||||  ||||| ||||||||| |    
T  33249523 gtcttttcaaaaattaaacacacttctttctcttctatttctctctttcttctcttgtaccaaacaatatgtcaaatctactatatttttcatctattgc 33249622  T
Q  860 tctcttttca 869  Q
    ||||||||||    
T  33249623 tctcttttca 33249632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 746 - 865
Target Start/End: Complemental strand, 46290602 - 46290482
Alignment:
Q  746 tataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctacccta 844  Q
    ||||||| |||| |||| ||| |||||| |||||| |||| |||||||| |||||||||| ||  ||||||||||| |||||    | ||||||||| ||    
T  46290602 tataaggatattttggtattttcaaaaattaaacatacttttttcttctctatttctctctttcttctcttgtaccaaacaatccatcaaatctaccata 46290503  T
Q  845 tttctcatctatttctctctt 865  Q
    |||||||||| ||||||||||    
T  46290502 tttctcatctctttctctctt 46290482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 850
Target Start/End: Original strand, 30685258 - 30685340
Alignment:
Q  769 aaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccctatttctc 850  Q
    ||||| ||| ||||||||||||| || |||||||||| ||||||||||||||| ||||  |||| |||||||| |||||||||    
T  30685258 aaaaattaatcacacttctttctcctctatttctctcttttctctcttgtaccaaacactatgtgaaatctactctatttctc 30685340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 761 - 869
Target Start/End: Original strand, 14238700 - 14238809
Alignment:
Q  761 gtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttc 859  Q
    |||||| |||||| ||||||||||||| |||  | |||||||||| ||  |||| ||||| || ||| || | ||||||||  |||||||||||||||||    
T  14238700 gtcttttcaaaaattaaacacacttctctctcttctatttctctctttcttctcatgtactaaacaatatatcaaatctactatatttctcatctatttc 14238799  T
Q  860 tctcttttca 869  Q
    ||||||||||    
T  14238800 tctcttttca 14238809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 745 - 868
Target Start/End: Complemental strand, 42271162 - 42271039
Alignment:
Q  745 gtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccct 843  Q
    ||||| ||||||| | ||||||  ||||| |||||||||||||||||  | |||||||||  |||||||||| |||| ||||| || | |||||||| ||    
T  42271162 gtataggggtattttagtctttttaaaaa-taaacacacttctttctcttctatttctcttctttctctcttataccaaacaatatctcaaatctactct 42271064  T
Q  844 atttctcatctatttctctcttttc 868  Q
     ||||||||| | ||||||||||||    
T  42271063 ttttctcatcaacttctctcttttc 42271039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 780 - 865
Target Start/End: Complemental strand, 22644004 - 22643918
Alignment:
Q  780 acacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctctt 865  Q
    ||||||||||||||| ||||||| | || |||||||| |||||| ||| |  | |||||||| ||||||||||||| ||||||||||    
T  22644004 acacttctttcttctctatttcttttatatctctcttctaccaaacaatacatcaaatctactctatttctcatctttttctctctt 22643918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 787 - 870
Target Start/End: Complemental strand, 33614219 - 33614135
Alignment:
Q  787 tttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctcttttcat 870  Q
    |||||||| ||||||| | || |||||||| |||||| ||| |  | |||||||| ||||||||||||| |||||||||||||||    
T  33614219 tttcttctctatttcttttatatctctcttctaccaaacaatacctcaaatctactctatttctcatctttttctctcttttcat 33614135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 785 - 871
Target Start/End: Complemental strand, 41988064 - 41987977
Alignment:
Q  785 tctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctcttttcata 871  Q
    |||||||  |||||||||||||||| |||||| |||||| | ||  || |||||||| |||||| | ||||||||||||||| |||||    
T  41988064 tctttctcttttatttctctcatttttctcttataccaaacgacccgtgaaatctactctattttttatctatttctctcttctcata 41987977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 833 - 871
Target Start/End: Complemental strand, 35396096 - 35396058
Alignment:
Q  833 aaatctaccctatttctcatctatttctctcttttcata 871  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  35396096 aaatctactctatttctcatctatttctttcttttcata 35396058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 737 - 865
Target Start/End: Original strand, 52253751 - 52253880
Alignment:
Q  737 ctttctttgtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaa 835  Q
