View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5848-Insertion-10 (Length: 379)

Name: NF5848-Insertion-10
Description: NF5848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5848-Insertion-10
NF5848-Insertion-10
[»] scaffold0005 (1 HSPs)
scaffold0005 (9-379)||(54505-54864)
[»] chr4 (17 HSPs)
chr4 (9-379)||(14784866-14785225)
chr4 (83-190)||(4698636-4698743)
chr4 (81-171)||(31240889-31240979)
chr4 (86-195)||(4698646-4698755)
chr4 (86-222)||(55292108-55292244)
chr4 (86-220)||(19485588-19485722)
chr4 (86-219)||(38687910-38688043)
chr4 (86-221)||(4758774-4758909)
chr4 (86-176)||(18135355-18135445)
chr4 (86-188)||(31854409-31854511)
chr4 (86-183)||(52535986-52536083)
chr4 (86-221)||(36099503-36099638)
chr4 (86-188)||(2385225-2385327)
chr4 (86-176)||(2411882-2411972)
chr4 (86-176)||(18430297-18430387)
chr4 (86-188)||(31227287-31227389)
chr4 (80-188)||(56216244-56216352)
[»] chr7 (8 HSPs)
chr7 (83-204)||(26563934-26564055)
chr7 (86-222)||(7107646-7107782)
chr7 (86-221)||(12763245-12763380)
chr7 (86-183)||(7463465-7463562)
chr7 (86-222)||(41850592-41850728)
chr7 (80-188)||(46449808-46449916)
chr7 (86-183)||(26563956-26564053)
chr7 (86-223)||(30866261-30866398)
[»] chr3 (20 HSPs)
chr3 (86-221)||(8243679-8243814)
chr3 (86-220)||(10049684-10049818)
chr3 (72-225)||(23825151-23825304)
chr3 (86-190)||(22003812-22003916)
chr3 (86-190)||(22011329-22011433)
chr3 (86-188)||(6086931-6087033)
chr3 (86-188)||(25846541-25846643)
chr3 (86-188)||(52114054-52114156)
chr3 (86-221)||(8243698-8243833)
chr3 (86-225)||(9465064-9465203)
chr3 (86-221)||(26999037-26999172)
chr3 (84-183)||(55139187-55139286)
chr3 (86-188)||(335405-335507)
chr3 (86-188)||(14768114-14768216)
chr3 (86-220)||(18765256-18765390)
chr3 (86-227)||(9440144-9440285)
chr3 (86-191)||(44593217-44593322)
chr3 (86-195)||(55139196-55139305)
chr3 (86-190)||(28564963-28565067)
chr3 (86-190)||(29019751-29019855)
[»] chr8 (9 HSPs)
chr8 (105-194)||(24255895-24255984)
chr8 (86-226)||(2229062-2229202)
chr8 (86-220)||(41915610-41915744)
chr8 (87-188)||(8242240-8242341)
chr8 (96-221)||(43135070-43135195)
chr8 (86-177)||(22781898-22781989)
chr8 (86-188)||(2339306-2339408)
chr8 (86-210)||(33642474-33642598)
chr8 (86-178)||(34028399-34028491)
[»] chr2 (14 HSPs)
chr2 (88-184)||(22857822-22857918)
chr2 (86-221)||(44737280-44737414)
chr2 (72-188)||(45065610-45065726)
chr2 (86-223)||(7765789-7765926)
chr2 (83-195)||(22857827-22857938)
chr2 (86-188)||(16241297-16241399)
chr2 (150-207)||(27182086-27182143)
chr2 (150-207)||(27831628-27831685)
chr2 (86-190)||(20427017-20427121)
chr2 (86-188)||(42263500-42263602)
chr2 (96-222)||(42341644-42341770)
chr2 (86-188)||(43657955-43658057)
chr2 (86-183)||(38598472-38598569)
chr2 (86-190)||(11711352-11711456)
[»] chr1 (9 HSPs)
chr1 (86-210)||(33325349-33325473)
chr1 (86-220)||(10065253-10065387)
chr1 (86-219)||(28989288-28989421)
chr1 (86-188)||(14281606-14281708)
chr1 (86-190)||(23398096-23398200)
chr1 (86-220)||(9548688-9548822)
chr1 (86-176)||(29312455-29312545)
chr1 (86-176)||(38830499-38830589)
chr1 (86-190)||(40161201-40161305)
[»] chr6 (7 HSPs)
chr6 (86-221)||(7405460-7405595)
chr6 (86-178)||(6045721-6045813)
chr6 (86-221)||(31971027-31971162)
chr6 (86-188)||(390835-390937)
chr6 (86-183)||(6047831-6047928)
chr6 (86-183)||(6801586-6801683)
chr6 (86-190)||(30686560-30686664)
[»] chr5 (17 HSPs)
chr5 (86-225)||(29374186-29374325)
chr5 (81-176)||(38393797-38393892)
chr5 (86-188)||(6910728-6910830)
chr5 (86-188)||(7749934-7750036)
chr5 (86-188)||(9601623-9601725)
chr5 (86-188)||(37699810-37699912)
chr5 (86-183)||(7945853-7945950)
chr5 (86-222)||(25027710-25027846)
chr5 (86-221)||(13144896-13145031)
chr5 (86-221)||(23411181-23411316)
chr5 (86-188)||(31802988-31803090)
chr5 (86-188)||(41989580-41989682)
chr5 (86-190)||(2959267-2959371)
chr5 (86-190)||(2967736-2967840)
chr5 (81-209)||(14338824-14338952)
chr5 (86-222)||(26898207-26898343)
chr5 (86-210)||(42311818-42311942)
[»] scaffold0123 (1 HSPs)
scaffold0123 (86-188)||(29260-29362)
[»] scaffold0002 (1 HSPs)
scaffold0002 (86-188)||(492335-492437)


Alignment Details
Target: scaffold0005 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 9 - 379
Target Start/End: Original strand, 54505 - 54864
Alignment:
Q  9 ctcagatcagtaatgttcaacagcttgagattgttacaggtttgtatataatcttcttttgaatccctacaattctttttacaagaaacaatttagtttt 108  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  54505 ctcagatcagtaatgttcagcagcttgagattgttacaggtttgtatataatcttcttttgaatccctacgattctttttacaagaaacaatttattttt 54604  T
Q  109 taaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaattcaattatttccagtaaataagac 208  Q
    ||||||||||||| ||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||     
T  54605 taaatacattgaataaattatgtatccaatttagattttataccatatacttaaattattcaatgtatctgaaaagtcaattatttcctgtaaataggat 54704  T
Q  209 cgtaggaagtattttttaagtttcttttacggaaaaaatttagtacgtgaattatgttagttttcaatgtttgaatcttcagaattctctctgatggccc 308  Q
    || ||||||||||||||||||||||||||| ||||||||||||         |||| ||||||| |||||||||||||| |||||||||||||||| |||    
T  54705 cggaggaagtattttttaagtttcttttacagaaaaaatttag---------tatggtagtttttaatgtttgaatctttagaattctctctgatgtccc 54795  T
Q  309 ttaactcaccgcaatcgatttgtttgcttaaaactattactccatccatcccaaattaagtgagttatttg 379  Q
    |||||||||  ||| || |||||||| || ||||||||||||| ||  ||| |||||||||||| ||||||    
T  54796 ttaactcac--caaacgctttgtttgttttaaactattactccctcggtcctaaattaagtgagctatttg 54864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 9 - 379
Target Start/End: Complemental strand, 14785225 - 14784866
Alignment:
Q  9 ctcagatcagtaatgttcaacagcttgagattgttacaggtttgtatataatcttcttttgaatccctacaattctttttacaagaaacaatttagtttt 108  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  14785225 ctcagatcagtaatgttcagcagcttgagattgttacaggtttgtatataatcttcttttgaatccctacgattctttttacaagaaacaatttattttt 14785126  T
