View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5852_low_12 (Length: 404)

Name: NF5852_low_12
Description: NF5852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5852_low_12
NF5852_low_12
[»] chr5 (30 HSPs)
chr5 (19-300)||(3955449-3955731)
chr5 (114-195)||(27679496-27679577)
chr5 (129-175)||(14681256-14681302)
chr5 (117-195)||(16752484-16752562)
chr5 (114-195)||(43135176-43135257)
chr5 (116-195)||(9123827-9123906)
chr5 (121-164)||(15774010-15774053)
chr5 (115-174)||(19248478-19248537)
chr5 (133-195)||(3052198-3052260)
chr5 (122-188)||(18789042-18789108)
chr5 (121-195)||(21657380-21657454)
chr5 (113-155)||(35241396-35241438)
chr5 (117-175)||(37054271-37054329)
chr5 (113-155)||(38353771-38353813)
chr5 (115-156)||(2001979-2002020)
chr5 (114-155)||(6898019-6898060)
chr5 (118-195)||(9893653-9893730)
chr5 (118-159)||(10045334-10045375)
chr5 (115-156)||(20370151-20370192)
chr5 (113-178)||(26409250-26409315)
chr5 (114-179)||(42842880-42842945)
chr5 (114-195)||(42964507-42964588)
chr5 (115-175)||(2839797-2839857)
chr5 (115-155)||(5591259-5591299)
chr5 (115-159)||(10199018-10199062)
chr5 (115-155)||(16133087-16133127)
chr5 (115-171)||(17672306-17672362)
chr5 (115-195)||(27086077-27086157)
chr5 (114-194)||(28604401-28604481)
chr5 (115-155)||(36321516-36321556)
[»] chr3 (26 HSPs)
chr3 (116-195)||(22843464-22843543)
chr3 (115-155)||(48376834-48376874)
chr3 (115-155)||(48315046-48315086)
chr3 (114-194)||(55126004-55126084)
chr3 (116-187)||(3612172-3612243)
chr3 (116-195)||(13042782-13042861)
chr3 (116-195)||(13050859-13050938)
chr3 (115-150)||(32951916-32951951)
chr3 (117-196)||(52119377-52119456)
chr3 (114-184)||(2563927-2563997)
chr3 (127-177)||(7859492-7859542)
chr3 (113-155)||(8113584-8113626)
chr3 (113-155)||(41258968-41259010)
chr3 (117-155)||(54584034-54584072)
chr3 (114-155)||(46469275-46469316)
chr3 (114-179)||(47099033-47099098)
chr3 (115-155)||(529179-529219)
chr3 (115-155)||(1149091-1149131)
chr3 (115-195)||(7464473-7464553)
chr3 (115-155)||(7974534-7974574)
chr3 (116-156)||(12131694-12131734)
chr3 (115-155)||(16980376-16980416)
chr3 (115-155)||(22365971-22366011)
chr3 (115-175)||(47377351-47377411)
chr3 (115-187)||(50037310-50037382)
chr3 (115-155)||(53633639-53633679)
[»] chr6 (19 HSPs)
chr6 (115-155)||(30370172-30370212)
chr6 (113-155)||(28046200-28046242)
chr6 (115-195)||(788865-788945)
chr6 (115-195)||(4826289-4826369)
chr6 (115-174)||(8211601-8211660)
chr6 (113-155)||(4450259-4450301)
chr6 (121-195)||(15062296-15062370)
chr6 (117-174)||(1146509-1146566)
chr6 (114-195)||(8381176-8381257)
chr6 (114-159)||(11713664-11713709)
chr6 (115-152)||(26556389-26556426)
chr6 (115-188)||(28592676-28592749)
chr6 (123-156)||(34845581-34845614)
chr6 (115-187)||(404162-404234)
chr6 (115-175)||(5040835-5040895)
chr6 (115-155)||(8810639-8810679)
chr6 (115-175)||(10018399-10018458)
chr6 (127-175)||(24438284-24438332)
chr6 (116-156)||(26522472-26522512)
[»] chr4 (32 HSPs)
chr4 (115-178)||(39973150-39973213)
chr4 (115-195)||(2587683-2587762)
chr4 (116-186)||(6087747-6087817)
chr4 (117-195)||(10336968-10337046)
chr4 (115-195)||(7230279-7230359)
chr4 (115-195)||(23809948-23810028)
chr4 (118-198)||(26315765-26315845)
chr4 (115-175)||(32006499-32006559)
chr4 (127-187)||(34595926-34595986)
chr4 (115-155)||(43179172-43179212)
chr4 (115-195)||(49473644-49473724)
chr4 (115-175)||(54500568-54500628)
chr4 (116-195)||(20383488-20383567)
chr4 (116-187)||(28435238-28435309)
chr4 (116-195)||(36071144-36071223)
chr4 (116-155)||(38416057-38416096)
chr4 (117-155)||(11286803-11286841)
chr4 (115-157)||(14136090-14136132)
chr4 (113-175)||(25999394-25999456)
chr4 (117-187)||(46676488-46676558)
chr4 (117-155)||(53142607-53142645)
chr4 (118-195)||(2539285-2539362)
chr4 (114-155)||(10006338-10006379)
chr4 (115-156)||(21432616-21432657)
chr4 (116-180)||(7282557-7282621)
chr4 (115-155)||(7922272-7922312)
chr4 (115-155)||(8027419-8027459)
chr4 (115-155)||(21317360-21317400)
chr4 (115-155)||(37208039-37208079)
chr4 (115-195)||(38939516-38939596)
chr4 (127-195)||(44909835-44909903)
chr4 (115-178)||(52869008-52869072)
[»] chr2 (30 HSPs)
chr2 (116-195)||(20120703-20120782)
chr2 (113-167)||(2429013-2429067)
chr2 (116-176)||(44488011-44488071)
chr2 (116-155)||(13000685-13000724)
chr2 (115-176)||(30243249-30243310)
chr2 (115-155)||(2783006-2783046)
chr2 (115-195)||(20565057-20565137)
chr2 (115-195)||(22608526-22608606)
chr2 (115-195)||(31543011-31543091)
chr2 (115-183)||(40546315-40546383)
chr2 (113-156)||(7413210-7413253)
chr2 (116-195)||(36264461-36264540)
chr2 (114-156)||(9459078-9459120)
chr2 (113-155)||(24593373-24593415)
chr2 (114-171)||(10156015-10156072)
chr2 (114-195)||(12124682-12124763)
chr2 (114-155)||(15654891-15654932)
chr2 (114-155)||(18231495-18231536)
chr2 (114-155)||(19179072-19179113)
chr2 (115-195)||(35456802-35456883)
chr2 (115-156)||(40896530-40896571)
chr2 (115-155)||(2434932-2434972)
chr2 (115-155)||(7206124-7206164)
chr2 (122-162)||(16385419-16385459)
chr2 (115-195)||(22571847-22571927)
chr2 (115-195)||(25186224-25186304)
chr2 (115-155)||(26999109-26999149)
chr2 (115-195)||(27412818-27412898)
chr2 (116-195)||(33117386-33117466)
chr2 (115-155)||(37320539-37320579)
[»] chr1 (37 HSPs)
chr1 (116-178)||(13401597-13401659)
chr1 (119-164)||(32826718-32826763)
chr1 (115-187)||(19262897-19262969)
chr1 (118-158)||(23592129-23592169)
chr1 (115-187)||(35473951-35474023)
chr1 (115-195)||(44340882-44340962)
chr1 (115-195)||(45190251-45190331)
chr1 (115-178)||(25532972-25533035)
chr1 (115-178)||(27533242-27533305)
chr1 (113-195)||(34595868-34595951)
chr1 (115-166)||(37383802-37383853)
chr1 (115-198)||(47719086-47719169)
chr1 (117-195)||(8210367-8210445)
chr1 (122-187)||(26861114-26861179)
chr1 (117-159)||(29059423-29059465)
chr1 (116-158)||(45761390-45761432)
chr1 (117-155)||(50263381-50263419)
chr1 (114-187)||(5907797-5907870)
chr1 (115-180)||(6094421-6094486)
chr1 (115-176)||(7925363-7925423)
chr1 (114-155)||(15803259-15803300)
chr1 (114-155)||(17283949-17283990)
chr1 (113-154)||(23228518-23228559)
chr1 (115-152)||(23309463-23309500)
chr1 (114-155)||(38448888-38448929)
chr1 (115-171)||(9413797-9413853)
chr1 (115-155)||(9872127-9872167)
chr1 (115-155)||(13794530-13794570)
chr1 (115-155)||(34733399-34733439)
chr1 (127-159)||(35337141-35337173)
chr1 (115-155)||(36371062-36371102)
chr1 (127-155)||(40618921-40618949)
chr1 (115-195)||(41763137-41763217)
chr1 (115-195)||(44068855-44068935)
chr1 (114-154)||(47528470-47528510)
chr1 (121-177)||(50250300-50250356)
chr1 (115-155)||(52441533-52441573)
[»] chr8 (21 HSPs)
chr8 (115-195)||(3650519-3650599)
chr8 (113-195)||(1244687-1244769)
chr8 (129-174)||(42641665-42641710)
chr8 (115-155)||(1200367-1200407)
chr8 (115-175)||(12249487-12249547)
chr8 (115-187)||(20469301-20469373)
chr8 (115-155)||(23816789-23816829)
chr8 (115-178)||(28439958-28440021)
chr8 (115-174)||(41535322-41535381)
chr8 (114-155)||(19778063-19778104)
chr8 (118-195)||(40167324-40167401)
chr8 (142-195)||(44632167-44632220)
chr8 (114-158)||(3889888-3889932)
chr8 (127-175)||(5179804-5179852)
chr8 (115-155)||(13286130-13286170)
chr8 (115-155)||(17704012-17704052)
chr8 (115-187)||(27587220-27587292)
chr8 (115-155)||(32223901-32223941)
chr8 (115-155)||(33451371-33451411)
chr8 (115-155)||(37015858-37015898)
chr8 (115-155)||(44293574-44293614)
[»] chr7 (30 HSPs)
chr7 (115-195)||(39926520-39926600)
chr7 (115-186)||(1120022-1120093)
chr7 (113-187)||(20103444-20103518)
chr7 (113-195)||(34000259-34000341)
chr7 (114-155)||(2962748-2962789)
chr7 (113-178)||(25251507-25251572)
chr7 (115-195)||(22690018-22690098)
chr7 (115-179)||(26914666-26914730)
chr7 (115-178)||(5526724-5526787)
chr7 (115-178)||(8237631-8237694)
chr7 (119-198)||(18714451-18714530)
chr7 (116-187)||(46987086-46987157)
chr7 (115-157)||(1398417-1398459)
chr7 (127-197)||(27833381-27833451)
chr7 (116-154)||(34607010-34607048)
chr7 (114-155)||(5833040-5833081)
chr7 (115-184)||(20455135-20455204)
chr7 (114-155)||(26816686-26816727)
chr7 (115-156)||(29166298-29166339)
chr7 (114-155)||(38858194-38858235)
chr7 (115-155)||(5584646-5584686)
chr7 (115-155)||(5589606-5589646)
chr7 (115-155)||(8683069-8683109)
chr7 (115-195)||(16537518-16537598)
chr7 (115-195)||(16628064-16628144)
chr7 (115-159)||(21164776-21164820)
chr7 (117-149)||(25155545-25155577)
chr7 (115-195)||(27462418-27462498)
chr7 (115-195)||(35666302-35666382)
chr7 (115-155)||(36803837-36803877)
[»] scaffold0003 (1 HSPs)
scaffold0003 (115-177)||(361248-361310)
[»] scaffold0238 (1 HSPs)
scaffold0238 (114-197)||(25387-25470)
[»] scaffold0004 (1 HSPs)
scaffold0004 (113-155)||(91584-91626)
[»] scaffold0896 (1 HSPs)
scaffold0896 (115-155)||(3140-3180)
[»] scaffold0027 (1 HSPs)
scaffold0027 (115-187)||(61560-61632)
[»] scaffold0011 (1 HSPs)
scaffold0011 (117-177)||(189972-190032)


Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 300
Target Start/End: Original strand, 3955449 - 3955731
Alignment:
