View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5861-Insertion-2 (Length: 915)

Name: NF5861-Insertion-2
Description: NF5861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5861-Insertion-2
NF5861-Insertion-2
[»] chr1 (10 HSPs)
chr1 (541-915)||(29660277-29660654)
chr1 (307-424)||(1951112-1951229)
chr1 (307-424)||(2793415-2793532)
chr1 (541-692)||(29749380-29749537)
chr1 (307-421)||(49499335-49499449)
chr1 (307-424)||(29644075-29644192)
chr1 (307-424)||(42021838-42021956)
chr1 (318-424)||(34733042-34733147)
chr1 (484-540)||(49499512-49499568)
chr1 (484-533)||(31204021-31204070)
[»] chr5 (18 HSPs)
chr5 (9-424)||(32837199-32837607)
chr5 (307-424)||(42061602-42061719)
chr5 (307-424)||(37214882-37214999)
chr5 (318-424)||(21336499-21336605)
chr5 (307-424)||(43490909-43491026)
chr5 (307-422)||(28441948-28442063)
chr5 (318-424)||(21827798-21827904)
chr5 (318-424)||(22937833-22937939)
chr5 (307-407)||(28788167-28788267)
chr5 (320-424)||(31862988-31863092)
chr5 (310-424)||(39191447-39191561)
chr5 (323-399)||(14376638-14376713)
chr5 (318-375)||(21333483-21333540)
chr5 (320-374)||(40916667-40916721)
chr5 (484-543)||(28442125-28442184)
chr5 (484-540)||(14376778-14376834)
chr5 (484-540)||(31862872-31862928)
chr5 (484-540)||(42061486-42061542)
[»] chr6 (10 HSPs)
chr6 (179-424)||(2371529-2371764)
chr6 (307-421)||(9953155-9953269)
chr6 (307-422)||(34501532-34501647)
chr6 (307-422)||(23379580-23379695)
chr6 (307-422)||(23388919-23389034)
chr6 (318-424)||(5738967-5739073)
chr6 (9-57)||(2371886-2371934)
chr6 (484-540)||(31071494-31071550)
chr6 (484-534)||(23379758-23379808)
chr6 (484-534)||(23389097-23389147)
[»] chr4 (33 HSPs)
chr4 (307-424)||(5721738-5721855)
chr4 (307-424)||(15431280-15431397)
chr4 (307-424)||(15437894-15438011)
chr4 (307-424)||(18910720-18910837)
chr4 (318-422)||(19861065-19861169)
chr4 (311-421)||(3798567-3798677)
chr4 (307-424)||(9717067-9717184)
chr4 (307-421)||(5680588-5680702)
chr4 (318-424)||(33410740-33410846)
chr4 (307-399)||(37104028-37104120)
chr4 (318-424)||(19865421-19865527)
chr4 (319-424)||(53093837-53093941)
chr4 (318-424)||(40617590-40617696)
chr4 (320-424)||(5669744-5669848)
chr4 (318-424)||(49269851-49269956)
chr4 (318-424)||(12237470-12237576)
chr4 (318-374)||(27013396-27013452)
chr4 (484-541)||(56198028-56198085)
chr4 (484-542)||(5669626-5669684)
chr4 (484-541)||(3798740-3798797)
chr4 (484-541)||(33410906-33410963)
chr4 (484-540)||(18910604-18910660)
chr4 (484-540)||(56194722-56194778)
chr4 (484-533)||(15405842-15405891)
chr4 (484-540)||(9716951-9717007)
chr4 (484-540)||(19865587-19865643)
chr4 (484-540)||(33926121-33926177)
chr4 (484-540)||(47114776-47114832)
chr4 (484-539)||(19861231-19861286)
chr4 (484-517)||(12237377-12237410)
chr4 (484-540)||(15431164-15431220)
chr4 (484-540)||(15437778-15437834)
chr4 (321-372)||(48014721-48014772)
[»] chr3 (25 HSPs)
chr3 (307-424)||(18645508-18645625)
chr3 (307-424)||(35411793-35411910)
chr3 (307-424)||(538131-538248)
chr3 (307-424)||(6922006-6922123)
chr3 (307-424)||(16185423-16185540)
chr3 (307-424)||(23299320-23299437)
chr3 (307-424)||(10884134-10884251)
chr3 (318-421)||(52198424-52198527)
chr3 (307-407)||(53815105-53815205)
chr3 (318-424)||(6445439-6445546)
chr3 (307-395)||(17532484-17532572)
chr3 (320-419)||(54736631-54736730)
chr3 (307-424)||(54460492-54460609)
chr3 (318-399)||(55032715-55032796)
chr3 (318-424)||(28265116-28265223)
chr3 (307-404)||(10107394-10107491)
chr3 (307-374)||(8462325-8462392)
chr3 (320-371)||(9392057-9392108)
chr3 (484-540)||(10107558-10107614)
chr3 (484-540)||(52198305-52198361)
chr3 (373-424)||(9380147-9380198)
chr3 (484-543)||(23299497-23299556)
chr3 (484-534)||(17532613-17532663)
chr3 (484-541)||(10884017-10884074)
chr3 (484-540)||(538015-538071)
[»] chr7 (16 HSPs)
chr7 (307-424)||(8276128-8276245)
chr7 (307-422)||(10431504-10431619)
chr7 (307-424)||(26556626-26556743)
chr7 (307-424)||(2442045-2442161)
chr7 (307-407)||(45287904-45288004)
chr7 (307-407)||(45291240-45291340)
chr7 (307-422)||(4542192-4542306)
chr7 (484-541)||(4542073-4542130)
chr7 (484-540)||(10431386-10431442)
chr7 (484-540)||(16164889-16164945)
chr7 (484-540)||(26556510-26556566)
chr7 (484-540)||(48645865-48645921)
chr7 (595-660)||(39911054-39911119)
chr7 (484-540)||(2442221-2442277)
chr7 (484-540)||(48644616-48644672)
chr7 (484-540)||(6602621-6602677)
[»] chr2 (23 HSPs)
chr2 (307-424)||(26358788-26358905)
chr2 (307-424)||(38006053-38006170)
chr2 (309-424)||(25873319-25873434)
chr2 (307-422)||(36809202-36809317)
chr2 (307-424)||(25821684-25821801)
chr2 (307-424)||(25869951-25870068)
chr2 (307-407)||(10600096-10600196)
chr2 (320-424)||(30275472-30275575)
chr2 (318-424)||(25139818-25139924)
chr2 (305-399)||(29439716-29439810)
chr2 (319-424)||(16788504-16788609)
chr2 (484-534)||(36985679-36985729)
chr2 (484-541)||(26358671-26358728)
chr2 (484-540)||(36809379-36809435)
chr2 (484-540)||(15466170-15466226)
chr2 (484-534)||(38006230-38006280)
chr2 (484-541)||(25873202-25873259)
chr2 (484-533)||(30275635-30275684)
chr2 (484-541)||(45456299-45456356)
chr2 (484-540)||(25869835-25869891)
chr2 (484-540)||(45453051-45453107)
chr2 (491-534)||(13136768-13136810)
chr2 (322-372)||(30925919-30925969)
[»] scaffold0005 (2 HSPs)
scaffold0005 (307-422)||(291081-291196)
scaffold0005 (484-519)||(290984-291019)
[»] scaffold0080 (1 HSPs)
scaffold0080 (307-424)||(26361-26478)
[»] chr8 (22 HSPs)
chr8 (311-424)||(25595455-25595568)
chr8 (307-424)||(45156685-45156802)
chr8 (312-424)||(43682569-43682681)
chr8 (318-421)||(5540773-5540876)
chr8 (306-424)||(25228128-25228246)
chr8 (311-424)||(18722081-18722193)
chr8 (311-424)||(25592270-25592383)
chr8 (311-424)||(33878009-33878122)
chr8 (319-413)||(20520079-20520173)
chr8 (318-424)||(17895295-17895402)
chr8 (318-424)||(10663127-10663233)
chr8 (336-424)||(14420980-14421068)
chr8 (310-424)||(30640625-30640739)
chr8 (318-374)||(23612745-23612801)
chr8 (484-541)||(33878182-33878239)
chr8 (484-534)||(25595629-25595679)
chr8 (484-540)||(18722254-18722310)
chr8 (484-534)||(25592444-25592494)
chr8 (484-529)||(14589760-14589805)
chr8 (484-540)||(43682741-43682798)
chr8 (484-540)||(23612569-23612625)
chr8 (484-541)||(10663010-10663067)
[»] scaffold0015 (1 HSPs)
scaffold0015 (307-414)||(197357-197464)
[»] scaffold0035 (2 HSPs)
scaffold0035 (318-424)||(61713-61819)
scaffold0035 (484-540)||(61597-61653)
[»] scaffold0270 (3 HSPs)
scaffold0270 (307-424)||(4186-4304)
scaffold0270 (307-424)||(11316-11434)
scaffold0270 (307-424)||(826-944)
[»] scaffold0381 (1 HSPs)
scaffold0381 (318-374)||(6331-6387)
[»] scaffold0045 (1 HSPs)
scaffold0045 (484-540)||(88965-89021)
[»] scaffold1684 (1 HSPs)
scaffold1684 (484-533)||(418-467)
[»] scaffold0334 (1 HSPs)
scaffold0334 (484-540)||(18463-18519)


Alignment Details
Target: chr1 (Bit Score: 322; Significance: 0; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 541 - 915
Target Start/End: Original strand, 29660277 - 29660654
Alignment:
Q  541 cttgttgccattcaatggttaatgatgttagtgctgttgttttaaaactttttgtgagcggctaaatttatctcttatttcccctagagcaggagttgac 640  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29660277 cttgttgccattcaatggttaatgattttagtgctgttgttttaaaactttttgtgagcggctaaatttatctcttatttcccctagagcaggagttgac 29660376  T
Q  641 cctcccttatctcgtgatcccccgttccctgctttcagcctctaatcatctgcacgtgtatcgttaaaggtatcttatttttgacaaaatattttcattc 740  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  29660377 cctcccttatctcgtgatcccccgttccctgctttcagcctctaatcatctgcatgtgtatctttaaaggtatcttatttttaacaaaatattttcattc 29660476  T
Q  741 aaaatgtttagcttaatagcttttattttcattgattatgatgatgtatgcagttccataatcagattcagttcatattcattggttgtctgtcatgttt 840  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29660477 aaaatgtctagcttaatagcttttattttcattgattatgatgatgtatgcagttccataatcagattcagttcaaattcattggttgtctgtcatgttt 29660576  T
Q  841 aacaatagtgccctgttaat-agggattcagcctggg-attaggattagtcatgtcctct-attttcattgaatgtag 915  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||| || ||||||||||||||    
T  29660577 aacaatagtgcccagttaataagggattcagcctgggaattaggattagtcatgtcctctaatcttcattgaatgtag 29660654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 1951112 - 1951229