Q  109 taaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaattcaattatttccagtaaataagac 208  Q
    ||||||||||||| ||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||     
T  14785125 taaatacattgaataaattatgtatccaatttagattttataccatatacttaaattattcaatgtatctgaaaagtcaattatttcctgtaaataggat 14785026  T
Q  209 cgtaggaagtattttttaagtttcttttacggaaaaaatttagtacgtgaattatgttagttttcaatgtttgaatcttcagaattctctctgatggccc 308  Q
    || ||||||||||||||||||||||||||| ||||||||||||         |||| ||||||| |||||||||||||| |||||||||||||||| |||    
T  14785025 cggaggaagtattttttaagtttcttttacagaaaaaatttag---------tatggtagtttttaatgtttgaatctttagaattctctctgatgtccc 14784935  T
Q  309 ttaactcaccgcaatcgatttgtttgcttaaaactattactccatccatcccaaattaagtgagttatttg 379  Q
    |||||||||  ||| || |||||||| || ||||||||||||| ||  ||| |||||||||||| ||||||    
T  14784934 ttaactcac--caaacgctttgtttgttttaaactattactccctcggtcctaaattaagtgagctatttg 14784866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 4698636 - 4698743
Alignment:
Q  83 ctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaa 182  Q
    ||||||||||||||||||| | |||||| |||||||||| || ||||||||||| | |||||| || |||| |||| ||||||||||||||||||| |||    
T  4698636 ctttttacaagaaacaattgaatttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaatgtatctaaaa 4698735  T
Q  183 attcaatt 190  Q
    | ||||||    
T  4698736 aatcaatt 4698743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 31240979 - 31240889
Alignment:
Q  81 ttctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaa 171  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||||||||| |  | ||||||||| ||||||||| ||||||||||||    
T  31240979 ttctttttacaagaaacaattaactttttaaatacattgaataaattatgtatttagtttagattttaaaccagatacataaattattcaa 31240889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 4698755 - 4698646
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||| |||||||| | |||||| |||||||||| || |||||||| || | |||| | || ||||||||| ||||||||||||||||||| ||||||    
T  4698755 tttacaataaacaattgattttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaaaaatt 4698656  T
Q  186 caattatttc 195  Q
    ||||| ||||    
T  4698655 caattgtttc 4698646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 55292244 - 55292108
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| |||| ||| || |  || |||||  || |||||||||||||||| |||| |    
T  55292244 tttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttaggttctcgactagatatatacattattcaatgtatctaaaaagt 55292145  T
Q  186 caattatttccagtaaataagaccgtaggaagtattt 222  Q
    ||| | | ||  ||||||| ||||| |||||||||||    
T  55292144 caaatttctcttgtaaataggaccggaggaagtattt 55292108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 19485588 - 19485722
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||||||||||| || || |||||||| || | ||| || |  |  |||||| || |||||||||||||||| |||| |    
T  19485588 tttacaagaaacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatctaaaaaat 19485687  T
Q  186 caattatttccagtaaataagaccgtaggaagtat 220  Q
    ||||| | ||  ||||||| ||||| ||| |||||    
T  19485688 caattttctcttgtaaataggaccggagggagtat 19485722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 38688043 - 38687910
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  38688043 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacgtacattattcaatgtatctaaaaagt 38687944  T
Q  186 caattatttccagtaaataagaccgtaggaagta 219  Q
    ||| | | ||  ||||||||||||| ||| ||||    
T  38687943 caactttctcttgtaaataagaccggagggagta 38687910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 4758909 - 4758774
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| |||| ||| || |  || |||||| || |||||||||||||||| |||| |    
T  4758909 tttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttaactagatacatacattattcaatgtatctaaaaagt 4758810  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||| | | ||  ||||||| ||||| ||| ||||||    
T  4758809 caactgtctcttgtaaataggaccggagggagtatt 4758774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 18135445 - 18135355
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtat 176  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| |||| ||| || |  || |||||| || ||||||||||||||    
T  18135445 tttacaagagacaatttactttttagatacattgaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtat 18135355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 31854511 - 31854409
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  31854511 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtatctaaaaagt 31854412  T
Q  186 caa 188  Q
    |||    
T  31854411 caa 31854409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 52536083 - 52535986
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaa 183  Q
    ||||||||| |||||| | |||||| ||||||| || || |||||||| |||| ||| ||||  || |||||| || |||||||||||||||| ||||    
T  52536083 tttacaagatacaattaactttttatatacattaaataatttatgtatttgatttaggtttttaactagatacatacattattcaatgtatctaaaaa 52535986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 36099503 - 36099638
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  36099503 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaaat 36099602  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||| | | ||  ||||||| ||||| ||| ||||||    
T  36099603 caactgtctcttgtaaataggaccggagggagtatt 36099638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 2385327 - 2385225
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| |  | |||||| |  || |||||| || |||||||||||||||| |||| |    
T  2385327 tttacaagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatctaaaaagt 2385228  T
Q  186 caa 188  Q
    |||    
T  2385227 caa 2385225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 2411972 - 2411882
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtat 176  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| |  | |||||| |  || |||||| || ||||||||||||||    
