View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5859-Insertion-10 (Length: 225)
Name: NF5859-Insertion-10
Description: NF5859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5859-Insertion-10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 8954981 - 8955197
Alignment:
| Q |
9 |
ccgcccgtgctcaacgtatgactcaagcgtccataacatcaattaataacaaattttattcaattactttcatatgaatacatgcatatnnnnnnntaga |
108 |
Q |
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| T |
8954981 |
ccgcccgtgctcaacgtacgactcaaacgtccataacatcaattaataacaaattttattcaattactttcataggaatacatgcatataaaaaaataga |
8955080 |
T |
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| Q |
109 |
atctctcaatcagggatttttgaatgaaatcattacaagggtagaatactcctacaatgatgagatcataaagggaatacggaatcctcatttttacgag |
208 |
Q |
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| T |
8955081 |
atctctcaatcaaggatttttgaatgaaatcattacaagggtagaatactcctacaatgataagatcatgaagggaatatggaatcctcatttttatgag |
8955180 |
T |
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| Q |
209 |
taatcttttatttatac |
225 |
Q |
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| T |
8955181 |
taatcttttatttatac |
8955197 |
T |
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