View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5858_low_3 (Length: 459)

Name: NF5858_low_3
Description: NF5858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5858_low_3
NF5858_low_3
[»] chr1 (10 HSPs)
chr1 (14-328)||(50383045-50383366)
chr1 (30-131)||(50388414-50388517)
chr1 (358-393)||(16182263-16182298)
chr1 (357-416)||(50382967-50383025)
chr1 (346-392)||(18512546-18512592)
chr1 (346-416)||(28564292-28564362)
chr1 (343-392)||(18911901-18911950)
chr1 (358-391)||(33229649-33229682)
chr1 (343-416)||(50103911-50103984)
chr1 (348-416)||(7180561-7180629)
[»] chr3 (11 HSPs)
chr3 (332-416)||(25833861-25833945)
chr3 (349-390)||(42359871-42359912)
chr3 (361-416)||(9114079-9114134)
chr3 (330-392)||(25883959-25884022)
chr3 (346-417)||(40739157-40739228)
chr3 (346-392)||(27329903-27329949)
chr3 (346-392)||(29559645-29559691)
chr3 (346-392)||(51879148-51879194)
chr3 (366-415)||(22535060-22535109)
chr3 (344-392)||(14795162-14795210)
chr3 (348-392)||(42334098-42334142)
[»] chr8 (11 HSPs)
chr8 (346-417)||(21548443-21548514)
chr8 (346-392)||(34873139-34873185)
chr8 (346-392)||(36035150-36035196)
chr8 (346-416)||(8034359-8034429)
chr8 (346-392)||(13105144-13105190)
chr8 (346-416)||(17072510-17072580)
chr8 (346-416)||(17575691-17575761)
chr8 (346-392)||(31024347-31024393)
chr8 (332-417)||(38620287-38620373)
chr8 (350-392)||(40740581-40740623)
chr8 (347-392)||(44053411-44053456)
[»] chr2 (14 HSPs)
chr2 (358-393)||(9985089-9985124)
chr2 (345-392)||(15939341-15939388)
chr2 (340-395)||(34459268-34459323)
chr2 (332-417)||(4183214-4183300)
chr2 (346-392)||(36748939-36748985)
chr2 (344-393)||(23984193-23984242)
chr2 (346-416)||(1844870-1844940)
chr2 (346-392)||(7717576-7717622)
chr2 (346-392)||(14518337-14518383)
chr2 (332-417)||(6331600-6331685)
chr2 (343-392)||(11268339-11268388)
chr2 (348-392)||(13424056-13424100)
chr2 (348-388)||(25515995-25516035)
chr2 (348-392)||(44898453-44898497)
[»] chr7 (4 HSPs)
chr7 (346-408)||(42798272-42798334)
chr7 (361-416)||(18503427-18503482)
chr7 (347-416)||(10901699-10901768)
chr7 (343-383)||(22548261-22548301)
[»] chr4 (13 HSPs)
chr4 (332-417)||(26868387-26868472)
chr4 (334-384)||(3784952-3785002)
chr4 (346-392)||(36099154-36099200)
chr4 (346-416)||(37251166-37251236)
chr4 (346-416)||(42381060-42381130)
chr4 (361-399)||(43539880-43539918)
chr4 (347-416)||(44224434-44224503)
chr4 (347-392)||(47929299-47929344)
chr4 (347-416)||(55260260-55260329)
chr4 (347-383)||(21863865-21863901)
chr4 (347-383)||(21919726-21919762)
chr4 (361-417)||(33933685-33933741)
chr4 (332-383)||(43905748-43905800)
[»] chr6 (3 HSPs)
chr6 (346-417)||(33646888-33646959)
chr6 (346-392)||(18904318-18904364)
chr6 (344-392)||(7545380-7545428)
[»] chr5 (5 HSPs)
chr5 (334-385)||(25460759-25460810)
chr5 (346-392)||(3741007-3741053)
chr5 (346-392)||(8241103-8241149)
chr5 (340-417)||(20071426-20071503)
chr5 (334-382)||(33018507-33018555)
[»] scaffold0003 (1 HSPs)
scaffold0003 (340-417)||(304031-304108)


Alignment Details
Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 14 - 328
Target Start/End: Complemental strand, 50383366 - 50383045
Alignment:
Q  14 gttggaactttgtttaatttgattctaatttttagactaagatatctggggtcaatgacatcatttacccggcatcgatctggctctaatggaaatcatt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50383366 gttggaactttgtttaatttgattctaatttttagactaagatatctggggtcaatgacatcatttacccggcatcgatctggttctaatggaaatcatt 50383267  T
Q  114 tttccaaaaaacaaagttcaattgaaaagtcttgaagaatcaccaatgggaccatggcaagacttttgaaattaaattatcaagtccaagtaagcatccg 213  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50383266 tttccaaaaaacgaagttcaattgaaaagtcttgaagaatcaccaatgggaccatggcaagacttttgaaattaaattatcaagtccaagtaagcatccg 50383167  T
Q  214 tagtattgcatccttatattgaatggtcaactagtagtgttacttgaaaaataatcaaattatcatcataaatttt-------tctatacgtatgtagtc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  50383166 tagtattgcatccttatattgaatggtcaactagtagtgttacttgaaaaataatcaaattatcatcataaatttttctgatatctatacgtatgtagtc 50383067  T
Q  307 acatgcgcatacaattaaaaat 328  Q
    ||||||||||||||||||||||    
T  50383066 acatgcgcatacaattaaaaat 50383045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 50388517 - 50388414