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  1951112 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccactgtcgaatgaacctcatcctatgctccaaatcgtgacacgttt 1951211  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  1951212 tcaacaatcgtgacacga 1951229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 2793532 - 2793415
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  2793532 tgccacatgtccctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttt 2793433  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  2793432 tcaacaatcgtgacacga 2793415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 541 - 692
Target Start/End: Complemental strand, 29749537 - 29749380
Alignment:
Q  541 cttgttgccattcaatggttaatgatgttagtgctgttgttttaaaacttttt-gtgagcggctaaatttatctcttatttcccctagagcaggagttga 639  Q
    |||||||||||||||||||| ||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  29749537 cttgttgccattcaatggttgatgatattagtgttattgttttaaaacttttttgtgagcggctaaatttatctcttatttcccctagtgcaggagttga 29749438  T
Q  640 ccctcccttatctcgtgatcccccgttccctgc-----tttcagcctctaatcatctg 692  Q
    |||||||| ||||||||||||||| ||||||||     ||||||||||||||||||||    
T  29749437 ccctccctcatctcgtgatcccccattccctgctgctgtttcagcctctaatcatctg 29749380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 49499335 - 49499449
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  49499335 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatatgctccaaatcgtgacacgttt 49499434  T
Q  407 tcaacaatcgtgaca 421  Q
    |||||||||||||||    
T  49499435 tcaacaatcgtgaca 49499449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 29644075 - 29644192
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  29644075 tgccacatgtccctaaaatcatgtcacgaaatagccatcgtaacacgttttagccaatgtcgaatgaatctcatcctgtgctccaaatcgtgatacgttt 29644174  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  29644175 tcaacaatcgtgacacga 29644192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 42021956 - 42021838
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaac-gtt 405  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||    
T  42021956 tgccacatgtccctaaaatcgtgtcacgaaatagccatcgtaacacgttttaaccaatgtcgaatgaacctcatccgatgctccaaatcgtgacacattt 42021857  T
Q  406 ttcaacaatcgtgacacga 424  Q
    ||||  |||||||||||||    
T  42021856 ttcagtaatcgtgacacga 42021838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 34733042 - 34733147
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    ||||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||||    
T  34733042 cctaaaatcatgtcacgaaatagccatcgtgacacatttta-ccaatgtcgaatgaacctcatcctgtgctccaaatcctgacatgttttcaacaatcgt 34733140  T
Q  418 gacacga 424  Q
    | |||||    
T  34733141 gtcacga 34733147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 49499512 - 49499568
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||| |||||||||| | | |||||||||||| |||||    
T  49499512 tgaactcaaaatatcatgaaaataacactaaaaacagcgaatgactgactgtcatca 49499568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 31204070 - 31204021
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgact 533  Q
    ||||||||||| || ||||||||||||||||||||||  |||||||||||    
T  31204070 tgaactcaaaacataatgaaaatgacactaaaaataaagaatgactgact 31204021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 265; Significance: 1e-147; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 9 - 424
Target Start/End: Complemental strand, 32837607 - 32837199
Alignment:
Q  9 cttttcccatatgcttccttcctctctgccgaaaacgtgattgctgaaagtagctttgtgccaagccatcaatcttctt-ttctttgtgtcacttgcttc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || | || |||||||||||||||||    
T  32837607 cttttcccatatgcttccttcctctctgccgaaaacgtgattgctgaaagtcgctttgtgccaagccgtcaatcctcctcttatttgtgtcacttgcttc 32837508  T
Q  108 cnnnnnnnacaggttcaggtaacctagctagtttcttt----tctttcacgggtcaacaccaaaatgattgggtcaaagcccatttgtttttatttttct 203  Q
    |       | ||||||||||||||||||||||||||||    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32837507 cttttt--ataggttcaggtaacctagctagtttctttcttttctttcacgagtcaacaccaaaatggttgggtcaaagcccatttgtttttatttttct 32837410  T
Q  204 attt-ccaattgccaagcatatgccgtaagtgtggctatatgatggctatatgataattaagccatgataattttttagcttcactcttaagcacttcaa 302  Q
    |||| |||||||||||||||||||||||||||||||||||||||           |||||||||||||||| ||||||||||||||||||||||||||||    
T  32837409 attttccaattgccaagcatatgccgtaagtgtggctatatgat-----------aattaagccatgataaatttttagcttcactcttaagcacttcaa 32837321  T
Q  303 agtatgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaac 402  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  32837320 agtatgtcacatgtccctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaaactcatcctatgctccaaatcgtgacac 32837221  T
Q  403 gttttcaacaatcgtgacacga 424  Q
    ||||||||||||| ||||||||    
T  32837220 gttttcaacaatcatgacacga 32837199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 42061719 - 42061602
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||| ||||||    
T  42061719 tgccacatgtccctaaaatcatgtcacgaaatagctatcgtgacacgatttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgacacgttt 42061620  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  42061619 tcaacaatcgtgacacga 42061602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 37214999 - 37214882
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||    
T  37214999 tgccacatgttcctaaaatcgtgtcacgaaatagccatcatgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacatgttt 37214900  T
Q  407 tcaacaatcgtgacacga 424  Q
    |||||||| |||| ||||    
T  37214899 tcaacaattgtgatacga 37214882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 21336499 - 21336605
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||||| |||    
T  21336499 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgctctaaatcgtgacatgttttcaacaaccgt 21336598  T
Q  418 gacacga 424  Q
    |||||||    
T  21336599 gacacga 21336605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 43491026 - 43490909
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||| | ||||||||||||||| |||||| |||||||| ||||||    
T  43491026 tgccacatgtccctaaaatcgtgttacgaaatagacatcgtgatacgttttaaccaatgccaaatgaacctcatcctgtgctcctaatcgtgacacgttt 43490927  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  43490926 tcaacaatcgtgacacga 43490909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 307 - 422
Target Start/End: Original strand, 28441948 - 28442063
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||||||| ||||||| || ||||||||||||| ||||| ||||||||| ||||||    
T  28441948 tgccacatgtccttaaaatcgtgtcacgaaatagccatcatgacacgttttagccaatgttgagtgaacctcatcctgtgctctaaatcgtgacacgttt 28442047  T
Q  407 tcaacaatcgtgacac 422  Q
    ||||||||||||||||    
T  28442048 tcaacaatcgtgacac 28442063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 21827798 - 21827904
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||| |||| |||||||| |||    
T  21827798 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttctaaatcgtgacacgtattcaacaaccgt 21827897  T
Q  418 gacacga 424  Q
    |||||||    
T  21827898 gacacga 21827904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 22937833 - 22937939
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||    
T  22937833 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaatcaatgtcgaatgaacctcatcttgtgctccaaatcgtgatacgttttcaacaaccgt 22937932  T
Q  418 gacacga 424  Q
    | |||||    
T  22937933 ggcacga 22937939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 28788167 - 28788267
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  28788167 tgccacatgtttctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaataaacctcatcctatgttccaaatcgtgacacgttt 28788266  T
Q  407 t 407  Q
    |    
T  28788267 t 28788267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 320 - 424
Target Start/End: Complemental strand, 31863092 - 31862988
Alignment:
Q  320 taaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgtga 419  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||| | ||||| ||||||||| |||||||||||||||||||    
T  31863092 taaaatcgtgtcacgaaatagccatcgtgacacgatttaaacaatgtcgaatgaacttcatcatgtgctctaaatcgtgacacgttttcaacaatcgtga 31862993  T
Q  420 cacga 424  Q
    |||||    
T  31862992 cacga 31862988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 39191561 - 39191447
Alignment:
Q  310 cacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttca 409  Q
    ||||||| | ||||||||||| |||||||||  || ||||||||||||||||||| |||||| ||||||||||| | ||  |||| |||| |||||||||    
