View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5862_low_7 (Length: 219)

Name: NF5862_low_7
Description: NF5862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5862_low_7
NF5862_low_7
[»] chr7 (40 HSPs)
chr7 (33-213)||(34546373-34546551)
chr7 (1-166)||(29993514-29993677)
chr7 (1-166)||(4628562-4628725)
chr7 (1-164)||(24798430-24798590)
chr7 (4-139)||(30810679-30810811)
chr7 (4-161)||(28587911-28588065)
chr7 (6-137)||(8754617-8754745)
chr7 (6-163)||(5239284-5239439)
chr7 (1-163)||(47839492-47839651)
chr7 (1-142)||(42044320-42044458)
chr7 (1-164)||(12218463-12218624)
chr7 (4-136)||(47083082-47083211)
chr7 (5-144)||(34606280-34606416)
chr7 (1-162)||(24438477-24438636)
chr7 (2-100)||(525103-525201)
chr7 (5-164)||(18485959-18486116)
chr7 (1-164)||(18117142-18117302)
chr7 (5-132)||(11686353-11686479)
chr7 (1-101)||(23363194-23363294)
chr7 (1-100)||(7689227-7689326)
chr7 (1-132)||(13064903-13065032)
chr7 (5-164)||(34333282-34333438)
chr7 (36-163)||(27456175-27456299)
chr7 (1-132)||(43594063-43594191)
chr7 (1-132)||(45045801-45045929)
chr7 (1-170)||(5729338-5729505)
chr7 (1-139)||(47657004-47657137)
chr7 (1-101)||(37674131-37674231)
chr7 (1-139)||(1737004-1737138)
chr7 (1-95)||(33636517-33636611)
chr7 (5-132)||(46716669-46716793)
chr7 (18-98)||(13556474-13556553)
chr7 (26-101)||(22739882-22739958)
chr7 (36-163)||(37631604-37631729)
chr7 (27-162)||(18469993-18470126)
chr7 (1-76)||(23357737-23357812)
chr7 (27-81)||(47118042-47118096)
chr7 (49-137)||(4100599-4100684)
chr7 (6-132)||(29835735-29835859)
chr7 (29-101)||(36437436-36437507)
[»] chr4 (53 HSPs)
chr4 (1-162)||(54897308-54897467)
chr4 (2-166)||(789558-789720)
chr4 (1-164)||(43944505-43944666)
chr4 (6-161)||(19503137-19503289)
chr4 (1-163)||(4268849-4269009)
chr4 (1-166)||(29591185-29591348)
chr4 (1-139)||(54655903-54656038)
chr4 (1-164)||(16536046-16536207)
chr4 (7-139)||(32202514-32202642)
chr4 (1-163)||(4089141-4089301)
chr4 (27-165)||(15186240-15186376)
chr4 (5-98)||(31680494-31680587)
chr4 (1-124)||(36395138-36395258)
chr4 (6-132)||(4220226-4220348)
chr4 (7-162)||(3783534-3783687)
chr4 (7-101)||(30387167-30387261)
chr4 (1-164)||(43202410-43202571)
chr4 (17-171)||(7768929-7769081)
chr4 (1-132)||(12356275-12356403)
chr4 (5-163)||(18067910-18068066)
chr4 (1-124)||(46148978-46149098)
chr4 (4-166)||(47231902-47232062)
chr4 (1-124)||(50619125-50619245)
chr4 (5-139)||(32217069-32217199)
chr4 (2-101)||(6164152-6164251)
chr4 (2-139)||(24679671-24679804)
chr4 (27-132)||(39843938-39844040)
chr4 (17-163)||(55882683-55882825)
chr4 (4-139)||(42898774-42898908)
chr4 (33-139)||(54054572-54054675)
chr4 (33-139)||(54945837-54945940)
chr4 (30-162)||(28755621-28755750)
chr4 (1-125)||(30154190-30154311)
chr4 (5-164)||(33108704-33108860)
chr4 (4-164)||(37987934-37988091)
chr4 (1-131)||(53655905-53656032)
chr4 (5-165)||(52533816-52533974)
chr4 (1-101)||(41265518-41265617)