    ||||||| |||||||| |||| ||||||||  ||||| |||||||||||||||||||| |||||||||  ||||||||||||||| |||||| | | |||    
T  52253751 ctttcttagtataaggatattttggtctttttaaaaattaaacacacttctttcttctatatttctcttctttctctcttgtaccaaacaacctatcaaa 52253850  T
Q  836 tctaccctatttctcatctatttctctctt 865  Q
    |||||  |||||||||||| ||||||||||    
T  52253851 tctactatatttctcatctctttctctctt 52253880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 769 - 871
Target Start/End: Original strand, 1471601 - 1471704
Alignment:
Q  769 aaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccctatttctcatctatttctctctttt 867  Q
    ||||| ||| ||||||||||| | || |||||||||| ||||||||||||||| ||||  |||| |||||||| |||||||| ||||||||||||||||     
T  1471601 aaaaattaatcacacttctttatcctctatttctctcttttctctcttgtaccaaacactatgtgaaatctactctatttcttatctatttctctctttc 1471700  T
Q  868 cata 871  Q
    ||||    
T  1471701 cata 1471704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 737 - 871
Target Start/End: Original strand, 46443842 - 46443977
Alignment:
Q  737 ctttctttgtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgt-accaacaacatgtaaaa 835  Q
    ||||||| |||||||| |||| ||||||||   |||| ||||||||||||| |||||| |||||||||| ||||||||| || || |||||| | | |||    
T  46443842 ctttcttagtataaggatattttggtctttttcaaaattaaacacacttctctcttctctatttctctcctttctctctcgtaacaaacaacctattaaa 46443941  T
Q  836 tctaccctatttctcatctatttctctcttttcata 871  Q
    ||||| |||||||||   |||||||||||| |||||    
T  46443942 tctactctatttctctcttatttctctcttctcata 46443977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 865
Target Start/End: Complemental strand, 43659229 - 43659100
Alignment:
Q  737 ctttctttgtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaa 835  Q
    ||||||| |||||||  |||| ||||||||  ||||| |||| ||| ||||||||||| ||||| | |  ||||||||||||||| ||||||   | |||    
T  43659229 ctttcttagtataagaatattttggtctttttaaaaattaaatacatttctttcttctatatttattttctttctctcttgtaccaaacaacccatcaaa 43659130  T
Q  836 tctaccctatttctcatctatttctctctt 865  Q
    ||||| ||||| ||||| | ||||||||||    
T  43659129 tctactctattcctcatttctttctctctt 43659100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 796 - 865
Target Start/End: Original strand, 24346174 - 24346244
Alignment:
Q  796 tatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctctt 865  Q
    |||||||||||| |||||||| |||||| |||||  | |||||||| ||||||||||  ||||||||||||    
T  24346174 tatttctctcatatctctcttataccaaacaacacatcaaatctactctatttctcacatatttctctctt 24346244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 833 - 871
Target Start/End: Complemental strand, 24929188 - 24929150
Alignment:
Q  833 aaatctaccctatttctcatctatttctctcttttcata 871  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  24929188 aaatctactctatttctcatctatttctctcttctcata 24929150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 796 - 865
Target Start/End: Complemental strand, 43885028 - 43884958
Alignment:
Q  796 tatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctctt 865  Q
    |||||||||||| |||||||| |||||| |||||  | |||||||| ||||||||||  ||||||||||||    
T  43885028 tatttctctcatatctctcttataccaaacaacacatcaaatctactctatttctcacatatttctctctt 43884958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 728 - 869
Target Start/End: Original strand, 11577523 - 11577665
Alignment:
Q  728 gtatactatctttctttgtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgt-accaacaa 826  Q
    ||||| || ||||||| |||||||| |||| |||| ||| |||||| ||||||||||||| |||||| ||||||||||||||||||||||| || |||||    
T  11577523 gtatattaactttcttagtataaggatattttggtattttcaaaaattaaacacacttctctcttctctatttctctcatttctctcttgtaacaaacaa 11577622  T
Q  827 catgtaaaatctaccctatttctcatctatttctctcttttca 869  Q
    |   | |||||||| ||||||||||  | ||||||| ||||||    
T  11577623 ctaattaaatctactctatttctcacttttttctcttttttca 11577665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 833 - 871
Target Start/End: Complemental strand, 9349281 - 9349243
Alignment:
Q  833 aaatctaccctatttctcatctatttctctcttttcata 871  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  9349281 aaatctactctatttctcatctatttctttcttttcata 9349243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 745 - 865