Alignment:
Q  30 atttgattctaatttttagactaagatatctggggtcaatgacatcatttacccggcatcg--atctggctctaatggaaatcatttttccaaaaaacaa 127  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||  |||  |||||| ||||||| ||||||| |||||||||    
T  50388517 atttgattctaatttttagactaagatatatggggacaatggcatcatttccccggcatcgaaatccagctctattggaaattatttttcgaaaaaacaa 50388418  T
Q  128 agtt 131  Q
    ||||    
T  50388417 agtt 50388414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 393
Target Start/End: Original strand, 16182263 - 16182298
Alignment:
Q  358 cgaacaccccacttctccacgtttaaaatgtgtgaa 393  Q
    |||||||||||||||||||| |||||||||||||||    
T  16182263 cgaacaccccacttctccacatttaaaatgtgtgaa 16182298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 50383025 - 50382967
Alignment:
Q  357 tcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||||||||| |||| |||||||||||||||  || ||||||||||||| |||||    
T  50383025 tcgaacaccccactt-tccaggtttaaaatgtgtgagcttcagttactaggctatttgac 50382967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 18512592 - 18512546
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  18512592 gggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 18512546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 416
Target Start/End: Complemental strand, 28564362 - 28564292
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    |||||||||| ||| |||||||||||||||||  ||||| |||||||  | |||  |||||||||||||||    
T  28564362 gggttcgaacctcggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgac 28564292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 18911901 - 18911950
Alignment:
Q  343 tcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||||||  || |||||||||| |||||| ||||||||||||||    
T  18911901 tcagggttcgaaccccggacaccccactcctccacatttaaaatgtgtga 18911950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 391
Target Start/End: Complemental strand, 33229682 - 33229649
Alignment:
Q  358 cgaacaccccacttctccacgtttaaaatgtgtg 391  Q
    |||||||||||||||||||| |||||||||||||    
T  33229682 cgaacaccccacttctccacatttaaaatgtgtg 33229649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 416
Target Start/End: Original strand, 50103911 - 50103984
Alignment:
Q  343 tcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    |||||||||||||   | ||||| ||||||||||| |||||||||||| || | |||  |||||||||||||||    
T  50103911 tcagggttcgaaccctggacacctcacttctccacatttaaaatgtgtcaactctagccactaggctacttgac 50103984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 7180629 - 7180561
Alignment:
Q  348 gttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||  || |||||||||||||||||  ||||| |||||||  | |||| |||||||||||||||    
T  7180629 gttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagtcactaggctacttgac 7180561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 25833861 - 25833945
Alignment:
Q  332 tatatgcaggatcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||||| | |||||||||| |||||||| |||||| |||||  ||||| |||||||  | |||| |||||||||||||||    
T  25833861 tatatgcaggagcggggttcgaacctcgaacactccacttatccacaattaaattgtgtgagctctagtcactaggctacttgac 25833945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 42359912 - 42359871
Alignment:
Q  349 ttcgaacatcgaacaccccacttctccacgtttaaaatgtgt 390  Q
    ||||||||||| ||||||||||||||||| ||||||||||||    
T  42359912 ttcgaacatcggacaccccacttctccacatttaaaatgtgt 42359871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 416
Target Start/End: Original strand, 9114079 - 9114134
Alignment:
Q  361 acaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||||||||||| ||||||||||||||  |  ||| |||||||||||||||    
T  9114079 acaccccacttctccacatttaaaatgtgtgagctccagtcactaggctacttgac 9114134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 25884022 - 25883959
Alignment:
Q  330 aatatatgcagga-tcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||||  || ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  25884022 aatatatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 25883959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 417
Target Start/End: Complemental strand, 40739228 - 40739157
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    |||||||||| ||| ||||| |||||||||| |||||||||||||||  | |||  ||||| ||||||||||    