T  2411972 tttacaagaaacaatttactttttagatacattaaataatttatgtatttagtttagattcttgactagatacatacattattcaatgtat 2411882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 18430387 - 18430297
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtat 176  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| |||| ||| || |  || |||||| || ||||||||||||||    
T  18430387 tttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtat 18430297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 31227287 - 31227389
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||| ||||||||| |||| |    
T  31227287 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatctaaaaagt 31227386  T
Q  186 caa 188  Q
    |||    
T  31227387 caa 31227389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 56216244 - 56216352
Alignment:
Q  80 attctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctg 179  Q
    ||||| ||||||||| |||||||| |||||| ||||||| || || |||||||| || | | |||| |  || | |||| || ||||||||||||||||     
T  56216244 attctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttggattcttaactaaatacatacattattcaatgtatcta 56216343  T
Q  180 aaaattcaa 188  Q
    |||| ||||    
T  56216344 aaaagtcaa 56216352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 26563934 - 26564055
Alignment:
Q  83 ctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaa 182  Q
    ||||||||||||| ||||| | |||||| ||| |||||| ||||||||||| || | |||||| || ||||||||| |||||||||||||||||||||||    
T  26563934 ctttttacaagaagcaattaactttttagatatattgaataaattatgtatttggtttagattctagaccagatacgtaaattattcaatgtatctgaaa 26564033  T
Q  183 attcaattatttccagtaaata 204  Q
    | |||||| ||||  |||||||    
T  26564034 agtcaattgtttcttgtaaata 26564055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 7107646 - 7107782
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||| | |||||| ||||||| || || |||||||| || | ||||||||  || |||||| ||||||||||||||||||| |||| |    
T  7107646 tttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagatttttgactagatacataaattattcaatgtatctaaaaagt 7107745  T
Q  186 caattatttccagtaaataagaccgtaggaagtattt 222  Q
    ||| | | ||  ||||||| ||||| ||| |||||||    
T  7107746 caactttctcttgtaaataggaccggaggtagtattt 7107782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 12763245 - 12763380
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  12763245 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 12763344  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||||| | ||  ||||||||||||| ||| ||||||    
T  12763345 caattttctcttgtaaataagaccggagggagtatt 12763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 7463465 - 7463562
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaa 183  Q
    |||||||||||||||||| ||||||||||||||  | || |||||||| || | |||||| |  |  |||||| || |||||||||||||||| ||||    
T  7463465 tttacaagaaacaatttactttttaaatacattacataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatctaaaaa 7463562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 41850728 - 41850592
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||| |||||||| |||| |||||  || ||||| | |||| |||||| || | || ||||||||||| |||| | |||||||||||| |||| |||| |    
T  41850728 tttataagaaacattttacttttttgattcattgcataaatgatgtatttgctctatattttataccaaatacattaattattcaatgaatctaaaaaat 41850629  T
Q  186 caattatttccagtaaataagaccgtaggaagtattt 222  Q
     || | ||||   |||||||||||||||| |||||||    
T  41850628 taactttttcttataaataagaccgtagggagtattt 41850592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 46449916 - 46449808
Alignment:
Q  80 attctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctg 179  Q
    ||||| ||||||||| |||||| | |||||||||||||| || || |||| ||| || | ||||||||  |  | |||| |||||||||||||||||||     
T  46449916 attctatttacaagagacaattaattttttaaatacattaaataatttatatatttggtttagatttttaattaaatacataaattattcaatgtatcta 46449817  T
Q  180 aaaattcaa 188  Q
    |||| ||||    
T  46449816 aaaagtcaa 46449808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 26564053 - 26563956
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaa 183  Q
    |||||||||||||||| | |||| | |||||||||| || ||| ||||||| | |||| | || |||| |||| ||| ||||||||| ||||| ||||    
T  26564053 tttacaagaaacaattgacttttcagatacattgaataatttacgtatctggtctagaatctaaaccaaatacataatttattcaatatatctaaaaa 26563956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 30866261 - 30866398
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||| |||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||| ||||||||| |||| |    
T  30866261 tttaaaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatctaaaaaat 30866360  T
Q  186 caattatttccagtaaataagaccgtaggaagtatttt 223  Q
    ||| | | ||  ||||||||||||| ||| ||||||||    
T  30866361 caactttctcttgtaaataagaccggagggagtatttt 30866398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 8243814 - 8243679
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | |||||| |  || |||||| || |||||||||||||||| |||| |    
T  8243814 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagt 8243715  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||||| | ||  ||||||||||||| | ||||||||    
T  8243714 caattgtctcttgtaaataagaccggatgaagtatt 8243679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 10049684 - 10049818
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  10049684 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 10049783  T
Q  186 caattatttccagtaaataagaccgtaggaagtat 220  Q
    ||||| | ||  ||||||| ||||| ||| |||||    
T  10049784 caattgtctcttgtaaataggaccggagggagtat 10049818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 225
Target Start/End: Original strand, 23825151 - 23825304
Alignment:
Q  72 tccctacaattctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaa 171  Q
    ||||| |||| || |||||||||||||||||| |||||| ||||||  || || |||||||| || | |||||| |  || |||||| || |||||||||    