Target Start/End: Original strand, 9225058 - 9225179
Alignment:
Q  745 gtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccct 843  Q
    |||||||| ||||  |||||||  ||||| |||| ||||||||||||||| ||||||||| ||||||||||| |||| |||||| | | |||||||| ||    
T  9225058 gtataaggatatttcggtctttttaaaaattaaatacacttctttcttctctatttctcttatttctctcttataccaaacaacctatcaaatctacact 9225157  T
Q  844 atttctcatctatttctctctt 865  Q
    ||||||||||| ||||||||||    
T  9225158 atttctcatctctttctctctt 9225179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 746 - 869
Target Start/End: Original strand, 38376393 - 38376517
Alignment:
Q  746 tataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctacccta 844  Q
    ||||||| |||| |||||||| |||||| ||||||||||||||||| || |||||||||| ||  ||||||||||| |||||    | ||||||||||||    
T  38376393 tataaggatattttggtcttttcaaaaattaaacacacttctttctcctctatttctctctttcttctcttgtaccaaacaatccatcaaatctacccta 38376492  T
Q  845 tttctcatctatttctctcttttca 869  Q
    ||||||| || ||||||||||||||    
T  38376493 tttctcacctctttctctcttttca 38376517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 749 - 865
Target Start/End: Complemental strand, 39640632 - 39640515
Alignment:
Q  749 aagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgta-ccaacaacatgtaaaatctaccctattt 847  Q
    |||| |||| |||||||| || ||| | |||| ||| |||||||||||||||||||| ||||||||||||| | ||||| |||| || ||||| ||||||    
T  39640632 aaggatattttggtcttttcataaatttaacagactcctttcttctttatttctctcctttctctcttgtagcaaacaatatgtcaattctactctattt 39640533  T
Q  848 ctcatctatttctctctt 865  Q
    |||| |||||||||||||    
T  39640532 ctcacctatttctctctt 39640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 746 - 865
Target Start/End: Original strand, 4843328 - 4843448
Alignment:
Q  746 tataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctacccta 844  Q
    ||||||| |||| || |||||  ||||| |||||||||||||||||||| |||||||||  ||||||||||||||| ||||||   | ||||||||  ||    
T  4843328 tataaggatattttgatctttttaaaaattaaacacacttctttcttctatatttctcttctttctctcttgtaccaaacaacccatcaaatctacttta 4843427  T
Q  845 tttctcatctatttctctctt 865  Q
    |||||||||| ||||||||||    
T  4843428 tttctcatctctttctctctt 4843448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 745 - 865
Target Start/End: Original strand, 9272926 - 9273047
Alignment:
Q  745 gtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccct 843  Q
    |||||||| ||||  |||||||  ||||| |||||||||||||||||||| |||||||||  |||||||||| |||| || |||   | |||||||| ||    
T  9272926 gtataaggatatttcggtctttttaaaaattaaacacacttctttcttctctatttctcttctttctctcttataccaaataacccatcaaatctacact 9273025  T
Q  844 atttctcatctatttctctctt 865  Q
    ||||||||||| ||||||||||    
T  9273026 atttctcatctctttctctctt 9273047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 777 - 865
Target Start/End: Complemental strand, 2317751 - 2317662
Alignment:
Q  777 aacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccctatttctcatctatttctctctt 865  Q
    ||||||||||| |||||| ||||||| ||||||||||||| |||| ||||| | || ||||||||  ||||||||| |||||| ||||||    
T  2317751 aacacacttctctcttctctatttctttcatttctctcttataccaaacaataggtcaaatctactatatttctcacctatttatctctt 2317662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 833 - 871
Target Start/End: Complemental strand, 6762659 - 6762621
Alignment:
Q  833 aaatctaccctatttctcatctatttctctcttttcata 871  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  6762659 aaatctactctatttctcatctatttctctcttctcata 6762621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 4e-19; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 865
Target Start/End: Complemental strand, 45337729 - 45337600
Alignment:
Q  737 ctttctttgtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaa 835  Q
    ||||||| |||||||| |||| || |||||  ||||| |||||||||||||||||||| |||||||||  ||||||| ||||||| |||||| |   |||    
T  45337729 ctttcttagtataaggatattttgatctttttaaaaattaaacacacttctttcttctatatttctcttctttctctattgtaccaaacaacttaccaaa 45337630  T
Q  836 tctaccctatttctcatctatttctctctt 865  Q
    | ||| ||||||||||||| ||||||||||    
