View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5853_low_32 (Length: 247)

Name: NF5853_low_32
Description: NF5853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5853_low_32
NF5853_low_32
[»] chr5 (51 HSPs)
chr5 (14-247)||(10593290-10593534)
chr5 (14-247)||(25078152-25078397)
chr5 (14-247)||(25136121-25136366)
chr5 (18-245)||(29720400-29720636)
chr5 (18-245)||(29722560-29722796)
chr5 (14-247)||(40382333-40382578)
chr5 (14-234)||(22536197-22536425)
chr5 (14-247)||(40380122-40380367)
chr5 (14-245)||(29751055-29751296)
chr5 (14-247)||(16546661-16546909)
chr5 (14-247)||(16544439-16544687)
chr5 (16-245)||(9789119-9789359)
chr5 (16-239)||(16409508-16409743)
chr5 (16-245)||(18441539-18441783)
chr5 (16-239)||(26177915-26178150)
chr5 (16-148)||(25412794-25412926)
chr5 (16-148)||(37439175-37439307)
chr5 (16-148)||(13343095-13343226)
chr5 (23-148)||(13239792-13239917)
chr5 (16-148)||(30182622-30182754)
chr5 (65-148)||(26170846-26170928)
chr5 (16-148)||(36074045-36074176)
chr5 (16-148)||(213499-213631)
chr5 (36-148)||(40147316-40147426)
chr5 (16-145)||(32636858-32636986)
chr5 (16-148)||(28278350-28278481)
chr5 (16-145)||(13488237-13488365)
chr5 (39-149)||(27637614-27637723)
chr5 (67-148)||(5058131-5058210)
chr5 (14-145)||(33831712-33831842)
chr5 (23-145)||(42428436-42428557)
chr5 (36-145)||(16452135-16452242)
chr5 (14-141)||(8565956-8566082)
chr5 (40-145)||(31183031-31183133)
chr5 (18-143)||(30682930-30683056)
chr5 (67-148)||(27015609-27015688)
chr5 (36-143)||(538080-538185)
chr5 (66-145)||(28750661-28750738)
chr5 (36-145)||(533824-533931)
chr5 (36-139)||(9049354-9049455)
chr5 (14-129)||(16640961-16641073)
chr5 (16-130)||(42426255-42426369)
chr5 (82-145)||(19806463-19806525)
chr5 (16-145)||(39468555-39468683)
chr5 (85-145)||(4160702-4160762)
chr5 (14-127)||(13695713-13695827)
chr5 (36-141)||(316817-316922)
chr5 (178-239)||(30182790-30182852)
chr5 (36-145)||(33906035-33906144)
chr5 (36-132)||(42309953-42310048)
chr5 (14-148)||(3075661-3075794)
[»] chr1 (57 HSPs)
chr1 (14-247)||(9036449-9036692)
chr1 (14-247)||(44203663-44203908)
chr1 (18-245)||(40282413-40282649)
chr1 (14-245)||(21053990-21054230)
chr1 (16-245)||(20622133-20622373)
chr1 (16-245)||(9987235-9987474)
chr1 (23-239)||(51765436-51765663)
chr1 (16-148)||(13316354-13316486)
chr1 (14-148)||(8550789-8550923)
chr1 (16-148)||(3189364-3189496)
chr1 (16-148)||(3198181-3198313)
chr1 (16-148)||(3207020-3207152)
chr1 (16-147)||(20762706-20762837)
chr1 (36-148)||(42297977-42298088)
chr1 (16-148)||(37168331-37168463)
chr1 (16-148)||(13547092-13547223)
chr1 (16-148)||(47255342-47255474)
chr1 (17-148)||(31925710-31925840)
chr1 (16-145)||(834173-834301)
chr1 (16-145)||(28220232-28220360)
chr1 (16-145)||(28265560-28265688)
chr1 (16-148)||(11348732-11348863)
chr1 (39-148)||(13549003-13549110)
chr1 (16-148)||(29136281-29136413)
chr1 (16-146)||(34603610-34603740)
chr1 (16-148)||(7482233-7482365)
chr1 (16-145)||(3156899-3157027)
chr1 (16-145)||(44455194-44455322)
chr1 (36-145)||(4552643-4552750)
chr1 (36-148)||(193666-193776)
chr1 (16-143)||(50169218-50169344)
chr1 (15-145)||(45644360-45644489)
chr1 (16-148)||(47115205-47115338)
chr1 (16-141)||(49918384-49918508)
chr1 (14-130)||(15820339-15820455)
chr1 (36-145)||(28223427-28223534)
chr1 (67-148)||(28242391-28242470)
chr1 (16-148)||(37033074-37033207)
chr1 (16-130)||(37503577-37503688)
chr1 (16-145)||(19754529-19754657)
chr1 (67-145)||(13659342-13659418)
chr1 (36-145)||(31659293-31659400)
chr1 (36-145)||(46064973-46065080)
chr1 (16-130)||(23555286-23555399)
chr1 (23-141)||(50167185-50167302)
chr1 (36-145)||(13137982-13138089)
chr1 (14-126)||(22079348-22079461)
chr1 (67-148)||(37876769-37876848)
chr1 (36-127)||(1833577-1833667)
chr1 (67-130)||(36683766-36683828)
chr1 (16-143)||(196915-197042)
chr1 (36-141)||(3847131-3847234)
chr1 (36-141)||(19752741-19752844)
chr1 (16-141)||(37559877-37560003)
chr1 (14-126)||(41360946-41361058)
chr1 (36-124)||(6808507-6808595)
chr1 (36-111)||(16455676-16455750)
[»] chr6 (41 HSPs)
chr6 (14-247)||(16653144-16653389)
chr6 (14-247)||(16554901-16555146)
chr6 (14-247)||(16578409-16578654)
chr6 (14-247)||(16616726-16616971)
chr6 (14-247)||(16631457-16631702)
chr6 (14-247)||(25421337-25421582)
chr6 (14-247)||(6027278-6027522)
chr6 (14-247)||(34167110-34167356)
chr6 (14-247)||(13153945-13154191)
chr6 (14-245)||(27647893-27648126)
chr6 (14-240)||(34164888-34165128)
chr6 (14-247)||(33341995-33342243)
chr6 (16-239)||(412134-412369)
chr6 (16-230)||(3072670-3072895)
chr6 (16-148)||(2171534-2171665)
chr6 (16-149)||(30834537-30834670)
chr6 (16-148)||(5406202-5406334)
chr6 (16-148)||(5410527-5410659)
chr6 (16-148)||(31404677-31404809)
chr6 (65-241)||(6097349-6097535)
chr6 (16-148)||(16452331-16452463)
chr6 (16-143)||(5413401-5413528)
chr6 (16-148)||(33160354-33160486)
chr6 (16-148)||(21588965-21589096)
chr6 (16-148)||(21593698-21593829)
chr6 (53-143)||(5409076-5409164)
chr6 (39-148)||(3808710-3808819)
chr6 (16-148)||(17758057-17758189)
chr6 (16-148)||(17763024-17763156)
chr6 (16-148)||(26830126-26830257)
chr6 (14-148)||(2972942-2973075)
chr6 (14-148)||(5043659-5043793)
chr6 (16-145)||(9183037-9183165)
chr6 (36-148)||(26800642-26800753)
chr6 (16-148)||(22424828-22424961)
chr6 (67-145)||(16569108-16569184)
chr6 (16-148)||(28137411-28137542)
chr6 (16-141)||(26954296-26954420)
chr6 (16-145)||(33211191-33211319)
chr6 (16-145)||(603094-603222)
chr6 (16-127)||(3038926-3039037)
[»] chr2 (43 HSPs)
chr2 (14-247)||(13655921-13656168)
chr2 (14-247)||(12647278-12647523)
chr2 (14-245)||(6266723-6266964)
chr2 (16-239)||(4484232-4484465)
chr2 (16-239)||(30833379-30833612)
chr2 (16-148)||(4503135-4503266)
chr2 (16-148)||(45099789-45099920)
chr2 (16-239)||(32289597-32289832)
chr2 (16-148)||(5723258-5723390)
chr2 (16-144)||(2334424-2334552)
chr2 (39-148)||(36988078-36988186)
chr2 (16-148)||(36205667-36205798)
chr2 (16-148)||(6595008-6595140)
chr2 (16-148)||(45726963-45727094)
chr2 (16-145)||(34139776-34139905)
chr2 (14-145)||(723750-723880)
chr2 (16-142)||(14633834-14633960)
chr2 (16-145)||(29867903-29868031)
chr2 (39-148)||(35446887-35446994)
chr2 (16-149)||(1631734-1631866)
chr2 (36-145)||(17490154-17490261)
chr2 (23-141)||(11067346-11067463)
chr2 (16-145)||(36773596-36773724)
chr2 (36-145)||(17057375-17057482)
chr2 (36-145)||(17085358-17085465)
chr2 (14-130)||(42362384-42362500)
chr2 (14-145)||(33648203-33648335)
chr2 (15-145)||(11151597-11151726)
chr2 (14-148)||(24398089-24398224)
chr2 (16-145)||(38312274-38312402)
chr2 (39-145)||(36318015-36318119)
chr2 (36-145)||(26353239-26353346)
chr2 (36-148)||(7451173-7451282)
chr2 (14-143)||(11690533-11690661)
chr2 (16-141)||(33162460-33162584)
chr2 (82-145)||(39284936-39284998)
chr2 (36-100)||(7815323-7815386)
chr2 (40-139)||(28671989-28672088)
chr2 (14-116)||(13121801-13121901)
chr2 (16-145)||(42288117-42288244)
chr2 (178-239)||(4503037-4503099)
chr2 (82-148)||(17450678-17450742)
chr2 (36-145)||(11049608-11049716)
[»] chr3 (63 HSPs)
chr3 (14-247)||(25637458-25637706)
chr3 (14-247)||(3617481-3617726)
chr3 (14-245)||(45283015-45283260)
chr3 (14-245)||(54635157-54635397)
chr3 (14-242)||(6716532-6716770)
chr3 (14-247)||(4600636-4600882)
chr3 (14-247)||(4598415-4598661)
chr3 (14-247)||(10211425-10211671)
chr3 (14-247)||(10209205-10209451)
chr3 (14-240)||(10056249-10056489)
chr3 (14-240)||(10058471-10058711)
chr3 (14-240)||(10060693-10060933)
chr3 (14-240)||(10062915-10063155)
chr3 (14-240)||(10065137-10065377)
chr3 (16-241)||(7779903-7780138)
chr3 (16-241)||(801124-801355)
chr3 (16-234)||(23200045-23200272)
chr3 (23-230)||(23197850-23198066)
chr3 (16-148)||(37408492-37408624)
chr3 (16-148)||(7762299-7762431)
chr3 (16-148)||(19683891-19684023)
chr3 (16-148)||(45095197-45095329)
chr3 (16-148)||(5258146-5258278)
chr3 (16-148)||(9636128-9636260)
chr3 (14-148)||(9581314-9581448)
chr3 (16-148)||(5260325-5260457)
chr3 (16-148)||(7764498-7764630)
chr3 (16-148)||(34491246-34491377)
chr3 (16-145)||(4569986-4570115)
chr3 (14-145)||(39153367-39153497)
chr3 (16-148)||(49199471-49199604)
chr3 (111-240)||(10067435-10067576)
chr3 (40-148)||(6095602-6095708)
chr3 (14-143)||(22835010-22835138)
chr3 (16-141)||(30236159-30236283)
chr3 (16-145)||(44331579-44331707)
chr3 (13-145)||(32744442-32744573)
chr3 (23-148)||(41819525-41819650)
chr3 (16-148)||(54593738-54593869)
chr3 (14-145)||(29196392-29196522)
chr3 (67-148)||(43403746-43403826)
chr3 (16-130)||(29810902-29811016)
chr3 (16-148)||(43401803-43401936)
chr3 (36-130)||(760902-760995)
chr3 (39-145)||(40734556-40734660)
chr3 (16-145)||(40735417-40735545)
chr3 (14-145)||(29682391-29682521)
chr3 (14-84)||(10067359-10067431)
chr3 (16-142)||(31314479-31314604)
chr3 (14-148)||(46860506-46860640)
chr3 (36-143)||(53921511-53921616)
chr3 (16-145)||(29813097-29813225)
chr3 (16-141)||(46173391-46173515)
chr3 (42-148)||(55301974-55302079)
chr3 (67-145)||(16499115-16499191)
chr3 (40-145)||(40913352-40913455)
chr3 (36-141)||(44700489-44700591)
chr3 (16-141)||(51398848-51398972)
chr3 (13-145)||(23391915-23392046)
chr3 (15-143)||(32891137-32891264)
chr3 (16-145)||(5236463-5236590)
chr3 (83-142)||(27305719-27305777)
chr3 (70-145)||(47304340-47304413)
[»] scaffold0565 (1 HSPs)
scaffold0565 (14-247)||(2496-2741)
[»] chr7 (61 HSPs)
chr7 (14-247)||(18392088-18392333)
chr7 (14-247)||(18388652-18388897)
chr7 (14-234)||(20343929-20344158)
chr7 (14-247)||(6594450-6594695)
chr7 (14-247)||(6592232-6592477)
chr7 (14-247)||(32060214-32060461)
chr7 (59-247)||(1560557-1560757)
chr7 (14-205)||(24789873-24790074)
chr7 (16-239)||(39731402-39731635)
chr7 (16-148)||(35853948-35854080)
chr7 (16-148)||(25766962-25767095)
chr7 (16-231)||(43504063-43504290)
chr7 (16-148)||(23555074-23555206)
chr7 (23-148)||(29991094-29991219)
chr7 (16-148)||(34310718-34310850)
chr7 (16-148)||(48408836-48408970)
chr7 (23-148)||(19502219-19502344)
chr7 (36-144)||(25615908-25616015)
chr7 (36-148)||(32358057-32358167)
chr7 (16-145)||(41317440-41317568)
chr7 (16-148)||(22270007-22270138)
chr7 (39-148)||(8359318-8359427)
chr7 (14-145)||(41649017-41649146)
chr7 (16-148)||(4178808-4178939)
chr7 (16-145)||(14069839-14069967)
chr7 (16-145)||(14379867-14379995)
chr7 (16-145)||(27347851-27347979)
chr7 (16-143)||(30024740-30024866)
chr7 (16-146)||(6432005-6432134)
chr7 (16-149)||(2390316-2390448)
chr7 (16-149)||(29608771-29608903)
chr7 (16-145)||(18126678-18126806)
chr7 (16-148)||(3259029-3259160)
chr7 (16-148)||(48599337-48599468)
chr7 (36-148)||(4508709-4508819)
chr7 (36-148)||(4510551-4510661)
chr7 (36-148)||(4512393-4512503)
chr7 (16-130)||(48491613-48491727)
chr7 (16-145)||(8153376-8153504)
chr7 (16-145)||(31732975-31733103)
chr7 (39-143)||(23565069-23565171)
chr7 (16-142)||(47673953-47674077)
chr7 (16-145)||(2360978-2361106)
chr7 (16-141)||(2759207-2759331)
chr7 (16-145)||(38671228-38671356)
chr7 (16-145)||(43864278-43864406)
chr7 (36-145)||(31105399-31105506)
chr7 (36-145)||(48489486-48489593)
chr7 (14-141)||(4253538-4253665)
chr7 (16-143)||(47676144-47676270)
chr7 (201-245)||(24790230-24790274)
chr7 (16-145)||(4586195-4586323)
chr7 (16-132)||(1113691-1113807)
chr7 (14-52)||(1562103-1562141)
chr7 (36-145)||(6359958-6360065)
chr7 (47-145)||(18396384-18396481)
chr7 (67-145)||(24525508-24525584)
chr7 (67-143)||(31518988-31519063)
chr7 (36-130)||(496003-496096)
chr7 (82-145)||(30814536-30814598)
chr7 (67-141)||(36146418-36146490)
[»] chr4 (60 HSPs)
chr4 (14-247)||(8393426-8393671)
chr4 (14-247)||(8395635-8395880)
chr4 (14-247)||(7124933-7125178)
chr4 (14-247)||(7122714-7122959)
chr4 (14-246)||(5136095-5136341)
chr4 (14-246)||(5138320-5138566)
chr4 (16-245)||(31495203-31495452)
chr4 (16-148)||(29999808-29999941)
chr4 (16-148)||(56178639-56178771)
chr4 (16-148)||(13992295-13992426)
chr4 (16-148)||(5370085-5370218)
chr4 (16-148)||(48143077-48143209)
chr4 (16-148)||(52095365-52095496)
chr4 (16-147)||(41964449-41964580)
chr4 (36-148)||(2209768-2209880)
chr4 (16-148)||(6655990-6656121)
chr4 (36-148)||(50673850-50673960)
chr4 (16-148)||(46703534-46703667)
chr4 (16-145)||(12743931-12744059)
chr4 (16-145)||(12745320-12745448)
chr4 (14-148)||(379412-379546)
chr4 (16-142)||(9927467-9927592)
chr4 (36-130)||(8665463-8665556)
chr4 (16-145)||(12739556-12739684)
chr4 (16-145)||(40632479-40632607)
chr4 (16-148)||(8648173-8648304)
chr4 (17-145)||(36463395-36463522)
chr4 (16-148)||(41639460-41639591)
chr4 (36-145)||(48893644-48893751)
chr4 (14-148)||(12073424-12073558)
chr4 (16-142)||(37740659-37740784)
chr4 (39-145)||(26175642-26175746)
chr4 (16-145)||(26364270-26364398)
chr4 (36-142)||(35662496-35662600)
chr4 (16-145)||(36994558-36994686)
chr4 (16-145)||(46147397-46147525)
chr4 (36-145)||(4588014-4588121)
chr4 (16-145)||(47038417-47038544)
chr4 (16-148)||(50262703-50262835)
chr4 (36-145)||(54883075-54883182)
chr4 (15-145)||(6542185-6542314)
chr4 (14-148)||(12119571-12119705)
chr4 (16-142)||(27416974-27417099)
chr4 (16-145)||(34570420-34570548)
chr4 (36-145)||(5429734-5429841)
chr4 (36-145)||(31474206-31474313)
chr4 (14-145)||(26699447-26699579)
chr4 (16-110)||(12744087-12744181)
chr4 (15-145)||(45687188-45687317)
chr4 (14-145)||(5871852-5871982)
chr4 (14-145)||(52467360-52467490)
chr4 (16-110)||(12745476-12745570)
chr4 (16-130)||(54199926-54200040)
chr4 (16-112)||(12747794-12747890)
chr4 (56-130)||(13009464-13009536)
chr4 (67-141)||(37229731-37229803)
chr4 (14-145)||(5207848-5207978)
chr4 (16-148)||(52082666-52082791)
chr4 (67-145)||(29254580-29254656)
chr4 (53-145)||(51337137-51337226)
[»] chr8 (49 HSPs)
chr8 (14-245)||(25689987-25690228)
chr8 (14-245)||(3439536-3439776)
chr8 (14-247)||(15290554-15290800)
chr8 (14-247)||(15470923-15471169)
chr8 (16-247)||(42575217-42575460)
chr8 (16-239)||(2627768-2628002)
chr8 (16-148)||(17982687-17982819)
chr8 (16-148)||(31218291-31218423)
chr8 (16-148)||(44303889-44304021)
chr8 (16-148)||(1746221-1746352)
chr8 (16-148)||(34256509-34256641)
chr8 (16-148)||(42498228-42498360)
chr8 (16-148)||(19945361-19945494)
chr8 (16-148)||(34254333-34254465)
chr8 (16-148)||(42434994-42435125)
chr8 (13-145)||(3303676-3303807)
chr8 (16-148)||(18655434-18655565)
chr8 (36-148)||(4283579-4283689)
chr8 (16-145)||(15212820-15212948)
chr8 (16-145)||(27811312-27811440)
chr8 (16-145)||(33352184-33352312)
chr8 (23-145)||(5689312-5689433)
chr8 (36-130)||(1345391-1345484)
chr8 (16-145)||(12702640-12702768)
chr8 (16-145)||(43036457-43036585)
chr8 (36-144)||(41366622-41366727)
chr8 (57-145)||(4743220-4743306)
chr8 (39-145)||(40221803-40221907)
chr8 (16-145)||(40321114-40321242)
chr8 (36-145)||(6599027-6599134)
chr8 (36-145)||(6674480-6674587)
chr8 (36-145)||(10930205-10930312)
chr8 (16-144)||(18141854-18141981)
chr8 (14-124)||(40328811-40328922)
chr8 (13-144)||(1292471-1292600)
chr8 (36-148)||(11384040-11384150)
chr8 (16-130)||(30143374-30143488)
chr8 (16-112)||(44353827-44353923)
chr8 (14-145)||(4162529-4162658)
chr8 (36-150)||(18106082-18106191)
chr8 (39-145)||(4731716-4731820)
chr8 (36-145)||(10015136-10015241)
chr8 (67-145)||(4733792-4733868)
chr8 (15-142)||(30291640-30291767)
chr8 (16-100)||(9765779-9765863)
chr8 (14-126)||(19491723-19491835)
chr8 (41-145)||(3073880-3073981)
chr8 (36-143)||(7597669-7597776)
chr8 (67-139)||(8153844-8153914)
[»] scaffold0674 (1 HSPs)
scaffold0674 (14-247)||(3618-3863)
[»] scaffold0137 (1 HSPs)
scaffold0137 (14-247)||(6304-6551)
[»] scaffold0491 (2 HSPs)
scaffold0491 (16-239)||(11063-11296)
scaffold0491 (39-239)||(8637-8846)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-148)||(434567-434699)
[»] scaffold0286 (1 HSPs)
scaffold0286 (16-148)||(11591-11723)
[»] scaffold1808 (2 HSPs)
scaffold1808 (154-247)||(49-141)
scaffold1808 (118-147)||(1-30)
[»] scaffold1519 (1 HSPs)
scaffold1519 (16-148)||(950-1081)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-148)||(114636-114768)
[»] scaffold0176 (1 HSPs)
scaffold0176 (16-148)||(18006-18137)
[»] scaffold0236 (1 HSPs)
scaffold0236 (38-145)||(10546-10651)
[»] scaffold0466 (1 HSPs)
scaffold0466 (16-148)||(7361-7492)
[»] scaffold0066 (1 HSPs)
scaffold0066 (14-145)||(20421-20551)
[»] scaffold0006 (1 HSPs)
scaffold0006 (67-145)||(149103-149179)
[»] scaffold0219 (1 HSPs)
scaffold0219 (36-139)||(27453-27556)


Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 10593290 - 10593534
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10593290 gtttgttcatagtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcct 10593389  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgt 202  Q
    |||||||||||||||||||||||||||||||||||           |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10593390 ccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttctacttccctctccttgtttatcttgtgattgtgctttgtgt 10593489  T
Q  203 ttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10593490 ttcacacttgtttcctagattagatctaggtggtgttttgttgtt 10593534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 25078152 - 25078397
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25078152 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 25078251  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  25078252 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgctttg 25078349  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25078350 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 25078397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 25136121 - 25136366
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25136121 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 25136220  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  25136221 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgctttg 25136318  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25136319 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 25136366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 29720400 - 29720636
Alignment:
Q  18 gttcattgtgaacttgtc-aagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctcca 116  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |    
T  29720400 gttcattgtgaacttgtctaatctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaatctctcctcta 29720498  T
Q  117 gagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttc 205  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||  |||||||||||||||||  |||||||||    
T  29720499 gagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttatcttgtgattgtgtattgtgtttc 29720596  T
Q  206 acacttgtttcctagattagatctaggtggtgttttgttg 245  Q
     |||||||||||||||||||||||||||||||||||||||    
T  29720597 tcacttgtttcctagattagatctaggtggtgttttgttg 29720636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 29722560 - 29722796
Alignment:
Q  18 gttcattgtgaacttgtc-aagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctcca 116  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  29722560 gttcattgtgaacttgtctaatctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaatctctcctcca 29722658  T
Q  117 gagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttc 205  Q
    ||||||||||| ||||||||||||||||||||           ||| |||||||||||||||||||||||  |||||||||||||||||  |||||||||    
T  29722659 gagtaggtcaaatttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttatcttgtgattgtgtattgtgtttc 29722756  T
Q  206 acacttgtttcctagattagatctaggtggtgttttgttg 245  Q
     |||||||||||||||||||||||||||||||||||||||    
T  29722757 tcacttgtttcctagattagatctaggtggtgttttgttg 29722796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 40382333 - 40382578
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  40382333 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagttcaaactctcc 40382432  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   |||||||||||||||  |||||||||||||||||||||| |||||||    
T  40382433 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttcc--ctccttgtttatcttgtgattgttgctttg 40382530  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40382531 tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 40382578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 22536425 - 22536197
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  22536425 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggggagtacaatctctcct 22536327  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgt 202  Q
    |||||||||||||||||||||||||||||||||||           ||  ||||||||||||||||||| |||  ||||||||||||||||| |||| ||    
T  22536326 ccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctcccct--tttatcttgtgattgtgttttgagt 22536229  T
Q  203 ttcacacttgtttcctagattagatctaggtg 234  Q
    ||| ||||||||||||||||||||||||||||    
T  22536228 ttctcacttgtttcctagattagatctaggtg 22536197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 40380122 - 40380367
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||    
T  40380122 gtttgttcatagtgaacttgtcaaactaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagttcaaactctcc 40380221  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   |||||||||||||||  |||||||||||||||||||||| |||||||    
T  40380222 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttcc--ctccttgtttatcttgtgattgttgctttg 40380319  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40380320 tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 40380367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 29751296 - 29751055
Alignment:
Q  14 gtttgttcattgtgaacttgtcaag-ctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  29751296 gtttgttcattgtgaacttgtcaaatctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaatctctcc 29751198  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgt-atttgttttcttcttccctctccttgtttatcttgtgattgtgctttgt 200  Q
    ||||||||||||||||||||||||||||||||||||           |||  |||||||||||||||||||||||  |||||||||||||||||   |||    
T  29751197 tccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcct--tttatcttgtgattgtgtactgt 29751100  T
Q  201 gtttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||    
T  29751099 gtttctcacttgttttctagattatatctaggtggtgttttgttg 29751055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 16546661 - 16546909
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  16546661 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 16546760  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctcc-ttgtttatcttgtgatt--gtgct 196  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||| |||||||||||||| ||   ||||    
T  16546761 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgtttatcttgtgtttagttgct 16546860  T
Q  197 ttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |  |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  16546861 t--tgtttcacacttgtttcctagattggatttaggtggtgttttgttgtt 16546909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 16544439 - 16544687
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| |||||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  16544439 gtttgttcatagtgaacattgtcaagctaatttctcataacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 16544538  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctcc-ttgtttatcttgtgatt--gtgct 196  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||| |||||||||||||| ||   ||||    
T  16544539 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgtttatcttgtgtttagttgct 16544638  T
Q  197 ttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  16544639 t--tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtt 16544687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 9789359 - 9789119
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  9789359 ttgttccttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcct 9789261  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            ||| ||||||||| ||||||||||||  |||||||||||| |||||  |||||    
T  9789260 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcc--gtttatcttgtgcttgtgtattgtg 9789163  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    |||  ||||| |||||||||||||||||||||| ||||||||||    
T  9789162 tttttcacttctttcctagattagatctaggtgctgttttgttg 9789119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 16409508 - 16409743
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  16409508 ttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcct 16409606  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            ||| ||||||||| |||||||||||||  ||||||||||| ||||| ||| ||    
T  16409607 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtgttttatg 16409704  T
Q  202 tttcacac-ttgtttcctagattagatctaggtggtgtt 239  Q
     ||  ||| ||||||||||||||||||||||||| ||||    
T  16409705 cttttcactttgtttcctagattagatctaggtgttgtt 16409743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 18441783 - 18441539
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  18441783 ttgttccttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcct 18441685  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    | |||||||||||||||||||||||||||||||||            ||| ||||||||| ||||||||||||  |||||||||||| |||||  |||||    
T  18441684 ctagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcc--gtttatcttgtgcttgtgtattgtg 18441587  T
Q  202 ----tttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
        |||  ||||| |||||||||||||||||||||| ||||||||||    
T  18441586 tttttttttcacttctttcctagattagatctaggtgctgttttgttg 18441539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 26177915 - 26178150
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  26177915 ttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcct 26178013  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            ||| ||||||||| |||||||||||||  ||||||||||| ||||| ||| ||    
T  26178014 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtgttttatg 26178111  T
Q  202 tttcacac-ttgtttcctagattagatctaggtggtgtt 239  Q
     ||  ||| ||| ||||||||||||||||||||| ||||    
T  26178112 cttttcactttgattcctagattagatctaggtgttgtt 26178150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 25412794 - 25412926
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  25412794 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 25412891  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||| ||||||||||||    
T  25412892 ccagagtaggtcaagtttggactgaactgggtgaa 25412926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 37439175 - 37439307
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| | |||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  37439175 ttgttctttgtgaacttgtcaaagttaatttcttgtaactcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 37439272  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  37439273 ccagagtaggtcaagtttggaccgaactgggtgaa 37439307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 13343095 - 13343226
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||   ||||||||||| |||||||||||| ||||| |||||||||||    
T  13343095 ttgttctttgtgaacttgtcaaagctaatttcttgtaatccttttgtatctctttg--aagaactcatt-gatagtggattggagagttcaatctctcct 13343191  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||| |||||||||||||||||||||    
T  13343192 ccagagtaggtcatgtttggaccgaactgggtgaa 13343226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 13239792 - 13239917
Alignment:
Q  23 ttgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagt 120  Q
    ||||||||||||  |||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||    
T  13239792 ttgtgaacttgttgaagctaatttcttgtaactcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagt 13239889  T
Q  121 aggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||| ||||||||||||||||||||    
T  13239890 aggtcaaatttggaccgaactgggtgaa 13239917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 30182622 - 30182754
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||| |||| |||| | ||||||||||| |||||||||||| ||||| |||||||||||    