Q  19 ggtgaaccattgtgatttgtcaatgttccggtcattttaaacgtacacttaatgctcaaaaatatttcaagtctaccaaagcagagctacatagtccgtg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3955449 ggtgaaccattgtgatttgtcaatgttccggtcattttaaacgtacacttaatactcaaaaatatttcaagtctaccaaagcagagctagatagtccgtg 3955548  T
Q  119 agcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac-agaaaaaagagcagagctatataaataaag 217  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||| |||| || |||||||||||| | ||||||||||| |||| ||||||||||     
T  3955549 agcttagttcaattggtaaagacaatgcataatatatgtaatgttcggggttcgaatcccagacaccacaaaaaaaaagagcaaagctgtataaataaat 3955648  T
Q  218 agtaataatttttattattattagtagcggtggacgagcactctctgcctttgtatatgttcttttattgtgctaacgcgtgt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3955649 agtaataatttttattattattagtagcggtggacgagcactctctgcctttgtatatgttcttttattgtgctaacgcgtgt 3955731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 27679496 - 27679577
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||| |||||||||||||||||||||||||||||  || |||||| ||||||| ||| ||||||||| ||||||    
T  27679496 ccgtgagcttagctcagttggtaaagataatgcataatatatgcaaggttcggggttcaaatcccggacaccacaaaaaaaa 27679577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 14681302 - 14681256
Alignment:
Q  129 agttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||    
T  14681302 agttggtaaagataatgcataatatatagaaggttcggggttcaaac 14681256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 16752562 - 16752484
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||||||||||||| || ||||||||||||||  ||  ||||| |||| || ||||| ||||||| ||||||    
T  16752562 tgagcttagttcagttggtaaggacaatgcataatatatgcaagattcggggttcgaatcccagccaccacaaaaaaaa 16752484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 43135257 - 43135176
Alignment:
Q  114 ccgtgagctt-agttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||| || ||| |||||||||| |||||||||||||| ||| || ||| ||||||| ||||||||||||| ||||||    
T  43135257 ccgtgagctttagctcaattggtaaagacaatgcataatatatgtaaggtccgg-gttcaaatcccagacaccacaaaaaaaa 43135176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 9123906 - 9123827
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||  |||||||||||||| |||||||||||||| |||  | ||  |||| |||| ||||||||||| ||||||    
T  9123906 gtgagcttaactcagttggtaaagacaatgcataatatatgtaagatccgaagttcgaacctcagacaccacaaaaaaaa 9123827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 15774053 - 15774010
Alignment:
Q  121 cttagttcagttggtaaagataatgcataatatatataatgttc 164  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||    
T  15774053 cttagttcagttggtatagataatgcataatatatgtaaggttc 15774010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 19248478 - 19248537
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaa 174  Q
    ||||||||||| |||||||||| ||| ||||||||||||||  |||||| || |||||||    
T  19248478 cgtgagcttagctcagttggtatagacaatgcataatatatgcaatgtttggggttcaaa 19248537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 3052198 - 3052260
Alignment:
Q  133 ggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||| ||||||||||||||||| ||| ||| || ||||||| ||||| ||||||| ||||||    
T  3052198 ggtaaggataatgcataatatatgtaaggtttggggttcaaatcccagccaccacaaaaaaaa 3052260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 18789042 - 18789108
Alignment:
Q  122 ttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccaca 188  Q
    |||| |||||||||| ||| ||||||||| ||||  || |||||| ||||||||||||| |||||||    
T  18789042 ttagctcagttggtagagacaatgcataaaatatgcaaggttcggggttcaaaccccagccaccaca 18789108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 21657454 - 21657380
Alignment:
Q  121 cttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||| |||  || |||||||||||||| ||| ||| |  ||||||||| ||||||||||| ||||||    
T  21657454 cttagttcagtttgtagggacaatgcataatatatgtaaggtttgaggttcaaacctcagacaccacaaaaaaaa 21657380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 35241396 - 35241438
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||||||||||||||| ||||| |||||| |||||    
T  35241396 tccgtgagcttagttcagttggtagagatattgcatattatat 35241438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 37054329 - 37054271
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    |||| |||| ||||||||||  || |||||||||||||||||| |||||| ||||||||    
T  37054329 tgagtttagctcagttggtagggacaatgcataatatatataaggttcggggttcaaac 37054271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 38353771 - 38353813
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||||||||||||| || || |||||||||||    
T  38353771 tccgtgagcttagttcagttggtaaggacaacgcataatatat 38353813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 2001979 - 2002020
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    |||||||||| ||||||||||||||| | |||||||||||||    
T  2001979 cgtgagcttatttcagttggtaaagacattgcataatatata 2002020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 6898019 - 6898060
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||  | |||||||||||||||||||||||||||    
T  6898019 ccgtgagcttaacttagttggtaaagataatgcataatatat 6898060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 9893730 - 9893653
Alignment:
Q  118 gagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||| ||||||| || ||||||||||||| ||||  || ||  || ||||||||||||| ||||||| ||||||    
T  9893730 gagcttagctcagttgatatagataatgcataaaatatgcaaggtctggggttcaaaccccagccaccacaaaaaaaa 9893653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 10045334 - 10045375
Alignment:
Q  118 gagcttagttcagttggtaaagataatgcataatatatataa 159  Q
    |||||||  |||||||||||||||||| ||||||||||||||    
T  10045334 gagcttaactcagttggtaaagataatacataatatatataa 10045375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 20370192 - 20370151
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    ||||||||||| ||||||||||  ||||||||||||||||||    
T  20370192 cgtgagcttagctcagttggtagggataatgcataatatata 20370151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 26409250 - 26409315
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    ||||||||||||| ||||||||||  || |||||||||||||| ||| || ||| |||| ||||||    
T  26409250 tccgtgagcttagctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaacccc 26409315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 42842945 - 42842880
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccca 179  Q
    |||||||||||| |||||||||| ||||| || ||| ||||||||| |  ||| ||||||||||||    
T  42842945 ccgtgagcttagctcagttggtagagatattgtatattatatataagggccggggttcaaacccca 42842880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 42964507 - 42964588
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||| ||||  ||||||| ||| || |||| ||||||||| ||| |||||||||||||||  | ||||||||| ||||||    
T  42964507 ccgtgaacttatctcagttgataaggacaatgtataatatatgtaaggttcggtgttcaaacatcggacaccacaaaaaaaa 42964588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 2839797 - 2839857
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    ||||||||||| |||||||||   |||||||||||||||||  || |||||| ||||||||    
T  2839797 cgtgagcttagctcagttggtttggataatgcataatatatccaaggttcggggttcaaac 2839857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 5591259 - 5591299
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||| ||||||||||||||| ||||||| ||||||||||    
T  5591259 cgtgagtttagttcagttggtagagataatacataatatat 5591299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 10199018 - 10199062
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataa 159  Q
    ||||||||||| ||||||||||  || ||||||||||||||||||    
T  10199018 cgtgagcttagctcagttggtatggacaatgcataatatatataa 10199062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 16133127 - 16133087
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  16133127 cgtgagcttagctcagttggtaaggacaatgcataatatat 16133087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 17672362 - 17672306
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttc 171  Q
    ||||||||||| ||||||| ||| ||  ||||||||||||||||| |||||| ||||    
T  17672362 cgtgagcttagctcagttgataaggacgatgcataatatatataaggttcggggttc 17672306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 27086077 - 27086157
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||||||||| ||||  | |||| |||||||||  || || | | ||||||||||||| ||||||| ||||||    
T  27086077 cgtgagcttagttcagtttgtaagaacaatgtataatatatgcaaggtccagggttcaaaccccagccaccacaaaaaaaa 27086157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 28604481 - 28604401
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaa 194  Q
    ||||||| |||| |||||||||||||| ||||||||||| || ||| || ||| |||| || | | ||||||||| |||||    
T  28604481 ccgtgagtttagctcagttggtaaagacaatgcataataaatgtaaggtccggggttcgaatcacggacaccacaaaaaaa 28604401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 36321556 - 36321516
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  36321556 cgtgagcttagctcagttggtaaggacaatgcataatatat 36321516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 22843464 - 22843543