chr4 (1-100)||(16820912-16821011)
chr4 (33-100)||(46688264-46688331)
chr4 (1-96)||(39877274-39877371)
chr4 (4-98)||(53268782-53268875)
chr4 (18-101)||(49915218-49915301)
chr4 (1-164)||(5091638-5091798)
chr4 (1-98)||(31517227-31517325)
chr4 (2-95)||(50603292-50603386)
chr4 (4-80)||(8133787-8133862)
chr4 (33-132)||(42815140-42815237)
chr4 (1-133)||(52697082-52697210)
chr4 (64-163)||(50167590-50167685)
chr4 (1-81)||(53003983-53004063)
chr4 (109-165)||(8133731-8133787)
chr4 (106-162)||(39877556-39877612)
[»] chr8 (46 HSPs)
chr8 (4-161)||(16888574-16888728)
chr8 (1-164)||(27988526-27988687)
chr8 (1-164)||(28045828-28045989)
chr8 (1-164)||(9063079-9063239)
chr8 (1-172)||(29444167-29444336)
chr8 (1-164)||(33357156-33357317)
chr8 (1-163)||(3930260-3930419)
chr8 (1-161)||(21595848-21596005)
chr8 (5-132)||(11112670-11112794)
chr8 (5-164)||(16785085-16785241)
chr8 (6-137)||(42035013-42035141)
chr8 (4-165)||(168463-168622)
chr8 (1-163)||(12203854-12204013)
chr8 (1-163)||(12448282-12448441)
chr8 (1-162)||(30675600-30675758)
chr8 (1-139)||(34228706-34228841)
chr8 (18-138)||(40831302-40831419)
chr8 (2-164)||(4648193-4648352)
chr8 (5-139)||(16890511-16890642)
chr8 (5-131)||(36730476-36730599)
chr8 (1-165)||(13643009-13643170)
chr8 (1-165)||(13743434-13743595)
chr8 (5-162)||(37373206-37373360)
chr8 (5-164)||(4537775-4537932)
chr8 (1-160)||(20831580-20831737)
chr8 (1-130)||(7304545-7304671)
chr8 (4-163)||(43119216-43119373)
chr8 (1-132)||(2805287-2805415)
chr8 (1-139)||(28626792-28626927)
chr8 (1-132)||(9537851-9537979)
chr8 (14-132)||(10870383-10870498)
chr8 (1-132)||(32113939-32114068)
chr8 (4-139)||(9253932-9254063)
chr8 (4-162)||(16394091-16394247)
chr8 (12-131)||(17467635-17467751)
chr8 (20-98)||(42433590-42433667)
chr8 (33-124)||(34192814-34192902)
chr8 (1-97)||(39406905-39407001)
chr8 (1-101)||(29235294-29235394)
chr8 (14-97)||(22451847-22451929)
chr8 (55-131)||(9278244-9278317)
chr8 (2-88)||(24843307-24843393)
chr8 (27-99)||(22956766-22956838)
chr8 (55-139)||(10618042-10618123)
chr8 (28-101)||(30933376-30933448)
chr8 (83-162)||(12652630-12652707)
[»] chr5 (26 HSPs)
chr5 (1-162)||(34650860-34651018)
chr5 (5-165)||(13661805-13661963)
chr5 (1-162)||(6283562-6283721)
chr5 (4-165)||(35132519-35132677)
chr5 (4-163)||(40564434-40564589)
chr5 (1-162)||(11957994-11958153)
chr5 (2-100)||(10956012-10956109)
chr5 (2-162)||(21547422-21547579)
chr5 (1-101)||(20175286-20175386)
chr5 (5-162)||(35504271-35504426)
chr5 (1-123)||(12506336-12506455)
chr5 (33-164)||(19647717-19647846)
chr5 (28-139)||(13470175-13470283)
chr5 (7-124)||(9721640-9721754)
chr5 (5-164)||(8787337-8787494)
chr5 (5-164)||(10054384-10054540)
chr5 (53-164)||(4837256-4837364)
chr5 (33-162)||(10069969-10070095)
chr5 (1-139)||(40057331-40057466)
chr5 (1-125)||(11846110-11846231)
chr5 (2-165)||(31909629-31909784)
chr5 (12-132)||(39066973-39067091)
chr5 (5-101)||(4268621-4268716)