T  23825151 tccctccaatcctatttacaagaaacaatttactttttagatacatcaaataatttatgtatttggtttagattcttgactagatacatacattattcaa 23825250  T
Q  172 tgtatctgaaaattcaattatttccagtaaataagaccgtaggaagtatttttt 225  Q
    ||||||| |||| |||| | | ||  ||||||| || || ||| ||||||||||    
T  23825251 tgtatctaaaaagtcaactttctcttgtaaatatgatcggagggagtatttttt 23825304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 22003812 - 22003916
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||| | |||||| |||||||||| || |||| ||| |  | |||||| | ||| |||||| ||||||||||||||||||| |||| |    
T  22003812 tttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaatgtatctaaaaagt 22003911  T
Q  186 caatt 190  Q
    |||||    
T  22003912 caatt 22003916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 22011329 - 22011433
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||| | |||||| |||||||||| || |||| ||| |  | |||||| | ||| |||||| ||||||||||||||||||| |||| |    
T  22011329 tttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaatgtatctaaaaagt 22011428  T
Q  186 caatt 190  Q
    |||||    
T  22011429 caatt 22011433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 6087033 - 6086931
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  6087033 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 6086934  T
Q  186 caa 188  Q
    |||    
T  6086933 caa 6086931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 25846643 - 25846541
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||||||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  25846643 tttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaaat 25846544  T
Q  186 caa 188  Q
    |||    
T  25846543 caa 25846541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 52114156 - 52114054
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || | ||| |||||| || |||||||||||||||| |||| |    
T  52114156 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttctttactagatacatacattattcaatgtatctaaaaaat 52114057  T
Q  186 caa 188  Q
    |||    
T  52114056 caa 52114054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 8243698 - 8243833
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||| | |||||| |||||||||| ||  |||||||||  |  ||| | || |||| |||| ||||||||||||||||||| |||| |    
T  8243698 tttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattattcaatgtatctaaaaagt 8243797  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
     |||| | ||  ||||||| ||||| ||| ||||||    
T  8243798 aaattgtctcttgtaaataggaccggaggtagtatt 8243833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 9465203 - 9465064
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||  || || |||||||| |||| ||| || |  || |||||| || |||||||||||||||| |||| |    
T  9465203 tttacaagagacaatttactttttagatacataaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagt 9465104  T
Q  186 caattatttccagtaaataagaccgtaggaagtatttttt 225  Q
    ||| | | ||  ||||||| ||||| ||  ||||||||||    
T  9465103 caactttatcttgtaaataggaccggagagagtatttttt 9465064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 26999037 - 26999172
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  26999037 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 26999136  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||| | | ||  ||||||| ||||| ||| ||||||    
T  26999137 caaatgtctcttgtaaataggaccggagggagtatt 26999172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 55139187 - 55139286
Alignment:
Q  84 tttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaa 183  Q
    ||||||| |||||||||| | |||||| |||||||||| || |||||||| || | || ||| |  |||| |||| ||||||||||||| ||||| ||||    
T  55139187 tttttaccagaaacaattgactttttagatacattgaataatttatgtatttgttttaaattcttgaccaaatacataaattattcaatatatctaaaaa 55139286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 335507 - 335405
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||| |||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  335507 tttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 335408  T
Q  186 caa 188  Q
    |||    
T  335407 caa 335405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 14768114 - 14768216
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  14768114 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaat 14768213  T
Q  186 caa 188  Q
    |||    
T  14768214 caa 14768216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 18765390 - 18765256
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| || |||| || || |||||||| || | ||| || |  || | |||| || |||||||||||||||| |||| |    
T  18765390 tttacaagaaacaatttactttttagatgcattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaat 18765291  T
Q  186 caattatttccagtaaataagaccgtaggaagtat 220  Q
    ||| | | ||  ||||||| ||||| |||||||||    
T  18765290 caactttctcttgtaaatatgaccggaggaagtat 18765256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 227
Target Start/End: Original strand, 9440144 - 9440285
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| ||| || | |||||| |||||||||| ||  |||||||||  |  |||  ||| |||| |||| ||||||||||||||||||| |||| |    
T  9440144 tttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgtatctaaaaagt 9440243  T
Q  186 caattatttccagtaaataagaccgtaggaagtattttttaa 227  Q
     |||| | ||  ||||||| ||||| ||| |||| |||||||    
T  9440244 aaattgtctcttgtaaataggaccggaggtagtaatttttaa 9440285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 44593217 - 44593322
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||||| | || | ||||||||||||||||| ||  ||||||||| ||  | |  ||| |||| |||| ||||||||| ||||||||| ||||||    
T  44593217 tttacaagaaaaagttgactttttaaatacattgaataatatatgtatctaatcaaaaacttaaaccaaatacataaattatttaatgtatctaaaaatt 44593316  T
Q  186 caatta 191  Q
     |||||    
T  44593317 aaatta 44593322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 55139305 - 55139196
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||| ||||||||||  | |||||| ||| |||||| || |||||||| || |  ||| |||| | || |||| ||||||||||||||||||| |||| |    