T  40739228 gggttcgaacttcggacacctcacttctccatgtttaaaatgtgtgagctctagccactagactacttgacc 40739157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 27329949 - 27329903
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  27329949 gggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 27329903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 29559691 - 29559645
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||||||||    
T  29559691 gggtttgaacttcggacaccccacttctccacatttaaaatgtgtga 29559645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 51879148 - 51879194
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  51879148 gggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 51879194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 22535109 - 22535060
Alignment:
Q  366 ccacttctccacgtttaaaatgtgtgaattttagttactaggctacttga 415  Q
    ||||||||||||||||||||| || ||| ||||| |||||| ||||||||    
T  22535109 ccacttctccacgtttaaaatatgcgaactttagctactagactacttga 22535060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 14795162 - 14795210
Alignment:
Q  344 cagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||| |||  || ||||||||||||||||| ||||||||||||||    
T  14795162 cagggttcaaaccccggacaccccacttctccacatttaaaatgtgtga 14795210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 42334142 - 42334098
Alignment:
Q  348 gttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||| |||||||  |||||||||||| ||||||||||||||    
T  42334142 gttcgaacctcgaacattccacttctccacatttaaaatgtgtga 42334098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 417
Target Start/End: Complemental strand, 21548514 - 21548443
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    ||||||||||  ||||||||||||||||||||  |||||||||||||  | |||  ||||||||||||||||    
T  21548514 gggttcgaaccccgaacaccccacttctccacaattaaaatgtgtgagctctagccactaggctacttgacc 21548443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 34873139 - 34873185
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  34873139 gggttcgaacctcggacaccccacttctccacatttaaaatgtgtga 34873185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 36035196 - 36035150
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  36035196 gggttcgaacctcggacaccccacttctccacatttaaaatgtgtga 36035150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 416
Target Start/End: Complemental strand, 8034429 - 8034359
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||||| |  |||||||||||||||||  ||||| ||||||| || |||  |||||||||||||||    
T  8034429 gggttcgaacaccagacaccccacttctccacaattaaattgtgtgagttctagccactaggctacttgac 8034359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 13105144 - 13105190
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||| ||  ||||||||||||||||| ||||||||||||||    
T  13105144 gggttcgaacctcagacaccccacttctccacatttaaaatgtgtga 13105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 416
Target Start/End: Complemental strand, 17072580 - 17072510
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||||  ||||||||||||||||||||  ||||| |||||||  | |||  |||||||||||||||    
T  17072580 gggttcgaaccccgaacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgac 17072510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 416
Target Start/End: Original strand, 17575691 - 17575761
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||||  ||||||||||||||||||||  ||||| |||||||  | |||  |||||||||||||||    
T  17575691 gggttcgaaccccgaacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgac 17575761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 31024347 - 31024393
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  31024347 gggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 31024393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 417
Target Start/End: Complemental strand, 38620373 - 38620287
Alignment:
Q  332 tatatgcaggatcaggg-ttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    ||||||||||| | ||| |||||||  ||||||| ||||||||||||  ||||| |||||||| | |||  ||||||||||||||||    