chr5 (12-164)||(39069379-39069526)
chr5 (52-131)||(2619635-2619711)
chr5 (1-131)||(19436865-19436990)
[»] chr1 (51 HSPs)
chr1 (1-165)||(12072089-12072251)
chr1 (1-173)||(47009982-47010152)
chr1 (5-137)||(3784744-3784873)
chr1 (2-132)||(3097690-3097817)
chr1 (1-162)||(24178490-24178649)
chr1 (5-163)||(48071482-48071637)
chr1 (1-165)||(51065775-51065937)
chr1 (1-164)||(15227737-15227898)
chr1 (1-164)||(42770017-42770178)
chr1 (5-163)||(19031846-19032002)
chr1 (1-162)||(5694321-5694480)
chr1 (17-171)||(17333325-17333476)
chr1 (1-166)||(18043158-18043321)
chr1 (1-163)||(29657770-29657930)
chr1 (27-164)||(14350330-14350465)
chr1 (1-163)||(45431278-45431437)
chr1 (1-138)||(9266755-9266889)
chr1 (2-130)||(6770370-6770495)
chr1 (1-139)||(41730329-41730467)
chr1 (1-163)||(13961211-13961370)
chr1 (5-132)||(30294412-30294536)
chr1 (5-144)||(38162869-38163005)
chr1 (1-101)||(36446352-36446452)
chr1 (1-164)||(29683193-29683355)
chr1 (12-132)||(38335200-38335317)
chr1 (33-163)||(29210412-29210540)
chr1 (27-160)||(38701986-38702117)
chr1 (1-165)||(51368812-51368974)
chr1 (1-99)||(12306978-12307076)
chr1 (27-130)||(35985674-35985774)
chr1 (1-101)||(50128199-50128299)
chr1 (1-164)||(43286720-43286881)
chr1 (44-166)||(30657604-30657724)
chr1 (1-132)||(45449271-45449399)
chr1 (6-161)||(30217763-30217916)
chr1 (1-132)||(8472941-8473069)
chr1 (4-131)||(47532701-47532824)
chr1 (20-101)||(52431640-52431720)
chr1 (4-159)||(48383141-48383294)
chr1 (5-164)||(52749600-52749757)
chr1 (5-132)||(23473495-23473619)
chr1 (51-165)||(15282591-15282702)
chr1 (1-65)||(19010714-19010778)
chr1 (26-101)||(37315320-37315394)
chr1 (37-130)||(39497340-39497430)
chr1 (20-98)||(3838824-3838901)
chr1 (31-81)||(14881036-14881086)
chr1 (27-101)||(37503273-37503346)
chr1 (53-101)||(26228252-26228300)
chr1 (64-101)||(19011057-19011094)
chr1 (86-161)||(19011108-19011180)
[»] chr6 (35 HSPs)
chr6 (2-160)||(2350654-2350810)
chr6 (17-166)||(18276658-18276804)
chr6 (1-164)||(1391205-1391365)
chr6 (1-162)||(392096-392255)
chr6 (1-139)||(26467151-26467286)
chr6 (5-165)||(3515763-3515921)
chr6 (1-131)||(12145144-12145271)
chr6 (5-163)||(29451146-29451301)
chr6 (1-131)||(34851876-34852003)
chr6 (1-165)||(32929535-32929697)
chr6 (4-132)||(2580983-2581108)
chr6 (1-164)||(4215693-4215854)
chr6 (5-164)||(23402136-23402293)
chr6 (6-164)||(7851191-7851347)
chr6 (27-162)||(21878400-21878533)
chr6 (3-162)||(29978233-29978389)
chr6 (1-132)||(32985220-32985348)
chr6 (17-162)||(23629619-23629761)
chr6 (33-164)||(20897946-20898075)
chr6 (5-163)||(27433491-27433647)
chr6 (1-132)||(35043921-35044048)
chr6 (1-165)||(12525716-12525878)
chr6 (33-142)||(34477609-34477715)
chr6 (1-165)||(3026036-3026196)
chr6 (4-132)||(25165443-25165568)
chr6 (49-164)||(34396602-34396715)
chr6 (1-131)||(13416986-13417116)
chr6 (17-132)||(28225252-28225363)
chr6 (1-138)||(11115124-11115256)