T  55139305 tttaaaagaaacaatcaactttttagatatattgaataatttatgtatttggtcaagaatttaaaacaaatacataaattattcaatgtatctaaaaagt 55139206  T
Q  186 caattatttc 195  Q
    ||||| ||||    
T  55139205 caattgtttc 55139196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 28565067 - 28564963
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| || |||| || || |||||||| || | |||||| |  || |||||| || |||||||||||||| | |||| |    
T  28565067 tttacaagagacaatttattttttagatgcattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatataaaaagt 28564968  T
Q  186 caatt 190  Q
    |||||    
T  28564967 caatt 28564963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 29019751 - 29019855
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| ||||||||  ||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  29019751 tttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaagt 29019850  T
Q  186 caatt 190  Q
    |||||    
T  29019851 caatt 29019855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 24255984 - 24255895
Alignment:
Q  105 tttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaattcaattattt 194  Q
    |||||||||| |||||| ||| ||||||| || | |||||| || ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  24255984 tttttaaataaattgaataaagtatgtatttggtttagattctagaccagatacgtaaattattcaatgtatatgaaaaatcaattattt 24255895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 2229202 - 2229062
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||| ||||||| |||| |    
T  2229202 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcattgtatctaaaaagt 2229103  T
Q  186 caattatttccagtaaataagaccgtaggaagtatttttta 226  Q
    ||| | | ||  ||||||| ||||| ||| |||||||||||    
T  2229102 caactgtctcttgtaaataggaccggagggagtatttttta 2229062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 41915610 - 41915744
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||| |||| |||||||| |||||| ||||||| || || |||||||| || | |||||| |  || |||||| || |||||||||||||||| |||| |    
T  41915610 tttataagagacaatttaatttttagatacattaaataatttatgtatttggtttagattattgactagatacatacattattcaatgtatctaaaaagt 41915709  T
Q  186 caattatttccagtaaataagaccgtaggaagtat 220  Q
    ||||| | ||  ||||||| ||||| ||| |||||    
T  41915710 caattttctcttgtaaataggaccggagggagtat 41915744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 8242240 - 8242341
Alignment:
Q  87 ttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaattc 186  Q
    |||||||| |||||||| |||||||||||||| ||  | |||||||| |||| ||| || |  || |||||| || |||||||||||||||| |||| ||    
T  8242240 ttacaagagacaatttactttttaaatacattaaatgatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaaatc 8242339  T
Q  187 aa 188  Q
    ||    
T  8242340 aa 8242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 43135070 - 43135195
Alignment:
Q  96 acaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaattcaattatttc 195  Q
    |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |||| | | ||    
T  43135070 acaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctc 43135169  T
Q  196 cagtaaataagaccgtaggaagtatt 221  Q
      ||||||| ||||| ||||||||||    
T  43135170 ttgtaaataggaccggaggaagtatt 43135195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 22781898 - 22781989
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatc 177  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||    
T  22781898 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 22781989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 2339306 - 2339408
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  2339306 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 2339405  T
Q  186 caa 188  Q
    |||    
T  2339406 caa 2339408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 210
Target Start/End: Original strand, 33642474 - 33642598
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| | |||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  33642474 tttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaat 33642573  T
Q  186 caattatttccagtaaataagaccg 210  Q
    ||| | | ||  |||||||||||||    
T  33642574 caactttctcttgtaaataagaccg 33642598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 34028399 - 34028491
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatct 178  Q
    |||||||| ||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || ||||||||||||||||    
T  34028399 tttacaagtaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatct 34028491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 22857822 - 22857918
Alignment:
Q  88 tacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaat 184  Q
    |||||||||||||| | |||||| |||||||||| || ||||||||||||| |||| | || |||| |||| ||||||||||| ||||||| |||||    
T  22857822 tacaagaaacaattgactttttagatacattgaataatttatgtatctgatctagaatctaaaccaaatacataaattattcattgtatctaaaaat 22857918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 44737414 - 44737280
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | |||||| |  || |||||| || |||||||||||||||| |||| |    
T  44737414 tttacaagagacaatttactttttagatacattgaataatttatgtatttggt-tagattcttaactagatacatacattattcaatgtatctaaaaagt 44737316  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||||| | ||  ||||||||||||| ||| ||||||    
T  44737315 caattttctcttgtaaataagaccggagggagtatt 44737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 45065726 - 45065610
Alignment:
Q  72 tccctacaattctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaa 171  Q
    ||||| || |||| ||||||||| |||||||| |||||| ||||||| || || |||||||| | || |||||| || || |||||| || |||||||||    
T  45065726 tccctccagttctatttacaagagacaatttactttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaa 45065627  T
Q  172 tgtatctgaaaattcaa 188  Q
    ||||||| |||| ||||    
T  45065626 tgtatctaaaaagtcaa 45065610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 7765926 - 7765789