T  39191561 cacatgttcttaaaatcgtgttacgaaatagacattgtgacacgttttaaccaatatcgaataaacctcatcctgtactttaaattgtgacacgttttca 39191462  T
Q  410 acaatcgtgacacga 424  Q
    |||||||||||||||    
T  39191461 acaatcgtgacacga 39191447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 14376638 - 14376713
Alignment:
Q  323 aatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtga 399  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  14376638 aatcgtgtcacgaaatagccatcgtgacacgttttaa-caatgtcgaatgaacctcatcctgtgcttcaaatcgtga 14376713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 21333483 - 21333540
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaac 375  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21333483 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaac 21333540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 320 - 374
Target Start/End: Original strand, 40916667 - 40916721
Alignment:
Q  320 taaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaa 374  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40916667 taaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaa 40916721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 28442125 - 28442184
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcactt 543  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||    
T  28442125 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcactt 28442184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 14376778 - 14376834
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  14376778 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 14376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 31862928 - 31862872
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||| |||||    
T  31862928 tgaactcaaaatattatgaaaatgacactaaaaataaggaatgactgactgtcatca 31862872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 42061542 - 42061486
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||||||||||||||| |   |||||||||||| |||||    
T  42061542 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 42061486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 2e-73; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 179 - 424
Target Start/End: Complemental strand, 2371764 - 2371529
Alignment:
Q  179 aaagcccatttgtttttatttttctattt-ccaattgccaagcatatgccgtaagtgtggctatatgatggctatatgataattaagccatgataatttt 277  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||           ||||||||||||||||  ||    
T  2371764 aaagcccatttgtttttattttactattttccaattgccaagcatataccgtaagtgtggctatatgat-----------aattaagccatgataaaatt 2371676  T
Q  278 ttagcttcactcttaagcacttcaaagtatgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacct 377  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2371675 tcagcttcactcttaagcacttcaaagtatgccacatgtccctaaaatcgtgtcacgaaatagccatcatgacacgttttaaccaatgtcgaatgaacct 2371576  T
Q  378 catcctatgctccaaatcgtgaaacgttttcaacaatcgtgacacga 424  Q
    | |||| ||||| |||||  || || |||||||||||||||| ||||    
T  2371575 cgtcctgtgctctaaatctcgatacattttcaacaatcgtgatacga 2371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 307 - 421
Target Start/End: Complemental strand, 9953269 - 9953155
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  9953269 tgccacatgttcctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcattctgtgctccaaatcgtgacacgttt 9953170  T
Q  407 tcaacaatcgtgaca 421  Q
    |||||||||||||||    
T  9953169 tcaacaatcgtgaca 9953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 307 - 422
Target Start/End: Complemental strand, 34501647 - 34501532
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  34501647 tgccacatgtccctaaaattgtgtcatgaaatagccatcgtgacacgttttagctaatgtcgaatgaacctcatcctatgctccaaatcgtgacacgttt 34501548  T
Q  407 tcaacaatcgtgacac 422  Q
    ||||||||||||||||    
T  34501547 tcaacaatcgtgacac 34501532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 307 - 422
Target Start/End: Original strand, 23379580 - 23379695
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||| ||||||    
T  23379580 tgccacatgttcctagaatcgtgtcacgaaatagctatcgtgacacgttttaatcaatgtcgagtgaacctcatcatgtgctccaaatcgtgacacgttt 23379679  T
Q  407 tcaacaatcgtgacac 422  Q
    ||||||||||||||||    
T  23379680 tcaacaatcgtgacac 23379695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 307 - 422
Target Start/End: Original strand, 23388919 - 23389034
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||| ||||||    
T  23388919 tgccacatgttcctagaatcgtgtcacgaaatagctatcgtgacacgttttaatcaatgtcgagtgaacctcatcatgtgctccaaatcgtgacacgttt 23389018  T
Q  407 tcaacaatcgtgacac 422  Q
    ||||||||||||||||    
T  23389019 tcaacaatcgtgacac 23389034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 5738967 - 5739073
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||    
T  5738967 cctaaaatcgtgtcacgaaatagccatcgtgacgcgttttaaccaatgtcgaatgaacctcatcctttgctccaaatcgtgacatgtttttaacaatcgt 5739066  T
Q  418 gacacga 424  Q
    |||||||    
T  5739067 gacacga 5739073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 2371934 - 2371886
Alignment:
Q  9 cttttcccatatgcttccttcctctctgccgaaaacgtgattgctgaaa 57  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  2371934 ctttttccatatgcttccttcctctctgccgaaaacgtgattgccgaaa 2371886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 31071550 - 31071494
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||||| |||||    
T  31071550 tgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactgtcatca 31071494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 534
Target Start/End: Original strand, 23379758 - 23379808
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactg 534  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  23379758 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactg 23379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 534
Target Start/End: Original strand, 23389097 - 23389147
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactg 534  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  23389097 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactg 23389147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 4e-50; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 5721738 - 5721855
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  5721738 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttt 5721837  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  5721838 tcaacaatcgtgacacga 5721855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 15431397 - 15431280
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  15431397 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacgttt 15431298  T
Q  407 tcaacaatcgtgacacga 424  Q
    || |||||||||||||||    
T  15431297 tcgacaatcgtgacacga 15431280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 15438011 - 15437894
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  15438011 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacgttt 15437912  T
Q  407 tcaacaatcgtgacacga 424  Q
    || |||||||||||||||    
T  15437911 tcgacaatcgtgacacga 15437894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 18910837 - 18910720
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||||    
T  18910837 tgccacatgtccctaaaatcgtgtcatgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacgttt 18910738  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  18910737 tcaacaatcgtgacacga 18910720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 318 - 422
Target Start/End: Original strand, 19861065 - 19861169
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  19861065 cctaaaatcgtgtcacgaaatagccatcttgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgatacgttttcaacaatcgt 19861164  T
Q  418 gacac 422  Q
    |||||    
T  19861165 gacac 19861169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 311 - 421
Target Start/End: Original strand, 3798567 - 3798677
Alignment:
Q  311 acatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaa 410  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| || |||||||    
T  3798567 acatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctttgttccaaatcgtgacacattttcaa 3798666  T
Q  411 caatcgtgaca 421  Q
    |||||||||||    
T  3798667 caatcgtgaca 3798677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 9717184 - 9717067