chr6 (5-121)||(961051-961164)
chr6 (1-142)||(1840274-1840412)
chr6 (12-124)||(5323439-5323548)
chr6 (27-163)||(31280320-31280454)
chr6 (2-138)||(9661011-9661144)
chr6 (61-139)||(13529479-13529554)
[»] chr2 (40 HSPs)
chr2 (1-131)||(26387091-26387218)
chr2 (1-162)||(31438646-31438805)
chr2 (1-164)||(34442559-34442719)
chr2 (1-163)||(22887749-22887909)
chr2 (1-159)||(3668140-3668295)
chr2 (1-139)||(20552955-20553090)
chr2 (1-162)||(44587902-44588061)
chr2 (2-166)||(561546-561708)
chr2 (1-164)||(27856423-27856584)
chr2 (1-164)||(30486208-30486369)
chr2 (1-159)||(4381798-4381954)
chr2 (19-162)||(43637165-43637305)
chr2 (1-131)||(5093566-5093693)
chr2 (5-164)||(31390010-31390167)
chr2 (5-132)||(22567633-22567757)
chr2 (1-101)||(1859221-1859321)
chr2 (1-139)||(6580213-6580348)
chr2 (1-139)||(32860126-32860260)
chr2 (1-142)||(8969434-8969572)
chr2 (1-98)||(25782860-25782957)
chr2 (1-101)||(4022506-4022606)
chr2 (1-139)||(22068347-22068481)
chr2 (4-164)||(38590904-38591062)
chr2 (1-132)||(2898102-2898230)
chr2 (4-139)||(35851781-35851913)
chr2 (20-139)||(38296201-38296317)
chr2 (5-95)||(13574060-13574150)
chr2 (27-139)||(27584762-27584871)
chr2 (4-163)||(32360899-32361056)
chr2 (33-163)||(26891722-26891850)
chr2 (12-130)||(11021260-11021375)
chr2 (7-137)||(5881243-5881374)
chr2 (1-139)||(28600991-28601125)
chr2 (4-96)||(29102313-29102405)
chr2 (26-101)||(15079011-15079085)
chr2 (17-124)||(25772149-25772254)
chr2 (6-98)||(34123057-34123148)
chr2 (1-101)||(39531883-39531981)
chr2 (2-98)||(15146694-15146789)
chr2 (20-98)||(10820546-10820622)
[»] chr3 (45 HSPs)
chr3 (1-139)||(49529293-49529431)
chr3 (1-139)||(42964276-42964411)
chr3 (7-163)||(272219-272373)
chr3 (1-165)||(52520678-52520840)
chr3 (1-163)||(49893330-49893490)
chr3 (5-131)||(858621-858744)
chr3 (1-162)||(43786871-43787030)
chr3 (5-166)||(46352630-46352789)
chr3 (1-139)||(48725295-48725430)
chr3 (1-162)||(2505350-2505508)
chr3 (5-162)||(10617315-10617469)
chr3 (1-137)||(41553967-41554100)
chr3 (5-162)||(4168183-4168338)
chr3 (1-162)||(39074419-39074577)
chr3 (5-131)||(38852246-38852372)
chr3 (1-164)||(40362607-40362768)
chr3 (4-163)||(41304004-41304159)
chr3 (1-130)||(42548128-42548254)
chr3 (27-138)||(2119456-2119563)
chr3 (1-98)||(6842681-6842778)
chr3 (1-167)||(18014667-18014831)
chr3 (6-132)||(2938072-2938195)
chr3 (1-162)||(20923992-20924151)
chr3 (2-101)||(33140944-33141043)
chr3 (2-100)||(50395591-50395688)
chr3 (1-144)||(52246601-52246742)
chr3 (18-141)||(22248908-22249028)
chr3 (4-139)||(53489854-53489986)
chr3 (2-131)||(13159929-13160055)
chr3 (17-132)||(28139340-28139452)
chr3 (1-101)||(50359213-50359313)
chr3 (2-101)||(50298973-50299072)
chr3 (28-132)||(7468442-7468543)
chr3 (27-139)||(29241661-29241770)
chr3 (1-137)||(43269766-43269899)
chr3 (4-164)||(11308241-11308398)
chr3 (18-101)||(31514850-31514932)
chr3 (6-101)||(41993652-41993746)