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||| |||| |||||||| |||||| ||||||| || ||||||||||| |||| ||| || |  || |||||| || |||||||||||||||| |||| |    
T  7765926 tttataagagacaatttactttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagt 7765827  T
Q  186 caattatttccagtaaataagaccgtaggaagtatttt 223  Q
    ||| | | ||  ||||||| ||||| ||| ||||||||    
T  7765826 caactttctcttgtaaataggaccggagggagtatttt 7765789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 22857938 - 22857827
Alignment:
Q  83 ctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaa 182  Q
    ||||| ||| |||||| |||| |||||| ||||| |||| || |||||||| || | |||||| || | ||||||| ||||||||||||||||||| |||    
T  22857938 cttttcacaggaaacacttta-tttttagatacaatgaataatttatgtatttggtttagattctagatcagatacataaattattcaatgtatctaaaa 22857840  T
Q  183 attcaattatttc 195  Q
    | |||||| ||||    
T  22857839 agtcaattgtttc 22857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 16241399 - 16241297
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  16241399 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 16241300  T
Q  186 caa 188  Q
    |||    
T  16241299 caa 16241297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 27182143 - 27182086
Alignment:
Q  150 accagatacttaaattattcaatgtatctgaaaattcaattatttccagtaaataaga 207  Q
    |||| |||| |||||||||||||||||||||||| |||||| ||||  ||||||||||    
T  27182143 accaaatacataaattattcaatgtatctgaaaaatcaattgtttcttgtaaataaga 27182086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 27831685 - 27831628
Alignment:
Q  150 accagatacttaaattattcaatgtatctgaaaattcaattatttccagtaaataaga 207  Q
    |||| |||| |||||||||||||||||||||||| |||||| ||||  ||||||||||    
T  27831685 accaaatacataaattattcaatgtatctgaaaaatcaattgtttcttgtaaataaga 27831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 20427017 - 20427121
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||| ||| || || |||||||| |||| ||| || |  || |||||| || |||||||||||||||| |||| |    
T  20427017 tttacaagagacaatttactttttagatagattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagt 20427116  T
Q  186 caatt 190  Q
    |||||    
T  20427117 caatt 20427121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 42263602 - 42263500
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || | |||| || |||||||||||||||| |||| |    
T  42263602 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaat 42263503  T
Q  186 caa 188  Q
    |||    
T  42263502 caa 42263500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 42341644 - 42341770
Alignment:
Q  96 acaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaattcaattatttc 195  Q
    |||||||| |||||||||||||| || || |||||||| || | |||||| |  |  |||||| || |||||||||||||| | |||| |||||| | ||    
T  42341644 acaatttactttttaaatacattaaataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatttaaaaaatcaattttctc 42341743  T
Q  196 cagtaaataagaccgtaggaagtattt 222  Q
      ||||||| ||||| | |||||||||    
T  42341744 ttgtaaataggaccggatgaagtattt 42341770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 43658057 - 43657955
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| | |||||| |||||| ||||||| || || |||||||| || | ||| ||||  || |||||| || |||||||||||||||| |||| |    
T  43658057 tttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggtttttgactagatacatacattattcaatgtatctaaaaagt 43657958  T
Q  186 caa 188  Q
    |||    
T  43657957 caa 43657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 38598472 - 38598569
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaa 183  Q
    ||||||||| |||||||| |||||| ||| ||| || || |||||||| || | ||| || |  ||||||||| || |||||||||||||||| ||||    
T  38598472 tttacaagagacaatttactttttatatatattaaataatttatgtatttggtttaggttcttgaccagatacatatattattcaatgtatctaaaaa 38598569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 11711456 - 11711352
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||| | ||||||| || || |||||||| |||  ||| || |  || |||||| || |||||||||||||||| |||| |    
T  11711456 tttacaagagacaatttacttttaagatacattaaataatttatgtatttgacttaggttcttgactagatacatacattattcaatgtatctaaaaagt 11711357  T
Q  186 caatt 190  Q
    |||||    
T  11711356 caatt 11711352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 210
Target Start/End: Original strand, 33325349 - 33325473
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || ||||||||||| | ||||||||  || |||||| || |||||||||||||||| |||| |    
T  33325349 tttacaagagacaatttattttttagatacattaaataatttatgtatctggtttagatttttgactagatacatacattattcaatgtatctaaaaagt 33325448  T
Q  186 caattatttccagtaaataagaccg 210  Q
    ||| | ||||  ||||||| |||||    
T  33325449 caactttttcttgtaaataggaccg 33325473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 10065387 - 10065253
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||| |||||||||| |||||| ||||||| || || |||||||| |||| ||| || |  || |||||| || |||||||||||||||| |||| |    
T  10065387 tttacaaaaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgacgagatacatacattattcaatgtatctaaaaaat 10065288  T
Q  186 caattatttccagtaaataagaccgtaggaagtat 220  Q
    ||||| | ||  ||||||| ||||| ||| |||||    
T  10065287 caattttctcttgtaaataggaccggagggagtat 10065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 28989288 - 28989421
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | |||||| |  || |||||| || |||||||||||||||| | || |    
T  28989288 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttagattcttgactagatacgtacattattcaatgtatctaataagt 28989387  T
Q  186 caattatttccagtaaataagaccgtaggaagta 219  Q
    ||| | | ||  ||||||||||||| ||| ||||    
T  28989388 caactttctcttgtaaataagaccggagggagta 28989421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 14281606 - 14281708
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  14281606 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 14281705  T
Q  186 caa 188  Q
