View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5845_low_20 (Length: 251)

Name: NF5845_low_20
Description: NF5845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5845_low_20
NF5845_low_20
[»] chr2 (19 HSPs)
chr2 (18-251)||(39215442-39215676)
chr2 (19-246)||(39369919-39370147)
chr2 (19-250)||(39459063-39459295)
chr2 (53-250)||(39473409-39473607)
chr2 (132-251)||(39192439-39192558)
chr2 (132-251)||(39198119-39198238)
chr2 (90-251)||(39222767-39222929)
chr2 (73-247)||(39397852-39398027)
chr2 (132-247)||(39468264-39468379)
chr2 (132-220)||(39137807-39137895)
chr2 (132-251)||(39414781-39414900)
chr2 (90-251)||(39161724-39161886)
chr2 (90-251)||(39207308-39207470)
chr2 (107-251)||(39389136-39389281)
chr2 (53-184)||(39152429-39152561)
chr2 (136-251)||(39381510-39381625)
chr2 (135-250)||(39421832-39421947)
chr2 (22-108)||(39414883-39414969)
chr2 (133-231)||(39494461-39494559)
[»] chr6 (1 HSPs)
chr6 (90-247)||(16113181-16113339)
[»] chr7 (2 HSPs)
chr7 (132-220)||(19807757-19807845)
chr7 (41-149)||(19807623-19807732)


Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 39215442 - 39215676
Alignment:
Q  18 atttaaaggtcaagtggaggagcttgaatcaaatgaggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaaagccaagtt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39215442 atttaaaggtcaagtggaggagcttgaatcaaatgaggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaaagacaagtt 39215541  T
Q  118 gagagctttgaatcaaa-gagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaa 216  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39215542 gagagctttgaatcaaaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaa 39215641  T
Q  217 aagagaagcagtttggaggacaagtcaaggatcct 251  Q
    |||||||||||||||||||||||||||||||||||    
T  39215642 aagagaagcagtttggaggacaagtcaaggatcct 39215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 39369919 - 39370147
Alignment:
Q  19 tttaaaggtcaagtggaggagcttgaatcaaatgaggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaaagccaagttg 118  Q
    |||||||||| |||| ||| |||||||||||| |||||||||||  |||| || ||||||||| |||  | | ||| |||||||||||||| |||||| |    
T  39369919 tttaaaggtcgagtgaaggtgcttgaatcaaaggaggaggaatttgaaggtcgagttaaggagttcaagtcagaaaggaagcaatttgaaacccaagtcg 39370018  T
Q  119 agagctttgaatc-aaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaa 217  Q
    ||  |||  |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||||| | |||||    
T  39370019 agcacttcaaatcgaaagaaaagcaatttgaaggacggtggaaagaacttgagttaaaagagaacaagttcatagtgcaggtgaaggagttcgaattaaa 39370118  T
Q  218 agagaagcagtttggaggacaagtcaagg 246  Q
    |||||||||||||||| ||||||||||||    
T  39370119 agagaagcagtttggaagacaagtcaagg 39370147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 39459063 - 39459295
Alignment:
Q  19 tttaaaggtcaagtggaggagcttgaatcaaatgaggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaaagccaagttg 118  Q
    ||||||||||||| | ||||| ||||||||||| |||||||||||||||| | ||||||| |||||| || ||||||||||||||||||||||||  |||    
T  39459063 tttaaaggtcaagggaaggagtttgaatcaaataaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaaagccagtttg 39459162  T
Q  119 agagctttgaa-tcaaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaa 217  Q
    ||  |||  || | ||||||||||||||||||| || | |||||||| | ||     |||||||||||||||||||||  || || ||| ||||||||||    
T  39459163 aggacttcaaattaaaagagaagcaatttgaagaacagcggaaagaattcgatgctgaagagaataagttcaaagtactagtgaaagagctcaagttaaa 39459262  T
Q  218 agagaagcagtttggaggacaagtcaaggatcc 250  Q
    ||| ||||| |||| ||||||||||||||||||    