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||| |||||| ||| ||||||||||||||||| ||||||    
T  22843464 gtgagcttagctcagttagtaaagacaatgcataatatatgtaaggttcggggttgaaaccccagacaccacacaaaaaa 22843543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 48376834 - 48376874
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  48376834 cgtgagcttagctcagttggtaaagataatgcataatatat 48376874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 48315086 - 48315046
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  48315086 cgtgagcttagctcagttggtaaggataatgcataatatat 48315046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 55126004 - 55126084
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaa 194  Q
    |||||||||||| ||||||| | | || ||| ||||||||||  || |||||  ||||||||||||||||||||| |||||    
T  55126004 ccgtgagcttagctcagttgatgaggacaatacataatatatgcaaggttcgaggttcaaaccccagacaccacaaaaaaa 55126084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 3612243 - 3612172
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    |||||||||| ||||||| ||  |||||||||||||||||||||  | ||| |||||| |||||| ||||||    
T  3612243 gtgagcttagctcagttgatatggataatgcataatatatataagctccggggttcaatccccagccaccac 3612172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 13042861 - 13042782
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||| |||||||||||||| |||  |||||||||  || || ||| |||| ||||||| |||||||| ||||||    
T  13042861 gtgagcttagctcagttggtaaagacaatttataatatatgcaaggtccggggttcgaaccccaaacaccacaaaaaaaa 13042782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 13050938 - 13050859
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||| |||||||||||||| |||  |||||||||  || || ||| |||| ||||||| |||||||| ||||||    
T  13050938 gtgagcttagctcagttggtaaagacaatttataatatatgcaaggtccggggttcgaaccccaaacaccacaaaaaaaa 13050859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 32951916 - 32951951
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataa 150  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32951916 cgtgagcttagctcagttggtaaagataatgcataa 32951951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 52119377 - 52119456
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaag 196  Q
    ||||||||| ||||||||||| || ||||||||||||||  || |||||| |||| |||||| | ||||| | |||||||    
T  52119377 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcgaaccccggccaccataaaaaaaag 52119456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 2563927 - 2563997
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacac 184  Q
    |||||||||||  ||||||| |||| |||||| ||||||||| ||| |||||  ||||||||||| |||||    
T  2563927 ccgtgagcttaactcagttgataaaaataatgaataatatatgtaaggttcgaggttcaaaccccggacac 2563997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 7859542 - 7859492
Alignment:
Q  127 tcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccc 177  Q
    |||||||||| |||||||||||||||||| ||| |||||| |||| |||||    
T  7859542 tcagttggtatagataatgcataatatatgtaaggttcggggttcgaaccc 7859492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 8113626 - 8113584
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||| ||||||||||| || ||||||||||||||    
T  8113626 tccgtgagcttagctcagttggtaaggacaatgcataatatat 8113584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 41258968 - 41259010
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||| ||||||||| || ||||||||||||||    
T  41258968 tccgtgagcttagtttagttggtaaggacaatgcataatatat 41259010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 54584034 - 54584072
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||| || |||||||||||||||||||||||||||    
T  54584034 tgagcttaatttagttggtaaagataatgcataatatat 54584072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 46469275 - 46469316
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||| || ||||||||||||||    
T  46469275 ccgtgagcttagctcagttggtaaggacaatgcataatatat 46469316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 47099098 - 47099033
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccca 179  Q
    |||||||||||| ||||||| |||  ||||||||||||||||  || |||||| ||||||| ||||    
T  47099098 ccgtgagcttagctcagttgataagaataatgcataatatatgcaaggttcggggttcaaatccca 47099033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 529179 - 529219
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||||||||||  || ||||||||||||||    
T  529179 cgtgagcttagttcagttggtatcgacaatgcataatatat 529219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 1149131 - 1149091
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  1149131 cgtgagcttagctcagttggtaaggacaatgcataatatat 1149091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 7464553 - 7464473
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||  ||||||||||  || |||||||||||||| ||| || ||| |||||||||||   ||||||| ||||||    
T  7464553 cgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccacaaaaaaaa 7464473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 7974574 - 7974534
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  7974574 cgtgagcttagctcagttggtatggataatgcataatatat 7974534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 12131734 - 12131694
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  12131734 gtgagcttagttcaattggtatagacaatgcataatatata 12131694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 16980416 - 16980376
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  16980416 cgtgagcttagctcagttggtaaggacaatgcataatatat 16980376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 22365971 - 22366011
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||| ||||||||||||| ||||||||||| |||||||||    
T  22365971 cgtgaacttagttcagttgataaagataatgtataatatat 22366011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 47377411 - 47377351
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    ||||||||||  ||||||||||| || ||||||||||||||| || |||||  ||||||||    
T  47377411 cgtgagcttaactcagttggtaaggacaatgcataatatatacaaggttcgaggttcaaac 47377351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 50037310 - 50037382
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||| ||||||||||  || |||||||||| |||  || |||||| |||||||| |||| ||||||    
T  50037310 cgtgagcttagctcagttggtatggacaatgcataatgtatgcaaggttcggggttcaaactccagccaccac 50037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 53633679 - 53633639
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||  ||||||||||| |||||||||||||||||    
T  53633679 cgtgagcttaactcagttggtaaggataatgcataatatat 53633639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 30370212 - 30370172
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30370212 cgtgagcttagttcagttggtaaagataatgcataatatat 30370172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 28046242 - 28046200
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  28046242 tccgtgagcttagttcagttgataaagacaatgcataatatat 28046200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 788865 - 788945
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||  ||||||||||| || ||||||||||||||  || |||||| |||||||||||   ||||||| ||||||    
T  788865 cgtgagcttatctcagttggtaaggacaatgcataatatatgcaaggttcggagttcaaaccccgaccaccacacaaaaaa 788945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 4826289 - 4826369
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||| ||||||||| |||||| ||| |||||||||||||| ||| |||||  |||||||| || | ||||||| ||||||    
T  4826289 cgtgaacttagttcaattggtagagacaatgcataatatatgtaaggttcgaggttcaaactccggccaccacaaaaaaaa 4826369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 8211660 - 8211601
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaa 174  Q
    ||||||| ||| ||||||||||  |||||||||||||||||| || |||||| |||||||    
T  8211660 cgtgagcatagctcagttggtatggataatgcataatatatacaaagttcggggttcaaa 8211601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 4450259 - 4450301
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||    
T  4450259 tccgtgagcttagctcagttgataaagacaatgcataatatat 4450301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 15062296 - 15062370
Alignment:
Q  121 cttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||||||||  | ||||||||| |||| ||| |||||| |||| |||| | ||||||||| ||||||    
T  15062296 cttagttcagttggtaagtacaatgcataaaatatgtaaggttcggggttcgaaccgcggacaccacaaaaaaaa 15062370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 1146566 - 1146509
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaa 174  Q
    ||||||||  |||||||||  ||| ||||||||| |||||||| ||||||||||||||    
T  1146566 tgagcttaagtcagttggttgagacaatgcataaaatatataaggttcggtgttcaaa 1146509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 8381257 - 8381176
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||  |||||||||||||| ||||||||| ||||  || || | | |||| ||||||||| |||||| ||||||    
T  8381257 ccgtgagcttaactcagttggtaaagacaatgcataacatatgcaaggtccagggttcgaaccccagataccacaaaaaaaa 8381176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 11713664 - 11713709
