View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5851_low_3 (Length: 316)
Name: NF5851_low_3
Description: NF5851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5851_low_3 |
 | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold0151 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 3 - 309
Target Start/End: Original strand, 32899707 - 32900013
Alignment:
| Q |
3 |
gctaaaaatcgggctgttacagatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttc |
102 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32899707 |
gctaaaaatcgggttgttacagatgtggggaaggttgttggtctacacaaagctttggattgactttctaatcaacagtttgataatgtagattttgttc |
32899806 |
T |
|
| Q |
103 |
ttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatag |
202 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32899807 |
ttgattgtaaaaggattgttgattgcgtcaactctagtttagatgatagtagcaagtttggatgtattatcactgcttgtaaacagttgctagtagatag |
32899906 |
T |
|
| Q |
203 |
atttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttatt |
302 |
Q |
| |
|
|||| ||||||||||||||| ||||| |||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||| |
|
|
| T |
32899907 |
atttcagaactctcatgttgagttcaccaggagacaatcaaatagggtagttcacgagttagctcatgcagccctgtctaatcatagcccccacattatt |
32900006 |
T |
|
| Q |
303 |
gatgatg |
309 |
Q |
| |
|
||||||| |
|
|
| T |
32900007 |
gatgatg |
32900013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 49 - 310
Target Start/End: Complemental strand, 13104631 - 13104369
Alignment:
| Q |
49 |
acacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatga |
148 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||| ||| | ||||||||| |||||||||||||| || ||| ||| | ||| ||||| |||||||| |
|
|
| T |
13104631 |
acacagctttggattgactctctaatcaacagtttgacaatctcgattttgttattgattgtaaaaggattcttggttgtgacaattctagcttagatga |
13104532 |
T |
|
| Q |
149 |
tagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggc-aagcaaatag |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || ||||| |||||| ||| |
|
|
| T |
13104531 |
tagtagcgagtttggatgtattatcactgcttgtaaacagctggtagtagatagatttcagaactctcatgttgagttcaacaagaggcaaagcaagtag |
13104432 |
T |
|
| Q |
248 |
ggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||| |
|
|
| T |
13104431 |
ggtagctcacgagttagctcagacagccctgtctaatcttagcccccatattattgacgatgt |
13104369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 83 - 310
Target Start/End: Original strand, 11657519 - 11657745
Alignment:
| Q |
83 |
tgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgt |
182 |
Q |
| |
|
|||||||||||||||| |||| |||||||||| ||||| |||||| ||||| |||||| |||| ||||||| | ||||||||||||||||||||||||| |
|
|
| T |
11657519 |
tgataatgtagattttattctcgattgtaaaaaggttggtgattgtgtcaattctagtctagaagatagtatcaagtttggatgtattatcactgcttg- |
11657617 |
T |
|
| Q |
183 |
aaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtcta |
282 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||| |
|
|
| T |
11657618 |
aaacagctgctagttgatagatttcagaactctcatgttgagttcagccggaggcaagcaaatagggtagctcacgagttagcttaggtagccctatcta |
11657717 |
T |
|
| Q |
283 |
atcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
|||||||||| || || ||||||||||| |
|
|
| T |
11657718 |
atcctagccctcatgtgattgatgatgt |
11657745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 295
Target Start/End: Complemental strand, 27862331 - 27862106
Alignment:
| Q |
51 |
acagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgata |
150 |
Q |
| |
|
||||| || |||||| | ||||||||||| ||||||||| | ||||||| ||||||||| |||| ||||||||||| ||||| ||||||| | |
|
|
| T |
27862331 |
acagccttagattggatctctaatcaacaatttgataatatcaattttgtacttgattgtcaaagagttgttgattgtgtcaattctagtt--------a |
27862240 |
T |
|
| Q |
151 |
gtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggt |
250 |
Q |
| |
|
| ||||| ||| | |||||||| |||||||||||| | ||||||| ||||||||| ||||||||||||||| ||||| |||||||||| ||||||||| |
|
|
| T |
27862239 |
gcagcgaatttaggtgtattattactgcttgtaaatagctgctagaggatagatttcagaactctcatgttgagttcaacaggaggcaaataaatagggt |
27862140 |
T |
|
| Q |
251 |
agctcacgagttagctcaggcagccctgtctaatcctagccccca |
295 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |
|
|
| T |
27862139 |
agctca-----------aggcagccctgtctaatcctagccccca |
27862106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 23 - 310
Target Start/End: Original strand, 27877525 - 27877812
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| | | |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27877525 |
agatgtgggggaggctgttggtctacacacatctttggattggctttctaatcaaaggtttgataatgtagattttgttcttgattgtaaaagggttgtt |
27877624 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| |
|
|
| T |
27877625 |
gattgcatcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacagctgctagtagatagatttcataactctcatgttg |
