View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5853_high_34 (Length: 242)
Name: NF5853_high_34
Description: NF5853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5853_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22053667 - 22053893
Alignment:
| Q |
1 |
aattgtgcgtagccaaaggatccatacattattgcactagataaggttcaatttacgaatgatgacataaatcactaacatataacatatactaactaca |
100 |
Q |
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| T |
22053667 |
aattgtgcgtaaccaatggatccatacattattgcactagataaggttcaatttacgaatgatgacataaatcactaacatataacatatactaactaca |
22053766 |
T |
|
| Q |
101 |
aaaatgggccgttttaccgctaaatctctcttaaggtacattattcagaaaagtataaccataacctatgtcattgttaaacatgaaaaagagtactact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
22053767 |
aaaatgggccgttttaccgctaaatctctcttaaggtacattattcagaaaagtataaccataacctatgtcattgttaaacatgaaaaagagtactgct |
22053866 |
T |
|
| Q |
201 |
cctcactaccctctgaactcaaactta |
227 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
22053867 |
cctcactaccctctgaactcaaactta |
22053893 |
T |
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