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| ||||| |||| |||  ||||||    
T  9717184 tgccacatgtccctaaaatcgtgtcacgaaagagccatcgtgacacgatttaaccaatgtcgaacgaacctcatcctgtgctctaaattgtgccacgttt 9717085  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  9717084 tcaacaatcgtgacacga 9717067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 307 - 421
Target Start/End: Complemental strand, 5680702 - 5680588
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| ||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||    
T  5680702 tgccacatgttcctaaaatcgtgtcaagaaatagcaaaagtgacacgttttaaccaatgtcgaatgaacctcattctatgctctaaattgtgacacgttt 5680603  T
Q  407 tcaacaatcgtgaca 421  Q
    |||||||||||||||    
T  5680602 tcaacaatcgtgaca 5680588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 33410740 - 33410846
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | |||| |||||||| | |||||||||||||||||    
T  33410740 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcaccttgtgcttcaaatcgtaacacgttttcaacaatcgt 33410839  T
Q  418 gacacga 424  Q
    |||||||    
T  33410840 gacacga 33410846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 307 - 399
Target Start/End: Original strand, 37104028 - 37104120
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtga 399  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  37104028 tgccacatgtccctaaaatcgtgtcacgaaatagccatcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtga 37104120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 19865421 - 19865527
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||    
T  19865421 cctaaaatcgtgtcacgaaatagccatcttagcacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgatacattttcaataatcgt 19865520  T
Q  418 gacacga 424  Q
    |||||||    
T  19865521 gacacga 19865527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 53093941 - 53093837
Alignment:
Q  319 ctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgtg 418  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  53093941 ctaaaatcgtgtcacgaaatagccatcgtgacacgttcta-ccaatgtcgaatgaacctcatcctgtgctccaattcgtgacacgttttcaacaatcgtg 53093843  T
Q  419 acacga 424  Q
     |||||    
T  53093842 tcacga 53093837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 40617590 - 40617696
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| | || || ||||||||| |||||||||||||||||    
T  40617590 cctaaaatcgtgtcacgaaatagccatcgtgactcgttttaatcaatgtcgaatgaacctcatcttgtgttctaaatcgtgacacgttttcaacaatcgt 40617689  T
Q  418 gacacga 424  Q
    | |||||    
T  40617690 ggcacga 40617696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 320 - 424
Target Start/End: Complemental strand, 5669848 - 5669744
Alignment:
Q  320 taaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgtga 419  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||  | || | ||||| |||| |||||||||||||||||||    
T  5669848 taaaatcgtgtcacgaaatagccaccgtgacacgttttaaccaatgtcgaataaacctcattttgtgtttcaaattgtgacacgttttcaacaatcgtga 5669749  T
Q  420 cacga 424  Q
    |||||    
T  5669748 cacga 5669744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 49269956 - 49269851
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||  | | || |||||||||| |||||||||||||||||    
T  49269956 cctaaaatcgtgtcacgaaatagc-attgtgacacgttttaaccaatgtcgaatgaatctcattttgttcttcaaatcgtgacacgttttcaacaatcgt 49269858  T
Q  418 gacacga 424  Q
    || ||||    
T  49269857 gatacga 49269851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 12237576 - 12237470
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| |  |  |||| |||| || ||||| ||||||||    
T  12237576 cctaaaatcgtgtcacgaaatagccatcgtgacatattttaaccaatgtcgaatgaacctcatcctgtattttaaattgtgacacattttcgacaatcgt 12237477  T
Q  418 gacacga 424  Q
    |||||||    
T  12237476 gacacga 12237470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 27013452 - 27013396
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaa 374  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27013452 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaa 27013396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 56198085 - 56198028
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||    
T  56198085 tgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactgactgtcatcac 56198028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 484 - 542
Target Start/End: Complemental strand, 5669684 - 5669626
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcact 542  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||    
T  5669684 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcact 5669626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 541
Target Start/End: Original strand, 3798740 - 3798797
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  3798740 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 3798797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 541
Target Start/End: Original strand, 33410906 - 33410963
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  33410906 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 33410963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 18910660 - 18910604
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  18910660 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 18910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 56194778 - 56194722
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||    
T  56194778 tgaactcaaaacatcatgaaaatgacactaaaaataacgaatgattgactgtcatca 56194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 15405842 - 15405891
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgact 533  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  15405842 tgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgact 15405891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 9717007 - 9716951
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||||||||||||||||   |||||| ||||| |||||    
T  9717007 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgaccgactgtcatca 9716951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 19865587 - 19865643
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||||||||||||||| |   |||||||||||| |||||    
T  19865587 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 19865643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 33926177 - 33926121
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||||||||| |||||    
T  33926177 tgaactcaagacatcatgcaaatgacactaaaagtaacaaatgactgactgtcatca 33926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 47114832 - 47114776
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||| || ||||||||||||||||||||||  |||||||||||| |||||    
T  47114832 tgaactcaaaacataatgaaaatgacactaaaaataaagaatgactgactgtcatca 47114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 19861231 - 19861286
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatc 539  Q
    |||||||||||||||||||||||||||||||||| |   |||||||| ||||||||    
T  19861231 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgtctgccatc 19861286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 12237410 - 12237377
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaa 517  Q
    ||||||||||||||||||||||||||||||||||    
T  12237410 tgaactcaaaatatcatgaaaatgacactaaaaa 12237377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 15431220 - 15431164
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||| ||| |||||||||   |||||||||||| |||||    
T  15431220 tgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15431164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 15437834 - 15437778
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||| ||| |||||||||   |||||||||||| |||||    
T  15437834 tgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 372
Target Start/End: Original strand, 48014721 - 48014772
Alignment:
Q  321 aaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatg 372  Q
    ||||| ||||||||||||||| ||| ||||||||||| | ||||||||||||    
T  48014721 aaaattgtgtcacgaaatagccatcatgacacgttttcatcaatgtcgaatg 48014772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 4e-50; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 18645508 - 18645625
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  18645508 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttt 18645607  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  18645608 tcaacaatcgtgacacga 18645625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 35411910 - 35411793