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataa 159  Q
    |||||||||||  ||| ||||||| |||||||||||||||||||||    
T  11713664 ccgtgagcttaaatcaattggtaaggataatgcataatatatataa 11713709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 26556426 - 26556389
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataata 152  Q
    ||||||||||||||||||| || |||||||||||||||    
T  26556426 cgtgagcttagttcagttgatatagataatgcataata 26556389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 28592749 - 28592676
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccaca 188  Q
    ||||||||||||||| |||| ||||| |||||||||||||| ||| ||  || |||| |||| | |||||||||    
T  28592749 cgtgagcttagttcaattggcaaagacaatgcataatatatgtaaggtctggggttcgaacctcggacaccaca 28592676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 34845581 - 34845614
Alignment:
Q  123 tagttcagttggtaaagataatgcataatatata 156  Q
    |||||||||||||||||| |||||||||||||||    
T  34845581 tagttcagttggtaaagacaatgcataatatata 34845614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 404162 - 404234
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||  | ||||||||| || ||||||||||||||  ||||| ||  |||| |||||||||||||||    
T  404162 cgtgagcttaacttagttggtaaggacaatgcataatatatgcaatgtccgaggttcgaaccccagacaccac 404234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 5040895 - 5040835
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    ||||||||||| |||||||||||||| ||  ||||||||||  || || ||||||||||||    
T  5040895 cgtgagcttagctcagttggtaaagacaaaacataatatatgcaaggtccggtgttcaaac 5040835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 8810639 - 8810679
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||||||| ||| ||||||||||    
T  8810639 cgtgagcttagctcagttggtaaagacaatacataatatat 8810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 10018399 - 10018458
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    |||||| |||| ||||||||||  ||||||||||||||||| ||| |||||| ||||||||    
T  10018399 cgtgagtttagctcagttggtag-gataatgcataatatatgtaaggttcggggttcaaac 10018458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 24438332 - 24438284
Alignment:
Q  127 tcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    |||||||||||  |||||||||||||||| ||| |||||| ||||||||    
T  24438332 tcagttggtaagaataatgcataatatatgtaaagttcggggttcaaac 24438284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 26522472 - 26522512
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    |||||||||| ||||||||||| || |||||||||||||||    
T  26522472 gtgagcttagctcagttggtaaggacaatgcataatatata 26522512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 39973213 - 39973150
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    ||||||||||| |||||| ||  |||||||||||||||||| |||||||||||||| |||||||    
T  39973213 cgtgagcttagctcagttagttcagataatgcataatatatgtaatgttcggtgtttaaacccc 39973150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 2587762 - 2587683
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| ||| ||||||  ||||||||||||||||| ||| || ||| ||||||||||||| ||||||| ||||||    
T  2587762 cgtgagcttagctcaattggtatggataatgcataatatatgtaaggtccgg-gttcaaaccccagccaccacaaaaaaaa 2587683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 6087747 - 6087817
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacacca 186  Q
    |||||||||| |||||||||| ||||||||||||||||||  || ||  || ||||||||||||| |||||    
T  6087747 gtgagcttagctcagttggtatagataatgcataatatatgcaaggtctggggttcaaaccccagccacca 6087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 10337046 - 10336968
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||  |||||||| ||||| |||||||||| ||| ||| |||||| |||||||||||  |||||||| ||||||    
T  10337046 tgagcttaactcagttggcaaagacaatgcataatgtatgtaaggttcggggttcaaaccccgaacaccacaaaaaaaa 10336968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 7230279 - 7230359
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| ||||||||||| || ||||||||||||||  || || ||| ||||||||| | | ||||||| ||||||    
T  7230279 cgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaacctcggccaccacaaaaaaaa 7230359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 23809948 - 23810028
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| ||||||||||  || || |||||||||||  || |||| | ||||||||||| | ||||||||||||||    
T  23809948 cgtgagcttagctcagttggtatggacaaagcataatatatgcaaggttcagggttcaaaccccggccaccacagaaaaaa 23810028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 26315765 - 26315845
Alignment:
Q  118 gagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaagag 198  Q
    |||||||||||| ||   || |||||||||||||||||| || ||||| ||||| ||||| |||||||||  |||||||||    
T  26315765 gagcttagttcaatttaaaaggataatgcataatatatacaaggttcgatgttcgaaccctagacaccacctaaaaaagag 26315845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 32006499 - 32006559
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    |||||| |||| ||||||||||  ||||||||||||||||| ||| |||||| ||||||||    
T  32006499 cgtgagtttagctcagttggtagggataatgcataatatatgtaaagttcggggttcaaac 32006559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 34595986 - 34595926
Alignment:
Q  127 tcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||| || |||||||||||||| ||| |||||| |||  |||||||||||||||    
T  34595986 tcagttggtaaggacaatgcataatatatgtaaagttcggggtttgaaccccagacaccac 34595926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 43179172 - 43179212
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  43179172 cgtgagcttagttcagttggtaaggaaaatgcataatatat 43179212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 49473644 - 49473724
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||  |||||||||| || ||||||||||||||  || || ||| |||| |||||||| ||||||| ||||||    
T  49473644 cgtgagcttagcccagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccccagtcaccacaaaaaaaa 49473724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 54500568 - 54500628
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    ||||||||||| |||||||||| ||| |||||||||||||| ||| || ||| ||||||||    
T  54500568 cgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttcaaac 54500628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 20383488 - 20383567
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||| ||||||||||  || ||||||||||||||  || || ||| ||||||||||||  ||||||| ||||||    
T  20383488 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccatccaccacaaaaaaaa 20383567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 28435309 - 28435238
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||| |||| ||||||||||  || ||||||||||||||  || |||||| ||||||||||||| ||||||    
T  28435309 gtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaaccccagccaccac 28435238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 36071144 - 36071223
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||| |||| ||||||||||| || |||||||||||||| ||| |||||| |||| ||| || | ||||||| ||||||    
T  36071144 gtgagtttaggtcagttggtaaggacaatgcataatatatgtaaggttcggggttcgaacgccgggcaccacaaaaaaaa 36071223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 38416057 - 38416096
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  38416057 gtgagcttagctcagttggtaaggataatgcataatatat 38416096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 11286841 - 11286803
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  11286841 tgagcttagttcagttggtagagacaatgcataatatat 11286803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 14136090 - 14136132
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatat 157  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||    
T  14136090 cgtgagcttagctcagttgataaagacaatgcataatatatat 14136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 25999394 - 25999456
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    ||||||| ||||| ||||||||||  || |||||||||||||||||| |||| | ||||||||    
T  25999394 tccgtgaacttagctcagttggtagggacaatgcataatatatataaggttccgagttcaaac 25999456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 46676558 - 46676488
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||| ||||||||||| || ||||||||||||||  || || ||| |||| | |||||||||||||    
T  46676558 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgacccccagacaccac 46676488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 53142607 - 53142645
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  53142607 tgagcttagttcagttgctatagataatgcataatatat 53142645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 2539362 - 2539285
Alignment:
Q  118 gagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||| ||||||||||| || || |||| ||||||  ||||||||  |||| |||||| ||||||||| ||||||    
T  2539362 gagcttagctcagttggtaatgacaacgcatgatatatgcaatgttcgaggttcgaaccccggacaccacaaaaaaaa 2539285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 10006338 - 10006379
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||| |||||||||| ||||||||||||||    