T  30182622 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttctatctctttgg-aagaactcatt-gatagtggattggagagttcaatctctcct 30182719  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||| ||||||||||||||||||||| ||||    
T  30182720 ccagagtatgtcaagtttggaccgaactggatgaa 30182754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 26170846 - 26170928
Alignment:
Q  65 cttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26170846 cttttgtaagaactcatt-gatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 26170928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 36074176 - 36074045
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||| ||||||||||| |||||||||||||||| |||||||||| ||||   ||||||||||| |||||||||||| ||||| |||||||||||    
T  36074176 ttgttctttgcgaacttgtcaaagctaatttcttgtaactcttttgtatctctttg--aagaactcatt-gatagtggattggagagttcaatctctcct 36074080  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| |||||||||||||||||||||||||| ||||    
T  36074079 ccaaagtaggtcaagtttggaccgaactggatgaa 36074045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 213499 - 213631
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| ||||| || |||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  213499 ttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 213596  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| |||||||||||||||||||||||||||||||    
T  213597 ccatagtaggtcaagtttggaccgaactgggtgaa 213631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 40147316 - 40147426
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||| |||||    
T  40147316 aagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaag-ttgga 40147412  T
Q  135 ccgaactgggtgaa 148  Q
    ||||||||||||||    
T  40147413 ccgaactgggtgaa 40147426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 32636858 - 32636986
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| |||| |||||||||| ||||||||||||||| ||||  ||||||||||     
T  32636858 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc-tttgatagtggattggagagatcaatctctccc 32636955  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  32636956 ccagattaggtcaag-ttggaccgaactgggt 32636986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 28278350 - 28278481
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||| |||||||| |||||||||||| ||||  |||||||||||    
T  28278350 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaaaaactcatt-gatagtggattggagagatcaatctctcct 28278447  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||||||||||||    
T  28278448 ccagagtaggtcaag-ttggaccgaactgggtgaa 28278481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 13488237 - 13488365
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  13488237 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 13488334  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||| ||||||||| ||||||||||||||||    
T  13488335 cgagattaggtcaag-ttggaccgaactgggt 13488365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 27637723 - 27637614
Alignment:
Q  39 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggacc 136  Q
    ||||||||||||||||  ||||||||| |||| |||||||||||||  ||||||||||| ||||  ||||||||||| ||||||||||||   |||||||    
T  27637723 ctaatttcttgtaacccattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctgcagagtaggtcattgttggacc 27637627  T
Q  137 gaactgggtgaat 149  Q
    |||||||||||||    
T  27637626 gaactgggtgaat 27637614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 5058131 - 5058210
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||| |||||||||||| ||||  |||||||||||| ||||||||||||| |||||||||||||||||||    
T  5058131 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctctagagtaggtcaag-ttggaccgaactgggtgaa 5058210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 33831712 - 33831842
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||||||||  |||||||||    
T  33831712 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattgaagagatcaatctctc 33831809  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||| | ||||||||| |||||| |||||||||    
T  33831810 ccccatattaggtcaag-ttggactgaactgggt 33831842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 42428557 - 42428436
Alignment:
Q  23 ttgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagt 120  Q
    ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||| ||| | |    
T  42428557 ttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccatatt 42428460  T
Q  121 aggtcaagtttggaccgaactgggt 145  Q
    |||||||| ||||||||||||||||    
T  42428459 aggtcaag-ttggaccgaactgggt 42428436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 16452135 - 16452242
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| |||||||||||||  ||||||||||| ||||   ||||||||| ||||||||||||||| |||||    
T  16452135 aagctaatttcttgtaacccatttgtatctcttt-gtaagaactcattc-atagtggattggagagataaatctctcccccagagtaggtcaag-ttgga 16452231  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  16452232 ccgaactgggt 16452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 8566082 - 8565956
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||||  ||||||||||| | ||||||||||||| |||||||||||| ||||  |||||||||    
T  8566082 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctct-gtaagaactcatt-gatagtggattggagagatcaatctctc 8565985  T
Q  112 ctccagagtaggtcaagtttggaccgaact 141  Q
      ||||| ||||||||| ||||||||||||    
T  8565984 acccagattaggtcaag-ttggaccgaact 8565956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 31183031 - 31183133
Alignment:
Q  40 taatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaa 139  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||| ||||  | |||||||| ||| | ||||||||| ||||||||||    
T  31183031 taatttcttgtaaccatttgtatccc-tttgtaagaactca-ttgatactggattggagagatctatctctcccccatattaggtcaag-ttggaccgaa 31183127  T
Q  140 ctgggt 145  Q
    ||||||    
T  31183128 ctgggt 31183133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 30683056 - 30682930
Alignment:
Q  18 gttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaa--ctcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||| ||||||||||||  ||||||||||||||||||| ||||||||  |||| |||||||  |||||| |||||||||||| ||||  ||||||||||     
T  30683056 gttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttcttt-gtaagaatactcatt-gatagtggattggagagatcaatctctccc 30682959  T
Q  114 ccagagtaggtcaagtttggaccgaactgg 143  Q
    ||||| ||||||||| ||||||||||||||    
T  30682958 ccagattaggtcaag-ttggaccgaactgg 30682930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 27015609 - 27015688
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||| |||||||||||| | ||  |||||||||||||| | ||||||||| |||||||||||||||||||    
T  27015609 tttgtaagaactcatt-gatagtggattgtacagatcaatctctcctccaaaataggtcaag-ttggaccgaactgggtgaa 27015688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 538080 - 538185
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||| ||||| ||||  |||||||||| ||| | ||||||||| |||||    
T  538080 aagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtagattggagagatcaatctctcccccatattaggtcaag-ttgga 538176  T
Q  135 ccgaactgg 143  Q
    |||||||||    
T  538177 ccgaactgg 538185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 28750738 - 28750661
Alignment:
Q  66 ttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||||||||||||| |||||||||||| ||||  |||||||||| ||||| ||||||||| |||||||||| |||||    
T  28750738 ttttgtaagaactcatt-gatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaattgggt 28750661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 533824 - 533931
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||| ||||||||  |||||||| |||| ||||||||||||| |||||||||||| | ||  |||||||||| ||| | ||||||||| |||||    
T  533824 aagctaattttttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggaaagatcaatctctcccccatattaggtcaag-ttgga 533920  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  533921 ccgaactgggt 533931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 9049455 - 9049354
Alignment:
Q  36 aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||| |||| ||||||||| ||||  |||| ||||| ||| ||||||| ||| |||||    
T  9049455 aagctaatttcttgtaaccattttgtatctc-tttgtaagaactca-ttgacagtggattggagagatcaatatctcccccaaagtaggtgaag-ttgga 9049359  T
Q  135 ccgaa 139  Q
    |||||    
T  9049358 ccgaa 9049354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 16641073 - 16640961
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  ||||| ||||||  |||| |||||||||| |||| |||||||||    ||||||||||||| ||||  |||||||||    
T  16641073 gtttgttctttgtgagcttgttgaagctgatttctgataactcttttgtatctcttt-gtaagaact----tgatagtggattggagagatcaatctctc 16640979  T
Q  112 ctccagagtaggtcaagt 129  Q
    ||||||||||||||||||    
T  16640978 ctccagagtaggtcaagt 16640961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 42426369 - 42426255
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||| ||||  |||||||||||||| ||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  42426369 ttgttctttgtgaaattgttgaagctaatttcttgcaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 42426272  T
Q  114 ccagagtaggtcaagtt 130  Q
    || || |||||||||||    
T  42426271 cctgattaggtcaagtt 42426255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 19806463 - 19806525
Alignment:
Q  82 ttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||| ||||  |||||||||| ||||| ||||||||| ||||||||||||||||    
T  19806463 ttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggt 19806525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 39468683 - 39468555
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||| || |||||||| | |||||||||||||| |||||||||||||  ||||  ||||||||||     
T  39468683 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaactca-ttgatagtggattagagagatcaatctctccc 39468586  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||||| ||  |||||| |||||||||    
T  39468585 ccatattaggttaa-attggactgaactgggt 39468555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 4160702 - 4160762
Alignment:
Q  85 atagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||||||| ||||  ||||||||||||||||||||||||   ||||||| ||||||||    
T  4160702 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaactgggt 4160762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 13695827 - 13695713
Alignment:
Q  14 gtttgttcattgtgaacttgtcaa-gctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| ||||| || ||||||||||||||| ||||||||||| ||||   ||||||||| || ||||||||||  ||||   | ||||||    
T  13695827 gtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttgtatctctttgtaaagaactca-ttaatagtggattagagagattattctctc 13695729  T
Q  112 ctccagagtaggtcaa 127  Q
    ||||| ||||||||||    
T  13695728 ctccatagtaggtcaa 13695713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 141
Target Start/End: Original strand, 316817 - 316922
Alignment:
Q  36 aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||||||||||||| ||||||||||| ||||   ||||||||||| |||| ||||| | || |  |||||||||| | |||||||||||   |||||    
T  316817 aagctaatttcttgtaatccttttgtatctctttgtaaagaactcatt-gataatggatcggagggatcaatctctcccctagagtaggtcattgttgga 316915  T
Q  135 ccgaact 141  Q
    |||||||    
T  316916 ccgaact 316922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 30182790 - 30182852
Alignment:
Q  178 tttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt 239  Q
    ||||||||||| ||||| |||||| ||  ||||| ||||||||||||||||||||||| ||||    
T  30182790 tttatcttgtgcttgtgttttgtgcttttcactttgtttcctagattagatctaggtgttgtt 30182852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 33906144 - 33906035
Alignment:
Q  36 aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||| ||||||||| ||||||||||| ||||   ||||||||||| |||||| ||||| | ||  |||||||| | | ||||||||||||  |||||    
T  33906144 aagctaacttcttgtaatccttttgtatctctttgtaaagaactcatt-gatagtagattggaaagatcaatctcttccctagagtaggtcaatgttgga 33906046  T
Q  135 ccgaactgggt 145  Q
    |||| ||||||    
T  33906045 ccgagctgggt 33906035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 42310048 - 42309953
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttg 132  Q
    |||||||||||||||||| |||||||||| | |||||||||||| | |||||||||||||   |||  |||||||||| ||| ||||| | |||||||    
T  42310048 aagctaatttcttgtaactcttttgtatctc-tttgtaagaactta-ttgatagtggattagcgagatcaatctctcccccatagtagattaagtttg 42309953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 3075794 - 3075661
Alignment:
Q  14 gtttgttcattgtgaacttg-tcaagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||| | || ||||||||||||||||  ||||||||  ||||||||||| || || ||||||| |||| ||||  |||||||||    
T  3075794 gtttgttctttgtgagcttgctgaatctaatttcttgtaacccatttgtatct-ttttgtaagaattcgtt-gatagtgaattggagagatcaatctctc 3075697  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |  || ||||||||||| ||||||| || ||||||||    
T  3075696 cctcatagtaggtcaag-ttggaccaaattgggtgaa 3075661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 9036449 - 9036692
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9036449 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattgaagagtacaatctctcct 9036547  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgt 202  Q
    | |||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036548 cgagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgt 9036647  T
Q  203 ttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9036648 ttcacacttgtttcctagattagatctaggtggtgttttgttgtt 9036692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 44203663 - 44203908
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  44203663 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 44203762  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  44203763 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgctttg 44203860  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203861 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 44203908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 40282413 - 40282649
Alignment:
Q  18 gttcattgtgaacttgtc-aagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctcca 116  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  40282413 gttcattgtgaacttgtctaatctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaatctctcctcca 40282511  T
Q  117 gagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttc 205  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||  |||||||||||||||||  |||||||||    
T  40282512 gagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttatcttgtgattgtgtattgtgtttc 40282609  T
Q  206 acacttgtttcctagattagatctaggtggtgttttgttg 245  Q
     |||||||||||||||||||||||||||||||||||||||    
T  40282610 tcacttgtttcctagattagatctaggtggtgttttgttg 40282649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 21053990 - 21054230
Alignment:
Q  14 gtttgttcattgtgaacttgtcaag-ctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  21053990 gtttgttcattgtgaacttgtcaaatctaatttcttgcaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaaactctcc 21054088  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtga-----------atgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||  |||||||||||||||||  |||||    
T  21054089 tccagagtaggtcaagtttggaccgaactgggtgaccaatctcttggtgtatttgttttcttcttccctctcct--tttatcttgtgattgtgtattgtg 21054186  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  21054187 tttctcacttgtttcctagattagatctaggtggtgttttgttg 21054230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 20622373 - 20622133
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaaccttttgtatccctttt--gtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||    
T  20622373 ttgttcattgtgaacttgtcaaatctaatttcttgtaaccttttgtatcccttttttgtaagaactc-tttgatagtggattggagagtacaatctctcc 20622275  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    ||||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||  |||||||||||||||||  |||||    
T  20622274 tccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttatcttgtgattgtgtattgtg 20622177  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  20622176 tttctcacttgtttcctagattagatctaggtggtgttttgttg 20622133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 9987235 - 9987474
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctc 114  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  9987235 ttgttcattgtgaacttgtctaatctaatttcttgcaaccttttgtatcccttttgcaagaactcatt-gatagtggattggagagtacaatctctcctc 9987333  T
Q  115 cagagtaggtcaagtttggaccgaactgggtgaa-----------tgt-atttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgt 202  Q
    ||||||||||||||||||||||||||||||||||           |||  |||||||||||||||||||||||  |||||||||||||||||  | ||||    
T  9987334 cagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcct--tttatcttgtgattgtgtatagtgt 9987431  T
Q  203 ttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  9987432 ttctcacttgtttcctagattagatctaggtggtgttttgttg 9987474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 51765436 - 51765663
Alignment:
Q  23 ttgtgaacttgtcaa-gctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagag 119  Q
    ||||||||||||||| |||||||||||||||||  ||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  51765436 ttgtgaacttgtcaaagctaatttcttgtaaccccttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcctccagag 51765534  T
Q  120 taggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacac 209  Q
    |||| ||||||||||||||||||||||||          ||| ||||||||| |||||||||||||  ||||||||||| ||||| |||||| ||  |||    
T  51765535 taggacaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtggtttgtgcttttcac 51765632  T
Q  210 -ttgtttcctagattagatctaggtggtgtt 239  Q
     ||||||||||||||||||||||||| ||||    
T  51765633 tttgtttcctagattagatctaggtgttgtt 51765663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 13316486 - 13316354
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||| ||||| |||||||||||    
T  13316486 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgg-aagaactcatt-gatagtggattggagagttcaatctctcct 13316389  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  13316388 ccagagtaggtcaagtttggaccgaactgggtgaa 13316354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 8550923 - 8550789
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  8550923 gtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctc 8550826  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||||    
T  8550825 ctccagagtaggtcaagtttggaccgaactgggtgaa 8550789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 3189364 - 3189496
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||| |||||| ||||||||||  ||||||||||||||||| |||||||||||| ||||  ||||||||| |    
T  3189364 ttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatct-ttttgtaagaactcatt-gatagtggattggagagatcaatctctcat 3189461  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  3189462 ccagagtaggtcaagtttggaccgaactgggtgaa 3189496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 3198181 - 3198313
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||| |||||| ||||||||||  ||||||||||||||||| |||||||||||| ||||  ||||||||| |    
T  3198181 ttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatct-ttttgtaagaactcatt-gatagtggattggagagatcaatctctcat 3198278  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  3198279 ccagagtaggtcaagtttggaccgaactgggtgaa 3198313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 3207020 - 3207152
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||| |||||| ||||||||||  ||||||||||||||||| |||||||||||| ||||  ||||||||| |    
T  3207020 ttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtatct-ttttgtaagaactcatt-gatagtggattggagagatcaatctctcat 3207117  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  3207118 ccagagtaggtcaagtttggaccgaactgggtgaa 3207152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 20762706 - 20762837
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||  ||||||||||||| |||||||||||| ||||  |||||||||||    
T  20762706 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttc-gtaagaactcatt-gatagtggattggagagatcaatctctcct 20762803  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtga 147  Q
     ||||||||||||||||||||||||||| |||||    
T  20762804 acagagtaggtcaagtttggaccgaactaggtga 20762837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 42298088 - 42297977
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| | |||||    
T  42298088 aagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattgaagagatcaatctctcctccagagtaggtcatggttgga 42297991  T
Q  135 ccgaactgggtgaa 148  Q
    ||||||||||||||    
T  42297990 ccgaactgggtgaa 42297977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 37168331 - 37168463
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  |||||||||||||||||||  ||||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||    
T  37168331 ttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcc 37168428  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||| |||||||||||||||||||    
T  37168429 tccagagtaggtcaag-ttggaccgaactgggtgaa 37168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 13547223 - 13547092
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||| ||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  13547223 ttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 13547126  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||||||||||||    
T  13547125 ccagagtaggtcaag-ttggaccgaactgggtgaa 13547092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 47255474 - 47255342
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  47255474 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 47255377  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||   |||||||||||||||||||    
T  47255376 ccagagtaggtcattgttggaccgaactgggtgaa 47255342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 31925840 - 31925710
Alignment:
Q  17 tgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctc 114  Q
    |||||||||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||||    
T  31925840 tgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctc 31925743  T
Q  115 cagagtaggtcaagtttggaccgaactgggtgaa 148  Q
     ||||||||||||| |||||||||||| ||||||    
T  31925742 tagagtaggtcaag-ttggaccgaactaggtgaa 31925710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 834301 - 834173
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  | ||||||||     
T  834301 ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatctatctctccc 834204  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||||||||||| ||||||||||||||||    
T  834203 ccagagtaggtcaag-ttggaccgaactgggt 834173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 28220360 - 28220232
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  28220360 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 28220263  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  28220262 ccagattaggtcaag-ttggaccgaactgggt 28220232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 28265688 - 28265560
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| |||||  |||||||||||||||||||  |||||||| |||| |||||||||| ||||||||||||||| ||||  ||||||||||     
T  28265688 ttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc-tttgatagtggattggagagatcaatctctccc 28265591  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  28265590 ccagattaggtcaag-ttggaccgaactgggt 28265560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 11348732 - 11348863
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| ||||  |||||||||||| |||||||||||| ||||  |||||||||||    
T  11348732 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttc-taagaactcatt-gatagtggattggagagatcaatctctcct 11348829  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| ||||||||||||| |||||    
T  11348830 ccagagtaggtcaag-ttggaccgaactgagtgaa 11348863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 13549110 - 13549003
Alignment:
Q  39 ctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    |||||||| |||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||| ||||||||    
T  13549110 ctaatttcatgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccg 13549014  T
Q  138 aactgggtgaa 148  Q
    |||||||||||    
T  13549013 aactgggtgaa 13549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 29136281 - 29136413
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||| ||||  |||||||  |||| ||||||||||||| ||| |||||||| ||||  |||||||||||    
T  29136281 ttgttctttgtgagcttgttgaagctaatttcttggaacccatttgtatttcttt-gtaagaactcatt-gatcgtggattggagagatcaatctctcct 29136378  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||| ||||||    
T  29136379 ccagagtaggtcaagtttggaccgaactaggtgaa 29136413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 34603610 - 34603740
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||| |||| |||| ||||||||||||| ||| |||||||||||||  ||||||||||    
T  34603610 ttgttctttgtgagcttgtttaagctaatttcttgtaacccattttttatctcttt-gtaagaactcatt-gatggtggattgaagagatcaatctctcc 34603707  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtg 146  Q
    |||||||||||||||| |||||||||||| ||||    
T  34603708 tccagagtaggtcaag-ttggaccgaactaggtg 34603740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 7482365 - 7482233
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  |||||||||||||||||||  ||||||||| |||| ||||||||||||| ||||||| |||| ||||  ||||||||||    
T  7482365 ttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaagaactcatt-gatagtgaattggagagatcaatctctcc 7482268  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | |||||||||||||| |||||||||||| ||||||    
T  7482267 ttcagagtaggtcaag-ttggaccgaactaggtgaa 7482233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 3156899 - 3157027
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  3156899 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 3156996  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||||||||| ||||||||||||||||    
T  3156997 ccatattaggtcaag-ttggaccgaactgggt 3157027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 44455194 - 44455322
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  || ||||||||||||||| | ||||||||  ||||||||||||||||| |||||||||||| ||||  ||||||||||     
T  44455194 ttgttctttgtgaacttgttgaaactaatttcttgtaactcatttgtatct-ttttgtaagaactcatt-gatagtggattggagagatcaatctctccc 44455291  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| |||||||||||| |||||||||||||    
T  44455292 ccagattaggtcaagttt-gaccgaactgggt 44455322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 4552750 - 4552643
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||| |||| ||||||| ||||  ||||||||||  |||||||||||||| |||||    
T  4552750 aagctaatttcttgtaacccctttgtatcccttt-gtaagaactcatt-gataatggattggagagatcaatctctccctcagagtaggtcaag-ttgga 4552654  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  4552653 ccgaactgggt 4552643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 193666 - 193776
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| |||| |||| |||||||| |||||||||||| ||||  |||||||| |||||||||| |||||| |||||    
T  193666 aagctaatttcttgtaactcatttgtatctcttt-gtaataactcatt-gatagtggattggagagatcaatctcttctccagagtatgtcaag-ttgga 193762  T
Q  135 ccgaactgggtgaa 148  Q
    ||||||||||||||    
T  193763 ccgaactgggtgaa 193776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 50169344 - 50169218
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||||| |||||||||||||||| | |||||||| |||| ||||| ||||||| |||||||||||||||||  ||||||||||     
T  50169344 ttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttgtatctcttt-gtaagtactcatt-gatagtggattgaagagatcaatctctccc 50169247  T
Q  114 ccagagtaggtcaagtttggaccgaactgg 143  Q
    | ||| ||||||||| ||||||||||||||    
T  50169246 ctagattaggtcaag-ttggaccgaactgg 50169218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 45644489 - 45644360