27877724 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27877725 |
agttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcaaccctgtctaatcctagccgccacgttattgatgatgt |
27877812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 310
Target Start/End: Complemental strand, 10395644 - 10395358
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| || |||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10395644 |
agatgtgggggaaactgttgggctaca-acggctttggattggctctctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
10395546 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||| ||| |||||||| ||||| |
|
|
| T |
10395545 |
gattgtgtcaattcaagtttagatgatagtagcgagtttggatgtattagcactgcttgtaaacagctgctagttgataaattccagaactcttatgtta |
10395446 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||| |
|
|
| T |
10395445 |
agttcagcaggaggcaagcaaatagggtagctcacgagttagctcaagcagccatgtctgatcctagcccccatgttattgatgatgt |
10395358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 46 - 310
Target Start/End: Original strand, 17321722 - 17321986
Alignment:
| Q |
46 |
tacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttaga |
145 |
Q |
| |
|
|||||||| ||||||||||| | ||||||||||||||||| ||||| ||||||| |||||||| |||| ||||||||||| ||||| |||||| |||| |
|
|
| T |
17321722 |
tacacacaactttggattggatctctaatcaacagtttgacaatgtcgattttgcacttgattgcaaaaaagttgttgattgtgtcaattctagtataga |
17321821 |
T |
|
| Q |
146 |
tgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaat |
245 |
Q |
| |
|
||| ||||||||||||||||| ||||| | |||||||||||| || || | ||||||||| ||||||||||||| | ||||| |||||||||||||||| |
|
|
| T |
17321822 |
tgacagtagcgagtttggatgcattattagtgcttgtaaacagttgttattggatagatttcagaactctcatgtcgagttcaacaggaggcaagcaaat |
17321921 |
T |
|
| Q |
246 |
agggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
17321922 |
agggtagctcacgagttagctcaagcagccctatctaatcctagcccccatattattgatgatgt |
17321986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 60 - 310
Target Start/End: Original strand, 12538958 - 12539227
Alignment:
| Q |
60 |
gattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagtagcgagt |
159 |
Q |
| |
|
|||||| |||| |||||||||||||| | || ||||||||||||||||||||||| ||||||||||| || || |||| |||||||||||||||| | |
|
|
| T |
12538958 |
gattggatttccaatcaacagtttgacagcgtcgattttgttcttgattgtaaaagagttgttgattgtgttaatgctagcctagatgatagtagcgaat |
12539057 |
T |
|
| Q |
160 |
ttggatgtattatcactgcttgta-------------------aacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaag |
240 |
Q |
| |
|
|||| |||||||| |||||||||| |||||||| |||| ||||||||| ||||||||||||| | ||||| ||||||||||| |
|
|
| T |
12539058 |
ttgggtgtattattactgcttgtaaacagttgctagtggtgtaaacaactgttagtggatagatttcagaactctcatgtcgagttcaacaggaggcaag |
12539157 |
T |
|
| Q |
241 |
caaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
12539158 |
caaataggatagctcacgagttagctgatgcagccatgtctaatcctagcccccatattattgatgatgt |
12539227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 40609930 - 40610038
Alignment:
| Q |
202 |
gatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttat |
301 |
Q |
| |
|
||||| ||||||||||||||| ||||| ||| || ||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
40609930 |
gatttcagaactctcatgttgagttcatcagaagataagtaaatagggtagcttacgagttaattcaggcagccctgtctaatcctaacccccacgttat |
40610029 |
T |
|
| Q |
302 |
tgatgatgt |
310 |
Q |
| |
|
||||||||| |
|
|
| T |
40610030 |
tgatgatgt |
40610038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 308
Target Start/End: Original strand, 2114299 - 2114465
Alignment:
| Q |
142 |
tagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagc |
241 |
Q |
| |
|
||||||||| || |||| |||| ||||| || |||||||||||| | |||| |||||||| ||||||||||||| | ||||| ||||| | |||| |
|
|
| T |
2114299 |
tagatgataataacgagcttgggtgtatcatatatgcttgtaaacacttattagttaatagatttcagaactctcatgtcgagttcaacaggaaggaagc |
2114398 |
T |
|
| Q |
242 |
aaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||| |||| |||||||| |||||| |||||||||| || ||||||||||||| ||||| |||||| |
|
|
| T |
2114399 |
gaatggggtcgctcacgaattagcttaggcagccctatccaatcctagcccccgtgttatagatgat |
2114465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 295
Target Start/End: Complemental strand, 3601355 - 3601236
Alignment:
| Q |
176 |
tgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagcc |
275 |
Q |
| |
|
||||||||||||| | |||| |||||||| ||||||||||||| | ||||| ||||||||||| ||| ||| ||||||||||||||| || || || |
|
|
| T |
3601355 |
tgcttgtaaacaattattagttaatagatttcagaactctcatgtcgagttcaataggaggcaagcgaatgaggttgctcacgagttagcttagacaacc |
3601256 |
T |
|
| Q |
276 |
ctgtctaatcctagccccca |
295 |
Q |
| |
|
|| ||||||| ||| ||||| |
|
|
| T |
3601255 |
ctatctaatcatagtcccca |
3601236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 23 - 310