    |||    
T  14281706 caa 14281708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 23398096 - 23398200
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||| ||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  23398096 tttacaagagacaacttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 23398195  T
Q  186 caatt 190  Q
    |||||    
T  23398196 caatt 23398200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 9548688 - 9548822
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| |||| ||| || |  |  ||||||  | ||| |||||||||||| |||| |    
T  9548688 tttacaagaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgattagatacacacattcttcaatgtatctaaaaagt 9548787  T
Q  186 caattatttccagtaaataagaccgtaggaagtat 220  Q
    ||||| | ||  ||||||| ||||| ||| |||||    
T  9548788 caattttctcttgtaaataggaccggagggagtat 9548822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 29312455 - 29312545
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtat 176  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| |||| ||| || |  || |||||| || ||||||||||||||    
T  29312455 tttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacgtacattattcaatgtat 29312545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 38830499 - 38830589
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtat 176  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || ||||||||||||||    
T  38830499 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtat 38830589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 40161305 - 40161201
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| ||||  ||  ||||| || |||||||||||||| | |||| |    
T  40161305 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaatgtatttaaaaagt 40161206  T
Q  186 caatt 190  Q
    |||||    
T  40161205 caatt 40161201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 7405460 - 7405595
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  7405460 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 7405559  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||||| | ||  ||||||||||||| ||| ||||||    
T  7405560 caattttctcttgtaaataagaccggagggagtatt 7405595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 178
Target Start/End: Complemental strand, 6045813 - 6045721
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatct 178  Q
    ||||||||| |||||||| |||||| ||| ||| || || |||||||| |||| |||||| |  || |||||| || ||||||||||||||||    
T  6045813 tttacaagagacaatttactttttagatagattaaataatttatgtatttgatttagattcttgactagatacatagattattcaatgtatct 6045721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 31971162 - 31971027
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| ||||||||  ||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  31971162 tttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 31971063  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||| | | ||  ||||||||||||| ||| ||||||    
T  31971062 caactttctcttgtaaataagaccggagggagtatt 31971027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 390937 - 390835
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  390937 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaaat 390838  T
Q  186 caa 188  Q
    |||    
T  390837 caa 390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 6047928 - 6047831
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaa 183  Q
    ||||||||| | |||||| |||||| ||||||| || || |||||||| |||| ||| || |  || |||||| || |||||||||||||||| ||||    
T  6047928 tttacaagagataatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaa 6047831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 6801683 - 6801586
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaa 183  Q
    |||||||||||||||||| |||||| ||||||| || || | |||||| || | ||| || |  || |||||| || |||||||||||||||| ||||    
T  6801683 tttacaagaaacaatttactttttagatacattaaataattcatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaa 6801586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 30686560 - 30686664
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| |  | ||| ||||  || |||||| || |||||||||||||| | |||| |    
T  30686560 tttacaagagacaatttactttttagatacattaaataatttatgtatttcgtttaggtttttgactagatacatacattattcaatgtatttaaaaagt 30686659  T
Q  186 caatt 190  Q
    |||||    
T  30686660 caatt 30686664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 29374186 - 29374325
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  29374186 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgacgagatacatacattattcaatgtatctaaaaagt 29374285  T
Q  186 caattatttccagtaaataagaccgtaggaagtatttttt 225  Q
    ||| | | ||  ||||||| ||||| ||| ||||||||||    
T  29374286 caactgtctcttgtaaataggaccggagggagtatttttt 29374325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 38393892 - 38393797
Alignment:
Q  81 ttctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtat 176  Q
    |||| |||||||||||||||| | |||||||||| |||||| || ||||| || |||| |||||| |  || | |||| |||||||||||||||||    
T  38393892 ttctatttacaagaaacaattgactttttaaatatattgaataatttatgaatttgatttagattcttgactatatacataaattattcaatgtat 38393797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 6910728 - 6910830
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| |||| |||||| |  || |||| | || |||||||||| ||||| |||| |    
T  6910728 tttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttagattcttgactagatgcatacattattcaatatatctaaaaagt 6910827  T
Q  186 caa 188  Q
    |||    
T  6910828 caa 6910830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 7749934 - 7750036
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | |||||| |  || |||||| || |||||||||||||||| |||| |    
T  7749934 tttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagt 7750033  T
Q  186 caa 188  Q
    |||    
T  7750034 caa 7750036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 9601725 - 9601623