Alignment:
Q  15 tttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||| |||||| |||||||| |||||||||||| ||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||| |||||    
T  45644489 tttgttctttgtgagcttgtcaaagctaatttcttgcaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatatctcc 45644392  T
Q  113 tccagagtaggtcaagtttggaccgaactgggt 145  Q
     ||||| ||||||||| ||||||||||||||||    
T  45644391 cccagattaggtcaag-ttggaccgaactgggt 45644360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 47115205 - 47115338
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  |||||||||||||||||||  ||||||||| |||| |||| ||| |||| |||||||||||| ||||  |||||||| |    
T  47115205 ttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaaaaacccatt-gatagtggattggagagatcaatctctgc 47115302  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||   |||||||||||||||||||    
T  47115303 tccagagtaggtcattgttggaccgaactgggtgaa 47115338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 49918384 - 49918508
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  49918384 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 49918481  T
Q  114 ccagagtaggtcaagtttggaccgaact 141  Q
    ||| | ||||||||| ||||||||||||    
T  49918482 ccaaattaggtcaag-ttggaccgaact 49918508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 15820339 - 15820455
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||| | |||||||| ||||| |||||||||||| ||||||| |||||||||   ||||||||    
T  15820339 gtttgttctttgtgagcttgttgaagctaatttcttgtaacacatttgtatctctttt-taagaactcatt-gatagtgcattgaagagataaatctctc 15820436  T
Q  112 ctccagagtaggtcaagtt 130  Q
     ||||||||||||||||||    
T  15820437 atccagagtaggtcaagtt 15820455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 28223534 - 28223427
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||| ||| | ||||||||| |||||    
T  28223534 aagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccatattaggtcaag-ttgga 28223438  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  28223437 ccgaactgggt 28223427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 28242391 - 28242470
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||  ||||||||||| ||||  ||||||||||||||||||||||||   |||||||||||||||||||    
T  28242391 tttgtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaa 28242470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 37033207 - 37033074
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  ||||||||||||||||| |  ||||| ||| |||| ||||||||||||| |||||||||||| ||||   ||||||| |    
T  37033207 ttgttctttgtgagcttgttgaagctaatttcttgtaatccattttgcatctcttt-gtaagaactcatt-gatagtggattggagagattaatctcttc 37033110  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||| ||||||||| | |||||||||||||||||||    
T  37033109 tccatagtaggtcatggttggaccgaactgggtgaa 37033074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 37503688 - 37503577
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctc 114  Q
    |||||| ||||||||||||  |||||||||||||||||||||  ||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||| |    
T  37503688 ttgttctttgtgaacttgttgaagctaatttcttgtaacctt--gtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccc 37503593  T
Q  115 cagagtaggtcaagtt 130  Q
    |||| || ||||||||    
T  37503592 cagattatgtcaagtt 37503577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 19754529 - 19754657
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  19754529 ttgttctttgtgagcttgttgaagctaatttcttgtaaccgatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 19754626  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
     |||| ||||||||| |||||||||| |||||    
T  19754627 tcagattaggtcaag-ttggaccgaagtgggt 19754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 13659418 - 13659342
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||||| |||||||||||| ||||  |||||||||| ||||||||||| ||| ||||||||||||||||    
T  13659418 tttgtaagaactcatt-gatagtggattggagagatcaatctctcccccagagtaggttaag-ttggaccgaactgggt 13659342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 31659293 - 31659400
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| ||||||||| ||| |||||||||||| ||||  ||||||||||  |||| ||||||||| |||||    
T  31659293 aagctaatttcttgtaacccatttgtatctcttt-gtaagaacttatt-gatagtggattggagagatcaatctctccctcagattaggtcaag-ttgga 31659389  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  31659390 ccgaactgggt 31659400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 46064973 - 46065080
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | | |||||| |||| |||||||||||||  ||||||||||| ||||  |||||||||| ||||||||||||||| |||||    
T  46064973 aagctaatttcttgtaactcatgtgtatctcttt-gtaagaactcattc-atagtggattggagagatcaatctctcccccagagtaggtcaag-ttgga 46065069  T
Q  135 ccgaactgggt 145  Q
     ||||||||||    
T  46065070 tcgaactgggt 46065080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 23555399 - 23555286
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  || |||||||||| |||| | |||||||| |||| ||||||||||||| |||||||||||| ||||| ||||||||||     
T  23555399 ttgttctttgtgaacttgttgaaactaatttcttataactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagttcaatctctcc- 23555303  T
Q  114 ccagagtaggtcaagtt 130  Q
    ||| |||||||||||||    
T  23555302 ccatagtaggtcaagtt 23555286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 50167302 - 50167185
Alignment:
Q  23 ttgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagt 120  Q
    |||||| |||||||| |||||||||||||||||  |||||||| |||| |||| |||||||| |||||||||||| ||||  |||||||||| ||||| |    
T  50167302 ttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaaaaactcatt-gatagtggattggagagatcaatctctcccccagatt 50167205  T
Q  121 aggtcaagtttggaccgaact 141  Q
    || ||||| ||||||||||||    
T  50167204 agctcaag-ttggaccgaact 50167185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 13138089 - 13137982
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||| ||| |||| |||||||| |||| |||||||||||||||||  |||||||||| | |||||||||| |  |||||    
T  13138089 aagctaatttcttgtaacccatttgcatctcttt-gtaagaacacatt-gatagtggattgaagagagcaatctctcccctagagtaggtc-atattgga 13137993  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  13137992 ccgaactgggt 13137982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 22079348 - 22079461
Alignment:
Q  14 gtttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| ||||| || ||||||||||||||||| ||||||||| ||||   ||||||||| |||||| ||||||| ||||  |||| ||||    
T  22079348 gtttgttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaactca-ttgatattggattggagagatcaatttctc 22079446  T
Q  112 ctccagagtaggtca 126  Q
    ||||| |||||||||    
T  22079447 ctccaaagtaggtca 22079461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 37876848 - 37876769
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||| |||||||| |||||||||||| ||||  |||||||||||||||||||  ||||| ||| |||||||||||||||    
T  37876848 tttgtaataactcatt-gatagtggattgcagagatcaatctctcctccagagtacatcaag-ttgaaccgaactgggtgaa 37876769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 1833577 - 1833667
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaa 127  Q
    ||||||| |||||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||| ||||| ||||||||    
T  1833577 aagctaaattcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccaccagattaggtcaa 1833667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 36683766 - 36683828
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtt 130  Q
    |||||||||||||||| |||||||||||| |||   |||||||||| |||||||||||||||||    
T  36683766 tttgtaagaactcatt-gatagtggattgtagaaatcaatctctcccccagagtaggtcaagtt 36683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 197042 - 196915
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct-cc 112  Q
    |||||| |||||| |||||  ||| |||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||| ||||    |||||| ||    
T  197042 ttgttctttgtgagcttgtttaagttaatttcttgtaactcatttgtatcccttt-gtaagaactca-ttgatagtggattggagagatttatctctccc 196945  T
Q  113 tccagagtaggtcaagtttggaccgaactgg 143  Q
     ||||| ||||||||| ||||||||||||||    
T  196944 cccagattaggtcaag-ttggaccgaactgg 196915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 3847234 - 3847131
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||| || ||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  | |||||| | ||||| ||||||||| |||||    
T  3847234 aagctaaatttttgtaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatccatctcttccccagattaggtcaag-ttgga 3847138  T
Q  135 ccgaact 141  Q
    |||||||    
T  3847137 ccgaact 3847131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 141
Target Start/End: Original strand, 19752741 - 19752844
Alignment:
Q  36 aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| | |||||||||||||| ||||||| |||||| ||||  |||||||||  ||| | ||||||||| |||||    
T  19752741 aagctaatttcttgtaaccgatttgtatctc-tttgtaagaactca-ttgatagaggattggagagatcaatctctctcccatattaggtcaag-ttgga 19752837  T
Q  135 ccgaact 141  Q
    |||||||    
T  19752838 ccgaact 19752844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 37560003 - 37559877
Alignment:
Q  16 ttgttcattgtgaacttgtc--aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| ||||||||||||   ||||||||||||||||| || |||||||| | |||||||||||||  ||||||||| |||| ||||  ||||||||||    
T  37560003 ttgttctttgtgaacttgttgaaagctaatttcttgtaacccatttgtatctc-tttgtaagaactc-gttgatagtgaattggagagatcaatctctcc 37559906  T
Q  113 tcc-agagtaggtcaagtttggaccgaact 141  Q
     || ||| ||||||||| ||||||||||||    
T  37559905 ccctagattaggtcaag-ttggaccgaact 37559877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 41360946 - 41361058
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  || ||||||||||||||||  |||||||| |||| |||||||||| || ||||||||||| |||||  |||| ||||    
T  41360946 gtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt-gtaagaactcgtt-gatagtggattaaagagatcaatatctc 41361043  T
Q  112 ctccagagtaggtca 126  Q
    | ||| |||||||||    
T  41361044 ccccatagtaggtca 41361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 6808507 - 6808595
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggt 124  Q
    ||||||| |||||||||| |||||||||| ||||   |||||||||||| ||||||||||| ||||  |||||||| |  ||||||||||    
T  6808507 aagctaacttcttgtaactcttttgtatctctttgtaaagaactcattt-atagtggattggagagatcaatctcttcctcagagtaggt 6808595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 16455676 - 16455750
Alignment:
Q  36 aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    ||||||||||||||||| || |||||||| | | |||||||||||| |||||||||||||| ||||  |||||||||    
T  16455676 aagctaatttcttgtaacccatttgtatctc-tgtgtaagaactca-ttgatagtggattggagagatcaatctctc 16455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 16653144 - 16653389
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  16653144 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcct 16653243  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16653244 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 16653343  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16653344 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 16653389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 16554901 - 16555146
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  16554901 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcct 16555000  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    ||| |||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16555001 ccaaagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 16555100  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16555101 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 16555146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 16578654 - 16578409
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  16578654 gtttgctcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcct 16578555  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16578554 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 16578455  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16578454 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 16578409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 16616726 - 16616971
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  16616726 gtttgctcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcct 16616825  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616826 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 16616925  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16616926 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 16616971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 16631457 - 16631702
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  16631457 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcct 16631556  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    ||| |||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16631557 ccaaagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 16631656  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16631657 tttcacacttgtttcctagattagatctaggtggtgttttgttgtt 16631702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 25421337 - 25421582
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25421337 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 25421436  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   |||||||||||||||  |||||||||||||||||||||| |||||||    
T  25421437 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttcc--ctccttgtttatcttgtgattgttgctttg 25421534  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25421535 tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 25421582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 6027278 - 6027522
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  6027278 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 6027377  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||| ||||||||||||||||||||||||||         ||| |   |||||||||||||||||| | |  ||||||||||||||| |||||||    
T  6027378 tccagagtatgtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc-cat--tttatcttgtgattgttgctttg 6027474  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6027475 tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 6027522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 34167110 - 34167356
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||| ||||||||| |||||    
T  34167110 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaacttatttgatagtggattggagagtacaaactctc 34167209  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgcttt 198  Q
    |||||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||||||  ||||||||||||| ||||||    
T  34167210 ctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgcttt 34167307  T
Q  199 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  34167308 gtgtttcacacttggttcctagatttgatctaggtggtgttttgttgtt 34167356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 13153945 - 13154191
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  13153945 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 13154044  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattg-tgcttt 198  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||  ||||||||||||| ||||||    
T  13154045 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgcttt 13154142  T
Q  199 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  13154143 gtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtt 13154191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 27647893 - 27648126
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  27647893 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaaactctcct 27647991  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgt 202  Q
    ||||||||| |||||||||||||||||||||||||           ||  |||||||||||||||||||||||  ||||||      |||||  ||| ||    
T  27647992 ccagagtagatcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctctcct--tttatc------ttgtgtattgagt 27648083  T
Q  203 ttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  27648084 ttctcacttgtttcctagattagatctaggtggtgttttgttg 27648126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 34164888 - 34165128
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  34164888 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 34164987  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctt 197  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||| ||   |||||    
T  34164988 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgctt 34165087  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttt 240  Q
      |||||||||||||||||||||||| ||||||||||||||||    
T  34165088 --tgtttcacacttgtttcctagattggatctaggtggtgttt 34165128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 33342243 - 33341995
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||  |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  33342243 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtactccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 33342144  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctcc-ttgtttatcttgtgatt--gtgct 196  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||| |||||||||||||| ||   ||||    
T  33342143 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgtttatcttgtgtttagttgct 33342044  T
Q  197 ttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33342043 t--tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 33341995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 412134 - 412369
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||| ||||  |||||||||||||||   ||||||||| |||||||||||||||||| |||||||||||  ||||| ||||||||||    
T  412134 ttgttcattgtgaacttatcaaatctaatttcttgtaactctttttgtatctcttttgtaagaactcatt-gatagtggattagagagttcaatctctcc 412232  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgt 200  Q
    ||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||  ||||||||||| |||||  ||||    
T  412233 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctcct--tttatcttgtgcttgtgtattgt 412330  T
Q  201 gtttcacacttgtttcctagattagatctaggtggtgtt 239  Q
    ||||  |||||||| ||||||||||||||||||| ||||    
T  412331 gtttttcacttgttacctagattagatctaggtgctgtt 412369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 3072895 - 3072670
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||  |||||||||||||||   ||||||||| |||||||||||||||||| ||||||| |||| ||||| ||||||||||    
T  3072895 ttgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaactcatt-gatagtgaattggagagttcaatctctcc 3072797  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    ||||||||||||||||||||||||||||||||||||           ||| ||||||||| |||||||||||||  ||||||||||| ||||| ||| ||    
T  3072796 tccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtgttttatg 3072699  T
Q  202 tttcacacttgtttcctagattagatcta 230  Q
     ||  ||||||||||||||||||||||||    
T  3072698 cttttcacttgtttcctagattagatcta 3072670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 2171665 - 2171534
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctc 114  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||||| ||||| ||||||||||||    
T  2171665 ttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttgtatctcttt-gtaagaactcatt-gatagtggattggagagttcaatctctcctc 2171568  T
Q  115 cagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||||||||||||||||||    
T  2171567 cagagtaggtcaagtttggaccgaactgggtgaa 2171534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 30834670 - 30834537
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||| ||||| |||||||||||    
T  30834670 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgg-aagaactcatt-gatagtggattggagagttcaatctctcct 30834573  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaat 149  Q
    ||||||||||||||||||||||||||||||||||||    
T  30834572 ccagagtaggtcaagtttggaccgaactgggtgaat 30834537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 5406334 - 5406202
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  5406334 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 5406237  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||| |||||||||||||||    
T  5406236 ccagagtaggtcaagtttgaaccgaactgggtgaa 5406202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 5410659 - 5410527
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  5410659 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 5410562  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||| |||||||||||||||    
T  5410561 ccagagtaggtcaagtttgaaccgaactgggtgaa 5410527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 31404809 - 31404677
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  31404809 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 31404712  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||| ||||||||||||||||||||||||    
T  31404711 ccagagtaggccaagtttggaccgaactgggtgaa 31404677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 6097535 - 6097349
Alignment:
Q  65 cttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgta 152  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||            |||     
T  6097535 cttttgtaagaactcatt-gatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtc 6097437  T
Q  153 tttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg-tttcacacttgtttcctagattagatctaggtggtgtttt 241  Q
    ||||||||| |||||||||||||||  |||||||||||||||  ||||| |||  |||||||| ||||||||||||| ||||| ||||||    
T  6097436 tttgttttcctcttccctctccttg--tatcttgtgattgtgtattgtgtttttccacttgttacctagattagatcaaggtgctgtttt 6097349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 16452463 - 16452331
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaaccttttg-tatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||  |||| |||| | ||||||||||| |||||||||||| ||||| |||||||||||    
T  16452463 ttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttcatatctctttgg-aagaactcatt-gatagtggattggagagttcaatctctcct 16452366  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  16452365 ccagagtaggtcaagtttggaccgaactgggtgaa 16452331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 5413528 - 5413401
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||| ||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  5413528 ttgttctttgcgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 5413431  T
Q  114 ccagagtaggtcaagtttggaccgaactgg 143  Q
    ||||||||||||||||||||||||||||||    
T  5413430 ccagagtaggtcaagtttggaccgaactgg 5413401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 33160486 - 33160354
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||| ||| |||||||| ||||  |||||||||||    
T  33160486 ttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctcttt-gtaagaactcatt-gatggtggattggagagatcaatctctcct 33160389  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||  ||||||||||||| |||||||||||    
T  33160388 ccagagtatttcaagtttggaccaaactgggtgaa 33160354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 21588965 - 21589096
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  21588965 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 21589062  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||||||||||||    
T  21589063 ccagagtaggtcaag-ttggaccgaactgggtgaa 21589096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 21593698 - 21593829
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  21593698 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 21593795  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||||||||||||    
T  21593796 ccagagtaggtcaag-ttggaccgaactgggtgaa 21593829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 143
Target Start/End: Complemental strand, 5409164 - 5409076
Alignment:
Q  53 ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgg 143  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||    
T  5409164 ccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg 5409076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 3808819 - 3808710
Alignment:
Q  39 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggacc 136  Q
    ||||||||||||||||  ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||| | |||||||    
T  3808819 ctaatttcttgtaacccattttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcatgattggacc 3808722  T
Q  137 gaactgggtgaa 148  Q
    ||||| ||||||    
T  3808721 gaactaggtgaa 3808710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 17758057 - 17758189
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||| |||    
T  17758057 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctcccct 17758154  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | ||||||| |||||||||||||||||| ||||||    
T  17758155 ctagagtagttcaagtttggaccgaactaggtgaa 17758189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 17763024 - 17763156
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||| | ||||||||  ||||| ||||||||||| |||||||||||| || |  |||||||||||    
T  17763024 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatct-ttttggaagaactcatt-gatagtggattggagtgatcaatctctcct 17763121  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||| |||||||||||||||||| ||||||    
T  17763122 ccagagtagatcaagtttggaccgaactaggtgaa 17763156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 26830257 - 26830126
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  ||||||||||||||||| || |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  26830257 ttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 26830160  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| |||||||||||||| ||| ||||||||||||    
T  26830159 ccaaagtaggtcaagttt-gactgaactgggtgaa 26830126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 2973075 - 2972942
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  2973075 gtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctc 2972978  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| ||||||||||||| || ||||||||| ||||||    
T  2972977 ctcaagagtaggtcaag-ttcgaccgaactaggtgaa 2972942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 5043659 - 5043793
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||| ||||| ||||  |||||||||    
T  5043659 gtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtagattggagagatcaatctctc 5043756  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||| |||||||||   |||||||||||||||||||    
T  5043757 ctccatagtaggtcattgttggaccgaactgggtgaa 5043793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 9183165 - 9183037
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||| ||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  9183165 ttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 9183068  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| || |||||| ||||||||||||||||    
T  9183067 ccagattatgtcaag-ttggaccgaactgggt 9183037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 26800642 - 26800753
Alignment:
Q  36 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgg 133  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||| ||||  ||||||||||||||||||||||||   ||||    
T  26800642 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 26800738  T
Q  134 accgaactgggtgaa 148  Q
    |||||||||| ||||    
T  26800739 accgaactggatgaa 26800753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 22424961 - 22424828
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc---ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||| |||||| |||||  |||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||| ||||  |||||||||    
T  22424961 ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctc 22424865  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    || ||||||||||||   |||||||| ||||||||||    
