View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5860_low_2 (Length: 245)
Name: NF5860_low_2
Description: NF5860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5860_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 19530633 - 19530835
Alignment:
| Q |
21 |
aactcactccgaatcgaaccatcttcactcccaccattcacaaacaccttaccaaaaatctccgccacacgcaaaatcacttcctcctccgaaaccttcc |
120 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
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| T |
19530633 |
aactcactccgaatcaaaccatcttcactcccaccattcacaaacaccttaccaaaaatctccgccacacgcaaaactgcttcctcctccaaaaccttcc |
19530732 |
T |
|
| Q |
121 |
caacaatccatccatgcctatacttcccaaccacagccttcacctcttcctccccattcaccaccacaacactatacactttctcttctccagacacatt |
220 |
Q |
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|||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |
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| T |
19530733 |
caacaatccacccatgcctatacttcccaatcacagctttcacctcatcctccccattcaccaccacaacactatacaccttctcttctccatacacatt |
19530832 |
T |
|
| Q |
221 |
cac |
223 |
Q |
| |
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||| |
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|
| T |
19530833 |
cac |
19530835 |
T |
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