View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5853_low_35 (Length: 242)
Name: NF5853_low_35
Description: NF5853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5853_low_35 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22053383 - 22053624
Alignment:
| Q |
1 |
cagtagaagagagaaaaactctagggagaagacaaaacaccaatttcaccatagctactacatccctaatatacacaagattagggttcagtccaaactc |
100 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
22053383 |
cagtagaagcgagaaaaactctagggagaagacaaaacaccaatttcaccatagctactacatccctaatatacacaagattagggttcagtcaaaactc |
22053482 |
T |
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| Q |
101 |
caaaagctacatctaatgaagctgttcctgcaccttgagataaaatcattgcaatagaaaataagaaatatactagataaattactcctccttccaccaa |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22053483 |
caaaagctacatctaatgaagctgttccagcaccttgagataaaatcattgcaatagaaaataagaaatatactagataaattactcctccttccaccaa |
22053582 |
T |
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| Q |
201 |
aattgctagaaatgctttcttcatttagcatcagcattaata |
242 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||| |
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| T |
22053583 |
aattgctagaaatgctctcttcatttagcatcagcattaata |
22053624 |
T |
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