T  22424864 cttcagagtaggtcattgttggaccgtactgggtgaa 22424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 16569108 - 16569184
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||||| |||||||||||| ||||  |||||||||||||||| ||||||||| ||||||||||||||||    
T  16569108 tttgtaagaactcatt-gatagtggattggagagatcaatctctcctccagattaggtcaag-ttggaccgaactgggt 16569184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 28137542 - 28137411
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||  |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  28137542 ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatttcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 28137445  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||| || |||||    
T  28137444 ccagagtaggtcaag-ttggaccgaattgtgtgaa 28137411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 26954420 - 26954296
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||| | | |||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  26954420 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatctgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 26954323  T
Q  114 ccagagtaggtcaagtttggaccgaact 141  Q
    ||| ||||||||||| ||||||||||||    
T  26954322 ccaaagtaggtcaag-ttggaccgaact 26954296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 33211319 - 33211191
Alignment:
Q  16 ttgttcattgtgaacttg-tcaagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||| | ||| |||||||||||| | | |||||||| |||| |||||||||||||| ||| ||||||| ||||  ||||||||||     
T  33211319 ttgttctttgtgagcttgatgaagttaatttcttgtagctcatttgtatctcttt-gtaagaactcattt-ataatggattggagagatcaatctctccc 33211222  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||||||||||| ||||||||||||||||    
T  33211221 ccagagtaggtcaag-ttggaccgaactgggt 33211191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 603222 - 603094
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||||||||| || |||||||||||| |||   ||||||||||     
T  603222 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcgtt-gatagtggattggagaaatcaatctctccc 603125  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||| ||||||||| ||||||||||||||||    
T  603124 caagattaggtcaag-ttggaccgaactgggt 603094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 3039037 - 3038926
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| ||| |  |||||||||||||||||||  |||||||| |||| |||||||||| ||| ||||||||||| ||||   |||||||||     
T  3039037 ttgttcattgtgagctttttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc-tttaatagtggattggagagattaatctctccc 3038940  T
Q  114 ccagagtaggtcaa 127  Q
    ||||| ||||||||    
T  3038939 ccagattaggtcaa 3038926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 13656168 - 13655921
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13656168 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcct 13656069  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtg---aatgtat----------ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    |||||||||||||||||||||||||||||||||   ||| | |          ||||||||||||||||||||||||||||||||||||||| |||||||    
T  13656068 ccagagtaggtcaagtttggaccgaactgggtgaccaatctctttggtgtttgttgttttcttcttccctctccttgtttatcttgtgattgttgctttg 13655969  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13655968 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 13655921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 12647523 - 12647278
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  12647523 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 12647424  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  12647423 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgctttg 12647326  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12647325 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 12647278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 6266723 - 6266964
Alignment:
Q  14 gtttgttcattgtgaacttgtcaag-ctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  6266723 gtttgttcattgtgaacttgtcaaatctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaatctctcc 6266821  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgt-atttgttttcttcttccctctccttgtttatcttgtgattgtgctttgt 200  Q
    ||||||||||||||||||||||||||||||||||||           |||  ||||||||||||||||||||||  |||||||||||| |||||  ||||    
T  6266822 tccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcc--gtttatcttgtgcttgtgtattgt 6266919  T
Q  201 gtttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    ||||  ||||| |||||||||||||||||||||| ||||||||||    
T  6266920 gtttttcacttctttcctagattagatctaggtgttgttttgttg 6266964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 4484465 - 4484232
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  4484465 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcct 4484367  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtt 203  Q
    |||||||||||||||||||||| ||||||||||||          ||| |||||||||||||||||||||||  ||||||||||| ||||| ||| || |    
T  4484366 ccagagtaggtcaagtttggacagaactgggtgaacaatctttggtgtctttgttttcttcttccctctcct--tttatcttgtgcttgtggtttttgct 4484269  T
Q  204 tcacac-ttgtttcctagattagatctaggtggtgtt 239  Q
    |  ||| ||||||||||||||||||||||||| ||||    
T  4484268 tttcactttgtttcctagattagatctaggtgttgtt 4484232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 30833379 - 30833612
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  30833379 ttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcct 30833477  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtt 203  Q
    |||||||||||||||||||||| ||||||||||||          ||| ||||||||| |||||||||||||  ||||||||||| ||||| |||||| |    
T  30833478 ccagagtaggtcaagtttggactgaactgggtgaacaatctttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtggtttgtgct 30833575  T
Q  204 tcacac-ttgtttcctagattagatctaggtggtgtt 239  Q
    |  ||| ||||||||||||||||||||||||| ||||    
T  30833576 tttcactttgtttcctagattagatctaggtgttgtt 30833612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 4503266 - 4503135
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||   ||||||||||| |||||||||||| ||||| |||||||||||    
T  4503266 ttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttg--aagaactcatt-gatagtggattggagagttcaatctctcct 4503170  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  4503169 ccagagtaggtcaagtttggaccgaactgggtgaa 4503135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 45099789 - 45099920
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||   ||||||||||| |||||||||||| ||||| |||||||||||    
T  45099789 ttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttg--aagaactcatt-gatagtggattggagagttcaatctctcct 45099885  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  45099886 ccagagtaggtcaagtttggaccgaactgggtgaa 45099920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 32289597 - 32289832
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||| ||||||  |||  ||||  |||||||||||    
T  32289597 ttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcatt-gatagtaaattagagagatcaatctctcct 32289695  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            |||  |||||||| |||||||||||||  ||||||||||| ||||| ||| ||    
T  32289696 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtccttgttttcctcttccctctcct--tttatcttgtgcttgtgttttatg 32289793  T
Q  202 tttcacac-ttgtttcctagattagatctaggtggtgtt 239  Q
     ||  ||| ||||||||||||||||||||||||| ||||    
T  32289794 cttttcactttgtttcctagattagatctaggtgttgtt 32289832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 5723390 - 5723258
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacctttt-gtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  5723390 ttgttctttgtgaacttgtcaaagctaatttcttgtaacctttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 5723293  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | ||||||||| |||||||||||||||||||||||    
T  5723292 ctagagtaggttaagtttggaccgaactgggtgaa 5723258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 2334552 - 2334424
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||| ||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  2334552 ttgttctttgtgaacttgttgaagctaatttctagtaactcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 2334455  T
Q  114 ccagagtaggtcaagtttggaccgaactggg 144  Q
    |||||||||||||||||||||||||||||||    
T  2334454 ccagagtaggtcaagtttggaccgaactggg 2334424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 36988186 - 36988078
Alignment:
Q  39 ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  36988186 ctaatttcttgtaactcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccg 36988089  T
Q  138 aactgggtgaa 148  Q
    |||||||||||    
T  36988088 aactgggtgaa 36988078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 36205798 - 36205667
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||   ||||||||||| || || |||||| ||||| |||||| ||||    
T  36205798 ttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttg--aagaactcatt-gacagcggattggagagttcaatctatcct 36205702  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  36205701 ccagagtaggtcaagtttggaccgaactgggtgaa 36205667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 6595140 - 6595008
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||||| ||| |||| |||||||||| || |||||||||||| ||||  |||||||||||    
T  6595140 ttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctcttt-gtaagaactcgtt-gatagtggattggagagatcaatctctcct 6595043  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||||||||||||| |||||    
T  6595042 ccagagtaggtcaagtttggaccgaactgagtgaa 6595008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 45726963 - 45727094
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  45726963 ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 45727060  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||||||||||||    
T  45727061 ccagagtaggtcaag-ttggaccgaactgggtgaa 45727094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 34139905 - 34139776
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaaccttt-tgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||     
T  34139905 ttgttctttgtgagcttgtttaagctaatttcttgtaacccatatgtatcccttttgtaagaactcatt-gatagtggattggagagatcaatctctccc 34139807  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  34139806 ccagattaggtcaag-ttggaccgaactgggt 34139776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 723880 - 723750
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  723880 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctc 723783  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||||| ||||||||| ||||||||||||||||    
T  723782 ccccagattaggtcaag-ttggaccgaactgggt 723750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 14633960 - 14633834
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||| ||||  ||||||||||     
T  14633960 ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttttgtaagaactcata-gatagtggattggagagatcaatctctccc 14633862  T
Q  114 ccagagtaggtcaagtttggaccgaactg 142  Q
    ||||| ||||||||| |||||||||||||    
T  14633861 ccagattaggtcaag-ttggaccgaactg 14633834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 29867903 - 29868031
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| |||| |||||||||| ||||||||||||||| ||||  ||||||||||     
T  29867903 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc-tttgatagtggattggagagatcaatctctccc 29868000  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||||||||| ||||||||||||||||    
T  29868001 ccaaattaggtcaag-ttggaccgaactgggt 29868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 35446994 - 35446887
Alignment:
Q  39 ctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    ||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  || ||||||||||||||||||||||| ||||||||    
T  35446994 ctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcactctctcctccagagtaggtcaag-ttggaccg 35446898  T
Q  138 aactgggtgaa 148  Q
    |||||||||||    
T  35446897 aactgggtgaa 35446887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 1631866 - 1631734
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||| ||||||||||  |||||||| |||| ||||||||||||| |||||||||||| |||   |||||||||||    
T  1631866 ttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagaaatcaatctctcct 1631769  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaat 149  Q
    ||||||||||||||| ||||||||||||| ||||||    
T  1631768 ccagagtaggtcaag-ttggaccgaactgagtgaat 1631734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 17490261 - 17490154
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| |||||||| | |||| ||||||||||||| |||||||||||| ||||  |||||||||| | |||||||||||| ||||||    
T  17490261 aagctaatttcttgtaactcttttgtaactcttt-gtaagaactcatt-gatagtggattgtagagatcaatctctcccctagagtaggtcaa-tttgga 17490165  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  17490164 ccgaactgggt 17490154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 11067346 - 11067463
Alignment:
Q  23 ttgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagt 120  Q
    |||||| |||||||| |||||||||||||||||  |||||||| |||| |||||||||||||| ||| ||||||||||||  |||||||||| ||||| |    
T  11067346 ttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcattt-ataatggattgaagagatcaatctctcccccagatt 11067443  T
Q  121 aggtcaagtttggaccgaact 141  Q
    |||||||| ||||||||||||    
T  11067444 aggtcaag-ttggaccgaact 11067463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 36773596 - 36773724
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| |||||||||| ||||||||||||||| ||||  ||||||||||     
T  36773596 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc-tttgatagtggattggagagatcaatctctccc 36773693  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| || |||||| ||||||||||||||||    
T  36773694 ccagattatgtcaag-ttggaccgaactgggt 36773724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 17057482 - 17057375
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||| ||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||| ||||| ||||||||| |||||    
T  17057482 aagctaattttttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccagactaggtcaag-ttgga 17057386  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  17057385 ccgaactgggt 17057375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 17085465 - 17085358
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||| ||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||| ||||| ||||||||| |||||    
T  17085465 aagctaattttttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccagactaggtcaag-ttgga 17085369  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  17085368 ccgaactgggt 17085358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 42362384 - 42362500
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  | |||||||    
T  42362384 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatctatctctc 42362481  T
Q  112 ctccagagtaggtcaagtt 130  Q
    | ||||| |||||||||||    
T  42362482 ccccagattaggtcaagtt 42362500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 33648203 - 33648335
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  ||||||||||| ||||||| ||||||||  ||||   ||||||||||| ||||| |||||| ||||  |||||||||    
T  33648203 gtttgttctttgtgagcttgttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcatt-gatagcggattggagagatcaatctctc 33648301  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||||   ||||||||||||||||    
T  33648302 ctccagagtaggtcattgttggaccgaactgggt 33648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 11151726 - 11151597
Alignment:
Q  15 tttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||||||||| || |||||||||||| ||||  ||| ||||||    
T  11151726 tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt-gtaagaactc-ttagatagtggattggagagatcaacctctcc 11151629  T
Q  113 tccagagtaggtcaagtttggaccgaactgggt 145  Q
     ||||| ||||||||| ||||||||||||||||    
T  11151628 cccagattaggtcaag-ttggaccgaactgggt 11151597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 24398089 - 24398224
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  ||||||||||||||||||| ||||||||| ||||   ||||||||||| |||| ||||||| ||||  |||||||||    
T  24398089 gtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatt-gataatggattggagagatcaatctctc 24398187  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | ||| |||||||||   |||||||||||||| ||||    
T  24398188 ccccatagtaggtcattgttggaccgaactggctgaa 24398224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 38312274 - 38312402
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  || ||||||||||||||||  |||||||| |||| |||||| |||||| |||||||||||| ||||  ||||||||||     
T  38312274 ttgttctttgtgaacttgttgaaactaatttcttgtaacccatttgtatctcttt-gtaagatctcatt-gatagtggattggagagatcaatctctccc 38312371  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| || |||||| ||||||||||||||||    
T  38312372 ccagattatgtcaag-ttggaccgaactgggt 38312402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 36318119 - 36318015
Alignment:
Q  39 ctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    ||||||| ||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||   ||||||||||||| ||||||||    
T  36318119 ctaatttattgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccttagagtaggtcaag-ttggaccg 36318023  T
Q  138 aactgggt 145  Q
    ||||||||    
T  36318022 aactgggt 36318015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 26353239 - 26353346
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| ||||||||||  ||||||||| ||||||| |||||||||||| ||||  || |||||||   ||||||||||||| |||||    
T  26353239 aagctaatttcttgtaacacttttgtatct-ttttgtaagtactcatt-gatagtggattggagagatcactctctcccttagagtaggtcaag-ttgga 26353335  T
Q  135 ccgaactgggt 145  Q
    |||||| ||||    
T  26353336 ccgaaccgggt 26353346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 7451173 - 7451282
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||  | |||||||| |||| |||| |||||||| |||||||||||| ||||  |||||||||||| | ||||||||||| |||||    
T  7451173 aagctaatttcttgtaattcatttgtatctcttt-gtaataactcatt-gatagtggattgcagagatcaatctctcctctacagtaggtcaag-ttgga 7451269  T
Q  135 ccgaactgggtgaa 148  Q
     |||||||||||||    
T  7451270 -cgaactgggtgaa 7451282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 11690533 - 11690661
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  ||||||||||||||||| || |||||||||| |||||||||| ||  |||||||||||||| ||||  ||| |||||    
T  11690533 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccc-tttgtaagaaatc-gttgatagtggattggagagatcaacctctc 11690630  T
Q  112 ctccagagtaggtcaagtttggaccgaactgg 143  Q
    | ||| | || |||||| ||||||||||||||    
T  11690631 ccccatattacgtcaag-ttggaccgaactgg 11690661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 33162584 - 33162460
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| || | ||||||||||||| |||||||||||  ||||  ||||||||||     
T  33162584 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctct-gtaagaactcatt-gatagtggattagagagatcaatctctccc 33162487  T
Q  114 ccagagtaggtcaagtttggaccgaact 141  Q
    | ||| ||||||||| ||||||||||||    
T  33162486 ctagattaggtcaag-ttggaccgaact 33162460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 39284936 - 39284998
Alignment:
Q  82 ttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||| ||||  |||||||||| ||||| ||||||||| ||||||||||||||||    
T  39284936 ttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggt 39284998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 7815386 - 7815323
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagag 100  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||| ||||    
T  7815386 aagctaatttcttgtaactcttttgtatctc-tttgtaagaactcattt-atagtggattggagag 7815323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 28671989 - 28672088
Alignment:
Q  40 taatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccga 138  Q
    ||||||||||| ||| ||||||||| ||||   ||||||||| | || ||||||||| ||||  ||||||||||||||||||||||||   |||||||||    
T  28671989 taatttcttgttaccgttttgtatctctttacaaagaactcact-gacagtggattggagagatcaatctctcctccagagtaggtcattgttggaccga 28672087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 13121801 - 13121901
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||| |||||| |||||  ||| |||||||||||||||||| ||||| |||| |||  |||||||| ||||||||||||||||   ||||||||||    
T  13121801 gtttgttctttgtgagcttgttgaagataatttcttgtaaccttt-gtatctcttt-gtagaaactcatt-gatagtggattgaagaaatcaatctctcc 13121897  T
Q  113 tcca 116  Q
    ||||    
T  13121898 tcca 13121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 42288244 - 42288117
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||| ||||||||  |||||||  |||| |||||| |||||| |||| ||||||| ||||  ||||||||||     
T  42288244 ttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatttcttt-gtaagagctcatt-gataatggattggagagatcaatctctcc- 42288148  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||||| ||||||||||||||    
T  42288147 ccagattaggtcaagtt-ggaccgaactgggt 42288117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 4503099 - 4503037
Alignment:
Q  178 tttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt 239  Q
    ||||||||||| ||||| |||||| ||  ||||| ||||||||||||||||||||||| ||||    
T  4503099 tttatcttgtgcttgtgttttgtgcttttcactttgtttcctagattagatctaggtgctgtt 4503037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 17450678 - 17450742
Alignment:
Q  82 ttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||| ||||  ||||||||||  |||||||||||||| |||||||||||| ||||||    
T  17450678 ttgatagtggattggagagatcaatctctcc-acagagtaggtcaag-ttggaccgaactaggtgaa 17450742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 11049608 - 11049716
Alignment:
Q  36 aagctaatttcttgtaacctttt--gtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgg 133  Q
    ||||||||||||| ||||| |||  ||||| |||| ||||||||||||| |||||| ||||||| ||  ||||||||||| || | ||||||||  ||||    
T  11049608 aagctaatttcttataacccttttagtatctcttt-gtaagaactcatt-gatagtagattgaaaagatcaatctctccttcataataggtcaa-attgg 11049704  T
Q  134 accgaactgggt 145  Q
    || |||||||||    
T  11049705 actgaactgggt 11049716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 25637458 - 25637706
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25637458 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 25637557  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtga------------atgtatttgttttcttcttccctctccttgtttatcttgtgattg--tgcttt 198  Q
    |||||||||||||||||||||||||||||||||||             ||  ||||||||||||||||||||||||||||||||||||||||  ||||||    
T  25637558 tccagagtaggtcaagtttggaccgaactgggtgaccaatctctttggtgcttttgttttcttcttccctctccttgtttatcttgtgattgtttgcttt 25637657  T
Q  199 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637658 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 25637706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 3617481 - 3617726
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  3617481 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 3617580  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  3617581 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgctttg 3617678  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3617679 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 3617726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 45283015 - 45283260
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatccctttt---gtaagaactcatttgatagtggattgaagagtacaatctct 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||    
T  45283015 gtttgttcatagtgaacttgtcaagctaatttcttgtaaccttttgtatccctttttttgtaagaactcatttgatagtggattggagagtacaatctct 45283114  T
Q  111 cctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttg 199  Q
    |||||||||||||||||||||||||||||||| |||||           ||  ||||||||||||||||||||||||||||||||||||||||||  |||    
T  45283115 cctccagagtaggtcaagtttggaccgaactgagtgaacaatctcttggtgcttttgttttcttcttccctctccttgtttatcttgtgattgtgtattg 45283214  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  45283215 tgtttctcactagtttcctagattagatctaggtggtgttttgttg 45283260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 54635157 - 54635397
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  54635157 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaaactctcct 54635255  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||||||||            ||  |||||||||||||||||||||||  |||||||||||||||||  |||||    
T  54635256 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctctcct--tttatcttgtgattgtgtattgtg 54635353  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  54635354 tttctcacttgtttcctagattagatctaggtggtgttttgttg 54635397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 242
Target Start/End: Original strand, 6716532 - 6716770
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  6716532 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaaactctcct 6716630  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgt 200  Q
    |||||||||||||||||||||||||||||||||||            ||  ||||||||||||||||||| |||  ||||||||||||||||   ||||     
T  6716631 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctcccct--tttatcttgtgattgtatttttga 6716728  T
Q  201 gtttcacacttgtttcctagattagatctaggtggtgttttg 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6716729 gtttcacacttgtttcctagattagatctaggtggtgttttg 6716770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 4600882 - 4600636
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  4600882 gtttgttcatagtgaacattgtcaagctaatttcttgtaaccttttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 4600783  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattgtgctttg 199  Q
    ||| |||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||||||||   ||     
T  4600782 ctctagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgattgttgatt- 4600684  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4600683 tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtt 4600636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 4598661 - 4598415
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  4598661 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 4598562  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattg-tgcttt 198  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||||||| |||||     
T  4598561 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgattgttgctt- 4598463  T
Q  199 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
     |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  4598462 -tgtttcacacttgtttcctagattggatctaggtggtgttttattgtt 4598415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 10211425 - 10211671
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10211425 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 10211524  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattg-tgcttt 198  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         |||||||| |||||||||||||||||||||||||||||| |||||     
T  10211525 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcatcttccctctccttgtttatcttgtgattgttgctt- 10211623  T
Q  199 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10211624 -tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtt 10211671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 10209205 - 10209451
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||  |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10209205 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtagtccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 10209304  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattg-tgcttt 198  Q
    ||||||||||||||||||||||||| |||||||||   ||| | |         |||||||| |||||||||||||||||||||||||||||| |||||     
T  10209305 ctccagagtaggtcaagtttggaccaaactgggtgaccaatctctttgtgtttattgttttcatcttccctctccttgtttatcttgtgattgttgctt- 10209403  T