T  10006338 ccgtgagcttaggtcatttggtaaagacaatgcataatatat 10006379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 21432616 - 21432657
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    |||||||||||||||||||||| ||||| |||||| ||||||    
T  21432616 cgtgagcttagttcagttggtagagatattgcatattatata 21432657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 7282557 - 7282621
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccag 180  Q
    |||| ||||| ||||||||||   | ||||||||||||||  || ||||||||||||||||||||    
T  7282557 gtgaacttagctcagttggtatgaacaatgcataatatattaaaggttcggtgttcaaaccccag 7282621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 7922312 - 7922272
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||  |||||||||||||| ||||||||||||||    
T  7922312 cgtgagcttatctcagttggtaaagacaatgcataatatat 7922272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 8027459 - 8027419
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||| |||| ||||||||||| |||||||||||||||||    
T  8027459 cgtgagtttagctcagttggtaaggataatgcataatatat 8027419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 21317400 - 21317360
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  21317400 cgtgagcttagctcagttggtagagacaatgcataatatat 21317360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 37208039 - 37208079
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||| |||||||||| ||| ||||||||||    
T  37208039 cgtgagcttagttcaattggtaaagacaatacataatatat 37208079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 38939596 - 38939516
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||| || |||| || ||| ||||||||||||||||||||| ||  || ||||||| | ||| ||||| ||||||||    
T  38939596 cgtgagctaagctcagctgataaggataatgcataatatatataaggtctggggttcaaatctcagtcaccatagaaaaaa 38939516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 44909835 - 44909903
Alignment:
Q  127 tcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||||| |||||||| |||||  || |||| | ||||||||| ||| ||||||| ||||||    
T  44909835 tcagttggtaaagacaatgcatagtatatgcaaagttcagggttcaaacctcagccaccacaaaaaaaa 44909903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 52869072 - 52869008
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataa-tgcataatatatataatgttcggtgttcaaacccc 178  Q
    ||||||||||| |||||||||| ||| || ||||||||||||| || || ||| |||||||||||    
T  52869072 cgtgagcttagctcagttggtagagacaaatgcataatatatacaaggtccggagttcaaacccc 52869008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 20120782 - 20120703
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||| ||||||||||| || ||||||||||||||  || |||||| ||||||| ||| ||||||||| ||||||    
T  20120782 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcaaatcccggacaccacaaaaaaaa 20120703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 2429013 - 2429067
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggt 167  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||| |||||||    
T  2429013 tccgtgagcttagttcagttggtaaggacaatgcataatatatgtaaggttcggt 2429067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 44488071 - 44488011
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacc 176  Q
    ||||| |||||||||||||||| || |||||||||||||| ||| |||||| |||||||||    
T  44488071 gtgagtttagttcagttggtaaggacaatgcataatatatgtaaggttcggagttcaaacc 44488011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 13000685 - 13000724
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  13000685 gtgagcttagctcagttggtaaagataatgcataatatat 13000724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 30243249 - 30243310
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacc 176  Q
    ||||| ||||| |||||||||| ||| ||||||||||||||| || |||||| |||||||||    
T  30243249 cgtgaacttagctcagttggtagagacaatgcataatatatacaaggttcggggttcaaacc 30243310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 2783006 - 2783046
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  2783006 cgtgagcttagttcagttggtagagataatgtataatatat 2783046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 20565137 - 20565057
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| ||||||||||  || ||||||||||||||  || || ||| ||||||||||||  ||||||| ||||||    
T  20565137 cgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccaaccaccacaaaaaaaa 20565057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 22608526 - 22608606
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| |||||||||| ||| ||||||||||||||  || ||  |  |||||||||||||||| |||| ||||||    
T  22608526 cgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtatgaggttcaaaccccagacaacacaaaaaaaa 22608606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 31543011 - 31543091
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| |||| |||||  |||||||||||||||||  || || ||| ||||||||||||  ||||||| ||||||    
T  31543011 cgtgagcttagctcagatggtatggataatgcataatatatgcaaggtccggggttcaaaccccaaccaccacaaaaaaaa 31543091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 40546315 - 40546383
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagaca 183  Q
    ||||||||||| ||||||  |||  | ||||||||||||||  |||||||| |||||||||||||||||    
T  40546315 cgtgagcttagctcagttaataagaacaatgcataatatatgcaatgttcgatgttcaaaccccagaca 40546383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 7413253 - 7413210
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    ||||||||||||| ||||||||||| || |||||||||||||||    
T  7413253 tccgtgagcttagctcagttggtaaggacaatgcataatatata 7413210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 36264540 - 36264461
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||| |||| ||||||  |||||||||||||||||  || |||||| |||||||||||   ||||||| ||||||    
T  36264540 gtgagcttaattcaattggtatggataatgcataatatatgcaaagttcggggttcaaaccccgaccaccacaaaaaaaa 36264461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 9459120 - 9459078
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    |||||||||||| ||||||| |||||| |||||||||||||||    
T  9459120 ccgtgagcttagctcagttgataaagacaatgcataatatata 9459078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 24593373 - 24593415
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||| ||||||||||| || ||||||||||||||    
T  24593373 tccgtgagcttagctcagttggtaaggacaatgcataatatat 24593415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 10156015 - 10156072
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttc 171  Q
    |||||||||||| ||||||||||| || ||| ||||||||||  || |||||||||||    
T  10156015 ccgtgagcttagctcagttggtaaggacaatacataatatatgcaaggttcggtgttc 10156072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 12124682 - 12124763
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||| ||||||| ||||||||||| || ||||||||||||||  || || ||| |||| |||| || |||||||| ||||||    
T  12124682 ccgtcagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggagttcgaacctcaaacaccacaaaaaaaa 12124763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 15654932 - 15654891
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||| |||||||||||| ||||    
T  15654932 ccgtgagcttagctcagttggtaaggataatgcataaaatat 15654891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 18231536 - 18231495
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||| || ||||||||||||||    
T  18231536 ccgtgagcttagctcagttggtaaggacaatgcataatatat 18231495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 19179113 - 19179072
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||| || ||||||||||||||    
T  19179113 ccgtgagcttagctcagttggtaaggacaatgcataatatat 19179072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 35456883 - 35456802
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcat-aatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| |||||||||||  | ||||||| |||||||  || |||||| ||||||||||||  ||||||| ||||||    
T  35456883 cgtgagcttagctcagttggtaagaacaatgcattaatatatgcaaggttcggggttcaaaccccaaccaccacaaaaaaaa 35456802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 40896571 - 40896530
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    ||||||||||| |||||||||| ||| |||||||||||||||    
T  40896571 cgtgagcttagctcagttggtatagacaatgcataatatata 40896530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 2434972 - 2434932
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||||||||||| || || ||||||||||||||    
T  2434972 cgtgagcttagttcagttgggaaggacaatgcataatatat 2434932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 7206124 - 7206164
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  7206124 cgtgagcttagctcagttggtagagacaatgcataatatat 7206164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 16385419 - 16385459
Alignment:
Q  122 ttagttcagttggtaaagataatgcataatatatataatgt 162  Q
    |||||| |||||||||||| |||||||||||||| ||||||    
T  16385419 ttagttaagttggtaaagacaatgcataatatatgtaatgt 16385459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 22571927 - 22571847
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||| ||||| ||||||| || ||| ||||||||||||||  ||||| ||| ||||||| | ||| ||||||| ||||||    