Target Start/End: Complemental strand, 23059628 - 23059341
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| ||| |||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
23059628 |
agatgtgggggaagctgttgggctacacacggctttggattggctctctaatcaacaatttgataatgtagattttgttcttgattgtaaaaaggttgtt |
23059529 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
||||| ||||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
23059528 |
gattgtgtcaattctagtctagaagatagtagcgagtttggatgtattatcactacttgtaaacagctgctagttgatagatttcagaactctcatgttg |
23059429 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
23059428 |
agttcagccggaggcaagcaaatagggtagctcacgagttagctcaggcagtcctatctaatcctagcccccatgtgattgatgatgt |
23059341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 54 - 310
Target Start/End: Original strand, 16888997 - 16889252
Alignment:
| Q |
54 |
gctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagta |
153 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| | |||| ||||||| |
|
|
| T |
16888997 |
gctttggattggctctctaatcaacaatttgataatgtagattttgttcttgattgtaaaaaggttgttgattgtgtcaattctaatctagaagatagta |
16889096 |
T |
|
| Q |
154 |
gcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagc |
253 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | |||||| ||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
16889097 |
gcgagtttggatgtattatcactgtttgtaaacagccgctagttgatagatttcagaactctcatgttgagttcagtcggaggcaagcaaatagggtagc |
16889196 |
T |
|
| Q |
254 |
tcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||| |||| || ||||||||||| |
|
|
| T |
16889197 |
tcacgagttagctca-gcagccctatctaatcctagctcccatgtgattgatgatgt |
16889252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 37857104 - 37856972
Alignment:
| Q |
176 |
tgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagcc |
275 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||| | | |
|
|
| T |
37857104 |
tgcttgtaaacaactgctagaggatagatttcagaactctcatgttgagttcaacaggaggcaagcaaatagagtagctcacgagttagctcaggcggtc |
37857005 |
T |
|
| Q |
276 |
ctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||| ||||||| | |||||| ||||||||||| |
|
|
| T |
37857004 |
ctgcctaatcccaacccccatattattgatgat |
37856972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 35096868 - 35097000
Alignment:
| Q |
159 |
tttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacg |
258 |
Q |
| |
|
||||| ||||||||| | |||||||||||| || |||| ||||||||| ||||||||||||| | ||||| || ||||||||||||||||| ||||||| |
|
|
| T |
35096868 |
tttggttgtattatctccgcttgtaaacaaatgttagtggatagatttcagaactctcatgtcgagttcaatagaaggcaagcaaatagggttgctcacg |
35096967 |
T |
|
| Q |
259 |
agttagctcaggcagccctgtctaatcctagcc |
291 |
Q |
| |
|
||||||||||| || |||| ||||||||||||| |
|
|
| T |
35096968 |
agttagctcagacaaccctatctaatcctagcc |
35097000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 17283757 - 17283563
Alignment:
| Q |
74 |
tcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatc |
173 |
Q |
| |
|
|||||||||||||||||| || |||| |||||||| |||||| ||||||||| || || || | ||||| ||| || ||||||||| ||||| || |
|
|
| T |
17283757 |
tcaacagtttgataatgtggactttgctcttgattctaaaagagttgttgatcttgtgaattcacatgtagataataataacgagtttggttgtatcata |
17283658 |
T |
|
| Q |
174 |
actgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctca |
268 |
Q |
| |
|
||||||||||||||| |||| |||||||| |||||||| |||| | ||||| ||||||||| | ||| |||| ||||||||||| |||| |
|
|
| T |
17283657 |
tttgcttgtaaacaactattagtcaatagatttcagaactcttatgtcgagttcaataggaggcaaacgaatggggtgactcacgagttaactca |
17283563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 6969552 - 6969688
Alignment:
| Q |
142 |
tagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagc |
241 |
Q |
| |
|
||||||||| ||| |||||||| ||||| || ||||||||| |||| || || | |||||||| ||||||||||||| | |||| | |||| ||| |
|
|
| T |
6969552 |
tagatgataatagtgagtttggttgtataatttctgcttgtagacaattgttacaaaatagatttcagaactctcatgtcgatttcaataagaggtaagt |
6969651 |
T |
|
| Q |
242 |
aaatagggtagctcacgagttagctcaggcagccctg |
278 |
Q |
| |
|
|||| |||| |||||||||||||||||| |||||||| |
|
|
| T |
6969652 |
aaatggggtcgctcacgagttagctcagacagccctg |
6969688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 37857185 - 37857109
Alignment:
| Q |
57 |
ttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaa |
133 |
Q |
| |
|
||||||||| | ||||||||||| ||||||||||| |||||| | ||||||||||||| |||||||||| ||||| |
|
|
| T |
37857185 |
ttggattggatctctaatcaacaatttgataatgttgattttatacttgattgtaaaatatttgttgattgtgtcaa |
37857109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 301
Target Start/End: Original strand, 46078338 - 46078560
Alignment:
| Q |
78 |
cagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactg |
177 |
Q |
| |
|
