View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5845_low_25 (Length: 228)
Name: NF5845_low_25
Description: NF5845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5845_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 22986427 - 22986255
Alignment:
| Q |
32 |
aacctgtgcaaatgacctgaatggtggtggaaccgcagctgaaggtggaggctgcaactacgctgaagaagagggagctgtcggggcagcaaattcagcc |
131 |
Q |
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| T |
22986427 |
aacctgtgcaaatgacctaaatggtggtggaaccgcagctgaaggtggaggctgcacccacgctgcagaagagggagctatcggggcagcaaattcatcc |
22986328 |
T |
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| Q |
132 |
taccagtcaaaggacatggctgaaccgcgcgcagcagtgttataacggtggattatggccagaaaaatggtgatgat |
208 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
22986327 |
taccagtcaaaggacatggttgaaccgcgcgcagcagtgttataacggtgg----tggccagaaaaatggtgatgat |
22986255 |
T |
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