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||  || || |||||||| || | ||||||||  || |||||| || |||||||||||||||| |||| |    
T  9601725 tttacaagagacaatttactttttagatacatcaaataatttatgtatttggtttagatttttgactagatacatacattattcaatgtatctaaaaagt 9601626  T
Q  186 caa 188  Q
    |||    
T  9601625 caa 9601623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 37699912 - 37699810
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  37699912 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 37699813  T
Q  186 caa 188  Q
    |||    
T  37699812 caa 37699810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 7945853 - 7945950
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaa 183  Q
    |||||||||||||||||| |||||| ||||||| || || |||| ||| || | |||||| |  || |||||| || |||||||||||||||| ||||    
T  7945853 tttacaagaaacaatttactttttagatacattaaataatttatatatttggtttagattcttgactagatacatacattattcaatgtatctaaaaa 7945950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 25027710 - 25027846
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| |||||||||| || |||||||| || | ||| || |  || |||||  || |||||||||||||||| |||| |    
T  25027710 tttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaagt 25027809  T
Q  186 caattatttccagtaaataagaccgtaggaagtattt 222  Q
    ||| | | ||  ||||||| ||||| ||| |||||||    
T  25027810 caactgtctcttgtaaataggaccggagggagtattt 25027846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 13144896 - 13145031
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  13144896 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaaat 13144995  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||| | | ||  ||||||| ||||| ||| ||||||    
T  13144996 caactgtctcttgtaaataggaccggagggagtatt 13145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 23411181 - 23411316
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||| |||| |||| ||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  23411181 tttataagatacaaattactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaat 23411280  T
Q  186 caattatttccagtaaataagaccgtaggaagtatt 221  Q
    ||||| | ||  ||||||||||||| ||| ||||||    
T  23411281 caattttctcttgtaaataagaccggagggagtatt 23411316  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 31803090 - 31802988
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||  || |||||||||||||||| |||| |    
T  31803090 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatatatacattattcaatgtatctaaaaagt 31802991  T
Q  186 caa 188  Q
    |||    
T  31802990 caa 31802988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 41989580 - 41989682
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  41989580 tttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 41989679  T
Q  186 caa 188  Q
    |||    
T  41989680 caa 41989682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 2959371 - 2959267
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || ||  ||||||| |||| || ||| |  || |||||  || ||| |||||||||||| |||| |    
T  2959371 tttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattcttcaatgtatctaaaaagt 2959272  T
Q  186 caatt 190  Q
    |||||    
T  2959271 caatt 2959267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 2967840 - 2967736
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || ||  ||||||| |||| || ||| |  || |||||  || ||| |||||||||||| |||| |    
T  2967840 tttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattcttcaatgtatctaaaaagt 2967741  T
Q  186 caatt 190  Q
    |||||    
T  2967740 caatt 2967736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 14338952 - 14338824
Alignment:
Q  81 ttctttttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctga 180  Q
    |||||||||||||| | | || | |||||| |||||||||| || ||||||||||  |  ||| |||| |||| |||| ||||||||| ||| ||||| |    
T  14338952 ttctttttacaagagaaatttaactttttagatacattgaataatttatgtatctattcaagaatttaaaccaaatacataaattatttaatttatctaa 14338853  T
Q  181 aaattcaattatttccagtaaataagacc 209  Q
    ||| | |||| | ||  ||||||||||||    
T  14338852 aaaattaattgtctcttgtaaataagacc 14338824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 26898207 - 26898343
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||||||||||| || || |||||||| || | ||| || |  || | |||| || ||||||||||| |||| |||| |    
T  26898207 tttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgcatctaaaaagt 26898306  T
Q  186 caattatttccagtaaataagaccgtaggaagtattt 222  Q
    ||| | | ||  ||||||| ||||| ||| |||||||    
T  26898307 caactttctcttgtaaataggaccggagggagtattt 26898343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 210
Target Start/End: Complemental strand, 42311942 - 42311818
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    ||||||||| |||||||| |||||| ||||||| || || |||||||| || | ||  ||||  || | |||| || |||||||||||||| | |||| |    
T  42311942 tttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaagtttttgactaaatacatacattattcaatgtatttaaaaagt 42311843  T
Q  186 caattatttccagtaaataagaccg 210  Q
    ||||| ||||  ||||||| |||||    
T  42311842 caattttttcttgtaaataggaccg 42311818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 29260 - 29362
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || |||||| || |||||||||||||||| |||| |    
T  29260 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 29359  T
Q  186 caa 188  Q
    |||    
T  29360 caa 29362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 492437 - 492335
Alignment:
Q  86 tttacaagaaacaatttagtttttaaatacattgaacaaattatgtatctgatatagattttataccagatacttaaattattcaatgtatctgaaaatt 185  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||| || | ||| || |  || | |||| || |||||||||||||||| |||| |    
T  492437 tttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaat 492338  T
Q  186 caa 188  Q
    |||    
T  492337 caa 492335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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