T  39459263 agacaagcaatttgaaggacaagtcaaggatcc 39459295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 39473607 - 39473409
Alignment:
Q  53 aggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaaagccaagttgagagctttgaatcaa-agagaagcaatttgaagg 151  Q
    |||||||||||||||| |||||||||||||| |  | |||||||||||||||| ||| | | ||||||   ||  |||||| || ||||||||||||||     
T  39473607 aggaggaattcaaaggtcgggttaaggagcttaaataaaaaaagaagcaatttaaaaccaaggttgaggaattcaaatcaatagcgaagcaatttgaaga 39473508  T
Q  152 acggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcc 250  Q
    ||| ||||||||||| |||| |||||||||||||||||||||||  || |||    |||||||||||||||||||| ||| |||| ||||| |||||||    
T  39473507 acgatggaaagaactcgagtcaaaagagaataagttcaaagtactagtgaagtcactcaagttaaaagagaagcaggttgaaggagaagtcgaggatcc 39473409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 39192558 - 39192439
Alignment:
Q  132 aaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttg 231  Q
    |||||||||||||| |||||||| ||||  |||||||||| |||||||||||||||||||| | |||| |||||| |||| |||||||| ||||||||||    
T  39192558 aaagagaagcaattagaaggacgatggagtgaacttgagtcaaaagagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagcagtttg 39192459  T
Q  232 gaggacaagtcaaggatcct 251  Q
     ||||| |||||||||||||    
T  39192458 aaggactagtcaaggatcct 39192439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 39198238 - 39198119
Alignment:
Q  132 aaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttg 231  Q
    |||||||||||||| |||||||| ||||  |||||||||| |||||||||||||||||||| | |||| |||||| |||| |||||||| ||||||||||    
T  39198238 aaagagaagcaattagaaggacgatggagtgaacttgagtcaaaagagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagcagtttg 39198139  T
Q  232 gaggacaagtcaaggatcct 251  Q
     ||||| |||||||||||||    
T  39198138 aaggactagtcaaggatcct 39198119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 251
Target Start/End: Original strand, 39222767 - 39222929
Alignment:
Q  90 aaaaaagaagcaatttgaaagccaagttgagagctttgaatcaaa-gagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttc 188  Q
    |||||||||||| || ||||||||||| |||   ||| ||||||| |||||||||||||||| ||| |||||  ||||||||| | ||||||||||||||    
T  39222767 aaaaaagaagcatttcgaaagccaagtcgaggagtttaaatcaaaagagaagcaatttgaagaacgatggaataaacttgagtcagaagagaataagttc 39222866  T
Q  189 aaagtacaggtaaaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcct 251  Q
    |||| | |||| |||||| |||| || ||||| |||  ||||| |||||||||||||||||||    
T  39222867 aaagcaaaggtgaaggagctcaacttcaaagaaaagtggtttgaaggacaagtcaaggatcct 39222929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 247
Target Start/End: Complemental strand, 39398027 - 39397852
Alignment:
Q  73 gttaaggagctcagtttaaaaaagaagcaatttgaaagccaagttgagagctttgaatc-aaagagaagcaatttgaaggacggtggaaagaacttgagt 171  Q
    ||||||||||||   ||| |||| ||||| ||||||||||||||||||   ||  |||| ||||| |||||| |||||| |||||||||| |||||||||    
T  39398027 gttaaggagctcgaattacaaaataagcactttgaaagccaagttgaggatttcaaatcaaaagataagcaaattgaagaacggtggaaaaaacttgagt 39397928  T
Q  172 taaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttggaggacaagtcaagga 247  Q
     |||||||||| ||||||||||| ||||  ||||| |  ||||||||||||||||| ||| ||| | |||||||||    
T  39397927 caaaagagaatcagttcaaagtaaaggtgcaggagcttgagttaaaagagaagcaggttgcaggtcgagtcaagga 39397852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 39468264 - 39468379
Alignment:
Q  132 aaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttg 231  Q
    ||||| ||||||||||| | |||||| |||||| |  ||| ||||||||||  |||||||||| |||| ||||||||||||||||||||||||||| |||    