T  45337629 tttactctatttctcatctttttctctctt 45337600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 745 - 865
Target Start/End: Original strand, 30725800 - 30725921
Alignment:
Q  745 gtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccct 843  Q
    |||||||| |||| ||||||||  ||||| |||||||| ||||||||  | |||||||||  |||||||||| |||||| ||| || | |||||||| ||    
T  30725800 gtataaggatattttggtctttttaaaaactaaacacatttctttctcttctatttctcttctttctctcttataccaaacaatatctcaaatctactct 30725899  T
Q  844 atttctcatctatttctctctt 865  Q
    |||||||||| | |||||||||    
T  30725900 atttctcatcaacttctctctt 30725921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 745 - 865
Target Start/End: Original strand, 34918321 - 34918442
Alignment:
Q  745 gtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgt-accaacaacatgtaaaatctaccct 843  Q
    |||||||| |||| || ||||| |||||| |||  |||||||| |||||| ||||||||||||||||||||||| || |||||| | | |||||||| ||    
T  34918321 gtataaggatattttgatcttttcaaaaattaagaacacttctctcttctctatttctctcatttctctcttgtaacaaacaacctattaaatctactct 34918420  T
Q  844 atttctcatctatttctctctt 865  Q
    |||| ||| || ||| ||||||    
T  34918421 atttttcacctttttatctctt 34918442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 745 - 865
Target Start/End: Complemental strand, 52906945 - 52906824
Alignment:
Q  745 gtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccct 843  Q
    |||||||| |||| | ||||||  ||||| |||||||||||||||||  | ||| |||||  |||||||||| |||| ||||| || | |||||||| ||    
T  52906945 gtataaggatattttagtctttttaaaaactaaacacacttctttctcttctatctctcttctttctctcttataccaaacaatatctcaaatctactct 52906846  T
Q  844 atttctcatctatttctctctt 865  Q
    |||||||||| | |||||||||    
T  52906845 atttctcatcaacttctctctt 52906824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 770 - 871
Target Start/End: Complemental strand, 11523257 - 11523157
Alignment:
Q  770 aaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctcttttc 868  Q
    |||| ||||||||||||| |||  | |||||||||| |||||||  | |||||| ||||   | |||||||| |||||||||||||||||||||||||||    
T  11523257 aaaattaaacacacttctctctcttctatttctctcctttctct--tctaccaagcaacccatcaaatctactctatttctcatctatttctctcttttc 11523160  T
Q  869 ata 871  Q
    |||    
T  11523159 ata 11523157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 775 - 869
Target Start/End: Complemental strand, 41318551 - 41318456
Alignment:
Q  775 taaacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctcttttca 869  Q
    |||||||||||||||||  | |||||||||||| | |||||| || ||| ||||   | |||||||| |||||||||||||||||||||| |||||    
T  41318551 taaacacacttctttctcttctatttctctcatctttctcttatatcaaacaactcatcaaatctactctatttctcatctatttctctcctttca 41318456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 761 - 869
Target Start/End: Original strand, 5042182 - 5042291
Alignment:
Q  761 gtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttc 859  Q
    |||||| |||||| ||||||||||||| |||  | |||||||||| ||  |||| |||| ||| ||| || | |||| ||| || |||||||||||||||    
T  5042182 gtcttttcaaaaattaaacacacttctctctcttctatttctctctttcttctcatgtatcaaacaatatatcaaatatactctgtttctcatctatttc 5042281  T
Q  860 tctcttttca 869  Q
    ||||||||||    
T  5042282 tctcttttca 5042291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 745 - 862
Target Start/End: Original strand, 33099556 - 33099674
Alignment:
Q  745 gtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccct 843  Q
    |||||||| |||| ||||| ||  ||||| |||||||||||||||||||| ||||||| |  ||||||||||||||| ||||||   | |||||||| ||    
T  33099556 gtataaggatattttggtccttttaaaaattaaacacacttctttcttctatatttcttttctttctctcttgtaccaaacaacccatcaaatctactct 33099655  T
Q  844 atttctcatctatttctct 862  Q
    ||||||||||| |||||||    
T  33099656 atttctcatctctttctct 33099674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 833 - 870
Target Start/End: Original strand, 22914488 - 22914525
Alignment:
Q  833 aaatctaccctatttctcatctatttctctcttttcat 870  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  22914488 aaatctactctatttctcatctttttctctcttttcat 22914525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 780 - 852
Target Start/End: Original strand, 25980746 - 25980819