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  35411910 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgttccaaatcgtgacacgttt 35411811  T
Q  407 tcaacaatcgtgacacga 424  Q
    || |||||||||||||||    
T  35411810 tcgacaatcgtgacacga 35411793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 538248 - 538131
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||| ||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||| || ||||||||||||||| ||||||    
T  538248 tgccatatgtccctaaaatcgtgtcacgaaataaccatcgtaacacgttttaaccaatgtcgaatgaacttcattctgtgctccaaatcgtgacacgttt 538149  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  538148 tcaacaatcgtgacacga 538131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 6922123 - 6922006
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||| ||||||    
T  6922123 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttcaccaatgttgaatgaacctcatcatgtgctccaaatcgtgacacgttt 6922024  T
Q  407 tcaacaatcgtgacacga 424  Q
    || |||||||||||||||    
T  6922023 tcgacaatcgtgacacga 6922006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 16185423 - 16185540
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||| ||| ||||| | ||||    
T  16185423 tgccacatgtccctaaaatcgtgtcacgaaatagccatcgtgacacgttttagccaatgtcgagtgaacctcatcctgtgctctaaaacgtgacatgttt 16185522  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  16185523 tcaacaatcgtgacacga 16185540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 23299320 - 23299437
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||| |||| ||||||    
T  23299320 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaatcaatgtcgaatgaacctcatcttgtgctccaaattgtgacacgttt 23299419  T
Q  407 tcaacaatcgtgacacga 424  Q
    || |||||||||||||||    
T  23299420 tcgacaatcgtgacacga 23299437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 10884251 - 10884134
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||||||||||||| ||||| |||| |||||||||| | ||||    
T  10884251 tgccacatgtccctaaaatcgtgtcacgaaatggccatcatgacacgttttaatcaatgtcgaatgaacctaatcctgtgcttcaaatcgtgacaggttt 10884152  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  10884151 tcaacaatcgtgacacga 10884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 52198527 - 52198424
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||    
T  52198527 cctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacgttttcaacaatcgt 52198428  T
Q  418 gaca 421  Q
    ||||    
T  52198427 gaca 52198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 307 - 407
Target Start/End: Complemental strand, 53815205 - 53815105
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  53815205 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctatgtttcaaatcgtgacacgttt 53815106  T
Q  407 t 407  Q
    |    
T  53815105 t 53815105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 6445439 - 6445546
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacg-ttttcaacaatcg 416  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||| ||||||  |||||    
T  6445439 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgacacgtttttcagtaatcg 6445538  T
Q  417 tgacacga 424  Q
    ||||||||    
T  6445539 tgacacga 6445546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 307 - 395
Target Start/End: Original strand, 17532484 - 17532572
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatc 395  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  17532484 tgccacatgttcctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccaatatcgaatgaacctcatcctgtgctcaaaatc 17532572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 320 - 419
Target Start/End: Original strand, 54736631 - 54736730
Alignment:
Q  320 taaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgtga 419  Q
    |||||||||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||||||| ||||| |||| | ||||| |||||||||||    
T  54736631 taaaatcgtgtcacgaaatagacatcgtgacacgttttaaccaataccgaatgaacctcatcctatgcttcaaattgtgacatgtttttaacaatcgtga 54736730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 54460609 - 54460492
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacg-tt 405  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||| ||| ||    
T  54460609 tgccacatgttcttaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatcttgaatgaa-ctcatcctatgttccaaatcgtgacacgctt 54460511  T
Q  406 ttcaacaatcgtgacacga 424  Q
    || |  |||||||||||||    
T  54460510 tttagtaatcgtgacacga 54460492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 318 - 399
Target Start/End: Original strand, 55032715 - 55032796
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtga 399  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  55032715 cctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtga 55032796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 28265223 - 28265116
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaac-gttttcaacaatcg 416  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| | |||| |||||||||| ||  ||||||  |||||    
T  28265223 cctaaaatcgtgtcacgaaatagccaccgtgacacgttttaaccaatgtcgaatgaacttcatcatgtgcttcaaatcgtgacacatttttcagtaatcg 28265124  T
Q  417 tgacacga 424  Q
    ||||||||    
T  28265123 tgacacga 28265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 307 - 404
Target Start/End: Original strand, 10107394 - 10107491
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgt 404  Q
    ||||| ||||||||||||||||||||||||||| | ||||| || |||||||||||||||| ||| ||| |||| || ||||||||| ||||| ||||    
T  10107394 tgccatatgtccctaaaatcgtgtcacgaaataaccatcgtaacgcgttttaaccaatgtcaaattaacttcattctgtgctccaaaccgtgacacgt 10107491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 8462325 - 8462392
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaa 374  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  8462325 tgccacgtgtccttaaaatcgtgtcacgaaatagccatcgtgatacgttttaatcaatgtcgaatgaa 8462392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 9392108 - 9392057
Alignment:
Q  320 taaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaat 371  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9392108 taaaatcgtgtcacgaaatagccatcgtgacacgttttagccaatgtcgaat 9392057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 10107558 - 10107614
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||||||||||||||| |   |||||||||||| |||||    
T  10107558 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 10107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 52198361 - 52198305
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||||||||||||| |||   |||||||||||| |||||    
T  52198361 tgaactcaaaatatcatgaaaatgacactaaacatagtgaatgactgactgtcatca 52198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 9380198 - 9380147
Alignment:
Q  373 aacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgtgacacga 424  Q
    ||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||    
T  9380198 aacctcatcctgtgctctaaatcgtgacacgttttcaacaaccgtgacacga 9380147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 23299497 - 23299556
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcactt 543  Q
    |||||||||||||||||||||| ||| |||||||||   |||||||||||| ||||||||    
T  23299497 tgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcactt 23299556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 534
Target Start/End: Original strand, 17532613 - 17532663
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactg 534  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  17532613 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactg 17532663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 10884074 - 10884017
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    |||||||||||||||||||||| ||| |||||||||   |||||||||||| ||||||    
T  10884074 tgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 10884017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 538071 - 538015
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||| ||| |||||||||   |||||||||||| |||||    
T  538071 tgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 9e-48; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 8276245 - 8276128