|||||| ||||||| || |||| |||||||| |||||| |||||||||| || || || || ||||||||| | ||||||||| |||||||| ||| |
|
|
| T |
46078338 |
cagtttaataatgtggactttgatcttgattctaaaagagttgttgattttgtgaattcacgtgtagatgataacaacgagtttggttgtattatatctg |
46078437 |
T |
|
| Q |
178 |
cttgtaaacaactgctagtagataga-tttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccc |
276 |
Q |
| |
|
|||||||| | | ||| ||||| ||| ||||||||||||| | | ||| || ||||||| |||||| ||| |||||||||||| || || || ||| |
|
|
| T |
46078438 |
cttgtaaatagttatcagttaatagattttcagaactctcatgtcgagctcaacaagaggcaaacaaata-ggtcgctcacgagttaacttagaca-ccc |
46078535 |
T |
|
| Q |
277 |
tgtctaatcctagcccccacgttat |
301 |
Q |
| |
|
| |||||||||||||||| ||||| |
|
|
| T |
46078536 |
tacctaatcctagcccccatgttat |
46078560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 9633058 - 9633154
Alignment:
| Q |
199 |
atagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagccccca |
295 |
Q |
| |
|
|||||||| ||||||||||||| | ||||| |||||||||| ||| |||| | | |||||||||||||| || ||| || ||| |||||||||| |
|
|
| T |
9633058 |
atagatttcagaactctcatgtcgagttcaataggaggcaagtgaatggggtcgattacgagttagctcagacaatcctatccaatactagccccca |
9633154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 27 - 308
Target Start/End: Complemental strand, 26951723 - 26951442
Alignment:
| Q |
27 |
gtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgatt |
126 |
Q |
| |
|
|||||| ||| |||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26951723 |
gtgggggaagctgttggactacacacaactttggattggctctctaatcaacaatttgataatgtagattttgttcttgattgtaaaaaggttgttgatt |
26951624 |
T |
|
| Q |
127 |
gcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgtt |
226 |
Q |
| |
|
| ||||| | |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |
|
|
| T |
26951623 |
gtgtcaattatagtctagaagatagtagcaagtttggatgtattatcactgcttgtaaacaactgctagttgatagatttcagaactctcatgttgagtt |
26951524 |
T |
|
| Q |
227 |
cagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |
|
|
| T |
26951523 |
cagccggaggcaagcaaatagggtagctcacgagttagctcaggcagccctatctaatcctagcccccatgtgattgatgat |
26951442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 23 - 256
Target Start/End: Complemental strand, 21276674 - 21276442
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| | ||||||||| ||||||||| | || ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21276674 |
agatgtgggggaggttgttggtttacacacagatctg-attggctctctaatcaacattttgataatgtagattttgttcttgattgtaaaagggttgtt |
21276576 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||| |
|
|
| T |
21276575 |
gattgtgtcaattctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacagctgttagtagatagatttcaaaactctcatgttg |
21276476 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctca |
256 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||| |
|
|
| T |
21276475 |
agttcagcaagaggcaagcaaataggatagctca |
21276442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 57 - 310
Target Start/End: Original strand, 33324567 - 33324816
Alignment:
| Q |
57 |
ttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagtagcg |
156 |
Q |
| |
|
||||||||| | ||||||||||| ||||||||||| |||||||| ||||||||||||| |||||| |||| ||||| | |||||||||||||| | | |
|
|
| T |
33324567 |
ttggattggatctctaatcaacaatttgataatgtcgattttgtacttgattgtaaaaaagttgttaattgtgtcaattttagtttagatgataacaatg |
33324666 |
T |
|
| Q |
157 |
agtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctca |
256 |
Q |
| |
|
| |||| ||||||||| ||||||||||||| ||| || |||||||| | |||||| | ||| ||||| ||||||||| ||||||| |||||| || |
|
|
| T |
33324667 |
aatttgaatgtattattgctgcttgtaaacagttgcaagaggatagattccaaaactct--tattgagttcaacaggaggcacgcaaata-ggtagccca |
33324763 |
T |
|
| Q |
257 |
cgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||| ||| ||||| ||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
33324764 |
cgaactagttcaggtagccctgtctaatccta-accccatattattgatgatgt |
33324816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 18178961 - 18179024
Alignment:
| Q |
38 |
tgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgtt |
101 |
Q |
| |
|
|||||| || |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
18178961 |
tgttggactgcacaaagctttggattggctctctaatcaacagtttgataatgtagattttgtt |
18179024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 23556581 - 23556668
Alignment:
| Q |
46 |
tacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaa |
133 |
Q |
| |
|
|||||||| ||||||||||| |||| |||| ||||||| ||||| |||||||| ||||||||||||| ||||||||||| ||||| |
|
|
| T |
23556581 |
tacacacaactttggattggacctctattcaatagtttgacaatgtcgattttgtatttgattgtaaaagagttgttgattgtgtcaa |
23556668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 23 - 308
Target Start/End: Complemental strand, 26731158 - 26730873
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| ||| |||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26731158 |