T  38620373 tatatgcaggagccgggattcgaaccccgaacactccacttctccacaattaaattgtgtgaactctagccactaggctacttgacc 38620287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 40740581 - 40740623
Alignment:
Q  350 tcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||    
T  40740581 tcgaacctcggacaccccacttctccacatttaaaatgtgtga 40740623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Complemental strand, 44053456 - 44053411
Alignment:
Q  347 ggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||  || ||||||||||||||||| ||||||||||||||    
T  44053456 ggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 44053411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 393
Target Start/End: Complemental strand, 9985124 - 9985089
Alignment:
Q  358 cgaacaccccacttctccacgtttaaaatgtgtgaa 393  Q
    ||||||||||||||||||||||||||||||||||||    
T  9985124 cgaacaccccacttctccacgtttaaaatgtgtgaa 9985089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 392
Target Start/End: Original strand, 15939341 - 15939388
Alignment:
Q  345 agggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||    
T  15939341 agggttcgaaccccgaacaccccacttctccacatttaaaatgtgtga 15939388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 34459268 - 34459323
Alignment:
Q  340 ggatcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaatt 395  Q
    |||||||| ||||||||||| ||||| ||||||| ||| |||||||||||||||||    
T  34459268 ggatcaggattcgaacatcggacaccacacttcttcacatttaaaatgtgtgaatt 34459323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 417
Target Start/End: Original strand, 4183214 - 4183300
Alignment:
Q  332 tatatgcagga-tcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    ||||||||||| || ||||||||||  ||||||| ||||||||||||  ||||| |||||||| | |||  ||||||||||||||||    
T  4183214 tatatgcaggagtcggggttcgaaccccgaacactccacttctccacaattaaattgtgtgaactctagccactaggctacttgacc 4183300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 36748939 - 36748985
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||    
T  36748939 gggttcgaacttcgaacactccacttctccacatttaaaatgtgtga 36748985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 393
Target Start/End: Complemental strand, 23984242 - 23984193
Alignment:
Q  344 cagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaa 393  Q
    ||||||||||||  || ||||||||||||||||| |||||||||||||||    
T  23984242 cagggttcgaaccccggacaccccacttctccacatttaaaatgtgtgaa 23984193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 416
Target Start/End: Original strand, 1844870 - 1844940
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    |||||||||| ||| |||||||||||||||||  ||||| |||||||  | |||  |||||||||||||||    
T  1844870 gggttcgaacctcggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgac 1844940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 7717622 - 7717576
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||| ||| |||| |||||||||||| ||||||||||||||    
T  7717622 gggttcgaacttcggacactccacttctccacatttaaaatgtgtga 7717576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 14518337 - 14518383
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    |||||||||| |||||||| |||||||||||  ||||||||||||||    
T  14518337 gggttcgaacctcgaacactccacttctccatatttaaaatgtgtga 14518383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 417
Target Start/End: Original strand, 6331600 - 6331685
Alignment:
Q  332 tatatgcaggatcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    ||||||||||| | ||||||||||  || |||| ||||||||||||  ||||| |||||||  | |||  ||||||||||||||||    
T  6331600 tatatgcaggagccgggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacc 6331685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 11268339 - 11268388
Alignment:
Q  343 tcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||||| |||||||||  |||||||||  ||||||||||||||    
T  11268339 tcagggttcgaacctcgaacaccgtacttctccatatttaaaatgtgtga 11268388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 13424100 - 13424056
Alignment:
Q  348 gttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||| |||| | ||||||||||| ||||||||||||||    
T  13424100 gttcgaacatcaaacatctcacttctccacatttaaaatgtgtga 13424056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 25516035 - 25515995
Alignment:
Q  348 gttcgaacatcgaacaccccacttctccacgtttaaaatgt 388  Q
    |||||||| ||| ||||||||||||||||| ||||||||||    
T  25516035 gttcgaacttcggacaccccacttctccacatttaaaatgt 25515995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 44898497 - 44898453
Alignment:
Q  348 gttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||  || ||||||||||||||||| ||||||||||||||    
T  44898497 gttcgaactccggacaccccacttctccacatttaaaatgtgtga 44898453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 42798334 - 42798272
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggc 408  Q
    ||||||||||  ||||||||| |||||||||| ||||||||||||||  ||||| ||||||||    
T  42798334 gggttcgaactccgaacacccgacttctccacatttaaaatgtgtgagctttagctactaggc 42798272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 416
Target Start/End: Complemental strand, 18503482 - 18503427
Alignment:
Q  361 acaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||||||||||| ||||||||||||||  ||||   |||||||||||||||    
T  18503482 acaccccacttctccacatttaaaatgtgtgagctttaaccactaggctacttgac 18503427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 10901699 - 10901768
Alignment:
Q  347 ggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    |||||||||  | |||||||||||||||||| |||| |||||||||  |  ||| |||||||||||||||    
T  10901699 ggttcgaacccctaacaccccacttctccacatttataatgtgtgagctccagtcactaggctacttgac 10901768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 383
Target Start/End: Original strand, 22548261 - 22548301
Alignment:
Q  343 tcagggttcgaacatcgaacaccccacttctccacgtttaa 383  Q
    |||||||||||||  |||||||||||||||||||| |||||    
T  22548261 tcagggttcgaaccccgaacaccccacttctccacatttaa 22548301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 417
Target Start/End: Original strand, 26868387 - 26868472
Alignment:
Q  332 tatatgcaggatcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    ||||||||||| | ||||||||||  || |||| ||||||||||||  ||||| |||||||  |||||  ||||||||||||||||    
T  26868387 tatatgcaggagccgggttcgaaccccggacactccacttctccacaattaaattgtgtgagctttagccactaggctacttgacc 26868472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 3784952 - 3785002
Alignment:
Q  334 tatgcaggatcagggttcgaacatcgaacaccccacttctccacgtttaaa 384  Q
    |||||||| |||||||||||||  |||||||| ||||||||||| ||||||    
T  3784952 tatgcagggtcagggttcgaaccccgaacaccacacttctccacatttaaa 3785002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 36099200 - 36099154
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  36099200 gggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 36099154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 416
Target Start/End: Original strand, 37251166 - 37251236
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    |||||||||||||| |||| ||||||||||||  ||||| |||||||| | |||  ||||| |||||||||    
T  37251166 gggttcgaacatcggacactccacttctccacaattaaattgtgtgaactctagccactagactacttgac 37251236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 416
Target Start/End: Complemental strand, 42381130 - 42381060
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    |||||||||| ||  |||||||||||||||||  ||||| |||||||  |||||  |||||||||||||||    
T  42381130 gggttcgaacctcagacaccccacttctccacaattaaattgtgtgagctttagccactaggctacttgac 42381060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Original strand, 43539880 - 43539918
Alignment:
Q  361 acaccccacttctccacgtttaaaatgtgtgaattttag 399  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  43539880 acaccccacttctccacatttaaaatgtgtgaactttag 43539918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Complemental strand, 44224503 - 44224434
Alignment:
Q  347 ggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||| ||  |||||||||||||||||  ||||| |||| || ||||||  |||||||||||||||    
T  44224503 ggttcgaacctcagacaccccacttctccacaattaaattgtgggagttttagccactaggctacttgac 44224434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 47929299 - 47929344
Alignment:
Q  347 ggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||| ||| | ||||||||||||||| ||||||||||||||    
T  47929299 ggttcgaacctcggaaaccccacttctccacatttaaaatgtgtga 47929344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Complemental strand, 55260329 - 55260260