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  8276245 tgccacatgtccctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgatacgttt 8276146  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||| ||||||||    
T  8276145 tcaacaatcatgacacga 8276128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 307 - 422
Target Start/End: Complemental strand, 10431619 - 10431504
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||| ||||||||| ||||||    
T  10431619 tgccacatgtccctaaaatcgtgtcacgaaatagccatcgtgacacgttttagccaatgtcgagtgaacctcatcctgtgctctaaatcgtgacacgttt 10431520  T
Q  407 tcaacaatcgtgacac 422  Q
    ||||||||||||||||    
T  10431519 tcaacaatcgtgacac 10431504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 26556743 - 26556626
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||||| ||||||    
T  26556743 tgccacatgtccctaaaatcgtgtcatgaaatagccatcgtgacacgttttaaccaatgtcgaataaacctcatcatgtgctctaaatcgtgacacgttt 26556644  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  26556643 tcaacaatcgtgacacga 26556626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 2442045 - 2442161
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||| ||||||||||||| |||||||||| ||||||    
T  2442045 tgccacatgtccctaaaatcgtgtcacgaaatagccatcgtgatacgttttagccaatgtcgagtgaa-ctcatcctatgcttcaaatcgtgatacgttt 2442143  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  2442144 tcaacaatcgtgacacga 2442161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 45287904 - 45288004
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  45287904 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcttatgttccaaatcgtgacacgttt 45288003  T
Q  407 t 407  Q
    |    
T  45288004 t 45288004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 45291240 - 45291340
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  45291240 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcattctatgttccaaatcgtgacacgttt 45291339  T
Q  407 t 407  Q
    |    
T  45291340 t 45291340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 307 - 422
Target Start/End: Complemental strand, 4542306 - 4542192
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||| || |||    
T  4542306 tgccacatgttcctaaaattgtgtcacgaaatatccatcgtgacaagttttaaccaatgtcgaatgaa-ctcatcctatgctccaaatcatgacacattt 4542208  T
Q  407 tcaacaatcgtgacac 422  Q
    ||||||||||||||||    
T  4542207 tcaacaatcgtgacac 4542192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 4542130 - 4542073
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  4542130 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 4542073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 10431442 - 10431386
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  10431442 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 10431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 16164945 - 16164889
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||    
T  16164945 tgaactcaaaacatcatgaaaattacactaaaaataacgaatgactgactgtcatca 16164889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 26556566 - 26556510
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  26556566 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 26556510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 48645865 - 48645921
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||||| |||||    
T  48645865 tgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactgtcatca 48645921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 595 - 660
Target Start/End: Original strand, 39911054 - 39911119
Alignment:
Q  595 tgagcggctaaatttatctcttatttcccctagagcaggagttgaccctcccttatctcgtgatcc 660  Q
    ||||||||||||||| ||||||||| ||||||| |||| |||||||||||| |  |||||||||||    
T  39911054 tgagcggctaaatttttctcttattgcccctagtgcagaagttgaccctccatcgtctcgtgatcc 39911119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 2442221 - 2442277
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||||||||| ||||||   |||||||||||| |||||    
T  2442221 tgaactcaaaatatcatgaaaatgacacttaaaatagtgaatgactgactgtcatca 2442277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 48644672 - 48644616
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||| || ||||||||||||||||||||||  |||||||||||| |||||    
T  48644672 tgaactcaaaacattatgaaaatgacactaaaaataaagaatgactgactgtcatca 48644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 6602677 - 6602621
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||| |||| || ||||| ||||||||||||||||| |||||||||||| |||||    
T  6602677 tgaacttaaaacattatgaacatgacactaaaaataacgaatgactgactgtcatca 6602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 2e-45; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 26358905 - 26358788
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||  ||||||    
T  26358905 tgccacatgtccctaaaatcgtgtcacgaaatagccatcgtgacacgatttaaccaatgccgaatgaacctcatcctgtgctccaaatcgtgccacgttt 26358806  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  26358805 tcaacaatcgtgacacga 26358788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 38006053 - 38006170
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  38006053 tgccacatgttcctgaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacgttt 38006152  T
Q  407 tcaacaatcgtgacacga 424  Q
    || |||||||| ||||||    
T  38006153 tcgacaatcgtcacacga 38006170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 309 - 424
Target Start/End: Complemental strand, 25873434 - 25873319
Alignment:
Q  309 ccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttc 408  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  25873434 ccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacggtttaaccaatgtcgaatgaacctcatcctgtgctccaaatcatgacacgttttc 25873335  T
Q  409 aacaatcgtgacacga 424  Q
     |||||||||||||||    
T  25873334 gacaatcgtgacacga 25873319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 307 - 422
Target Start/End: Original strand, 36809202 - 36809317
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    ||||| |||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  36809202 tgccaaatgttcctaaaatcgtgtcacaaaatagccatcgtgacacgttttaaccaatgtcgaatgaatctcatcctgtgctccaaatcgtgacacgttt 36809301  T
Q  407 tcaacaatcgtgacac 422  Q
    ||||||||||||||||    
T  36809302 tcaacaatcgtgacac 36809317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 25821684 - 25821801
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||| || |||    
T  25821684 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgttccaaatcgtgacaccttt 25821783  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||| ||||||||    
T  25821784 tcaacaatcttgacacga 25821801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 25870068 - 25869951
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  25870068 tgccacatgttcctaaaatcgtatcacgaaatagccatcgtgacacgttttaatcaatgtcgaatgaacttcatcctgtgctccaaatcgtgacacgttt 25869969  T
Q  407 tcaacaatcgtgacacga 424  Q
    || |||||||||||||||    
T  25869968 tcgacaatcgtgacacga 25869951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 307 - 407
Target Start/End: Complemental strand, 10600196 - 10600096
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  10600196 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgttccaaatcgtgacacgttt 10600097  T
Q  407 t 407  Q
    |    
T  10600096 t 10600096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 320 - 424
Target Start/End: Original strand, 30275472 - 30275575
Alignment:
Q  320 taaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgtga 419  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  30275472 taaaatcgtgtcacgaaataaccatcgtgacacgttttaaccaatgtcgaatgaa-ctcatcctacgctccaaatcgtgacacgttttcaacaatcgtga 30275570  T
Q  420 cacga 424  Q
    |||||    
T  30275571 cacga 30275575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 25139818 - 25139924
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||| | ||||||||||||||| ||||| |||||||||||    
T  25139818 cctaaaatcgtgtcacgaaatagccattgtgacacgttttaactaatgtctaatgaacctcatcttgtgctccaaatcgtgacacgttgtcaacaatcgt 25139917  T
Q  418 gacacga 424  Q
    |||||||    
T  25139918 gacacga 25139924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 305 - 399
Target Start/End: Complemental strand, 29439810 - 29439716
Alignment:
Q  305 tatgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtga 399  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||| ||||||||||    