Q  199 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10209404 -tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtt 10209451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 10056249 - 10056489
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10056249 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 10056348  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctt 197  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||| ||   |||||    
T  10056349 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgctt 10056448  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttt 240  Q
      |||||||||||||||||||||||| ||||||||||||||||    
T  10056449 --tgtttcacacttgtttcctagattggatctaggtggtgttt 10056489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 10058471 - 10058711
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10058471 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 10058570  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctt 197  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||| ||   |||||    
T  10058571 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgctt 10058670  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttt 240  Q
      |||||||||||||||||||||||| ||||||||||||||||    
T  10058671 --tgtttcacacttgtttcctagattggatctaggtggtgttt 10058711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 10060693 - 10060933
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10060693 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 10060792  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctt 197  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||| ||   |||||    
T  10060793 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgctt 10060892  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttt 240  Q
      |||||||||||||||||||||||| ||||||||||||||||    
T  10060893 --tgtttcacacttgtttcctagattggatctaggtggtgttt 10060933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 10062915 - 10063155
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10062915 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 10063014  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctt 197  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||| ||   |||||    
T  10063015 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgctt 10063114  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttt 240  Q
      |||||||||||||||||||||||| ||||||||||||||||    
T  10063115 --tgtttcacacttgtttcctagattggatctaggtggtgttt 10063155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 10065137 - 10065377
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10065137 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 10065236  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgatt--gtgctt 197  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||| ||   |||||    
T  10065237 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgctt 10065336  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttt 240  Q
      |||||||||||||||||||||||| ||||||||||||||||    
T  10065337 --tgtttcacacttgtttcctagattggatctaggtggtgttt 10065377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 7780138 - 7779903
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctc 114  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  7780138 ttgttcattgtgaacttgtcaaatctaatttcttgtaaccttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcctc 7780040  T
Q  115 cagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg-t 202  Q
    |||||||||||||||||||||| || ||||||||           ||| ||||||||| |||||||||||||  ||||||||||| |||||  ||||| |    
T  7780039 cagagtaggtcaagtttggaccaaagtgggtgaacaatctcttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtgtattgtgtt 7779942  T
Q  203 ttcacacttgtttcctagattagatctaggtggtgtttt 241  Q
    ||  |||||||||||||||||||||||||||| ||||||    
T  7779941 ttttcacttgtttcctagattagatctaggtgctgtttt 7779903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 801124 - 801355
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||  |||||||||||||||   ||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  801124 ttgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaactcatt-gatagtggattggagagtacaatctctcc 801222  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtg-attgtgctttgt 200  Q
    ||||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||  ||||||||||| ||||     |||    
T  801223 tccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttatcttgtgtattg-----tgt 801315  T
Q  201 gtttcacacttgtttcctagattagatctaggtggtgtttt 241  Q
     |||| |||||||||||||||||||||||||||| ||||||    
T  801316 ttttc-cacttgtttcctagattagatctaggtgctgtttt 801355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 23200272 - 23200045
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||| ||||||| |||| ||||| |||||||||||    
T  23200272 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatct-ttttgtaagaactcatt-gatagtgaattggagagttcaatctctcct 23200175  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtt 203  Q
    |||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||||  |||||||| || ||||| ||||||||    
T  23200174 ccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcttcttccctctcct--tttatcttatgcttgtggtttgtgtt 23200077  T
Q  204 tcaca-cttgtttcctagattagatctaggtg 234  Q
    |  ||  |||||||||||||||||||||||||    
T  23200076 tttcattttgtttcctagattagatctaggtg 23200045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 23198066 - 23197850
Alignment:
Q  23 ttgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagt 120  Q
    ||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||| ||||||| |||| ||||| ||||||||||||||||||    
T  23198066 ttgtgaacttgtcaaagctaatttcttgtaacccttttgtatct-ttttgtaagaactcatt-gatagtgaattggagagttcaatctctcctccagagt 23197969  T
Q  121 aggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcaca-c 209  Q
    ||||||||||||||||||||||||||||          ||| ||||||||| ||||| |||||||  ||||||||||| ||||| |||||||||  ||      
T  23197968 aggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttctctctcct--tttatcttgtgcttgtggtttgtgtttttcatt 23197871  T
Q  210 ttgtttcctagattagatcta 230  Q
    |||||||||||||||||||||    
T  23197870 ttgtttcctagattagatcta 23197850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 37408492 - 37408624
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||  |||||||||||    
T  37408492 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattgaagagatcaatctctcct 37408589  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||||| |||||||||||||    
T  37408590 ccagagtaggtcaagtttggatcgaactgggtgaa 37408624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 7762299 - 7762431
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  7762299 ttgttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 7762396  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  7762397 ccagagtaggtcaagtttggaccgaactgggtgaa 7762431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 19684023 - 19683891
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  19684023 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 19683926  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| |||||||||||||||||||||||||||||||    
T  19683925 ccatagtaggtcaagtttggaccgaactgggtgaa 19683891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 45095197 - 45095329
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  45095197 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 45095294  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | |||||||||||||||||||||||||||||||||    
T  45095295 ctagagtaggtcaagtttggaccgaactgggtgaa 45095329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 5258278 - 5258146
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||| ||||| |||||||| ||    
T  5258278 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgg-aagaactcatt-gatagtggattggagagttcaatctcttct 5258181  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||| ||||||    
T  5258180 ccagagtaggtcaagtttggaccgaacttggtgaa 5258146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 9636260 - 9636128
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||||  |||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  9636260 ttgttctttgtgaacttgtcaaaactaatttcttgtaacccttttgtatct-ttttgtaagaactcatt-gatagtggattggagagttcaatctctcct 9636163  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| ||||||||||||||| |||||||||||||||    
T  9636162 ccaaagtaggtcaagtttgaaccgaactgggtgaa 9636128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 9581314 - 9581448
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  ||||||||||||| |||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  9581314 gtttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctc 9581411  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||||    
T  9581412 ctccagagtaggtcaagtttggaccgaactgggtgaa 9581448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 5260457 - 5260325
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||| ||||| |||||||| ||    
T  5260457 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgg-aagaactcatt-gatagtggattggagagttcaatctcttct 5260360  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| |||||||||||||||||||||||| ||||||    
T  5260359 ccaaagtaggtcaagtttggaccgaacttggtgaa 5260325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 7764498 - 7764630
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||| || |||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||   ||||||||||    
T  7764498 ttgttctttgtgaacttgttaaagctaatttcttgtaactcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatgaatctctcct 7764595  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||| ||| ||||||||||||||||    
T  7764596 ccagagtaggtcaaatttagaccgaactgggtgaa 7764630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 34491246 - 34491377
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  34491246 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 34491343  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||||||||||||    
T  34491344 ccagagtaggtcaag-ttggaccgaactgggtgaa 34491377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 4569986 - 4570115
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| ||| |  |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||| ||    
T  4569986 ttgttcattgtgagcttattgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctact 4570083  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||||||| ||||||||||||||||||||    
T  4570084 ccagagtaggtgaagtttggaccgaactgggt 4570115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 39153497 - 39153367
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    ||||||||||||||| |||||  |||||||||||||||||| | |||||||||||||  |||||||||||| |||||||||||| |||| ||||||||||    
T  39153497 gtttgttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttta-taagaactcatt-gatagtggattggagagaacaatctctc 39153400  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||||| ||||||||| |||||| |||||||||    
T  39153399 ccccagattaggtcaag-ttggactgaactgggt 39153367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 49199604 - 49199471
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  |||||||||||||||||||  ||||||||| |||| ||||||||||||| |||||||||||| ||||   |||||||||    
T  49199604 ttgttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctcttt-gtaagaactcatt-gatagtggattggagagattaatctctcc 49199507  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||| ||||||| | |||||||||||||||||||    
T  49199506 tccagactaggtcatggttggaccgaactgggtgaa 49199471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 10067435 - 10067576
Alignment:
Q  111 cctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--gtgct 196  Q
    |||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| ||   ||||    
T  10067435 cctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgct 10067534  T
Q  197 ttgtgtttcacacttgtttcctagattagatctaggtggtgttt 240  Q
    |  |||||||||||||||||||||||| ||||||||||||||||    
T  10067535 t--tgtttcacacttgtttcctagattggatctaggtggtgttt 10067576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 6095708 - 6095602
Alignment:
Q  40 taatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccga 138  Q
    |||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||| |||||||||    
T  6095708 taatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaag-ttggaccga 6095612  T
Q  139 actgggtgaa 148  Q
    |||| |||||    
T  6095611 actgtgtgaa 6095602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 22835138 - 22835010
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  22835138 gtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctc 22835041  T
Q  112 ctccagagtaggtcaagtttggaccgaactgg 143  Q
    | ||| | ||||||||| ||||||||||||||    
T  22835040 cgccatattaggtcaag-ttggaccgaactgg 22835010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 30236159 - 30236283
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  30236159 ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 30236256  T
Q  114 ccagagtaggtcaagtttggaccgaact 141  Q
    ||||| ||||||||| ||||||||||||    
T  30236257 ccagattaggtcaag-ttggaccgaact 30236283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 44331579 - 44331707
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| |||||  ||||||||||||||||| || |||||||| |||| ||||||||| ||| |||||||||||| ||||  ||||||||||     
T  44331579 ttgttcattgtgagcttgttgaagctaatttcttgtaagccatttgtatctcttt-gtaagaacttatt-gatagtggattggagagatcaatctctccc 44331676  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  44331677 ccagattaggtcaag-ttggaccgaactgggt 44331707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 32744573 - 32744442
Alignment:
Q  13 agtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct 110  Q
    ||||||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| |||||||||| ||||||||||||||||||||   ||||| |    
T  32744573 agtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcacttt-gtaagaactc-tttgatagtggattgaagagataaatctat 32744476  T
Q  111 cctccagagtaggtcaagtttggaccgaactgggt 145  Q
    || ||||| ||||||||| ||||||||||||||||    
T  32744475 cccccagattaggtcaag-ttggaccgaactgggt 32744442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 41819650 - 41819525
Alignment:
Q  23 ttgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagag 119  Q
    |||||| |||||| |||||||||||||||||||  ||||||||| |||| |||||||||||||  ||||||||||| |||   |||||||||||||||||    
T  41819650 ttgtgagcttgtctaagctaatttcttgtaacccattttgtatctcttt-gtaagaactcatt--atagtggattggagacatcaatctctcctccagag 41819554  T
Q  120 taggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||   ||||||| |||||||||||    
T  41819553 taggtcattgttggaccaaactgggtgaa 41819525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 54593738 - 54593869
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||| ||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  54593738 ttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 54593835  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||| |||||| ||||||| |||||||||||    
T  54593836 ccagagtatgtcaag-ttggaccaaactgggtgaa 54593869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 29196522 - 29196392
Alignment:
Q  14 gtttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||||| |||||||||||| ||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  29196522 gtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctc 29196425  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||| | ||||||||| ||||||||||||||||    
T  29196424 ccccaaattaggtcaag-ttggaccgaactgggt 29196392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 43403826 - 43403746
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||| |||||||||||| ||||   ||||||||||||||||||||||| | |||||||||||||||||||    
T  43403826 tttgtaagaactcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaa 43403746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 29810902 - 29811016
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  29810902 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 29810999  T
Q  114 ccagagtaggtcaagtt 130  Q
    ||||| |||||||||||    
T  29811000 ccagattaggtcaagtt 29811016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 43401936 - 43401803
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  ||||||||||||||||||   |||| |||| |||| ||||||||||||| |||||||||||| |||    |||||||||    
T  43401936 ttgttctttgtgagcttgttgaagctaatttcttgtaacgcattttttatctcttt-gtaagaactcatt-gatagtggattggagaaattaatctctcc 43401839  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||| | |||||||||||||||||||    
T  43401838 tccagagtaggtcatggttggaccgaactgggtgaa 43401803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 760902 - 760995
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtt 130  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||||| ||||| |||||||||||    
T  760902 aagctaatttcttgtaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 760995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 40734556 - 40734660
Alignment:
Q  39 ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    ||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||||| ||| | ||||||||| ||||||||    
T  40734556 ctaatttcttgtaacacatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccaaattaggtcaag-ttggaccg 40734652  T
Q  138 aactgggt 145  Q
    ||||||||    
T  40734653 aactgggt 40734660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 40735417 - 40735545
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||| ||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  40735417 ttgttctttgtgagcttgttgaagctaatttattgtaaccagtttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 40735514  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  40735515 ccagattaggtcaag-ttggaccgaactgggt 40735545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 29682391 - 29682521
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  ||||||||||||||| |||  ||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  29682391 gtttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctc 29682488  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | | ||| ||| ||||| ||||||||||||||||    
T  29682489 ccctagattagatcaag-ttggaccgaactgggt 29682521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 10067359 - 10067431
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatttg 84  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  10067359 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 10067431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 31314479 - 31314604
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| |||||  |||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||| ||||  |||| |||||     
T  31314479 ttgttcattgtgatcttgttgaagctaatttcttgtaacccatttgtatct-ttttgtaagaactc-tttgatagtggattggagagatcaatatctccc 31314576  T
Q  114 ccagagtaggtcaagtttggaccgaactg 142  Q
    ||| | ||||||||| |||||||||||||    
T  31314577 ccatattaggtcaag-ttggaccgaactg 31314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 46860506 - 46860640
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||| |||||||| |||||||||||| ||||  |||||| ||    
T  46860506 gtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaataactcatt-gatagtggattggagagatcaatctttc 46860603  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||   |||||||||| ||| ||||    
T  46860604 ctccagagtaggtcattgttggaccgaattggatgaa 46860640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 53921616 - 53921511
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | ||||||||  ||||||||||||||||| |||||||||||| ||||  |||||||||| || |||||| |||||||| ||    
T  53921616 aagctaatttcttgtaactcatttgtatca-ttttgtaagaactcatt-gatagtggattggagagatcaatctctcccccggagtagatcaagttt-ga 53921520  T
Q  135 ccgaactgg 143  Q
    |||||||||    
T  53921519 ccgaactgg 53921511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 29813097 - 29813225
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||| || |||| ||| | ||||||||||||||||| ||||||||||| ||||  ||||||||||     
T  29813097 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgcatctc-tttgtaagaactcattt-atagtggattggagagatcaatctctccc 29813194  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| | ||||| | ||||||||||||||||    
T  29813195 ccagatttggtcatg-ttggaccgaactgggt 29813225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 46173391 - 46173515
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||| ||||| |||||||||||| ||||  ||||||||||     
T  46173391 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaattcatt-gatagtggattggagagatcaatctctccc 46173488  T
Q  114 ccagagtaggtcaagtttggaccgaact 141  Q
    ||||| ||||||||| ||||||||||||    
T  46173489 ccagattaggtcaag-ttggaccgaact 46173515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 55302079 - 55301974
Alignment:
Q  42 atttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaac 140  Q
    |||||||||||||| |||||||| |||| ||||||| ||||| |||||||||||| ||||  |||||||||||||| |||||||||   |||||||||||    
T  55302079 atttcttgtaacctatttgtatctcttt-gtaagaattcatt-gatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaac 55301982  T
Q  141 tgggtgaa 148  Q
    | ||||||    
T  55301981 ttggtgaa 55301974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 16499115 - 16499191
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||||| |||||||||||| ||||  |||||||||| ||||||||||| ||| ||||||||||||||||    
T  16499115 tttgtaagaactcatt-gatagtggattggagagatcaatctctcccccagagtaggttaag-ttggaccgaactgggt 16499191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 40913352 - 40913455
Alignment:
Q  40 taatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccga 138  Q
    |||||||||||||| | |||||||| |||| ||||||||||||  |||||||||||| ||||  |||||||||| ||||| ||||||||| |||||||||    
T  40913352 taatttcttgtaactcatttgtatctcttt-gtaagaactcatc-gatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccga 40913448  T
Q  139 actgggt 145  Q
    |||||||    
T  40913449 actgggt 40913455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 44700591 - 44700489
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||| ||||  |||||||||| ||| | ||||||||| |||||    
T  44700591 aagctaatttcttgtaacctatttgtatctcttt-gtaagaactc-tttgatagtggattggagagatcaatctctcc-ccacattaggtcaag-ttgga 44700496  T
Q  135 ccgaact 141  Q
    |||||||    
T  44700495 ccgaact 44700489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 51398848 - 51398972
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| | ||||||||||  |||||||||||||||||| | |||||||| | |||||||||||||| |||||||||||||| ||||    ||||||||     
T  51398848 ttgttcttagtgaacttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaactca-ttgatagtggattggagagatttatctctccc 51398945  T
Q  114 ccagagtaggtcaagtttggaccgaact 141  Q
    ||||| ||||||||| ||||||||||||    
T  51398946 ccagattaggtcaag-ttggaccgaact 51398972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 23392046 - 23391915
Alignment:
Q  13 agtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct 110  Q
    ||||||||| |||||| |||||  ||| |||||||||||||||  |||||||| |||| | |||||||| ||||||||||||||| ||||   |||||||    
T  23392046 agtttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcacttt-gcaagaactc-tttgatagtggattgtagagataaatctct 23391949  T
Q  111 cctccagagtaggtcaagtttggaccgaactgggt 145  Q
    || ||| | ||||||||| ||||||||||||||||    
T  23391948 cccccaaattaggtcaag-ttggaccgaactgggt 23391915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 32891137 - 32891264
Alignment:
Q  15 tttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| |||||||||| || |||||||||||| ||||   |||||||||    
T  32891137 tttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcgtt-gatagtggattggagagataaatctctcc 32891234  T
Q  113 tccagagtaggtcaagtttggaccgaactgg 143  Q
     || |||||||||| | ||||||||||||||    
T  32891235 cccggagtaggtcatg-ttggaccgaactgg 32891264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 5236590 - 5236463
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||| || |||||||| | |||||||||||||| |||||| ||||||  ||||  |||||| |||     
T  5236590 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaactca-ttgataatggattcgagagatcaatctttcc- 5236494  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| |||||||| |||||||| ||||||||    
T  5236493 ccagattaggtcaa-tttggaccaaactgggt 5236463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 27305777 - 27305719
Alignment:
Q  83 tgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactg 142  Q
    ||||||||||||| ||||  |||||||||||||| |||||||||| ||||||||||||||    
T  27305777 tgatagtggattggagagatcaatctctcctccaaagtaggtcaa-tttggaccgaactg 27305719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 47304340 - 47304413
Alignment:
Q  70 gtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||||||||| |||||||||||| ||||  |||||||||| | ||| |||||||||||| |||||||||||||    
T  47304340 gtaagaactcatt-gatagtggattggagagatcaatctctccccaagattaggtcaagttt-gaccgaactgggt 47304413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 2741 - 2496
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  2741 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 2642  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  2641 tccagagtaggtcaagtttggaccgaactgggtgaacaatctttttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgctttg 2544  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2543 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 2496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 9e-85; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 18392333 - 18392088
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  18392333 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 18392234  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  18392233 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgctttg 18392136  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18392135 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 18392088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 18388897 - 18388652
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  18388897 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 18388798  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   |||||||||||||||||||| |||  ||||||||||||| |||||||    
T  18388797 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctctttg--tatcttgtgattgttgctttg 18388700  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388699 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 18388652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 20343929 - 20344158
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20343929 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcct 20344028  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    ||||||||||||||| |||||||||||||||||||            ||  |||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  20344029 ccagagtaggtcaag-ttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctctcct--tttatcttgtgattgtgttttgtg 20344125  T
Q  202 tttcacacttgtttcctagattagatctaggtg 234  Q
    |||| ||||||||||||||||||||||||||||    
T  20344126 tttctcacttgtttcctagattagatctaggtg 20344158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 6594695 - 6594450
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  6594695 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaaactctcc 6594596  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   |||||||||||||||  |||||||||||||||||||||| |||||||    
T  6594595 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttcc--ctccttgtttatcttgtgattgttgctttg 6594498  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6594497 tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 6594450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 6592477 - 6592232