agatgtgggggaagctgttggactacacacggctttggattgactctctaatcaacagtttgataatgtagattttgttcttgattgtaaaaaggttgtt |
26731059 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
||||| ||||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||| || ||||| ||||||||| ||||||||||||||| |
|
|
| T |
26731058 |
gattgtgtcaattctagtctagaagatagtagcgagtttggatgtattatcactacttgtaaacagctactagttgatagatttcagaactctcatgttg |
26730959 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |
|
|
| T |
26730958 |
agttcagccggaggcaagcaaatagggtagcacacgagttagctcaggcagccctatctaatcctagcccccatgtgattgatgat |
26730873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 23 - 308
Target Start/End: Complemental strand, 47704022 - 47703737
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| ||| |||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
47704022 |
agatgtgggggaagctgttggactacacacggctttggattggctctctaatcaacaatttgataatgtagattttgttcttgattgtaaaaaggttgtt |
47703923 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
47703922 |
gattgtgtcaattctagtctagaagatagtagcgagtttggatgtattatcaccgcttgtaaacagctgctagttgatagatttcagaactctcatgttg |
47703823 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||| |
|
|
| T |
47703822 |
agttatgccggaggcaagcaaatagggtagctcacgagttagctcaggcagccctatataatcctagcccccatgtgattgatgat |
47703737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 23 - 310
Target Start/End: Complemental strand, 1017913 - 1017626
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| ||| ||| || |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
1017913 |
agatgtgggggaagctgtgggactacacacggctttggattggctctctaatcaacaatttgataatgtagattttgttcttgattgaaaaaaggttgtt |
1017814 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
1017813 |
aattgtgtcaattctagtctagcggatagtagcgagtttggatgtattattactgcttgtaaacatatgctagttgatagatttcagaactctcatgttg |
1017714 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
1017713 |
agttcaaccggaggcaagcaaatagggtagctcacgagttagctcagacagccctatctaatcctagcccccatgtgattgatgatgt |
1017626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 48 - 277
Target Start/End: Complemental strand, 10346745 - 10346516
Alignment:
| Q |
48 |
cacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatg |
147 |
Q |
| |
|
|||||| ||||||||||| | ||||||||||| ||||||||||| | |||| ||||| |||||||| ||||||||||| ||||| | | | |||||| |
|
|
| T |
10346745 |
cacacaactttggattggatctctaatcaacaatttgataatgtgaactttgcacttgactgtaaaagagttgttgattgtgtcaattaaaatatagatg |
10346646 |
T |
|
| Q |
148 |
atagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatag |
247 |
Q |
| |
|
|||||||||| |||||||||||||| ||| ||||||| ||| || |||| ||||||||| ||||||| ||||| | ||||| |||||||||||| ||||| |
|
|
| T |
10346645 |
atagtagcgaatttggatgtattattactacttgtaaccaaatgttagtggatagatttcagaactcgcatgtagagttcaacaggaggcaagcgaatag |
10346546 |
T |
|
| Q |
248 |
ggtagctcacgagttagctcaggcagccct |
277 |
Q |
| |
|
||| ||||||||||||||||||||| |||| |
|
|
| T |
10346545 |
ggtcgctcacgagttagctcaggcaaccct |
10346516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 290
Target Start/End: Complemental strand, 4525641 - 4525456
Alignment:
| Q |
102 |
cttgattgtaaaagggttgttgattgcgtcaac--tctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtaga |
199 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| | ||||||||||||||||| || ||||| |||||||| | |||||||||||| ||| ||||||| |
|
|
| T |
4525641 |
cttgattgtaaaaaagttgttgattgtgtcaatagtatagtttagatgatagtattgaatttgggtgtattattattgcttgtaaacagctgttagtaga |
4525542 |
T |
|
| Q |
200 |
tagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagc |
290 |
Q |
| |
|
|| |||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| | || || ||||||||||||||||| |
|
|
| T |
4525541 |
taaatttcagaactctcatgttgagttcagcaagaggcaagcaa-----gtagatcacgagttagttgagacaaccctgtctaatcctagc |
4525456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 20223177 - 20223262
Alignment:
| Q |
224 |
gttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
20223177 |
gttcagcagaaggcaagcaaataggatagctcacgagttagctaaggtagccctgtctaatccta-accccatgttattgatgatgt |
20223262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 20916418 - 20916486
Alignment:
| Q |
208 |
agaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccc |
276 |
Q |
| |
|
|||||||| |||||| ||||| ||||||||||| ||| ||| |||| |||||||||||| ||||||| |
|
|
| T |
20916418 |
agaactcttatgttgagttcaataggaggcaagcgaatgaggtcgctcccgagttagctcatgcagccc |
20916486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 20925380 - 20925448
Alignment:
| Q |
208 |
agaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccc |
276 |
Q |
| |
|
|||||||| |||||| ||||| ||||||||||| ||| ||| |||| |||||||||||| ||||||| |
|
|
| T |
20925380 |