T  22571927 cgtgaacttagctcagttgatatagacaatgcataatatatgcaatgtccggggttcaaatctcagccaccacaaaaaaaa 22571847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 25186304 - 25186224
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||| |||| ||||||| ||  || ||||||||||||||  || || ||| ||||||||||||| ||||||| ||||||    
T  25186304 cgtgagtttagctcagttgatatggacaatgcataatatatgcaaggtccggggttcaaaccccagccaccacaaaaaaaa 25186224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 26999109 - 26999149
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||| |||||||||||||||| ||| ||||||||||||||    
T  26999109 cgtgaacttagttcagttggtagagacaatgcataatatat 26999149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 27412898 - 27412818
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||  |||||||||| ||| |||||||||||||| ||| ||  | ||||||||||||   ||||||| ||||||    
T  27412898 cgtgagcttaactcagttggtagagacaatgcataatatatgtaaggtctgttgttcaaaccccgaccaccacaaaaaaaa 27412818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 33117466 - 33117386
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataata-tatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||| |||||| |||   ||||||||||||| ||||||| || ||| |||||||||||||  |||||| ||||||    
T  33117466 gtgagcttagctcagttagtatgaataatgcataataatatataaggtccggggttcaaaccccagctaccacaaaaaaaa 33117386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 37320579 - 37320539
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||  |||||||||||||| ||||||||||||||    
T  37320579 cgtgagcttaactcagttggtaaagacaatgcataatatat 37320539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 13401597 - 13401659
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    |||||||||||||||||| || ||| |||||||||||||| ||| |||||| |||||||||||    
T  13401597 gtgagcttagttcagttgatagagacaatgcataatatatgtaaggttcggggttcaaacccc 13401659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 32826763 - 32826718
Alignment:
Q  119 agcttagttcagttggtaaagataatgcataatatatataatgttc 164  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||    
T  32826763 agcttagttcagttggtaaaaataatgcataatatatgtaaggttc 32826718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 19262969 - 19262897
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||| ||||||| ||| || ||||||||| ||||  || |||||| |||| |||||||||||||||    
T  19262969 cgtgagcttagctcagttgataaggacaatgcataacatatgcaaagttcggggttcgaaccccagacaccac 19262897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 23592129 - 23592169
Alignment:
Q  118 gagcttagttcagttggtaaagataatgcataatatatata 158  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  23592129 gagcttagttcagttggtaaagacaatgtataatatatata 23592169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 35473951 - 35474023
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||| ||| ||||||| |||||||||||||||||  || |||| | |||| |||||| ||||||||    
T  35473951 cgtgagcttagctcaattggtaaggataatgcataatatatgcaaggttcagggttcgaaccccggacaccac 35474023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 44340882 - 44340962
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||||||||| |||  || ||||||| |||||||||| ||||||  ||||||||||   ||||||| ||||||    
T  44340882 cgtgagcttagttcagttagtatggacaatgcatgatatatataaggttcgggattcaaaccccgaccaccacaaaaaaaa 44340962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 45190331 - 45190251
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||| ||||||||||||||||  || ||||||||||||||  || ||||||  ||||||||| || ||||||| ||||||    
T  45190331 cgtgaacttagttcagttggtatggacaatgcataatatatgcaaggttcgggattcaaaccctagccaccacaaaaaaaa 45190251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 25532972 - 25533035
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    ||||||||||||||||||||||  || ||||||||||||||  || || ||| |||||||||||    
T  25532972 cgtgagcttagttcagttggtatggacaatgcataatatatgcaaggtccggggttcaaacccc 25533035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 27533242 - 27533305
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    ||||||||||| ||||||||||  || ||||||||||||||  || |||||| |||||||||||    
T  27533242 cgtgagcttagatcagttggtagggacaatgcataatatatgcaaggttcggggttcaaacccc 27533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 34595868 - 34595951
Alignment:
Q  113 tccgtgagcttagttcagttg-gtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||||||||||||  ||| |||||||||||||||||  || || ||| ||||||||| | | ||||||| ||||||    
T  34595868 tccgtgagcttagttcagttgactaaggataatgcataatatatgcaaggtccggggttcaaacctcggccaccacaaaaaaaa 34595951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 37383853 - 37383802
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcgg 166  Q
    |||||||||||||||||||||   ||||||||||||||||| ||| ||||||    
T  37383853 cgtgagcttagttcagttggtttggataatgcataatatatctaaggttcgg 37383802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 47719169 - 47719086
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaagag 198  Q
    ||||||||||  ||||||||||| |||||||||||||||||  || |||||| |||| || ||| | ||||||  |||||||||    
T  47719169 cgtgagcttaactcagttggtaaggataatgcataatatatgcaaggttcggagttcgaatcccggccaccaccaaaaaaagag 47719086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 8210445 - 8210367
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| ||||||||| || ||||||||||||||| || || | | |||| |||||| | ||||||| ||||||    
T  8210445 tgagcttagtttagttggtaaggacaatgcataatatatacaaggtccagggttcgaaccccggccaccacaaaaaaaa 8210367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 26861179 - 26861114
Alignment:
Q  122 ttagttcagttggtaaagataatgcataatatatataatgttcg-gtgttcaaaccccagacaccac 187  Q
    ||||||||||||||| ||| |||||||||||||||||| | ||| |||||| ||| |||||||||||    
T  26861179 ttagttcagttggtagagacaatgcataatatatataa-gatcgagtgttcgaactccagacaccac 26861114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 29059465 - 29059423
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataa 159  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  29059465 tgagcttaattcagttggtaagaataatgcataatatatataa 29059423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 45761390 - 45761432
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatata 158  Q
    |||||||||||||| ||| |||||||| |||||||||||||||    
T  45761390 gtgagcttagttcaattgataaagatattgcataatatatata 45761432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 50263381 - 50263419
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  50263381 tgagcttagctcagttggtaacgataatgcataatatat 50263419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 5907797 - 5907870
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    |||||||||||| |||||||| || || ||||||||||||||  || || | | ||||||||||| ||||||||    
T  5907797 ccgtgagcttagctcagttggcaaggacaatgcataatatatgcaaggtccagggttcaaaccccggacaccac 5907870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 6094421 - 6094486
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccag 180  Q
    ||||||||||  ||||||||||  ||||||| ||||||||| ||| |||  |||||||||||||||    
T  6094421 cgtgagcttaactcagttggtatggataatgtataatatatgtaaagttttgtgttcaaaccccag 6094486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 7925363 - 7925423
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacc 176  Q
    ||||||||||| |||||||||| ||| ||||||||||||||  || |||||| |||||||||    
T  7925363 cgtgagcttagctcagttggtagagacaatgcataatatat-gaaggttcggggttcaaacc 7925423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 15803300 - 15803259
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||||||||| || || ||||||||||||||    
T  15803300 ccgtgagcttagttcagttggcaaggacaatgcataatatat 15803259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 17283949 - 17283990
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||| || ||||||||||||||    
T  17283949 ccgtgagcttagctcagttggtaaggacaatgcataatatat 17283990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 23228559 - 23228518
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatata 154  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  23228559 tccgtgagcttagctcagttggtaaggacaatgcataatata 23228518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 23309463 - 23309500
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataata 152  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  23309463 cgtgagcttagttcagttggtatagacaatgcataata 23309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 38448929 - 38448888
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||| || ||||||||||||||    
T  38448929 ccgtgagcttagctcagttggtaaggacaatgcataatatat 38448888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 9413797 - 9413853
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttc 171  Q
    |||||| ||||||||||||||||  | |||||||||||||| ||| |||||| ||||    
T  9413797 cgtgagtttagttcagttggtaagaacaatgcataatatatgtaaggttcggggttc 9413853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 9872167 - 9872127
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||| ||| ||||||||||| |||||||||||||||||    