Alignment:
Q  780 acacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccctatttctcat 852  Q
    ||||||||||||||| ||||||| |||| | |||||| |||| ||||| |  |||||||||| |||||||||||    
T  25980746 acacttctttcttctctatttctttcatctttctcttataccaaacaatacataaaatctactctatttctcat 25980819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 748 - 865
Target Start/End: Original strand, 38236141 - 38236259
Alignment:
Q  748 taagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtac-caacaacatgtaaaatctaccctatt 846  Q
    ||||| |||| |||||||| |||||  | ||||||||||| |||||| |||||||||||||| |||||| |||  ||||| | || |||||||| |||||    
T  38236141 taaggatattttggtcttttcaaaagtttaacacacttctctcttctctatttctctcatttatctcttatactaaacaataggtcaaatctactctatt 38236240  T
Q  847 tctcatctatttctctctt 865  Q
    ||||| |||||||||||||    
T  38236241 tctcacctatttctctctt 38236259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 754 - 865
Target Start/End: Complemental strand, 44937188 - 44937076
Alignment:
Q  754 tattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccctatttctcat 852  Q
    |||| ||||||||  ||||| |||||||||||||||||||| |||||||||  ||| ||||||||||| ||||||   | ||||||||  ||||||||||    
T  44937188 tattttggtctttttaaaaattaaacacacttctttcttctatatttctcttctttttctcttgtaccaaacaacccatcaaatctactatatttctcat 44937089  T
Q  853 ctatttctctctt 865  Q
    || ||||||||||    
T  44937088 ctctttctctctt 44937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 761 - 869
Target Start/End: Complemental strand, 33572099 - 33571990
Alignment:
Q  761 gtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttc 859  Q
    |||||| |||||| ||||||||||||| |||  | |||||||||| ||  |||| |||||||| ||| || | |||||||| || |||||||||||||||    
T  33572099 gtcttttcaaaaattaaacacacttctctctcttctatttctctctttcttctcatgtaccaaacaatatatcaaatctactctgtttctcatctatttc 33572000  T
Q  860 tctcttttca 869  Q
    ||||||||||    
T  33571999 tctcttttca 33571990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 865
Target Start/End: Complemental strand, 41326734 - 41326605
Alignment:
Q  737 ctttctttgtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaa 835  Q
    ||||||| |||||||| |||| ||||||||  ||||| |||||||| ||||||||||| ||||| | |  ||||||||||||||| ||||||   | |||    
T  41326734 ctttcttagtataaggatattttggtctttttaaaaattaaacacatttctttcttctatatttattttctttctctcttgtaccaaacaacccatcaaa 41326635  T
Q  836 tctaccctatttctcatctatttctctctt 865  Q
    ||||| ||| ||||||| | ||||||||||    
T  41326634 tctactctaattctcatttctttctctctt 41326605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 854
Target Start/End: Complemental strand, 33633223 - 33633137
Alignment:
Q  769 aaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtacc-aacaacatgtaaaatctaccctatttctcatct 854  Q
    ||||| |||||||||||||||||||| |||||||||  |||||||||| |||| ||||||   | |||||||| |||||||||||||    
T  33633223 aaaaattaaacacacttctttcttctctatttctcttctttctctcttataccaaacaacccatcaaatctacactatttctcatct 33633137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 196 - 301
Target Start/End: Original strand, 41590644 - 41590748
Alignment:
Q  196 caatctctcgtgtttggttcaaaagagagattgataagagagacaaaatcatgtggggcctttgcctgttccatttctcttcggaagtgcgaagaaaggg 295  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||  || | ||||| ||  ||||| || |||||||||  | | ||||||||||||||    
T  41590644 caatctctcgtgtttggtt-aaaagagagattaagaagagagacagtattaggtgggacccatgcctttttcatttctctctgcatgtgcgaagaaaggg 41590742  T
Q  296 agtgga 301  Q
    ||||||    
T  41590743 agtgga 41590748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 777 - 868
Target Start/End: Complemental strand, 10310707 - 10310615
Alignment:
Q  777 aacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctcttttc 868  Q
    |||||||||||||||  | |||||||||  |||||||||| |||||| ||| || | |||||||| |||||||||||| | ||||||||||||    
T  10310707 aacacacttctttctcttctatttctcttctttctctcttataccaaacaatatcttaaatctactctatttctcatcaacttctctcttttc 10310615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 866
Target Start/End: Complemental strand, 55589977 - 55589878
Alignment:
Q  769 aaaaagtaaacacacttctttcttctttatttctctcatttc-tctcttgtacc-aacaacatgtaaaatctaccctatttctcatctatttctctcttt 866  Q
    ||||| |||||||||||||||||||| ||||||| |  |||| ||||||||||| |||||| | | ||||||||  |||||||||||  |||||||||||    
T  55589977 aaaaattaaacacacttctttcttctatatttcttttttttcttctcttgtaccaaacaacctatcaaatctactatatttctcatccctttctctcttt 55589878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 780 - 870
Target Start/End: Complemental strand, 50796402 - 50796310
Alignment:
Q  780 acacttctttcttctttatttctctcatttctctcttgtaccaa--caacatgtaaaatctaccctatttctcatctatttctctcttttcat 870  Q
    ||||||||||||| |  |||||||| || | |||||| ||||||  |||| | | |||||||| |||||||||||||||||||||||| ||||    
T  50796402 acacttctttcttttcaatttctcttatctttctcttataccaaaacaacctatcaaatctactctatttctcatctatttctctcttctcat 50796310  T

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Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 768 - 871
Target Start/End: Complemental strand, 50381417 - 50381313
Alignment:
Q  768 caaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaacaac-atgtaaaatctaccctatttctcatctatttctctcttt 866  Q
    |||||| ||| |||| |||||||| || |||||||| | ||||||||| |||||||  || |||| ||||| || |||||||||||| | ||||||||||    
T  50381417 caaaaattaatcacatttctttctcctctatttctcccctttctctctagtaccaaacactatgtgaaatccactctatttctcatcaacttctctcttt 50381318  T
Q  867 tcata 871  Q
     ||||    
T  50381317 ccata 50381313  T

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Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 819
Target Start/End: Original strand, 37193176 - 37193227
Alignment:
Q  768 caaaaagtaaacacacttctttcttctttatttctctcatttctctcttgta 819  Q
    |||||| ||| ||||||||||||| || |||||||||| |||||||||||||    
T  37193176 caaaaattaatcacacttctttctcctctatttctctcctttctctcttgta 37193227  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 745 - 823
Target Start/End: Original strand, 53841480 - 53841558
Alignment:
Q  745 gtataagggtattatggtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaa 823  Q
    |||||||| |||| | |||||| |||||| |||||||||||||||||  | ||||||| |  |||||||||| ||||||    
T  53841480 gtataaggatattttagtcttttcaaaaattaaacacacttctttctcttctatttctattctttctctcttataccaa 53841558  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 833 - 871
Target Start/End: Original strand, 56052682 - 56052720
Alignment:
Q  833 aaatctaccctatttctcatctatttctctcttttcata 871  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  56052682 aaatctactatatttctcatctatttctctcttttcata 56052720  T

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Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 761 - 869
Target Start/End: Complemental strand, 32658005 - 32657896
Alignment:
Q  761 gtctttacaaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttc 859  Q
    |||||| |||||| ||||||||||||| |||  | |||||||||| ||  |||| | |||||| ||| || | |||||||| ||||||||||||||||||    
T  32658005 gtcttttcaaaaattaaacacacttctctctcttctatttctctctttcttctcatataccaaacaatatatcaaatctactctatttctcatctatttc 32657906  T
Q  860 tctcttttca 869  Q
    ||||||||||    
T  32657905 tctcttttca 32657896  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 777 - 868
Target Start/End: Complemental strand, 30670530 - 30670438
Alignment:
Q  777 aacacacttctttcttctttatttctctcatttctctcttgtaccaa-caacatgtaaaatctaccctatttctcatctatttctctcttttc 868  Q
    |||||||||||||||  | |||||||||  |||||||||| |||||| ||| || | |||||||| |||||||||||| | ||||||||||||    
T  30670530 aacacacttctttctcttctatttctcttctttctctcttataccaaacaatatctcaaatctactctatttctcatcaacttctctcttttc 30670438  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 769 - 865
Target Start/End: Original strand, 8004161 - 8004258
Alignment:
Q  769 aaaaagtaaacacacttctttcttctttatttctctcatttctctcttgtaccaac-aacatgtaaaatctaccctatttctcatctatttctctctt 865  Q
    ||||| |||||||||||||||||| | |||||||||  |||||| ||| || |||  || || | |||||||| |||||||||||| |||||||||||    
T  8004161 aaaaattaaacacacttctttcttttctatttctcttctttctcacttatatcaaataatatctcaaatctactctatttctcatcaatttctctctt 8004258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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