T  29439810 tatgccacatgtccctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatatcgaatgaacttcatcctgtgcttcaaatcgtga 29439716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 16788609 - 16788504
Alignment:
Q  319 ctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgtg 418  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||  ||||||  |||| ||||||||| ||||||||||||||||||    
T  16788609 ctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatatcgaataaactccatcctgcgctctaaatcgtgacacgttttcaacaatcgtg 16788510  T
Q  419 acacga 424  Q
    ||||||    
T  16788509 acacga 16788504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 484 - 534
Target Start/End: Original strand, 36985679 - 36985729
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactg 534  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  36985679 tgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactgactg 36985729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 26358728 - 26358671
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  26358728 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 26358671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 36809379 - 36809435
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  36809379 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 36809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 15466226 - 15466170
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||| || |||||    
T  15466226 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgattgtcatca 15466170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 534
Target Start/End: Original strand, 38006230 - 38006280
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactg 534  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  38006230 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactg 38006280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 25873259 - 25873202
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    |||||||||||||||||||||| ||| |||||||||   |||||||||||| ||||||    
T  25873259 tgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 25873202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 30275635 - 30275684
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgact 533  Q
    |||| |||||||||||||||||||||||||||||||   |||||||||||    
T  30275635 tgaattcaaaatatcatgaaaatgacactaaaaatattgaatgactgact 30275684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 45456356 - 45456299
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    ||||||||||| |||||||||||||||||||||||||  |||| |||| || ||||||    
T  45456356 tgaactcaaaacatcatgaaaatgacactaaaaataaagaatggctgattgtcatcac 45456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 25869891 - 25869835
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||| ||| |||||||||   |||||||||||| |||||    
T  25869891 tgaactcaaaatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 25869835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 45453107 - 45453051
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||| |||||||||||||| ||||||||||  ||||||||| || |||||    
T  45453107 tgaactcaaaacatcatgaaaatgaccctaaaaataaagaatgactgattgtcatca 45453051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 534
Target Start/End: Complemental strand, 13136810 - 13136768
Alignment:
Q  491 aaaatatcatgaaaatgacactaaaaataacaaatgactgactg 534  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  13136810 aaaatatcat-aaaatgactctaaaaataacaaatgactgactg 13136768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 30925969 - 30925919
Alignment:
Q  322 aaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatg 372  Q
    ||||||||||||||| |||| |||||||||||||||   ||||||||||||    
T  30925969 aaatcgtgtcacgaattagccatcgtgacacgttttgctcaatgtcgaatg 30925919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 92; Significance: 3e-44; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 307 - 422
Target Start/End: Complemental strand, 291196 - 291081
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  291196 tgccacatgtccctaaaatcgtgttacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaaccttatcctgtgctccaaatcgtgacacgttt 291097  T
Q  407 tcaacaatcgtgacac 422  Q
    ||||||||||||||||    
T  291096 tcaacaatcgtgacac 291081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 519
Target Start/End: Complemental strand, 291019 - 290984
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaata 519  Q
    |||||| |||||||||||||||||||||||||||||    
T  291019 tgaacttaaaatatcatgaaaatgacactaaaaata 290984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 26478 - 26361
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  26478 tgccccatgtccctaaaaccgtgttacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttt 26379  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  26378 tcaacaatcgtgacacga 26361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 5e-43; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 25595455 - 25595568
Alignment:
Q  311 acatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaa 410  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  25595455 acatgttcctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgacacgttttcaa 25595554  T
Q  411 caatcgtgacacga 424  Q
    ||||||||||||||    
T  25595555 caatcgtgacacga 25595568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 45156685 - 45156802
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |||    
T  45156685 tgccacatgttcctaaaatcgtgtcacgaaatagccattgtgacacgttttaatcaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacattt 45156784  T
Q  407 tcaacaatcgtgacacga 424  Q
    ||||||||||||||||||    
T  45156785 tcaacaatcgtgacacga 45156802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 312 - 424
Target Start/End: Original strand, 43682569 - 43682681
Alignment:
Q  312 catgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaac 411  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || ||||||| |||| ||||||||||     
T  43682569 catgtccctaaaatcgtgtcacgaaatagccgtcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttccaaattgtgacacgttttcaat 43682668  T
Q  412 aatcgtgacacga 424  Q
    |||||||||||||    
T  43682669 aatcgtgacacga 43682681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 5540773 - 5540876
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  5540773 cctaaaatcatgtcacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttttcaacaatcgt 5540872  T
Q  418 gaca 421  Q
    ||||    
T  5540873 gaca 5540876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 306 - 424
Target Start/End: Complemental strand, 25228246 - 25228128
Alignment:
Q  306 atgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgtt 405  Q
    |||||| || |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  25228246 atgccatatatccctaaaatcgtgtcacgaaataaccatcgtaacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgacacgtt 25228147  T
Q  406 ttcaacaatcgtgacacga 424  Q
    |||| |||||| |||||||    
T  25228146 ttcagcaatcgagacacga 25228128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 18722081 - 18722193
Alignment:
Q  311 acatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaa 410  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||| || ||||||||||||||| ||||||||||    
T  18722081 acatgttcctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccgatatcgaatgaacctcat-ctgtgctccaaatcgtgacacgttttcaa 18722179  T
Q  411 caatcgtgacacga 424  Q
    ||||||||||||||    
T  18722180 caatcgtgacacga 18722193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 25592270 - 25592383
Alignment:
Q  311 acatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaa 410  Q
    |||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| | |||||||||||| || || |||||||    
T  25592270 acatgttcctaaaatcgtgtcacgaaatagtcatcgtaacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgggacacattttcaa 25592369  T
Q  411 caatcgtgacacga 424  Q
    ||||||||||||||    
T  25592370 caatcgtgacacga 25592383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 33878009 - 33878122
Alignment:
Q  311 acatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaa 410  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || || || |||| |||| ||||||||||    
T  33878009 acatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaataaacctcattctgtgttctaaattgtgacacgttttcaa 33878108  T