T  9872167 cgtgagcatagctcagttggtaaggataatgcataatatat 9872127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 13794570 - 13794530
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||| ||| |||||||||||||||||    
T  13794570 cgtgagcttagctcagttgataaggataatgcataatatat 13794530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 34733399 - 34733439
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  34733399 cgtgagcttagctcagttggtaaggacaatgcataatatat 34733439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 35337173 - 35337141
Alignment:
Q  127 tcagttggtaaagataatgcataatatatataa 159  Q
    |||||||||| ||||||||||||||||||||||    
T  35337173 tcagttggtatagataatgcataatatatataa 35337141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 36371102 - 36371062
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  36371102 cgtgagcttagctcagttggtagagacaatgcataatatat 36371062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 40618921 - 40618949
Alignment:
Q  127 tcagttggtaaagataatgcataatatat 155  Q
    |||||||||||||||||||||||||||||    
T  40618921 tcagttggtaaagataatgcataatatat 40618949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 41763217 - 41763137
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| ||||||||||  |||||||||||| ||||  || || ||| ||||||||||| | ||| ||| ||||||    
T  41763217 cgtgagcttagctcagttggtagggataatgcataaaatatgcaaggtccggggttcaaaccccggccacaacaaaaaaaa 41763137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 44068855 - 44068935
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||  | |||||||| ||||||||||||||| || ||||||| |  |||| || ||| ||||||||| ||||||    
T  44068855 cgtgagcttaacttagttggtagagataatgcataatacatttaatgtttgaggttcgaatcccggacaccacaaaaaaaa 44068935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 47528510 - 47528470
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatata 154  Q
    |||||||||||| ||||||||||| || |||||||||||||    
T  47528510 ccgtgagcttagctcagttggtaaggacaatgcataatata 47528470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 50250356 - 50250300
Alignment:
Q  121 cttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccc 177  Q
    |||||||||||||||| ||| ||||||||| ||||| || |||| | ||||||||||    
T  50250356 cttagttcagttggtatagacaatgcataaaatatacaaggttcagggttcaaaccc 50250300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 52441573 - 52441533
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  52441573 cgtgagcttagctcagttggtatagacaatgcataatatat 52441533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 3650519 - 3650599
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||  |||||||||| | | |||||||||||||| ||| |||||| ||||||||||| | ||||||| ||||||    
T  3650519 cgtgagcttaactcagttggtagaaaaaatgcataatatatgtaaggttcggggttcaaaccccggccaccacaaaaaaaa 3650599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 1244769 - 1244687
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||| ||||| ||||||||||| || ||||||||||||||| || ||  || |||| |||||| ||||||||| ||||||    
T  1244769 tccgtgaacttagctcagttggtaaggacaatgcataatatatacaaggtctggggttcgaaccccggacaccacaaaaaaaa 1244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 42641710 - 42641665
Alignment:
Q  129 agttggtaaagataatgcataatatatataatgttcggtgttcaaa 174  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  42641710 agttgataaaaataatgcataatatatataatgttcggagttcaaa 42641665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 1200407 - 1200367
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  1200407 cgtgagcatagttcggttggtaaagataatgcataatatat 1200367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 12249547 - 12249487
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    ||||||||||  ||| ||||||||||||||| |||||||||  || |||||||||||||||    
T  12249547 cgtgagcttaactcaattggtaaagataatgtataatatatgcaaggttcggtgttcaaac 12249487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 20469373 - 20469301
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||| |||||||||| | | ||||||||||||||  || |||||| |||| |||||||| ||||||    
T  20469373 cgtgagcttagatcagttggtataaacaatgcataatatatgcaaggttcggagttcgaaccccagccaccac 20469301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 23816789 - 23816829
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  23816789 cgtgagcttagctcagttggtaaggataatgcataatatat 23816829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 28439958 - 28440021
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    |||||| ||| |||||||| ||||||||||||||||||||| ||| ||  || |||||||||||    
T  28439958 cgtgagtttaattcagttgataaagataatgcataatatatgtaaggtctggggttcaaacccc 28440021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 41535322 - 41535381
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaa 174  Q
    ||||| |||||||||| ||||||  | |||||||||||||||||| |||||| |||||||    
T  41535322 cgtgaacttagttcagctggtaacaacaatgcataatatatataaggttcggagttcaaa 41535381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 19778063 - 19778104
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||| || ||||||||||||||    
T  19778063 ccgtgagcttagctcagttggtaaggacaatgcataatatat 19778104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 40167324 - 40167401
Alignment:
Q  118 gagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||  ||||||||||  || ||||||||||||||| || ||||||  |||||||||| | ||||||| ||||||    
T  40167324 gagcttaactcagttggtatggacaatgcataatatatacaaggttcgggattcaaaccccggccaccacaaaaaaaa 40167401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 44632220 - 44632167
Alignment:
Q  142 aatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||||||||||||||| |||||| |||||||||||   ||||||| ||||||    
T  44632220 aatgcataatatatataaggttcggggttcaaaccccgaccaccacaaaaaaaa 44632167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 3889888 - 3889932
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatata 158  Q
    |||||| ||||| | |||||||||||| |||||||||||||||||    
T  3889888 ccgtgaacttagcttagttggtaaagacaatgcataatatatata 3889932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 5179804 - 5179852
Alignment:
Q  127 tcagttggtaaagataatgcataatatatataatgttcggtgttcaaac 175  Q
    ||||||||||| || ||||||||||||||| || |||||| ||||||||    
T  5179804 tcagttggtaaggacaatgcataatatatacaaggttcggggttcaaac 5179852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 13286130 - 13286170
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  13286130 cgtgagcttagctcagttggtatagacaatgcataatatat 13286170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 17704012 - 17704052
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  17704012 cgtgagcttagctcagttggtaaggacaatgcataatatat 17704052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 27587220 - 27587292
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||| ||||||||||| || ||||||| ||||||  || || ||| ||||||||||| | ||||||    
T  27587220 cgtgagcttagctcagttggtaaggacaatgcatgatatatgcaaggtccggggttcaaaccccggccaccac 27587292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 32223941 - 32223901
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||||||||| || ||| ||||||||||||||    
T  32223941 cgtgagcttagttcagttgatagagacaatgcataatatat 32223901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 33451411 - 33451371
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  33451411 cgtgagcttagctcagttggtatggataatgcataatatat 33451371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 37015898 - 37015858
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  37015898 cgtgagcttagctcagttggtagagacaatgcataatatat 37015858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 44293574 - 44293614
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  44293574 cgtgagcttagctcagttggtatagacaatgcataatatat 44293614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 39926600 - 39926520
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| ||||||| ||| || ||||||||||||||  ||||||||| ||||||||| || |||||| | ||||||    
T  39926600 cgtgagcttagctcagttgataaggacaatgcataatatatgcaatgttcggggttcaaacctcaaacaccataaaaaaaa 39926520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 1120093 - 1120022
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacacca 186  Q
    ||||||||||| ||||||||| | || ||| |||||||||| ||| ||| ||||||| ||||||||||||||    
T  1120093 cgtgagcttagctcagttggtgaggacaatacataatatatgtaaagtttggtgttcgaaccccagacacca 1120022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 20103518 - 20103444
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||||  ||||||||||| || |||||||||||| || || || ||| |||| |||||||||||||||    
T  20103518 tccgtgagcttaactcagttggtaaggacaatgcataatatttacaaggtccggggttcgaaccccagacaccac 20103444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 34000259 - 34000341
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||||  ||||||| ||| ||||||||||||||||| ||| |||||| |||||||  || | ||||||| ||||||    