agaactcttatgttgagttcaataggaggcaagcgaatgaggtcgctcccgagttagctcatgcagccc |
20925448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 23 - 308
Target Start/End: Complemental strand, 28590239 - 28589954
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
||||| |||| ||| |||||| |||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
28590239 |
agatgcgggggaagctgttggactacacacgactttggattggctctctaatcaacaatttgataatgtagattttgttcttgattgtaaaaaagttgtt |
28590140 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
28590139 |
gattgtgtcaattctagtctagaagatagtagcgagtttggatgtattatcactgcttgtaaacagctgctagttgatagatttcagaactctcatgttg |
28590040 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |
|
|
| T |
28590039 |
agttcagccggaggcaagcaaatagggtagctcacgagttagctcaggcagccctatctaatcctagcccccatgtgattgatgat |
28589954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 23 - 308
Target Start/End: Complemental strand, 41316152 - 41315867
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| ||| |||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
41316152 |
agatgtgggggaagctgttggactacacacggctttggattggctctctaatcaacaatttgataatgtagattttgttcttgattgtaaaaaggttgtt |
41316053 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
||||| ||||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
41316052 |
gattgtgtcaattctagtctagaagatagtagcgagtttggatgtattatcactacttgtaaacagctgctagttgatagatttcagaactctcatgttg |
41315953 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| |||||||| |||| |||||| |||||||||| || ||||||||| |
|
|
| T |
41315952 |
agttcagccggaggcaagcaaatagggtagctcacgagttaactcaggcaaccctatctaatactagcccccatgtgattgatgat |
41315867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 10977615 - 10977866
Alignment:
| Q |
57 |
ttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagtagcg |
156 |
Q |
| |
|
||||||||| | ||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||| ||||| ||||||||||||||||| || | |
|
|
| T |
10977615 |
ttggattggatctctaatcaacaatttgataatgtcgattttgtacttgattgtaaaataattgttgattgtgtcaattctagtttagatgatagcagtg |
10977714 |
T |
|
| Q |
157 |
agtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctca |
256 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||||| || |||||||| |||||||||||| || |
|
|
| T |
10977715 |
attttggatgtattattgctgcttgtaaacaactgctagagaatagattccagaactctcatgttgagttcaacatgaggcaagtaaatagggtagccca |
10977814 |
T |
|
| Q |
257 |
cgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||| ||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10977815 |
tgagctagctcaggtagccctgtctaatcctagcccccatattattgatgat |
10977866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 23 - 308
Target Start/End: Original strand, 30304645 - 30304930
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| ||| |||||| |||||||| |||||||||||||| ||||||||| | |||||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
30304645 |
agatgtgggggaagctgttggactacacacggctttggattggctctctaatcaaaaatttgataatgtagattttgtgctggattgtaaaaaggttgtt |
30304744 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| |
|
|
| T |
30304745 |
gattgtgtcaattctagtctagaagatagtagcgagtttggatgtattatcactgcttgtaaacagctgctagttgatagttttcagaactctcatgttg |
30304844 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |
|
|
| T |
30304845 |
agttcagccggaggcaagcaaatagggtagctcacgagttagctcaggcagccctatctaatcctagcccccatgtgattgatgat |
30304930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 26 - 310
Target Start/End: Original strand, 24275069 - 24275353
Alignment:
| Q |
26 |
tgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgat |
125 |
Q |
| |
|
||||||| ||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24275069 |
tgtgggggaagctgttggactacacacggctttggattggctctctaatcaacagtttgataatgtagattttgttcttgattgtaaaaaggttgttgat |
24275168 |
T |
|
| Q |
126 |
tgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgt |
225 |
Q |
| |
|
|| ||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||| ||||||||| || |
|
|
| T |
24275169 |
tgtgtcaattctagtctagaagatagtagcgagtttggatgttttatcactgcttgtaaacaactgctagttgataaatttcagaacactcatgttgagt |
24275268 |
T |
|
| Q |
226 |
tcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
|||| | ||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
24275269 |
tcagtcgaaggcaagcaaataaggtagctcacgagttagctcaggcatccctatctaatcctagcccccatgtgattgatgatgt |
24275353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 26 - 310
Target Start/End: Complemental strand, 24387144 - 24386860
Alignment:
| Q |
26 |
tgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgat |
125 |
Q |
| |
|
||||||| ||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24387144 |
tgtgggggaagctgttggactacacacggctttggattggctctctaatcaacagtttgataatgtagattttgttcttgattgtaaaaaggttgttgat |
24387045 |
T |
|
| Q |