Q  411 caatcgtgacacga 424  Q
    ||||||||||||||    
T  33878109 caatcgtgacacga 33878122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 20520173 - 20520079
Alignment:
Q  319 ctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaa 413  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||    
T  20520173 ctaaaatcgtgtcacgaaatagccattgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttccaaatcgtgacacgttttcaacaa 20520079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 17895295 - 17895402
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacg-ttttcaacaatcg 416  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||| ||||||  |||||    
T  17895295 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgacacgtttttcagtaatcg 17895394  T
Q  417 tgacacga 424  Q
    ||||||||    
T  17895395 tgacacga 17895402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 10663233 - 10663127
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||  | ||||||||||| ||| | |||||||||||||||    
T  10663233 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgctccaaatcatgacatgttttcaacaatcgt 10663134  T
Q  418 gacacga 424  Q
    |||||||    
T  10663133 gacacga 10663127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 14421068 - 14420980
Alignment:
Q  336 aatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgtgacacga 424  Q
    ||||||||||||| ||||||||| ||||||| || ||||||||||||| || |||||||||||| ||||||||||||||||||| ||||    
T  14421068 aatagctatcgtgtcacgttttagccaatgttgagtgaacctcatcctgtgttccaaatcgtgacacgttttcaacaatcgtgatacga 14420980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 30640739 - 30640625
Alignment:
Q  310 cacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttca 409  Q
    ||||||| | |||||||| |||||||||||   ||||| ||||||||||||||||  |||| |||| ||||| | || ||||||  |||| |||||||||    
T  30640739 cacatgttcttaaaatcgcgtcacgaaatacacatcgttacacgttttaaccaataccgaaagaacttcatcttgtgatccaaagtgtgacacgttttca 30640640  T
Q  410 acaatcgtgacacga 424  Q
    |||||||||||||||    
T  30640639 acaatcgtgacacga 30640625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 23612801 - 23612745
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaa 374  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  23612801 cctaaaatcgtgtcacgaaatagccattgtgacacgttttaaacaatgtcgaatgaa 23612745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 541
Target Start/End: Original strand, 33878182 - 33878239
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  33878182 tgaactcaaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcac 33878239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 534
Target Start/End: Original strand, 25595629 - 25595679
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactg 534  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  25595629 tgaactcaaaatatcatgaaaatgacactaaaaacaatgaatgactgactg 25595679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 18722254 - 18722310
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||||||||||||||| |   |||||||||||| |||||    
T  18722254 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 18722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 534
Target Start/End: Original strand, 25592444 - 25592494
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactg 534  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||||    
T  25592444 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactg 25592494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 529
Target Start/End: Original strand, 14589760 - 14589805
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgact 529  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||    
T  14589760 tgaactcaaaacatcatgaaaatgacactaaaaataatgaatgact 14589805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 43682741 - 43682798
Alignment:
Q  484 tgaactcaaaatatcatgaaaa-tgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||    
T  43682741 tgaactcaaaatatcatgaaaaatgatactaaaaatagtgaatgactgactgccatca 43682798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 23612625 - 23612569
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||| |||| ||||||||||||||||||   |||||||||||| |||||    
T  23612625 tgaactcaaaatctcatcaaaatgacactaaaaatagtgaatgactgactgtcatca 23612569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 10663067 - 10663010
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatcac 541  Q
    ||||||||| |||||||||||| ||| |||||||||   |||||||||||| ||||||    
T  10663067 tgaactcaacatatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 10663010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 307 - 414
Target Start/End: Complemental strand, 197464 - 197357
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttt 406  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||| ||||||    
T  197464 tgccacatgtccctaaaatcgtgtcatgaaatagccatcgtgacacattttaatcaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttt 197365  T
Q  407 tcaacaat 414  Q
    ||||||||    
T  197364 tcaacaat 197357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 61819 - 61713
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacgttttcaacaatcgt 417  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | || | |||||||||| |||||||| ||||||||    
T  61819 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcttgtgtttcaaatcgtgacacgttttcgacaatcgt 61720  T
Q  418 gacacga 424  Q
    |||||||    
T  61719 gacacga 61713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 61653 - 61597
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||||||||||||||| |   |||||||||||| |||||    
T  61653 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 61597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 75; Significance: 5e-34; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 4186 - 4304
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacg-tt 405  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||| ||| ||    
T  4186 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaaccttatccaatattccaaatcgtgacacgctt 4285  T
Q  406 ttcaacaatcgtgacacga 424  Q
    ||||  |||||||||||||    
T  4286 ttcagtaatcgtgacacga 4304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 11316 - 11434
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaacg-tt 405  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||| ||| ||    
T  11316 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaaccttatccaatattccaaatcgtgacacgctt 11415  T
Q  406 ttcaacaatcgtgacacga 424  Q
    ||||  |||||||||||||    
T  11416 ttcagtaatcgtgacacga 11434  T

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Target: scaffold0270; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 307 - 424
Target Start/End: Original strand, 826 - 944
Alignment:
Q  307 tgccacatgtccctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgctccaaatcgtgaaac-gtt 405  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||| ||  ||    
T  826 tgccacatgttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaaccttatccaatattccaaatcgtgacacattt 925  T
Q  406 ttcaacaatcgtgacacga 424  Q
    ||||  |||||||||||||    
T  926 ttcagtaatcgtgacacga 944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 6331 - 6387
Alignment:
Q  318 cctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaa 374  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6331 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaa 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 89021 - 88965
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  89021 tgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactgactgtcatca 88965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 418 - 467
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgact 533  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  418 tgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgact 467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 540
Target Start/End: Complemental strand, 18519 - 18463
Alignment:
Q  484 tgaactcaaaatatcatgaaaatgacactaaaaataacaaatgactgactgccatca 540  Q
    |||||||||||||||||||||||||||||||||| |   |||||||||||| |||||    
T  18519 tgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgtcatca 18463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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