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  6592477 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaaactctcc 6592378  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||||         ||| |   |||||||||||||||  |||||||||| ||||||||||| |||||||    
T  6592377 tccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttcc--ctccttgtttttcttgtgattgttgctttg 6592280  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6592279 tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 6592232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 32060461 - 32060214
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatccc--ttttgtaa-gaactcatttgatagtggattgaagagtacaatctct 110  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||    
T  32060461 gtttgttcatagtgaacttgtcaagctaatttcttgtaacctcttgtatcccctttttgtaaagaactcatttgatagtggattggagagtacaatctct 32060362  T
Q  111 cctccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctt 197  Q
    ||||||||||||||||||||||||||||||| ||||||         ||| |   |||||||||||||||  |||||||||||||||||||||| |||||    
T  32060361 cctccagagtaggtcaagtttggaccgaacttggtgaacaatctctttgtgtttattgttttcttcttcc--ctccttgtttatcttgtgattgttgctt 32060264  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32060263 tgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 32060214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 59 - 247
Target Start/End: Complemental strand, 1560757 - 1560557
Alignment:
Q  59 gtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaa---------- 148  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |               
T  1560757 gtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtaaccaatctcttg 1560658  T
Q  149 -tgtatttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgt 246  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1560657 gtgtatttgttttcttcttccctctccttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgt 1560558  T
Q  247 t 247  Q
    |    
T  1560557 t 1560557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 24789873 - 24790074
Alignment:
Q  14 gtttgttcattgtgaacttgtcaa-gctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  24789873 gtttgttcattgtgaacttgtcaaagctaatttcttgtaacattttgtatcccttttgtaaaaactc-tttgatagtggattggagagtactatctctcc 24789971  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttg-ttttcttcttccctctccttgtttatcttgtgattgtgctttgt 200  Q
    ||||||||||||||||||||||||||||||||||||           ||| |||| |||||||||||||||||||  |||||||||||||||||| ||||    
T  24789972 tccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgtttttcttcttccctctcct--tttatcttgtgattgtgcattgt 24790069  T
Q  201 gtttc 205  Q
    |||||    
T  24790070 gtttc 24790074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 39731402 - 39731635
Alignment:
Q  16 ttgttcattgtgaacttgtca-agctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||| | ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  39731402 ttgttctttgtgaacttgtcagatctaatttcttgtaactcttttgtatctcttttgtaagaactcatt-gatagtggattggagagttcaatctctcct 39731500  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtt 203  Q
    |||||||||||||||||||||||||||||||||||          ||| ||||||||| |||||||||||||  ||||||||||| ||||| |||||| |    
T  39731501 ccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtggtttgtgct 39731598  T
Q  204 tcacac-ttgtttcctagattagatctaggtggtgtt 239  Q
    |  ||| ||||||||||||||||||||||||| ||||    
T  39731599 tttcactttgtttcctagattagatctaggtgttgtt 39731635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 35853948 - 35854080
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||| |||||||||||    
T  35853948 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagttcaatctctcct 35854045  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  35854046 ccagagtaggtcaagtttggaccgaactgggtgaa 35854080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 25767095 - 25766962
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| ||||||||||||||| |||||||||||||||||  ||||||||| |||||| ||||||||||| |||||||||||| ||||| ||||||||||    
T  25767095 ttgttctttgtgaacttgtcaaagctaatttcttgtaaccccttttgtatctcttttg-aagaactcatt-gatagtggattggagagttcaatctctcc 25766998  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||| ||||||||||||||||    
T  25766997 tccagagtaggtcaagtttagaccgaactgggtgaa 25766962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 43504290 - 43504063
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||  |||||||||||||||   ||||||||| |||||||||||||||||| ||||||| |||| ||||| ||||||||||    
T  43504290 ttgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaactcatt-gatagtgaattggagagttcaatctctcc 43504192  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||| ||||||||||||||||| |||||||||||||           ||| ||||||||| |||||||||||||  ||||||||||| ||||| ||| ||    
T  43504191 tccatagtaggtcaagtttggatcgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtgttttatg 43504094  T
Q  202 tttcacac-ttgtttcctagattagatctag 231  Q
     ||  ||| ||| ||||||||||||||||||    
T  43504093 cttttcactttgattcctagattagatctag 43504063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 23555074 - 23555206
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||| |||||||| | |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  23555074 ttgttctttgtgaacttgttgaagctaatttcttgtaacacttttgtacctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 23555171  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  23555172 ccagagtaggtcaagtttggaccgaactgggtgaa 23555206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 29991094 - 29991219
Alignment:
Q  23 ttgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagt 120  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||  ||| |||||||| |||||||||||| ||||  ||||||||||||||||||    
T  29991094 ttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttc-taataactcatt-gatagtggattggagagatcaatctctcctccagagt 29991191  T
Q  121 aggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||||||||||||    
T  29991192 aggtcaagtttggaccgaactgggtgaa 29991219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 34310850 - 34310718
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||| ||||  |||||||||||||||||| | ||||||||  ||||||||||||||||| |||||||||||| ||||  |||||||||||    
T  34310850 ttgttctttgtgaaattgttgaagctaatttcttgtaacacatttgtatct-ttttgtaagaactcatt-gatagtggattggagagatcaatctctcct 34310753  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  34310752 ccagagtaggtcaagtttggaccgaactgggtgaa 34310718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 48408836 - 48408970
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||| |||||||||| |||||||||||||||||  ||||||||| |||||| || |||||||| |||||||||||| |||||  |||||||||    
T  48408836 ttgttctttgtaaacttgtcaaagctaatttcttgtaaccccttttgtatctcttttgaaataactcatt-gatagtggattggagagtttaatctctcc 48408934  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||| ||||||||| ||||||||||||||||    
T  48408935 tccagagtatgtcaagtttagaccgaactgggtgaa 48408970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 19502219 - 19502344
Alignment:
Q  23 ttgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagt 120  Q
    |||||| |||||||| |||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||    
T  19502219 ttgtgagcttgtcaaagctaatttcttgtaactcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagt 19502316  T
Q  121 aggtcaagtttggaccgaactgggtgaa 148  Q
    | |||||||||||| |||| ||||||||    
T  19502317 aagtcaagtttggaacgaagtgggtgaa 19502344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 25615908 - 25616015
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  ||||||||  ||||||||||||||||| |||||||||||  ||||  ||||||||||||||||||||||||||||||||    
T  25615908 aagctaatttcttgtaacccatttgtatca-ttttgtaagaactcatt-gatagtggattagagagatcaatctctcctccagagtaggtcaagtttgga 25616005  T
Q  135 ccgaactggg 144  Q
    ||||||||||    
T  25616006 ccgaactggg 25616015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 32358167 - 32358057
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||| |||||    
T  32358167 aagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaag-ttgga 32358071  T
Q  135 ccgaactgggtgaa 148  Q
    ||||||||||||||    
T  32358070 ccgaactgggtgaa 32358057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 41317568 - 41317440
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||||| ||||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  41317568 ttgttctttgtgagcttgtcaaagctaatttcttgtaatccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 41317471  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  41317470 ccagattaggtcaag-ttggaccgaactgggt 41317440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 22270007 - 22270138
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||| ||| |||||||||||| ||||  |||||||||||    
T  22270007 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactgatt-gatagtggattggagagatcaatctctcct 22270104  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||||||||||||    
T  22270105 ccagagtaggtcaag-ttggaccgaactgggtgaa 22270138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 8359427 - 8359318
Alignment:
Q  39 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggacc 136  Q
    ||||||||||||||||  ||||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||   |||||||    
T  8359427 ctaatttcttgtaacccattttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcattgttggacc 8359330  T
Q  137 gaactgggtgaa 148  Q
    ||||||||||||    
T  8359329 gaactgggtgaa 8359318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 41649146 - 41649017
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||| |||||| |||||  ||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  ||||||||||    
T  41649146 gtttgttctttgtgagcttgtttagctaatttcttgtaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctcc 41649049  T
Q  113 tccagagtaggtcaagtttggaccgaactgggt 145  Q
     ||| | ||||||||| ||||||||||||||||    
T  41649048 cccaaattaggtcaag-ttggaccgaactgggt 41649017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 4178808 - 4178939
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||  || ||||||||||||||||| ||||||||| ||||   ||||||||||| |||||||||||||| ||| |||||||||||    
T  4178808 ttgttctttgtgaacttgggaaagctaatttcttgtaacccttttgtatctctttg--aagaactcatt-gatagtggattgaacagttcaatctctcct 4178904  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||| |||||||||||| ||| |||| ||||||    
T  4178905 ccagagcaggtcaagtttgaaccaaactaggtgaa 4178939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 14069967 - 14069839
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  14069967 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 14069870  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||| ||||||||| ||||||||||||||||    
T  14069869 caagattaggtcaag-ttggaccgaactgggt 14069839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 14379995 - 14379867
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  14379995 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 14379898  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||| ||||||||| ||||||||||||||||    
T  14379897 ctagattaggtcaag-ttggaccgaactgggt 14379867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 27347851 - 27347979
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  27347851 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattgcagagatcaatctctccc 27347948  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  27347949 ccagattaggtcaag-ttggaccgaactgggt 27347979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 30024866 - 30024740
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| |||||  |||||||||||||||||||  |||||||| |||| |||||||||| ||||||||||||||| ||||  ||||| ||||     
T  30024866 ttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc-tttgatagtggattggagagatcaatcactccc 30024769  T
Q  114 ccagagtaggtcaagtttggaccgaactgg 143  Q
    ||||||||||||||| ||||||||||||||    
T  30024768 ccagagtaggtcaag-ttggaccgaactgg 30024740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 6432005 - 6432134
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||||||||| || |||||||||||| ||||  |||||||||||    
T  6432005 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcgtt-gatagtggattggagagatcaatctctcct 6432102  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtg 146  Q
     |||||||||||||| |||||||||||||||||    
T  6432103 tcagagtaggtcaag-ttggaccgaactgggtg 6432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 2390316 - 2390448
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||| ||||||| | ||||||||||| ||||  |||||||||||    
T  2390316 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaataactcatat-atagtggattggagagatcaatctctcct 2390413  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaat 149  Q
    ||||||||||||||| |||||||||||| |||||||    
T  2390414 ccagagtaggtcaag-ttggaccgaactaggtgaat 2390448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 29608771 - 29608903
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||| |||   ||||| |||||    
T  29608771 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagatatcaatcactcct 29608868  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaat 149  Q
    ||||||||||||||| ||||||||||||| ||||||    
T  29608869 ccagagtaggtcaag-ttggaccgaactgagtgaat 29608903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 18126678 - 18126806
Alignment:
Q  16 ttgttcattgtgaacttgt-caagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||| ||||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||    ||||||||||     
T  18126678 ttgttctttgtgaacttgttcaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggaggaatcaatctctccc 18126775  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| |||||||||||| |||||| ||||||    
T  18126776 ccagactaggtcaagttt-gaccgacctgggt 18126806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 3259029 - 3259160
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||| ||||||| | |||||||| |||| |||| ||| |||| |||||||||||| ||||  |||||||||||    
T  3259029 ttgttctttgtgagcttgtttaagctaatttattgtaactcatttgtatctcttt-gtaaaaacccatt-gatagtggattggagagatcaatctctcct 3259126  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| ||| |||||||||||||||    
T  3259127 ccagagtaggtcaag-ttgaaccgaactgggtgaa 3259160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 48599468 - 48599337
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| | |||| |||||| |||||||||||| ||||  |||||||||||    
T  48599468 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgg-aagagctcatt-gatagtggattggagagatcaatctctcct 48599371  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||| || ||||| |||||||||||||||||||    
T  48599370 ccagagcagatcaag-ttggaccgaactgggtgaa 48599337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 4508819 - 4508709
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||| || ||||||||| ||||  |||||||| || |||||||||| ||||| |||    
T  4508819 aagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gagagtggattggagagatcaatctcttcttcagagtaggttaagtt-gga 4508723  T
Q  135 ccgaactgggtgaa 148  Q
    ||||||||||||||    
T  4508722 ccgaactgggtgaa 4508709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 4510661 - 4510551
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| ||||  |||||||||||| ||||||||||||||||   |||||||||||  ||||||||||||| |||||    
T  4510661 aagctaatttcttgtaacccatttgtatctcttta-taagaactcatt-gatagtggattgaagaaatcaatctctcctgtagagtaggtcaag-ttgga 4510565  T
Q  135 ccgaactgggtgaa 148  Q
    ||| ||||||||||    
T  4510564 ccgtactgggtgaa 4510551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 4512503 - 4512393
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| ||||  |||||||||||| ||||||||||||||||   |||||||||||  ||||||||||||| |||||    
T  4512503 aagctaatttcttgtaacccatttgtatctcttta-taagaactcatt-gatagtggattgaagaaatcaatctctcctgtagagtaggtcaag-ttgga 4512407  T
Q  135 ccgaactgggtgaa 148  Q
    ||| ||||||||||    
T  4512406 ccgtactgggtgaa 4512393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 48491613 - 48491727
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| | ||||||||||| |||||||||||| ||||  ||||||||||     
T  48491613 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gaaagaactcatt-gatagtggattggagagatcaatctctccc 48491710  T
Q  114 ccagagtaggtcaagtt 130  Q
    ||||| |||||||||||    
T  48491711 ccagattaggtcaagtt 48491727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 8153376 - 8153504
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||  ||||||| |||||||||||||||| | |||||||| |||| |||| |||||||| |||||||||||| ||||  ||||||||||     
T  8153376 ttgttctttgtgagattgtcaaagctaatttcttgtaactcatttgtatctcttt-gtaataactcatt-gatagtggattggagagatcaatctctccc 8153473  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| |||||| |||||||||    
T  8153474 ccagattaggtcaag-ttggactgaactgggt 8153504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 31733103 - 31732975
Alignment:
Q  16 ttgttcattgtgaacttg-tcaagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||| | |||||||||||||||||||  |||||||| |||| ||||||||||||| |||| ||||||| ||||  ||||||||||     
T  31733103 ttgttctttgtgagcttggtgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatactggattggagagatcaatctctccc 31733006  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||||||||| ||||||||||||||||    
T  31733005 ccaaattaggtcaag-ttggaccgaactgggt 31732975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 23565171 - 23565069
Alignment:
Q  39 ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||  | ||||||||||||| |||||| |    
T  23565171 ctaatttcttgtaactcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctctcctagagtaggtcaag-ttggactg 23565075  T
Q  138 aactgg 143  Q
    ||||||    
T  23565074 aactgg 23565069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 47674077 - 47673953
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  47674077 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcc- 47673981  T
Q  114 ccagagtaggtcaagtttggaccgaactg 142  Q
    ||| | || |||||| |||||||||||||    
T  47673980 ccatattaagtcaag-ttggaccgaactg 47673953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 2361106 - 2360978
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||  |||   ||||||||||     
T  2361106 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggatttgagatatcaatctctccc 2361009  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||| ||||||||||||    
T  2361008 ccagattaggtcaag-ttgaaccgaactgggt 2360978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 2759331 - 2759207
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||| | ||| |||| |||| ||||||||||||| |||||||||||| |||   |||||||| |     
T  2759331 ttgttctttgtgaacttgttgaagctaatttcttgtaactcatttatatctcttt-gtaagaactcatt-gatagtggattggagatatcaatctcttcc 2759234  T
Q  114 ccagagtaggtcaagtttggaccgaact 141  Q
    ||||| ||||||||| ||||||||||||    
T  2759233 ccagattaggtcaag-ttggaccgaact 2759207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 38671356 - 38671228
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||| ||||||| | |||||||| |||| ||||||||||||| |||||||||||||||||   ||||| |||     
T  38671356 ttgttctttgtgagcttgtttaagctaatttattgtaacacatttgtatcacttt-gtaagaactcatt-gatagtggattgaagagataaatctatccc 38671259  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||||||||| ||||||||||||||||    
T  38671258 ccaaaataggtcaag-ttggaccgaactgggt 38671228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 43864278 - 43864406
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||| |||||||  |||||||| |||| |||| |||| ||| |||||||||||| ||||  |||||||||      
T  43864278 ttgttctttgtgaacttgttgaagctaatttcctgtaacccatttgtatctcttt-gtaaaaactaatt-gatagtggattggagagatcaatctctctc 43864375  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  43864376 ccagattaggtcaag-ttggaccgaactgggt 43864406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 31105506 - 31105399
Alignment:
Q  36 aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||||||||||||| || ||||||| | ||||||||||||||| ||||| |||||||| ||||   ||||||||| | ||||||| ||||| |||||    
T  31105506 aagctaatttcttgtaacccatttgtat-ctttttgtaagaactca-ttgatggtggattggagagataaatctctccccaagagtagatcaag-ttgga 31105410  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  31105409 ccgaactgggt 31105399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 48489486 - 48489593
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| | || ||||||||  ||||||||||| ||||  |||||||||| ||||| ||||||||| |||||    
T  48489486 aagctaatttcttgtaacccatttgtatctcttt-gcaataactcattc-atagtggattggagagatcaatctctcccccagattaggtcaag-ttgga 48489582  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  48489583 ccgaactgggt 48489593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 4253665 - 4253538
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  ||||||||||| ||||||| |||| |||| |||| | ||||||||||| |||| ||||||  ||||  |||||||||    
T  4253665 gtttgttctttgtgagcttgttgaagctaatttcatgtaacccttttatatctctttggaaagaactcatt-gataatggattagagagatcaatctctc 4253567  T
Q  112 ctccagagtaggtcaagtttggaccgaact 141  Q
    |  ||||||||||||| |||||||||||||    
T  4253566 ccacagagtaggtcaa-tttggaccgaact 4253538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 47676270 - 47676144
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||| ||||  |||||||||||||||||||  |||||||| |||| ||||||||||| | ||||||||| || ||||  ||||||||||     
T  47676270 ttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcaat-gatagtggaatggagagatcaatctctccc 47676173  T
Q  114 ccagagtaggtcaagtttggaccgaactgg 143  Q
    ||| | ||||||||| ||||||||||||||    
T  47676172 ccatattaggtcaag-ttggaccgaactgg 47676144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 24790230 - 24790274
Alignment:
Q  201 gtttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||    
T  24790230 gtttctcacctgtttcctagattagatctaggtggtgttttgttg 24790274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 4586195 - 4586323
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||| ||||||||  ||| |||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  4586195 ttgttctttgtgaacttgttgaagctaattttttgtaacccatttttatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 4586292  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | || |||||  ||||||||||||||||    
T  4586293 ccatattatgtcaa-cttggaccgaactgggt 4586323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 1113691 - 1113807
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  ||||||||||||| |||||  |||||||| |||| ||||||||||||| |||||| ||||| ||||  ||||||||||     
T  1113691 ttgttctttgtgagcttgttgaagctaatttcttataacccatttgtatctcttt-gtaagaactcatt-gatagtagattggagagatcaatctctccc 1113788  T
Q  114 ccagagtaggtcaagtttg 132  Q
    ||| | |||||||||||||    
T  1113789 ccatattaggtcaagtttg 1113807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 1562141 - 1562103
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaa 52  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  1562141 gtttgttcatagtgaacttgtcaagctaatttcttgtaa 1562103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 6360065 - 6359958
Alignment:
Q  36 aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||||||||||||| || |||||||| | |||||||||||||| |||||||| ||||| ||||  |||||||| | ||| | ||||||||| |||||    
T  6360065 aagctaatttcttgtaacccatttgtatctc-tttgtaagaactca-ttgatagttgattggagagatcaatctcttccccatattaggtcaag-ttgga 6359969  T
Q  135 ccgaactgggt 145  Q
     ||||||||||    
T  6359968 tcgaactgggt 6359958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 18396384 - 18396481
Alignment:
Q  47 ttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||| ||||||||| ||||   ||||| ||||| ||||| |||||| ||||  |||||||||||| ||||||||||||   |||||||||||||||    
T  18396384 ttgtaacattttgtatctctttataaagaattcatt-gatagaggattggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggt 18396481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 24525584 - 24525508
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||||| |||||||||||| ||||  |||||||||| | ||| ||||||||| |||||| |||||||||    
T  24525584 tttgtaagaactcatt-gatagtggattggagagatcaatctctccccaagattaggtcaag-ttggacggaactgggt 24525508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 31518988 - 31519063
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctc-ctccagagtaggtcaagtttggaccgaactgg 143  Q
    |||||||||||||||| || ||||||||| ||||  ||||||||| | ||||||||||||||| ||||||||||||||    
T  31518988 tttgtaagaactcatt-gacagtggattggagagatcaatctctctccccagagtaggtcaag-ttggaccgaactgg 31519063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 496096 - 496003
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtt 130  Q
    |||||||||||||| ||||  |||||||| ||||  |||||||||||| |||||||||||| ||||  |||||||||| | | |||||||||||||    
T  496096 aagctaatttcttgcaacccatttgtatctcttta-taagaactcatt-gatagtggattggagagatcaatctctcccctatagtaggtcaagtt 496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 30814536 - 30814598
Alignment:
Q  82 ttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||| ||||  |||||||||| ||| | ||||||||| ||||||||||||||||    
T  30814536 ttgatagtggattggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggt 30814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 36146490 - 36146418
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaact 141  Q
    |||||||||||||||| |||||||||||  ||||  |||||||||| ||| | ||||||||| ||||||||||||    
T  36146490 tttgtaagaactcatt-gatagtggatttgagagatcaatctctcccccatattaggtcaag-ttggaccgaact 36146418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 8393426 - 8393671
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8393426 gtttgttcatagtgaacatgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcct 8393525  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttgt 200  Q
    |||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||| | | ||||||||||||| ||||||||    
T  8393526 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccat-tgtatcttgtgattgttgctttgt 8393624  T
Q  201 gtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  8393625 gtttcacacttggttcctagattagatctaggtggtgttttgttgtt 8393671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 8395635 - 8395880
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8395635 gtttgttcatagtgaacatgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcct 8395734  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttgt 200  Q
    |||||||||||||||||||||||||||||||||||         ||| |   ||||||||||||||||||||| | | ||||||||||||| ||||||||    
T  8395735 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccat-tgtatcttgtgattgttgctttgt 8395833  T
Q  201 gtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  8395834 gtttcacacttggttcctagattagatctaggtggtgttttgttgtt 8395880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 7124933 - 7125178
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  7124933 gtttgttcatagtgaacttgtcaaactaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 7125032  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||    ||||||||||||||||         ||| |   |||||||||||||||  |||||||||||||||||||||| |||||||    
T  7125033 tccagagtaggtcaagcaaagaccgaactgggtgaacaatctctttgtgtttattgttttcttcttcc--ctccttgtttatcttgtgattgttgctttg 7125130  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7125131 tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 7125178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 7122714 - 7122959