126 |
tgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgt |
225 |
Q |
| |
|
|| ||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||| ||||||||| || |
|
|
| T |
24387044 |
tgtgtcaattctagtctagaagatagtagcgagtttggatgttttatcactgcttgtaaacaactgctagttgataaatttcagaacactcatgttgagt |
24386945 |
T |
|
| Q |
226 |
tcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
|||| | ||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
24386944 |
tcagtcgaaggcaagcaaataaggtagctcacgagttagctcaggcatccctatctaatcctagcccccatgtgattgatgatgt |
24386860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 38 - 310
Target Start/End: Original strand, 24870269 - 24870541
Alignment:
| Q |
38 |
tgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactct |
137 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
24870269 |
tgttggactacacacaactttggattggctctctaatcaatagtttgacaatgtcgattttgctcttgattgtaaaagggttgttgattgtgtcaattct |
24870368 |
T |
|
| Q |
138 |
agtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggc |
237 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||| ||||| ||| |||| |
|
|
| T |
24870369 |
agtttagatgatagtagcgagtttgaatgtattatcactgcttgtaaacagctgctagtagatagatttcagaactctcaagttgagttcaacagaaggc |
24870468 |
T |
|
| Q |
238 |
aagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
|| |||||||| |||| |||||||||||||| |||||||||||||| |||| || ||| ||||||||||||| |
|
|
| T |
24870469 |
aaacaaataggatagcacacgagttagctcaagcagccctgtctaaccctaacctccatattattgatgatgt |
24870541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 55 - 290
Target Start/End: Complemental strand, 8703751 - 8703514
Alignment:
| Q |
55 |
ctttggattggctttctaatcaacagtttgataat--gtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttagatgatagt |
152 |
Q |
| |
|
||||||||| | ||||||||||||||||||| ||| || ||||||| |||||||||||||| ||||||||| | ||||| || | | ||||||||| |
|
|
| T |
8703751 |
ctttggattcgatttctaatcaacagtttgacaatatgttgattttgcacttgattgtaaaagagttgttgatagtgtcaattcaaacattgatgatagt |
8703652 |
T |
|
| Q |
153 |
agcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtag |
252 |
Q |
| |
|
| ||| ||||| |||| ||| ||||||||||||| || |||| |||||||| |||||||||||||| ||||| || ||||||||| |||||||||| |
|
|
| T |
8703651 |
accgaatttgggtgtaatattcctgcttgtaaacagttgatagtgaatagatttcggaactctcatgttgtgttcaacacgaggcaagcgaatagggtag |
8703552 |
T |
|
| Q |
253 |
ctcacgagttagctcaggcagccctgtctaatcctagc |
290 |
Q |
| |
|
|| ||| ||||| ||||||| |||| |||||| ||||| |
|
|
| T |
8703551 |
cttacgggttagatcaggcaaccctatctaattctagc |
8703514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 32620630 - 32620677
Alignment:
| Q |
232 |
ggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgt |
279 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| || ||||||| |
|
|
| T |
32620630 |
ggaggcaagcaaatagggttgctcacgagttagctcacgcggccctgt |
32620677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 23 - 308
Target Start/End: Complemental strand, 255652 - 255368
Alignment:
| Q |
23 |
agatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgtt |
122 |
Q |
| |
|
|||||||||| ||| |||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
255652 |
agatgtgggggaagctgttggactacacacggctttggattggctctctaatcaacaatttgataatgtagattttgttcttgattgcaaaagg-ttgtt |
255554 |
T |
|
| Q |
123 |
gattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttg |
222 |
Q |
| |
|
|||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||| |
|
|
| T |
255553 |
gattatgtcaattctagtctagaagatagtagcgagtttggatgtattatcactgcttgtaaacagctgctagttgatagatttcagaattctcatgttg |
255454 |
T |
|
| Q |
223 |
cgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgat |
308 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||||||||| |
|
|
| T |
255453 |
agttcagccggaggcaagcaaatagggtagctcacgggttagctcaggcagccctatctaatcctagcccccatatgattgatgat |
255368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 153; Significance: 4e-81; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 46 - 310
Target Start/End: Original strand, 9451307 - 9451571
Alignment:
| Q |
46 |
tacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagggttgttgattgcgtcaactctagtttaga |
145 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |
|
|
| T |
9451307 |
tacacacaactttggattggatctctaatcaaccgtttgacaatgtcgattttgttcttgattgtaaaagagttgttgattgtgtcaattctagcttaga |
9451406 |
T |
|
| Q |
146 |
tgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaat |
245 |
Q |
| |
|
|||||| || || ||||| |||||||| |||||||||||||||| ||| |||||||||||| ||||||||||| | | ||||| |||||| ||| ||||| |
|
|
| T |
9451407 |
tgatagaagtgaatttgggtgtattattactgcttgtaaacaacggctggtagatagatttcagaactctcatatcgagttcaacaggagacaaacaaat |
9451506 |
T |
|
| Q |
246 |
agggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9451507 |