T  39468264 aaagataagcaatttgatgaacggtgtaaagaattgaagtcaaaagagaatcggttcaaagtaaaggtgaaggagttcaagttaaaagagaagcagattg 39468363  T
Q  232 gaggacaagtcaagga 247  Q
     |||||||||||||||    
T  39468364 aaggacaagtcaagga 39468379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 39137807 - 39137895
Alignment:
Q  132 aaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaaga 220  Q
    |||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||| || ||| |||||||||||||    
T  39137807 aaagagaagcaaattgaagaacggtggaaagaactcgagtcaaaagagaataagttcaaagtactggtcaaagagctcaagttaaaaga 39137895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 39414900 - 39414781
Alignment:
Q  132 aaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttg 231  Q
    ||||||||||||||||||| ||| |||||||||||  ||  ||| ||||||||||||||| ||| ||| || ||| |||||||||| ||||| |||||||    
T  39414900 aaagagaagcaatttgaagaacgatggaaagaactcaagacaaatgagaataagttcaaactactggtcaaagagctcaagttaaatgagaaacagtttg 39414801  T
Q  232 gaggacaagtcaaggatcct 251  Q
     ||||||||| |||||||||    
T  39414800 aaggacaagttaaggatcct 39414781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 251
Target Start/End: Original strand, 39161724 - 39161886
Alignment:
Q  90 aaaaaagaagcaatttgaaagccaagttgagagctttgaatcaaag-agaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttc 188  Q
    |||||| ||||| |||||||| |||||||||  |||  |||||||  |||| |||||||||||||||||||| ||||| |||   |||||| ||||| ||    
T  39161724 aaaaaataagcattttgaaagacaagttgaggacttcaaatcaaaacagaaacaatttgaaggacggtggaatgaactggagacgaaagagtataagctc 39161823  T
Q  189 aaagtacaggtaaaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcct 251  Q
    |||||| | |  |||||| |||| |||||||| ||||| |||| |||||||||||||||||||    
T  39161824 aaagtaaatgagaaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaaggatcct 39161886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 251
Target Start/End: Complemental strand, 39207470 - 39207308
Alignment:
Q  90 aaaaaagaagcaatttgaaagccaagttgagagctttgaatcaaag-agaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttc 188  Q
    |||||| ||||| |||||||| |||||||||  |||  |||||||  |||| |||||||||||||||||||| ||||| |||   |||||| ||||| ||    
T  39207470 aaaaaataagcattttgaaagacaagttgaggacttcaaatcaaaacagaaacaatttgaaggacggtggaatgaactggagacgaaagagtataagctc 39207371  T
Q  189 aaagtacaggtaaaggagttcaagttaaaagagaagcagtttggaggacaagtcaaggatcct 251  Q
    |||||| | |  |||||| |||| |||||||| ||||| |||| |||||||||||||||||||    
T  39207370 aaagtaaatgagaaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaaggatcct 39207308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 39389281 - 39389136
Alignment:
Q  107 aaagccaagttgagagctttgaatcaaa-gagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaagga 205  Q
    ||||||||||||||  |||  ||||||| ||| ||| |||| || |||| ||||| ||||| ||||| |||||| |||||||||||||| |||| |||||    
T  39389281 aaagccaagttgaggacttcaaatcaaaagagcagcgatttaaaagacgatggaacgaactggagttgaaagagtataagttcaaagtaaaggtgaagga 39389182  T
Q  206 gttcaagttaaaagagaagcagtttggaggacaagtcaaggatcct 251  Q
    | |||| |||||||| |||||||||| ||| |||||||| ||||||    
T  39389181 gctcaacttaaaagaaaagcagtttgaagggcaagtcaacgatcct 39389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 39152429 - 39152561
Alignment:
Q  53 aggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaaagccaagttgagagctttgaatc-aaagagaagcaatttgaagg 151  Q
    |||||||||||||||| | |||||||||||| |  | |||||||||| ||||||||| ||| ||||||  |||  || | ||||||||||||||||||      
T  39152429 aggaggaattcaaaggtcaggttaaggagcttaaatcaaaaaagaagaaatttgaaatccaggttgaggacttcaaaacaaaagagaagcaatttgaaaa 39152528  T