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  7122714 gtttgttcatagtgaacttgtcaaactaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaatctctcc 7122813  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa---------tgtat---ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    |||| |||||||||||    ||||||||||||||||         ||| |   |||||||||||||||  |||||||||||||||||||||| |||||||    
T  7122814 tccatagtaggtcaagcaaagaccgaactgggtgaacaatttctttgtgtttattgttttcttcttcc--ctccttgtttatcttgtgattgttgctttg 7122911  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7122912 tgtttcacacttggttcctagattagatctaggtggtgttttgttgtt 7122959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 5136095 - 5136341
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  5136095 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 5136194  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattgtgctt-- 197  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||| || || ||      
T  5136195 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtg-ttttggttgc 5136293  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgt 246  Q
    | ||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  5136294 tttgtttcacacttggttcctagattagatcta-gtgatgttttgttgt 5136341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 5138320 - 5138566
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  5138320 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 5138419  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattgtgctt-- 197  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||||||||||||| || || ||      
T  5138420 ctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtg-ttttggttgc 5138518  T
Q  198 tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgt 246  Q
    | ||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  5138519 tttgtttcacacttggttcctagattagatcta-gtgatgttttgttgt 5138566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 31495452 - 31495203
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||  |||||||||||||||   ||||||||| |||||||||||||||||| |||||| ||||| ||||| ||||||||||    
T  31495452 ttgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaactcatt-gatagttgattggagagttcaatctctcc 31495354  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctcctt------gtttatcttgtgattgtgc 195  Q
    ||||||||||||||||||||||||||||||||||||           ||| ||||||||| ||||||||||||||       ||||||||||| |||||     
T  31495353 tccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatccttttatcttgtgcttgtgt 31495254  T
Q  196 tttgtgtttcacac-ttgtttcctagattagatctaggtggtgttttgttg 245  Q
    ||| || ||  ||| ||||||||||||||||||||||||| ||||||||||    
T  31495253 tttatgcttttcactttgtttcctagattagatctaggtgctgttttgttg 31495203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 29999941 - 29999808
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||| |||||| |||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||| ||||  |||||||||||    
T  29999941 ttgttctttgtgaacatgtcaaagctaatttcttgtaactcttttgtatcttttttgtaagaactcatt-gatagtggattggagagatcaatctctcct 29999843  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  29999842 ccagagtaggtcaagtttggaccgaactgggtgaa 29999808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 56178771 - 56178639
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  56178771 ttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 56178674  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  56178673 ccagagtaggtcaagtttggaccgaactgggtgaa 56178639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 13992426 - 13992295
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||| |||  ||||||||||||| |||||||||||| ||||| |||||||||||    
T  13992426 ttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctctt--gtaagaactcatt-gatagtggattggagagttcaatctctcct 13992330  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||| ||||||    
T  13992329 ccagagtaggtcaagtttggaccgaactaggtgaa 13992295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 5370218 - 5370085
Alignment:
Q  16 ttgttcattgtgaacttgtcaa--gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||||||||||||  ||||||||||||||||| ||||||||| |||| ||||||||||||| ||||||||| |  ||||  ||||||||||    
T  5370218 ttgttctttgtgaacttgtcaaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggactagagagatcaatctctcc 5370121  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  5370120 tccagagtaggtcaagtttggaccgaactgagtgaa 5370085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 48143077 - 48143209
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||||||||| |||   |||||||||||| |||||||||||| ||||  |||||||||||    
T  48143077 ttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctcttca-taagaactcatt-gatagtggattggagagatcaatctctcct 48143174  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||||||| |||||||||||    
T  48143175 ccagagtaggtcaagtttggaccaaactgggtgaa 48143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 52095496 - 52095365
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| |||| ||||||| || ||||||||||||||| ||||  |||||||||||    
T  52095496 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaaatc-tttgatagtggattggagagatcaatctctcct 52095399  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||| ||||||||||||||||||||||||    
T  52095398 ccagagtagg-caagtttggaccgaactgggtgaa 52095365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 41964449 - 41964580
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  |||||||||| ||||||||  |||||||||||||| ||||||||||||| |||||||||||| ||||  ||||||||||    
T  41964449 ttgttctttgtgagcttgtttaagctaatttattgtaacccattttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctcc 41964546  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtga 147  Q
    |||||||||||||||| ||||||||||||||||||    
T  41964547 tccagagtaggtcaag-ttggaccgaactgggtga 41964580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 2209768 - 2209880
Alignment:
Q  36 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgg 133  Q
    |||||||||||||||||||  ||||||||| |||| ||||||||||||| |||||||||||| ||||   ||||||||||||||||||||||| | ||||    
T  2209768 aagctaatttcttgtaacccattttgtatctcttt-gtaagaactcatt-gatagtggattggagagattaatctctcctccagagtaggtcatggttgg 2209865  T
Q  134 accgaactgggtgaa 148  Q
    |||||||||||||||    
T  2209866 accgaactgggtgaa 2209880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 6655990 - 6656121
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||| |    
T  6655990 ttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcat 6656087  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||| ||||||||    
T  6656088 ccagagtaggtcaag-ttggaccgaattgggtgaa 6656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 50673960 - 50673850
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||| |||||    
T  50673960 aagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaag-ttgga 50673864  T
Q  135 ccgaactgggtgaa 148  Q
    ||||||| ||||||    
T  50673863 ccgaactaggtgaa 50673850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 46703534 - 46703667
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| |||||| |||||  |||||||||||||||||||  ||||||||| |||| |||||||||||||| ||||||||||| ||||  ||||||||||    
T  46703534 ttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaagaactcattt-atagtggattggagagatcaatctctcc 46703631  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||   |||||||||| ||||||||    
T  46703632 tccagagtaggtcattgttggaccgaattgggtgaa 46703667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 12744059 - 12743931
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  12744059 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 12743962  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||||||||| ||||||||||||||||    
T  12743961 ccatattaggtcaag-ttggaccgaactgggt 12743931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 12745448 - 12745320
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  12745448 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 12745351  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||||||||| ||||||||||||||||    
T  12745350 ccatattaggtcaag-ttggaccgaactgggt 12745320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 379412 - 379546
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||| ||| |||||||||||| ||||  |||||||||    
T  379412 gtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgcttt-gtaagaactaatt-gatagtggattggagagatcaatctctc 379509  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||   |||||||||||||| ||||    
T  379510 ctccagagtaggtcattgttggaccgaactggatgaa 379546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 9927592 - 9927467
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  9927592 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 9927495  T
Q  114 ccagagtaggtcaagtttggaccgaactg 142  Q
    ||||| ||||||||| |||||||||||||    
T  9927494 ccagattaggtcaag-ttggaccgaactg 9927467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 8665463 - 8665556
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtt 130  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||    
T  8665463 aagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 8665556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 12739684 - 12739556
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||||  ||||||||  ||| ||| ||||||||| |||||||||||| ||||  ||||||||||     
T  12739684 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctattt-gtatgaactcatt-gatagtggattggagagatcaatctctccc 12739587  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  12739586 ccagattaggtcaag-ttggaccgaactgggt 12739556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 40632479 - 40632607
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  40632479 ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 40632576  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    | | |||| |||||| ||||||||||||||||    
T  40632577 ctaaagtaagtcaag-ttggaccgaactgggt 40632607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 8648173 - 8648304
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||  ||||  ||||||||||||| |||||  |||||||| |||| ||||||||||||| |||| ||||||| ||||  |||||||||||    
T  8648173 ttgttcattgtgagtttgttgaagctaatttcttataacccatttgtatctcttt-gtaagaactcatt-gatattggattggagagatcaatctctcct 8648270  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| ||||||| |||||||||||    
T  8648271 ccagagtaggtcaag-ttggaccaaactgggtgaa 8648304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 36463522 - 36463395
Alignment:
Q  17 tgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctc 114  Q
    |||||||||||| |||||  |||||||||||||||||||  |||||||| |||| |||||||||| ||||| ||||||||| ||||  |||||||||| |    
T  36463522 tgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc-tttgacagtggattggagagatcaatctctcccc 36463425  T
Q  115 cagagtaggtcaagtttggaccgaactgggt 145  Q
    |||| ||||||||| ||||||||||||||||    
T  36463424 cagattaggtcaag-ttggaccgaactgggt 36463395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 41639460 - 41639591
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||| |  |||||||||||||||||||  ||||||||  ||| ||||||||||||  |||||||||||| ||||  |||||||||||    
T  41639460 ttgttctttgtgaactttttgaagctaatttcttgtaacccatttgtatctattt-gtaagaactcatc-gatagtggattggagagatcaatctctcct 41639557  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| ||||||||||||| |||||    
T  41639558 ccagagtaggtcaag-ttggaccgaactgagtgaa 41639591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 48893751 - 48893644
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| |||| |||||||||| ||||||||||||||| ||||  |||||||||| ||||| ||||||||| |||||    
T  48893751 aagctaatttcttgtaactcatttgtatctcttt-gtaagaactc-tttgatagtggattggagagatcaatctctcccccagattaggtcaag-ttgga 48893655  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  48893654 ccgaactgggt 48893644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 12073424 - 12073558
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||| ||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  12073424 gtttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctc 12073521  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
     ||||||||||||||   |||||||||||| ||||||    
T  12073522 ttccagagtaggtcattgttggaccgaactaggtgaa 12073558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 37740659 - 37740784
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  37740659 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 37740756  T
Q  114 ccagagtaggtcaagtttggaccgaactg 142  Q
    ||||| | ||||||| |||||||||||||    
T  37740757 ccagatttggtcaag-ttggaccgaactg 37740784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 26175746 - 26175642
Alignment:
Q  39 ctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    ||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||| ||||| ||||||||| ||||||||    
T  26175746 ctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccg 26175650  T
Q  138 aactgggt 145  Q
    ||||||||    
T  26175649 aactgggt 26175642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 26364270 - 26364398
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||| | |||||||| |||| |||||||||||||  ||||||||||| ||||  ||||||||||     
T  26364270 ttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatta-atagtggattggagagatcaatctctccc 26364367  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| |||||||||||| ||| |||||||||    
T  26364368 ccagattaggtcaagttt-gactgaactgggt 26364398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 35662496 - 35662600
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||  |||| ||||||| ||||||||||||| |||||    
T  35662496 aagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatatctcctcaagagtaggtcaag-ttgga 35662592  T
Q  135 ccgaactg 142  Q
    ||||||||    
T  35662593 ccgaactg 35662600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 36994558 - 36994686
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  36994558 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 36994655  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||| ||||| ||||||||||||||||    
T  36994656 ccatattagatcaag-ttggaccgaactgggt 36994686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 46147525 - 46147397
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| |||||  |||||||||||||||||| | |||||||| |||| |||||||||| ||||||||||||||| |||   ||||||||||     
T  46147525 ttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc-tttgatagtggattggagacatcaatctctccc 46147428  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||| | ||||||||| ||||||||||||||||    
T  46147427 ccaaattaggtcaag-ttggaccgaactgggt 46147397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 4588014 - 4588121
Alignment:
Q  36 aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| |||| ||||||||||| ||| | ||||| ||| |||||    
T  4588014 aagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagaacaatctctcccccataataggtgaag-ttgga 4588110  T
Q  135 ccgaactgggt 145  Q
    || ||||||||    
T  4588111 ccaaactgggt 4588121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 47038544 - 47038417
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctc 114  Q
    |||||| |||||| |||||  ||||||||||||||||| | ||||||||  ||| ||||| ||||||| |||||||||||| ||||  |||||||||| |    
T  47038544 ttgttctttgtgagcttgttgaagctaatttcttgtaatcatttgtatctgttt-gtaaggactcatt-gatagtggattggagagatcaatctctcccc 47038447  T
Q  115 cagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||| |||||| ||||||||||||||||    
T  47038446 cagagtaagtcaag-ttggaccgaactgggt 47038417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 50262835 - 50262703
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||| ||||| |||   |||||| ||||    
T  50262835 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagttgattggagatatcaatctttcct 50262738  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||   |||||||||||||||||||    
T  50262737 ccagagtaggtcattgttggaccgaactgggtgaa 50262703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 54883075 - 54883182
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| || |  |||||||||||||||| || |||||| |||||    
T  54883075 aagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagggatcaatctctcctccagattaagtcaag-ttgga 54883171  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  54883172 ccgaactgggt 54883182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 6542314 - 6542185
Alignment:
Q  15 tttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||| |||||| |||||  || |||||||||||| | ||||||||||| |||| |||||||||| || |||||||||||| ||||  ||||||||||    
T  6542314 tttgttctttgtgagcttgttgaaactaatttcttgttagccttttgtatctcttt-gtaagaactcgtt-gatagtggattggagagatcaatctctcc 6542217  T
Q  113 tccagagtaggtcaagtttggaccgaactgggt 145  Q
     |||| |||||||||| ||||||||||||||||    
T  6542216 cccagggtaggtcaag-ttggaccgaactgggt 6542185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 12119571 - 12119705
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||||||| |  ||||||||||||||||| ||||||||||| ||||   |||||||||||| ||||||||||| ||||  |||||||||    
T  12119571 gtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattt-atagtggattggagagatcaatctctc 12119669  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | | |||||||||||   |||||||||||| ||||||    
T  12119670 c-caagagtaggtcattgttggaccgaactaggtgaa 12119705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 27417099 - 27416974
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||| |||||||| |||||||||||| ||||  ||||||||||     
T  27417099 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaaaaactcatt-gatagtggattggagagatcaatctctccc 27417002  T
Q  114 ccagagtaggtcaagtttggaccgaactg 142  Q
    ||||| ||||||||| |||||||||||||    
T  27417001 ccagattaggtcaag-ttggaccgaactg 27416974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 34570548 - 34570420
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||   ||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  34570548 ttgttctttgtgaacttgttgaagctaatttcttgtaacccaattgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 34570451  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||| ||| ||||| ||||||||||    
T  34570450 ccagattaggttaag-ttggatcgaactgggt 34570420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 5429734 - 5429841
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  ||||||||  ||| ||||||||||||| |||||||||||| ||||  |||||||||| ||||| ||||| ||| |||||    
T  5429734 aagctaatttcttgtaacccatttgtatctattt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccagattaggttaag-ttgga 5429830  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  5429831 ccgaactgggt 5429841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 31474206 - 31474313
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| | |||||||||||||| |||||||| ||||| ||||   ||||||||| ||||||||| ||||| |||||    
T  31474206 aagctaatttcttgtaactcatttgtatctc-tttgtaagaactca-ttgatagttgattggagagataaatctctccaccagagtagatcaag-ttgga 31474302  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  31474303 ccgaactgggt 31474313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 26699579 - 26699447
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||||||||||||| |||||||||| ||||   |||||||||||| ||| ||||||| ||||  ||||||||     
T  26699579 gtttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcattt-ataatggattggagagatcaatctcta 26699481  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
      |||||||||||||   ||||||||||||||||    
T  26699480 tcccagagtaggtcattgttggaccgaactgggt 26699447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 12744181 - 12744087
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct 110  Q
    |||||| ||||||||||||||| ||||||||||||||| || |||||||| | |||||||||||||| |||||||||||||| ||||  ||||||||    
T  12744181 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaactca-ttgatagtggattggagagatcaatctct 12744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 45687317 - 45687188
Alignment:
Q  15 tttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||| |||||| |||||||| ||||||||||| |||| | ||||||||  ||| ||||||||||||| |||||||||||| ||||  | ||||||||    
T  45687317 tttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatctattt-gtaagaactcatt-gatagtggattggagagatctatctctcc 45687220  T
Q  113 tccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||| | || |||||| ||||||||||||||||    
T  45687219 tccatattatgtcaag-ttggaccgaactgggt 45687188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 5871852 - 5871982
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||| ||||||||||||||  ||| |||| |||| | |||||||| ||||||||||||||  ||||  |||||||||    
T  5871852 gtttgttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcacttt-gcaagaactc-tttgatagtggattagagagatcaatctctc 5871949  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||||| |||||||||||| |||||||||||||    
T  5871950 ccccagattaggtcaagttt-gaccgaactgggt 5871982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 52467490 - 52467360
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  |||||||| ||||||||||  |||||||| |||| |||| ||||  ||||||||||||||| ||||  |||||||||    
T  52467490 gtttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcacttt-gtaataactt-tttgatagtggattggagagatcaatctctc 52467393  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | | ||| ||||||||| ||||||||||||||||    
T  52467392 cccgagattaggtcaag-ttggaccgaactgggt 52467360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 12745570 - 12745476
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct 110  Q
    |||||| ||||||||||||| || |||||||||||||| || |||||||| | |||||||||||||| |||||||||||||| ||||  ||||||||    
T  12745570 ttgttctttgtgaacttgtcaaaactaatttcttgtaacccatttgtatctc-tttgtaagaactca-ttgatagtggattggagagatcaatctct 12745476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 54200040 - 54199926
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||| || |||||||| | |||||||||||||| ||||||||| |||  ||||  || |||||||     
T  54200040 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaactca-ttgatagtgaattagagagatcattctctccc 54199943  T
Q  114 ccagagtaggtcaagtt 130  Q
    ||||| |||||||||||    
T  54199942 ccagattaggtcaagtt 54199926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 12747890 - 12747794
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| ||||||||||||||| |||||||||||||||||  ||||||||  ||| ||| ||||||||| |||||||||||| ||||  ||||||||||    
T  12747890 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctattt-gtatgaactcatt-gatagtggattggagagatcaatctctcc 12747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 13009536 - 13009464
Alignment:
Q  56 tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtt 130  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||  | |||||||||||| | |||||||||||    
T  13009536 tttgtatcccttt-gtaagaactcatt-gatagtggattggagagatcgatctctcctccaaattaggtcaagtt 13009464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 37229803 - 37229731
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaact 141  Q
    ||||||||||||||||| ||||||||||| ||||  ||||||||||  || ||||||||||| ||||||||||||    
T  37229803 tttgtaagaactcattt-atagtggattggagagatcaatctctccctcatagtaggtcaag-ttggaccgaact 37229731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 5207978 - 5207848
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaaccttttgtatccct-tttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| ||||||||||||  |||||||||| ||| |||| || ||||  || |||||||||||||||| |||||||||||| | ||  |||||||||    
T  5207978 gtttgttctttgtgaacttgttgaagctaatttattgcaaccctt-gtatatctatttgtaagaactcatt-gatagtggattggaaagatcaatctctc 5207881  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
      |||||||||||||| ||||||| ||| |||||    
T  5207880 tcccagagtaggtcaa-tttggactgaattgggt 5207848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 52082791 - 52082666
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||||||  ||||||||||||||||  |||||||| |||| ||||||| || ||||||||||||       |  || ||||||||    
T  52082791 ttgttctttgtgaacttgtcaaaactaatttcttgtaacccatttgtatctcttt-gtaagaaatc-tttgatagtgga-------gatcattctctcct 52082701  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||| ||||||  ||||||||    
T  52082700 ccagagtaggtcaagtttagaccgatttgggtgaa 52082666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 29254580 - 29254656
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||||||||| || |||||||||||| ||||  |||||||||  ||| | ||||||||| ||||||||||||||||    
T  29254580 tttgtaagaactcgtt-gatagtggattggagagatcaatctctctcccaaattaggtcaag-ttggaccgaactgggt 29254656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 145
Target Start/End: Original strand, 51337137 - 51337226
Alignment:
Q  53 ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||||||||| ||||| |||||||||||| ||||||| |||  ||||  ||||||||||  || | ||||||||||| ||||||||||||||    
T  51337137 ccttttgtatctctttt-taagaactcatt-gatagtgtattagagagatcaatctctcccacacattaggtcaagtt-ggaccgaactgggt 51337226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 25689987 - 25690228
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  25689987 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaaactctcct 25690085  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgtgctttgt 200  Q
    |||||||||||||||||||||||||||||||||||            ||| | |||||||||||||||||| |||  |||||||||||| |||| |||||    
T  25690086 ccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtttgttgttttcttcttccctcccct--tttatcttgtgagtgtgttttgt 25690183  T
Q  201 gtttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  25690184 gtttctcacttgtttcctagattagatctaggtggtgttttgttg 25690228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 3439536 - 3439776
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  3439536 gtttgttcattatgaacttggcaagctaatttcttgtaaccttttgtatcccttttgtaagaactc-tttgatagtggattggagagtacaatctctcct 3439634  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    |||||||||||||||||||||||||||||| ||||            ||  |||||||||||||||||||||||  ||||||||||||||||| |||| |    
T  3439635 ccagagtaggtcaagtttggaccgaactggatgaacaatctctttggtgcttttgttttcttcttccctctcct--tttatcttgtgattgtgttttgag 3439732  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgttttgttg 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  3439733 tttctcacttgtttcctagattagatctaggtggtgttttgttg 3439776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 15290554 - 15290800
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  15290554 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 15290653  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattg-tgcttt 198  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||  ||||||||||||| ||||||    
T  15290654 ctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgcttt 15290751  T
Q  199 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  15290752 gtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtt 15290800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 15470923 - 15471169
Alignment:
Q  14 gtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  15470923 gtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctc 15471022  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattg-tgcttt 198  Q
    |||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||  ||||||||||||| ||||||    
T  15471023 ctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgcttt 15471120  T
Q  199 gtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  15471121 gtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtt 15471169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 42575460 - 42575217
Alignment:
Q  16 ttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  42575460 ttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcct 42575361  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattg--tgctttg 199  Q