agggtagctcacgagttaaatcaggcagccctgtctaatcctagcccccatattattgatgatgt |
9451571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 12129327 - 12129602
Alignment:
| Q |
17 |
tgttacagatgtggggaaagttgttggtctacacacagctttggattggctttctaatcaacagtttgataatgtagattttgttcttgattgtaaaagg |
116 |
Q |
| |
|
||||| |||||||||| ||| |||||| |||||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
12129327 |
tgttatagatgtgggggaagctgttggactacacacgactttggattggctctctaatcaacaatttcataatgtagattttgttcttgattgt------ |
12129420 |
T |
|
| Q |
117 |
gttgttgattgcgtcaactctagtttagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctc |
216 |
Q |
| |
|
||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||| || |
|
|
| T |
12129421 |
------------gtcaattctagtctagaagatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagttgatagatttcaaaactttc |
12129508 |
T |
|
| Q |
217 |
atgttgcgttcagcaggaggcaagcaaatagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
| |||| ||||||| | ||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||||| || ||||||||||| |
|
|
| T |
12129509 |
acgttgagttcagccgaaggcaagcaaatagggtagctcacgagttagctcaggtagccttatctgatcctagcccccatgtgattgatgatgt |
12129602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 151 - 310
Target Start/End: Original strand, 17852296 - 17852455
Alignment:
| Q |
151 |
gtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggt |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
17852296 |
gtagcgagtttggatgtattatcactgcttgtaaacagctgctagttgatagatttcagaattctcatgttgagttcagccggaggcaagcaaatagggt |
17852395 |
T |
|
| Q |
251 |
agctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||| |
|
|
| T |
17852396 |
agctcacgagttagctcaggcagccctatctaatcttagcccccatgtgattgatgatgt |
17852455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 20492423 - 20492576
Alignment:
| Q |
142 |
tagatgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagc |
241 |
Q |
| |
|
|||||||| ||||||| |||| |||||||| ||| |||||||| | |||| |||||||| ||||||||||| | | ||| | ||||||||||| |
|
|
| T |
20492423 |
tagatgatgatagcgagcttggttgtattatatctgtttgtaaacggttattagttaatagattttagaactctcatctcgagtttaataggaggcaagc |
20492522 |
T |
|
| Q |
242 |
aaatagggtagctcacgagttagctcaggcagccctgtctaatcctagccccca |
295 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| || ||| ||| |||||| |
|
|
| T |
20492523 |
gaatagggtcgctcacgaattagctcaggcagccctatccaattctaaccccca |
20492576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 310
Target Start/End: Original strand, 36677563 - 36677728
Alignment:
| Q |
145 |
atgatagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaa |
244 |
Q |
| |
|
||||||||||||||||||| ||||| || ||| |||| |||| || |||| |||| ||| | |||||||||| | ||||| ||| |||| | | || |
|
|
| T |
36677563 |
atgatagtagcgagtttggttgtatcatatatgcatgtagacaattgttagttaatagttttcaacactctcatgtcgagttcaacagaaggcgaacgaa |
36677662 |
T |
|
| Q |
245 |
tagggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
|||||| ||||| |||||||||| |||||| | |||||||||| | || ||||| |||||||| |
|
|
| T |
36677663 |
tagggtcactcacaagttagctcatatagccctatttaatcctagctcgcatgttatagatgatgt |
36677728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 10325298 - 10325250
Alignment:
| Q |
78 |
cagtttgataatgtagattttgttcttgattgtaaaagggttgttgatt |
126 |
Q |
| |
|
||||| || ||||| ||||||| |||||||| ||||||||||||||||| |
|
|
| T |
10325298 |
cagttcgacaatgtcgattttgctcttgattctaaaagggttgttgatt |
10325250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 12980730 - 12980790
Alignment:
| Q |
199 |
atagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatagggtagctcacga |
259 |
Q |
| |
|
|||||||| ||||||||||||| | ||||| |||||||||| | ||| |||| |||||||| |
|
|
| T |
12980730 |
atagatttcagaactctcatgtcgagttcaacaggaggcaaacgaatggggtcgctcacga |
12980790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0151 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0151
Description:
Target: scaffold0151; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 310
Target Start/End: Complemental strand, 21512 - 21351
Alignment:
| Q |
148 |
atagtagcgagtttggatgtattatcactgcttgtaaacaactgctagtagatagatttaagaactctcatgttgcgttcagcaggaggcaagcaaatag |
247 |
Q |
| |
|
|||||||||| ||||||||||| || |||||| ||||| || || | ||||||||| |||| |||||||| | ||||| ||||||||||| |||||| |
|
|
| T |
21512 |
atagtagcgaatttggatgtatcatttttgcttgcaaacagttgttaatggatagatttcagaa-tctcatgtcgagttcaacaggaggcaaggaaatag |
21414 |
T |
|
| Q |
248 |
ggtagctcacgagttagctcaggcagccctgtctaatcctagcccccacgttattgatgatgt |
310 |
Q |
| |
|
||||||||| |||||||||| | |||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
21413 |
ggtagctcataagttagctcaagtagccctatctaatcctagcccccatactattgatgatgt |
21351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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