Q  152 acggtggaaagaacttgagttaaaagagaataa 184  Q
    |||||||||||| || |||| ||||||||||||    
T  39152529 acggtggaaagagctcgagtcaaaagagaataa 39152561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 39381625 - 39381510
Alignment:
Q  136 agaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttggagg 235  Q
    ||||| ||||||||| |||   ||||||||  || | |||||||||| ||||||||||| || | || ||| |||||||||||||||||||||||| | |    
T  39381625 agaagaaatttgaagaacgaatgaaagaacacgaatcaaaagagaatgagttcaaagtaaagatgaatgagctcaagttaaaagagaagcagtttgaaag 39381526  T
Q  236 acaagtcaaggatcct 251  Q
    ||||| ||||||||||    
T  39381525 acaagacaaggatcct 39381510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 39421947 - 39421832
Alignment:
Q  135 gagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttggag 234  Q
    |||||| ||||||||| ||  |||||||||||  ||| |||||||||||||||||||||||  || || ||| |||| |||||||| ||||  |||||||    
T  39421947 gagaagaaatttgaagaacaatggaaagaactcaagtcaaaagagaataagttcaaagtactagtgaaagagctcaaattaaaagacaagcgatttggag 39421848  T
Q  235 gacaagtcaaggatcc 250  Q
     || ||||||||||||    
T  39421847 cactagtcaaggatcc 39421832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 39414969 - 39414883
Alignment:
Q  22 aaaggtcaagtggaggagcttgaatcaaatgaggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaa 108  Q
    |||||||||||| ||||| |||||||||| |||||||| |||||||| |  |||||||| ||||  | |||| ||||||||||||||    
T  39414969 aaaggtcaagtgaaggagtttgaatcaaaggaggaggagttcaaaggtcaagttaaggaactcaaatcaaaagagaagcaatttgaa 39414883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 39494559 - 39494461
Alignment:
Q  133 aagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaagagaagcagtttg 231  Q
    ||||||| ||||||||||||||  ||||||| |  |||| |||||| || |||||||||| ||| || |||||| | |||  |||||||||||||||||    
T  39494559 aagagaaacaatttgaaggacgagggaaagagccagagtcaaaagacaagaagttcaaagcacacgtgaaggagctgaagccaaaagagaagcagtttg 39494461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 16113181 - 16113339
Alignment:
Q  90 aaaaaagaagcaatttgaaagccaagttgagagctttgaatcaaa-gagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttc 188  Q
    |||||| ||||| || |||||||||||||||   ||  ||||||| || ||||||||||||| ||||||||||||||| || | |||||||||| |||||    
T  16113181 aaaaaataagcatttggaaagccaagttgagtatttcaaatcaaacgataagcaatttgaagaacggtggaaagaactcgaatcaaaagagaatcagttc 16113280  T
Q  189 aaagtacaggtaaaggagttcaagttaaaagagaagcagtttggaggacaagtcaagga 247  Q
    |||||| |||  |||||| |||||||||||||||||||| ||| || ||||||||||||    
T  16113281 aaagtaaaggagaaggagctcaagttaaaagagaagcagattgaagtacaagtcaagga 16113339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 19807757 - 19807845
Alignment:
Q  132 aaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaagttaaaaga 220  Q
    |||||||| ||| |||||| | ||||||||||||| |||| ||||||||||||||||||||||| ||| || ||| |||||||||||||    
T  19807757 aaagagaatcaaattgaagaaaggtggaaagaactcgagtcaaaagagaataagttcaaagtactggtcaaagagctcaagttaaaaga 19807845  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 19807623 - 19807732
Alignment:
Q  41 ttgaatcaaatgaggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaaagccaagttgagagctttgaatc-aaagagaa 139  Q
    |||||||||| || ||||  ||| |||| || ||||||||| |||  | ||||||||||||||| |||| ||||||||||  |||  |||| ||||||||    
T  19807623 ttgaatcaaaggatgaggggttcgaaggtcgagttaaggagttcaaataaaaaaagaagcaattcgaaaaccaagttgaggacttcaaatcaaaagagaa 19807722  T
Q  140 gcaatttgaa 149  Q
    |||| |||||    
T  19807723 gcaacttgaa 19807732  T

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