Alignment:
Q  347 ggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgac 416  Q
    ||||||||| ||  |||| |||||||||||| |||||||| ||||| || |||| |||| ||||||||||    
T  55260329 ggttcgaacctctgacactccacttctccacatttaaaatatgtgagttatagtcactaagctacttgac 55260260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 21863901 - 21863865
Alignment:
Q  347 ggttcgaacatcgaacaccccacttctccacgtttaa 383  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  21863901 ggttcgaacatcggacaccccacttctccacttttaa 21863865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 21919762 - 21919726
Alignment:
Q  347 ggttcgaacatcgaacaccccacttctccacgtttaa 383  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  21919762 ggttcgaacatcggacaccccacttctccacttttaa 21919726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 417
Target Start/End: Complemental strand, 33933741 - 33933685
Alignment:
Q  361 acaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    ||||||||||||||||| ||||| ||||||||  | |||  ||||||||||||||||    
T  33933741 acaccccacttctccacatttaatatgtgtgagctatagccactaggctacttgacc 33933685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 383
Target Start/End: Original strand, 43905748 - 43905800
Alignment:
Q  332 tatatgcagg-atcagggttcgaacatcgaacaccccacttctccacgtttaa 383  Q
    |||||||||| ||| ||||||||||  || |||||||||||||||||||||||    
T  43905748 tatatgcagggatcggggttcgaaccccggacaccccacttctccacgtttaa 43905800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 417
Target Start/End: Original strand, 33646888 - 33646959
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    |||||||||| ||| |||||||||||||||||  ||||| |||||||  | |||  ||||||||||||||||    
T  33646888 gggttcgaacctcggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacc 33646959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 18904318 - 18904364
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  18904318 gggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 18904364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 7545380 - 7545428
Alignment:
Q  344 cagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||||  ||||||||||||||||||||  ||||| |||||||    
T  7545380 cagggttcgaaccccgaacaccccacttctccacaattaaattgtgtga 7545428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 25460810 - 25460759
Alignment:
Q  334 tatgcaggatcagggttcgaacatcgaacaccccacttctccacgtttaaaa 385  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| |||||||    
T  25460810 tatgcaggggcagggttcgaaccccgaacaccccacttctccacatttaaaa 25460759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 3741007 - 3741053
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  3741007 gggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 3741053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 392
Target Start/End: Original strand, 8241103 - 8241149
Alignment:
Q  346 gggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtga 392  Q
    ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  8241103 gggttcgaaccccggacaccccacttctccacatttaaaatgtgtga 8241149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 417
Target Start/End: Complemental strand, 20071503 - 20071426
Alignment:
Q  340 ggatcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    ||||| |||||||||| ||| ||||||||||| ||||   ||||| |||||||||| |||  ||||| ||||||||||    
T  20071503 ggatcggggttcgaacctcggacaccccacttttccataattaaattgtgtgaattctagccactagactacttgacc 20071426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 33018555 - 33018507
Alignment:
Q  334 tatgcaggatcagggttcgaacatcgaacaccccacttctccacgttta 382  Q
    |||||||| || |||||||||| ||| ||||||||||||||||| ||||    
T  33018555 tatgcagggtcggggttcgaacttcggacaccccacttctccacattta 33018507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 417
Target Start/End: Complemental strand, 304108 - 304031
Alignment:
Q  340 ggatcagggttcgaacatcgaacaccccacttctccacgtttaaaatgtgtgaattttagttactaggctacttgacc 417  Q
    ||||| |||||||||| ||| ||||||||||| ||||   ||||| |||||||||| |||  ||||| ||||||||||    
T  304108 ggatcggggttcgaacctcggacaccccacttttccataattaaattgtgtgaattctagccactagactacttgacc 304031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University