View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5856_low_7 (Length: 254)
Name: NF5856_low_7
Description: NF5856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5856_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 5 - 250
Target Start/End: Original strand, 44958651 - 44958896
Alignment:
| Q |
5 |
agatgaagtgtttcatgtcttcaataagttcaaagtattagttgaaaaagaagcagacaggtaaatatgcttagaagtgatgaaggatgagaatatacat |
104 |
Q |
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| T |
44958651 |
agatgaagtgtttcatgtcttcaataagttcaaagtattagttgaaaaagaagcagacaggtaaatatgcttagaagtgatgaaggatgagaatatacat |
44958750 |
T |
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| Q |
105 |
ctaaatagttggagaatttctttgatgagatgggaattcaacatgagatcacttcaccattcacatctatacataatgtttgatgaagaggaggaaaaga |
204 |
Q |
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| T |
44958751 |
ctaaatagttagagaatttttttgatgagatgggaattcaacatgagatcacttcaccattcacatctatacataatgtttgatgaagaggaggaaaaga |
44958850 |
T |
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| Q |
205 |
ccattatgaacatggcaagatgcatgtttaaagagaataatctacc |
250 |
Q |
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| T |
44958851 |
ccattatgaacatggaaagatgcatgtttaaagagaataagctacc |
44958896 |
T |
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