    |||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||  ||||||||| |||  |||||      
T  42575360 ccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgtttggttgctt-- 42575265  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  42575264 tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtt 42575217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 2627768 - 2628002
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    ||||||||||||||||||||||  ||||||||||| |||   ||||||||| ||| |||||||||||||| |||||||||||| ||||| ||||||||||    
T  2627768 ttgttcattgtgaacttgtcaaatctaatttcttgcaactctttttgtatctcttgtgtaagaactcatt-gatagtggattggagagttcaatctctcc 2627866  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtg 201  Q
    ||||||||||||||||||||||||||||||||||||           ||| ||||||||| |||||||||||||  ||||||||||| ||||| ||| ||    
T  2627867 tccagagtaggtcaagtttggaccgaactgggtgaataatctcttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtgttttatg 2627964  T
Q  202 tttcacacttgtttcctagattagatctaggtggtgtt 239  Q
     ||  |||||||||||||||||||||||||||| ||||    
T  2627965 cttttcacttgtttcctagattagatctaggtgttgtt 2628002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 17982687 - 17982819
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| | ||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||| ||||| |||||||||||    
T  17982687 ttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttgg-aagaactcatt-gatagtggattggagagttcaatctctcct 17982784  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  17982785 ccagagtaggtcaagtttggaccgaactgggtgaa 17982819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 31218291 - 31218423
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||  ||||| |||||||||||    
T  31218291 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgg-aagaactcatt-gatagtggattagagagttcaatctctcct 31218388  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  31218389 ccagagtaggtcaagtttggaccgaactgggtgaa 31218423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 44303889 - 44304021
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||| ||||| |||||||||||    
T  44303889 ttgttctttgtgaacttgtcaaagctaatttcttgtaatccttttgtatctctttt-taagaactcatt-gatagtggattggagagttcaatctctcct 44303986  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||||||||| |||||| ||||||    
T  44303987 ccagagtaggtcaagtttggatcgaactaggtgaa 44304021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 1746352 - 1746221
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||   ||||||||||| |||||||||||| ||||| |||||||||||    
T  1746352 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg--aagaactcatt-gatagtggattggagagttcaatctctcct 1746256  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| |||||||||||||||||||||||||||||||    
T  1746255 ccatagtaggtcaagtttggaccgaactgggtgaa 1746221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 34256641 - 34256509
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| | ||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  34256641 ttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 34256544  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | |||||||||||||||||||||||||||||||||    
T  34256543 ctagagtaggtcaagtttggaccgaactgggtgaa 34256509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 42498228 - 42498360
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||||||||  |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  42498228 ttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 42498325  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  42498326 ccagagtaggtcaagtttggaccgaactgggtgaa 42498360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 19945494 - 19945361
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| ||||||||||||||| |||||||||||||||||  ||||||||| |||| | ||||||||||| |||||||||||| ||||| ||||||||||    
T  19945494 ttgttctttgtgaacttgtcaaagctaatttcttgtaaccacttttgtatctctttgg-aagaactcatt-gatagtggattggagagttcaatctctcc 19945397  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    || ||||||||||||||||| |||||||||||||||    
T  19945396 tcgagagtaggtcaagtttgaaccgaactgggtgaa 19945361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 34254465 - 34254333
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| | ||||||||||||||| ||||||||| |||| ||||||||| ||| |||||||||||| ||||  |||||||||||    
T  34254465 ttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctcttt-gtaagaacttatt-gatagtggattggagagatcaatctctcct 34254368  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | |||||||||||||||||||||||||||||||||    
T  34254367 ctagagtaggtcaagtttggaccgaactgggtgaa 34254333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 42435125 - 42434994
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| |||   |||||||||||    
T  42435125 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagaaatcaatctctcct 42435028  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||||||| |||||||||||||||||||    
T  42435027 ccagagtaggtcaag-ttggaccgaactgggtgaa 42434994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 3303807 - 3303676
Alignment:
Q  13 agtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct 110  Q
    ||||||||| |||||| |||||  || ||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||||||||  ||||||||    
T  3303807 agtttgttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattgaagagatcaatctct 3303710  T
Q  111 cctccagagtaggtcaagtttggaccgaactgggt 145  Q
    || ||| ||||||||||| ||||||||||||||||    
T  3303709 cccccacagtaggtcaag-ttggaccgaactgggt 3303676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 18655434 - 18655565
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||  ||||  |||||||||||    
T  18655434 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattagagagatcaatctctcct 18655531  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||| ||||||||||| |||||||||||||||||||    
T  18655532 ccaaagtaggtcaag-ttggaccgaactgggtgaa 18655565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 4283579 - 4283689
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||| |||| ||||||||||||| |||||    
T  4283579 aagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctcccctctagagtaggtcaag-ttgga 4283675  T
Q  135 ccgaactgggtgaa 148  Q
    ||||||||||||||    
T  4283676 ccgaactgggtgaa 4283689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 15212820 - 15212948
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||| ||||||| ||||  ||||||||||     
T  15212820 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gataatggattggagagatcaatctctccc 15212917  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  15212918 ccagattaggtcaag-ttggaccgaactgggt 15212948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 27811312 - 27811440
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||||||| |||| |||||||||||||||||  ||||||||||     
T  27811312 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaacccatt-gatagtggattgaagagatcaatctctccc 27811409  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  27811410 ccagattaggtcaag-ttggaccgaactgggt 27811440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 33352184 - 33352312
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  || ||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  33352184 ttgttctttgtgaacttgttgaacctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 33352281  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  33352282 ccagattaggtcaag-ttggaccgaactgggt 33352312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 5689312 - 5689433
Alignment:
Q  23 ttgtgaacttgtcaa-gctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagt 120  Q
    |||||| |||||||| |||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||| ||||| |    
T  5689312 ttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcccccagatt 5689409  T
Q  121 aggtcaagtttggaccgaactgggt 145  Q
     ||||||| ||||||||||||||||    
T  5689410 tggtcaag-ttggaccgaactgggt 5689433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 1345484 - 1345391
Alignment:
Q  36 aagctaatttcttgtaaccttt-tgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtt 130  Q
    |||||||||||||||||||  | |||||| |||| | ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||    
T  1345484 aagctaatttcttgtaacccatatgtatctcttt-gaaagaactcatt-gatagtggattgaagagttcaatctctcccccagagtaggtcaagtt 1345391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 12702768 - 12702640
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  ||||||||||||||||||| |||||| || |||| ||||||||||||| |||| ||||||| ||||  ||||||||||     
T  12702768 ttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtgtctcttt-gtaagaactcatt-gatattggattggagagatcaatctctccc 12702671  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||| ||||||||| ||||||||||||||||    
T  12702670 ctagattaggtcaag-ttggaccgaactgggt 12702640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 43036457 - 43036585
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||  || ||||||||||||||  | |||||||| |||| ||||||||||||| |||||||||||  ||||  |||||||||||    
T  43036457 ttgttctttgtgaacttgttgaaactaatttcttgtaattcatttgtatctcttt-gtaagaactcatt-gatagtggatttgagagatcaatctctcct 43036554  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  43036555 ccagattaggtcaag-ttggaccgaactgggt 43036585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 41366727 - 41366622
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||| ||||  |||||||||| | ||| ||||||||| |||||    
T  41366727 aagctaatttcttttaacctatttgtatcccttt-gtaagaactcattt-atagtggattggagagatcaatctctcc-ctagattaggtcaag-ttgga 41366632  T
Q  135 ccgaactggg 144  Q
    ||||||||||    
T  41366631 ccgaactggg 41366622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 4743306 - 4743220
Alignment:
Q  57 ttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||| |||||||||||||||| |||||||||||| ||||  |||||||||| ||| ||||||||||| ||||||||||||||||    
T  4743306 ttgtaacccatttgtaagaactcatt-gatagtggattggagagatcaatctctcccccaaagtaggtcaag-ttggaccgaactgggt 4743220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 40221803 - 40221907
Alignment:
Q  39 ctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    ||||||||||||||||  |||||||| |||| |||||||||| || |||||||||||| ||||  |||||||||| ||||| ||||||||| ||||||||    
T  40221803 ctaatttcttgtaacccatttgtatctcttt-gtaagaactcgtt-gatagtggattggagagatcaatctctcccccagattaggtcaag-ttggaccg 40221899  T
Q  138 aactgggt 145  Q
    ||||||||    
T  40221900 aactgggt 40221907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 40321114 - 40321242
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacctttt-gtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| |||||  ||| |||||||||||||||  || ||||| |||| |||| ||||| ||||||||||||||| ||||  ||||||||||     
T  40321114 ttgttcattgtgagcttgttgaagttaatttcttgtaacccattagtatctcttt-gtaaaaactc-tttgatagtggattggagagatcaatctctccc 40321211  T
Q  114 ccagagtaggtcaagtttggaccgaactgggt 145  Q
    ||||| ||||||||| ||||||||||||||||    
T  40321212 ccagattaggtcaag-ttggaccgaactgggt 40321242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 6599027 - 6599134
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  ||||||| | ||||||||||||||||| |||||||||||  ||||  |||||||||| ||| | ||||||||| |||||    
T  6599027 aagctaatttcttgtaacccatttgtatac-ttttgtaagaactcatt-gatagtggattagagagatcaatctctcccccatattaggtcaag-ttgga 6599123  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  6599124 ccgaactgggt 6599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 6674480 - 6674587
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  ||||||| | ||||||||||||||||| |||||||||||  ||||  |||||||||| ||| | ||||||||| |||||    
T  6674480 aagctaatttcttgtaacccatttgtatac-ttttgtaagaactcatt-gatagtggattagagagatcaatctctcccccatattaggtcaag-ttgga 6674576  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  6674577 ccgaactgggt 6674587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 10930312 - 10930205
Alignment:
Q  36 aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||||  ||| |||| |||| |||||||| |||| |||||||||||| ||||  |||||||||| ||||| ||||||||| |||||    
T  10930312 aagctaatttcttgtaacccatttatatctcttt-gtaagaacacatt-gatagtggattggagagatcaatctctcccccagattaggtcaag-ttgga 10930216  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  10930215 ccgaactgggt 10930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 18141854 - 18141981
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| |||||||||| ||||||||||||||| ||||  ||||||||||     
T  18141854 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcacttt-gtaagaactc-tttgatagtggattggagagatcaatctctccc 18141951  T
Q  114 ccagagtaggtcaagtttggaccgaactggg 144  Q
    | ||| ||||||||| ||||||| |||||||    
T  18141952 ctagattaggtcaag-ttggaccaaactggg 18141981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 40328811 - 40328922
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct 110  Q
    |||||||| |||||| |||||  || |||||||||||||||   ||||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||    
T  40328811 gtttgttctttgtgagcttgtttaaactaatttcttgtaactcattttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctct 40328908  T
Q  111 cctccagagtaggt 124  Q
    ||||||||||||||    
T  40328909 cctccagagtaggt 40328922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 1292600 - 1292471
Alignment:
Q  13 agtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct 110  Q
    ||||||||| |||||| |||||  |||||||||||||||||| | |||||||| | |||||||||||||| |||||||||||||  |||    |||||||    
T  1292600 agtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaactca-ttgatagtggatttgagaaataaatctct 1292503  T
Q  111 cctccagagtaggtcaagtttggaccgaactggg 144  Q
    || ||||||||||||||| |||||||||||||||    
T  1292502 cc-ccagagtaggtcaag-ttggaccgaactggg 1292471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 11384040 - 11384150
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| |||| |||||||| |||| |||| ||||||| |||   | |||||||||||||||||||| ||| |||||    
T  11384040 aagctaatttcttgtaactcatttgtatctcttt-gtaagaacccatt-gatactggattggagacatcgatctctcctccagagtaggttaag-ttgga 11384136  T
Q  135 ccgaactgggtgaa 148  Q
    ||||||||||||||    
T  11384137 ccgaactgggtgaa 11384150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 30143374 - 30143488
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  ||||||||||     
T  30143374 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctccc 30143471  T
Q  114 ccagagtaggtcaagtt 130  Q
    |||||  ||||||||||    
T  30143472 ccagataaggtcaagtt 30143488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 44353827 - 44353923
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||| ||||||||||||  |||||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||||| ||  ||||||||||    
T  44353827 ttgttctttgtgaacttgttgaagctaatttcttgtaacacatttgtatctcttt-gtaagaactcatt-gatagtggattgaaaagatcaatctctcc 44353923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 4162529 - 4162658
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| ||| ||||||||  |||||||||||||||||| | |||||||| |||| ||||||||||||| ||||| |||||| |||   |||||||||    
T  4162529 gtttgttctttgagaacttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatag-ggattggagatatcaatctctc 4162625  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | | ||||||||||||| |||||||||| |||||    
T  4162626 cccaagagtaggtcaag-ttggaccgaattgggt 4162658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 18106191 - 18106082
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | ||||||||  ||||||||||||||| |||||||| | ||| ||||  |||||||||| ||||| ||||||||| |||||    
T  18106191 aagctaatttcttgtaactcatttgtatc--ttttgtaagaactca-ttgatagt-gtttggagagatcaatctctcc-ccagaataggtcaag-ttgga 18106098  T
Q  135 ccgaactgggtgaatg 150  Q
    ||||||||||| ||||    
T  18106097 ccgaactgggtcaatg 18106082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 4731716 - 4731820
Alignment:
Q  39 ctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    ||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| ||||  | |||||||| ||||| | ||||||| ||||||||    
T  4731716 ctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcgatctctcccccagattcggtcaag-ttggaccg 4731812  T
Q  138 aactgggt 145  Q
    || |||||    
T  4731813 aattgggt 4731820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 10015136 - 10015241
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| ||||  || ||||||| |||||||||||||| ||||   ||||||| ||||| ||||||||||| |||||    
T  10015136 aagctaatttcttgtaactcatttgtatctcttt--taggaactca-ttgatagtggattggagagataaatctct-ctccatagtaggtcaag-ttgga 10015230  T
Q  135 ccgaactgggt 145  Q
    |||||||||||    
T  10015231 ccgaactgggt 10015241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 4733792 - 4733868
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||| ||||| |||||||||||| ||||  | |||||||| ||||| ||||||||| ||||||||||||||||    
T  4733792 tttgtaagaattcatt-gatagtggattggagagatcgatctctcccccagattaggtcaag-ttggaccgaactgggt 4733868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 30291640 - 30291767
Alignment:
Q  15 tttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctct-c 111  Q
    ||||||| |||||| |||||  |||||||||||||||||| | |||||||| |||| ||||||| || ||||||||||||||| ||||  |||||||| |    
T  30291640 tttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt-gtaagaattc-tttgatagtggattggagagatcaatctctcc 30291737  T
Q  112 ctccagagtaggtcaagtttggaccgaactg 142  Q
    ||||||| || | |||| |||||||||||||    
T  30291738 ctccagattatgccaag-ttggaccgaactg 30291767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 9765779 - 9765863
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagag 100  Q
    |||||| |||||| |||| ||| ||||||||||||||| || |||||||| | |||||||||||||| |||||||||||||| ||||    
T  9765779 ttgttctttgtgagcttggcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaactca-ttgatagtggattggagag 9765863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 19491835 - 19491723
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||| |||||| |||||  || ||||||||||||||||  |||||||| |||| |||||||||| || ||||||||||| |||||  |||| ||||    
T  19491835 gtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt-gtaagaactcgtt-gatagtggattaaagagatcaatatctc 19491738  T
Q  112 ctccagagtaggtca 126  Q
    | ||| |||||||||    
T  19491737 ccccatagtaggtca 19491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 3073981 - 3073880
Alignment:
Q  41 aatttcttgtaacctttt-gtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaa 139  Q
    ||||||||||||| |||| ||||| |||| ||||||||||| |||||| ||| ||| ||||  |||||||||| ||| ||||||||||| |||| |||||    
T  3073981 aatttcttgtaacatttttgtatctcttt-gtaagaactca-ttgataatggcttggagagatcaatctctcc-ccatagtaggtcaag-ttgggccgaa 3073886  T
Q  140 ctgggt 145  Q
    ||||||    
T  3073885 ctgggt 3073880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 7597669 - 7597776
Alignment:
Q  36 aagctaatttcttgtaa-ccttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    ||||||||||||| ||| ||||||||||| ||||   |||||  |||| |||||||||||| ||||  |||||||||| ||| |||||||||   || ||    
T  7597669 aagctaatttcttataatccttttgtatctctttgtaaagaatgcatt-gatagtggattggagagatcaatctctcccccatagtaggtcattgttaga 7597767  T
Q  135 ccgaactgg 143  Q
    |||||||||    
T  7597768 ccgaactgg 7597776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 8153844 - 8153914
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaa 139  Q
    |||||||||||||||| |||||| ||||| ||||  |||||||| |  |||||||||||||| ||||||||||    
T  8153844 tttgtaagaactcatt-gatagttgattggagagatcaatctcttcctcagagtaggtcaag-ttggaccgaa 8153914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 3863 - 3618
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  3863 gtttgttcatagtgaacatgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagttcaatctctcc 3764  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtg---aatgtat---------ttgttttcttcttccctctccttgtttatcttgtgattg-tgctttg 199  Q
    ||||||||||||||||||||||||||||||||||   ||| | |         ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  3763 tccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttg--tatcttgtgattgttgctttg 3666  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3665 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 6304 - 6551
Alignment:
Q  14 gtttgttcattgtgaacttgtcaagctaatttcttgtaaccttttgtatcccttttgtaa-gaactcatttgatagtggattgaagagtacaatctctcc 112  Q
    |||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  6304 gtttgttcatagtgaacttgtcaagctaatttcttgtaagcccttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaaactctcc 6403  T
Q  113 tccagagtaggtcaagtttggaccgaactgggtga-----------atgtatttgttttcttcttccctctccttg-tttatcttgtgattg-tgctttg 199  Q
    |||||||||||| ||||||||||||||||||||||            |||  |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  6404 tccagagtaggttaagtttggaccgaactgggtgaccaatctctttgtgttattgttttcttcttccctctccttgttttatcttgtgattgttgctttg 6503  T
Q  200 tgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6504 tgtttcacacttgtttcctagattggatctaggtggtgtattgttgtt 6551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 11296 - 11063
Alignment:
Q  16 ttgttcattgtgaacttgtcaag-ctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||||||||| ||  |||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||| ||||| |||||||||||    
T  11296 ttgttctttgtgaacttgtaaaatctaatttcttgtaacccttttgtatctcttttgtaagaactcgtt-gatagtggattggagagttcaatctctcct 11198  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtt 203  Q
    |||||||||||||||||||||||||||||||||||          ||| ||||||||| |||||||||||||  ||||||||||| ||||| ||||||||    
T  11197 ccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctcct--tttatcttgtgcttgtggtttgtgtt 11100  T
Q  204 tcacac-ttgtttcctagattagatctaggtggtgtt 239  Q
    |  ||| ||||||||||||||||||||||||| ||||    
T  11099 tttcactttgtttcctagattagatctaggtgttgtt 11063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 39 - 239
Target Start/End: Complemental strand, 8846 - 8637
Alignment:
Q  39 ctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccg 137  Q
    |||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  8846 ctaatttcttgtaacccttttgtatctcttttgtaagaactcgtt-gatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 8748  T
Q  138 aactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgctttgtgtttcacac-ttgtttcctagattaga 226  Q
    |||||||||||          ||| ||||||||| |||||||||| ||  ||||||||||| ||||| |||||| ||  ||| |||||||||||||||||    
T  8747 aactgggtgaacaatctttggtgtctttgttttcctcttccctcttct--tttatcttgtgcttgtggtttgtgcttttcactttgtttcctagattaga 8650  T
Q  227 tctaggtggtgtt 239  Q
    |||||||| ||||    
T  8649 tctaggtgttgtt 8637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 434567 - 434699
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||| |||||||||||    
T  434567 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactcatt-gatagtggattggagagttcaatctctcct 434664  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  434665 ccagagtaggtcaagtttggaccgaactgggtgaa 434699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 11591 - 11723
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||| | |||||||| |||| ||||||||||||| |||||||||||| ||||| |||||||||||    
T  11591 ttgttctttgtgaacttgtcaaagctaatttcttgtaactcatttgtatctcttt-gtaagaactcatt-gatagtggattggagagttcaatctctcct 11688  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  11689 ccagagtaggtcaagtttggaccgaactgggtgaa 11723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 49 - 141
Alignment:
Q  154 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 247  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtt 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 147
Target Start/End: Original strand, 1 - 30
Alignment:
Q  118 agtaggtcaagtttggaccgaactgggtga 147  Q
    ||||||||||||||||||||||||||||||    
T  1 agtaggtcaagtttggaccgaactgggtga 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 950 - 1081
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||   || |||||||| |||||||||||| ||||| |||||||||||    
T  950 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg--aacaactcatt-gatagtggattggagagttcaatctctcct 1046  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||||||||||||||||||||||||||||||||||    
T  1047 ccagagtaggtcaagtttggaccgaactgggtgaa 1081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 114636 - 114768
Alignment:
Q  16 ttgttcattgtgaacttgtcaa-gctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||||  |||||||||||    
T  114636 ttgttctttgtgaacttgtcaaagctaatttcttgtaacgcttttgtatctcttt-gtaagaactcatt-gatagtggattggagagatcaatctctcct 114733  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    ||||||||||| |||||| ||||||||||| ||||    
T  114734 ccagagtaggttaagtttagaccgaactggatgaa 114768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 18137 - 18006
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    ||||||||||||| |||||  |||||||||||||||||| | |||||||| |||| |||| |||||||| |||||||||||| ||||  |||||||||||    
T  18137 ttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaa-aactcatt-gatagtggattggagagatcaatctctcct 18041  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    |||| |||||||||||||||| |||||||||||||    
T  18040 ccagggtaggtcaagtttggatcgaactgggtgaa 18006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 10546 - 10651
Alignment:
Q  38 gctaatttcttgtaacc-ttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggacc 136  Q
    |||||||| |||||||| ||||||||| |||| |||||||||| || |||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  10546 gctaatttattgtaaccattttgtatctcttt-gtaagaactcgtt-gatagtggattgaagagatcaatctctcctccagagtaggtcaag-ttggacc 10642  T
Q  137 gaactgggt 145  Q
    |||||||||    
T  10643 gaactgggt 10651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 7361 - 7492
Alignment:
Q  16 ttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcct 113  Q
    |||||| |||||| |||||  |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||| | ||  |||||||||||    
T  7361 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcatt-gatagtggattggaaagatcaatctctcct 7458  T
Q  114 ccagagtaggtcaagtttggaccgaactgggtgaa 148  Q
    | ||||||||| ||| |||||||||||||||||||    
T  7459 ctagagtaggttaag-ttggaccgaactgggtgaa 7492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 20551 - 20421
Alignment:
Q  14 gtttgttcattgtgaacttgtc-aagctaatttcttgtaacct-tttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctc 111  Q
    |||||||  ||||||||||||  |||||||||||||||||||  |||||||| |||| |||||||||| ||||||| ||||||| ||||  |||||||||    
T  20551 gtttgttttttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc-tttgatattggattggagagatcaatctctc 20454  T
Q  112 ctccagagtaggtcaagtttggaccgaactgggt 145  Q
    | ||||| ||||||||| ||||||||||||||||    
T  20453 ccccagattaggtcaag-ttggaccgaactgggt 20421  T

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Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 149179 - 149103
Alignment:
Q  67 tttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggt 145  Q
    |||||||||||||||| |||||||||||| ||||  |||||||||| ||||||||||| ||| ||||||||||||||||    
T  149179 tttgtaagaactcatt-gatagtggattggagagatcaatctctcccccagagtaggttaag-ttggaccgaactgggt 149103  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 27556 - 27453
Alignment:
Q  36 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattgaagagtacaatctctcctccagagtaggtcaagtttgga 134  Q
    |||||||||||||||||| | |||||||| ||||   || |||| ||| |||||||||||| ||||  |||||||||| ||| |||||||||   |||||    
T  27556 aagctaatttcttgtaactcatttgtatctctttgtaaataacttatt-gatagtggattggagagatcaatctctcccccatagtaggtcattgttgga 27458  T
Q  135 ccgaa 139  Q
    |||||    
T  27457 ccgaa 27453  T

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