T  34000259 tccgtgagcttaactcagttgataaggataatgcataatatatgtaaggttcggggttcaaataccggccaccacaaaaaaaa 34000341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 2962789 - 2962748
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  2962789 ccgtgaacttagttcaattggtaaagataatgcataatatat 2962748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 25251507 - 25251572
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    ||||||||||||  |||||||||| | | |||||||||||||||||| ||| || |||||||||||    
T  25251507 tccgtgagcttaactcagttggtataaacaatgcataatatatataaggtttggggttcaaacccc 25251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 22690098 - 22690018
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||| ||||||| |||  ||||||||||||||||  || ||| || |||| |||||| ||||||||| ||||||    
T  22690098 cgtgagcttagctcagttgctaagaataatgcataatatatgcaaggtttggggttcgaaccccggacaccacaaaaaaaa 22690018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 26914666 - 26914730
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccca 179  Q
    ||||| |||| ||||||||||  ||||||||||||| |||| ||| ||| |||||||||||||||    
T  26914666 cgtgaacttaattcagttggttgagataatgcataaaatatgtaaagtttggtgttcaaacccca 26914730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 5526724 - 5526787
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    ||||||||||| ||||||||||  || ||||||||||||||||||  || || |||||||||||    
T  5526724 cgtgagcttagctcagttggtatggacaatgcataatatatataagatttggggttcaaacccc 5526787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 8237694 - 8237631
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaacccc 178  Q
    |||||||||||||| |||||||| || ||||||||||||||| || || ||  |||||||||||    
T  8237694 cgtgagcttagttctgttggtaaggacaatgcataatatatacaaagtccgaggttcaaacccc 8237631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 18714451 - 18714530
Alignment:
Q  119 agcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaagag 198  Q
    ||||||| ||||||||||| || ||||||||||||||  || || ||| |||||||||||  |||||||  |||||||||    
T  18714451 agcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaaccccgtacaccaccaaaaaaagag 18714530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 46987086 - 46987157
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    |||||||||| ||||||||||| || ||||||||||||||  || || ||| |||| |||||| ||||||||    
T  46987086 gtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccccggacaccac 46987157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 1398459 - 1398417
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatat 157  Q
    ||||||||||| ||||||||||| || ||||||||||||||||    
T  1398459 cgtgagcttagctcagttggtaaggacaatgcataatatatat 1398417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 27833451 - 27833381
Alignment:
Q  127 tcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaaga 197  Q
    ||||||||||| || |||||||||||||| ||| || ||| |||||||||||   |||||| |||||||||    
T  27833451 tcagttggtaaggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccaccgaaaaaaga 27833381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 34607048 - 34607010
Alignment:
Q  116 gtgagcttagttcagttggtaaagataatgcataatata 154  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  34607048 gtgagcttatctcagttggtaaagataatgcataatata 34607010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 5833040 - 5833081
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||  |||||||||||||||||    
T  5833040 ccgtgagcttagctcagttggtagggataatgcataatatat 5833081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 20455135 - 20455204
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacac 184  Q
    |||||||||||||||||||||  ||| ||||||||||||||  || |||| |  |||||||||| |||||    
T  20455135 cgtgagcttagttcagttggtttagacaatgcataatatattcaaggttcaggattcaaaccccggacac 20455204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 26816727 - 26816686
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||| ||||||||||  |||||||||||||||||    
T  26816727 ccgtgagcttagctcagttggtagggataatgcataatatat 26816686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 29166339 - 29166298
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatata 156  Q
    |||||||||||||||||||||||| | ||||||||| |||||    
T  29166339 cgtgagcttagttcagttggtaaaaacaatgcataaaatata 29166298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 38858235 - 38858194
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    |||||||||||||||| |||||||||| | ||||||||||||    
T  38858235 ccgtgagcttagttcaattggtaaagacagtgcataatatat 38858194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 5584646 - 5584686
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||| |||||||||||||| ||||||||||    
T  5584646 cgtgagcttagctcaattggtaaagataatacataatatat 5584686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 5589606 - 5589646
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| ||| |||||||||||||| ||||||||||    
T  5589606 cgtgagcttagctcaattggtaaagataatacataatatat 5589646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 8683069 - 8683109
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  8683069 cgtgagcttagctcagttggtatagacaatgcataatatat 8683109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 16537598 - 16537518
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||| |||| ||||||||||  |||||||||||||||||| || ||  || ||||||||| | | ||||||| ||||||    
T  16537598 cgtgagtttagctcagttggtagggataatgcataatatatacaaggtctggggttcaaacctcggtcaccacaaaaaaaa 16537518  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 16628064 - 16628144
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    |||||| |||| ||||||||||  |||||||||||||||||| || ||  || ||||||||| | | ||||||| ||||||    
T  16628064 cgtgagtttagctcagttggtagggataatgcataatatatacaaggtctggggttcaaacctcggtcaccacaaaaaaaa 16628144  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 21164820 - 21164776
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataa 159  Q
    ||||||||||  ||||||||||  |||||||||||||||||||||    
T  21164820 cgtgagcttaactcagttggtatggataatgcataatatatataa 21164776  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 25155545 - 25155577
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcata 149  Q
    |||||||||||||||||| ||||||||||||||    
T  25155545 tgagcttagttcagttggcaaagataatgcata 25155577  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 27462498 - 27462418
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||| ||| ||||||||||  || ||||||||||||||  || || ||| ||||||||||| | ||||||| ||||||    
T  27462498 cgtgagcatagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccaccacaaaaaaaa 27462418  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 35666302 - 35666382
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaa 195  Q
    ||||||||||  || |||||||| || |||||||||||||| ||||||  || ||||||| || ||||| |||| ||||||    
T  35666302 cgtgagcttaactcggttggtaaggacaatgcataatatatgtaatgtctggggttcaaatcctagacatcacaaaaaaaa 35666382  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 36803837 - 36803877
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  36803837 cgtgagcttagctcagttggtagagacaatgcataatatat 36803877  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 361310 - 361248
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccc 177  Q
    ||||||||||||||||||||||  |||||||||||| |||| | | |||||| ||||||||||    
T  361310 cgtgagcttagttcagttggtatggataatgcataaaatatgttaggttcggggttcaaaccc 361248  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 25387 - 25470
Alignment:
Q  114 ccgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccacagaaaaaaga 197  Q
    |||||||||||  ||||||||||| || ||||||||||||||  || || | | |||| |||||||||||||||  ||||||||    
T  25387 ccgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaaccccagacaccaccaaaaaaaga 25470  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 91626 - 91584
Alignment:
Q  113 tccgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||    
T  91626 tccgtgagcttagctcagttgttaaggataatgcataatatat 91584  T

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Target: scaffold0896 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 3140 - 3180
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatat 155  Q
    ||||||||||| |||||||||||||| ||| ||||||||||    
T  3140 cgtgagcttagctcagttggtaaagacaatacataatatat 3180  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 61632 - 61560
Alignment:
Q  115 cgtgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccccagacaccac 187  Q
    ||||||||||  ||||||||||| ||||||||||||| ||| ||| || | | ||||||||||| | ||||||    
T  61632 cgtgagcttaactcagttggtaaggataatgcataatgtatgtaaggtccagggttcaaaccccggccaccac 61560  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 190032 - 189972
Alignment:
Q  117 tgagcttagttcagttggtaaagataatgcataatatatataatgttcggtgttcaaaccc 177  Q
    |||| |||| ||||||| | |||| |||||||||||||| ||| |||||| ||||||||||    
T  190032 tgagtttagctcagttgttgaagacaatgcataatatatgtaaggttcggggttcaaaccc 189972  T

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