chr3 (12-98)||(24488428-24488514)
chr3 (1-81)||(52552553-52552632)
chr3 (33-98)||(2362893-2362958)
chr3 (75-164)||(52718166-52718252)
chr3 (51-130)||(53054834-53054913)
chr3 (61-99)||(6842604-6842642)
chr3 (106-162)||(2362801-2362858)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-164)||(22959-23120)
[»] scaffold0524 (1 HSPs)
scaffold0524 (1-131)||(857-984)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-162)||(14896-15055)
[»] scaffold0021 (1 HSPs)
scaffold0021 (5-164)||(116202-116359)
[»] scaffold1266 (1 HSPs)
scaffold1266 (2-163)||(292-450)
[»] scaffold0425 (1 HSPs)
scaffold0425 (1-99)||(10771-10869)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-137)||(40945-41078)
[»] scaffold1152 (1 HSPs)
scaffold1152 (6-137)||(704-832)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-144)||(50567-50707)
scaffold0045 (44-153)||(53416-53522)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-163)||(53716-53872)
[»] scaffold0188 (1 HSPs)
scaffold0188 (5-139)||(6141-6272)
[»] scaffold0674 (1 HSPs)
scaffold0674 (33-142)||(7956-8062)
[»] scaffold0549 (1 HSPs)
scaffold0549 (33-142)||(7309-7415)
[»] scaffold0038 (1 HSPs)
scaffold0038 (17-132)||(25750-25861)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-131)||(146933-147059)
[»] scaffold0014 (1 HSPs)
scaffold0014 (2-164)||(68318-68478)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1-95)||(19612-19706)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-141)||(69248-69384)
[»] scaffold0325 (1 HSPs)
scaffold0325 (5-166)||(17502-17658)
[»] scaffold0206 (1 HSPs)
scaffold0206 (33-163)||(11029-11155)
[»] scaffold0034 (1 HSPs)
scaffold0034 (5-164)||(95616-95772)
[»] scaffold0007 (1 HSPs)
scaffold0007 (5-95)||(233918-234008)
[»] scaffold0015 (1 HSPs)
scaffold0015 (27-95)||(74526-74594)


Alignment Details
Target: chr7 (Bit Score: 124; Significance: 6e-64; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 34546373 - 34546551
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||||||||||    |||||||||||||||||||| ||||||    
T  34546373 taccataaaagtaaactgtttttgactttactataaattaattacacaatttcaatgcattaactactat---ataatttcctttttcatatccttaacc 34546469  T
Q  133 ggtgcc-cgggagaatcggttagcatttcccttttgaaaataacctgaaataatttctcatgattaccatgatcaatctttc 213  Q
    ||| || |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34546470 ggtacctcgggggcatcggttagcatttcccttttgaaaataacctgaaataatttctcatgattaccatgatcaatctttc 34546551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 29993514 - 29993677
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  29993514 cactggttaagcataccataaaagggaattattaccataaaaggaaattgattttgactttattataaattaattacacaatttcaatgcattaactact 29993613  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 166  Q
    |    |||||||||||||||||||| |||||||||| |||||| | | | |||||||||||||||||    
T  29993614 a---tataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttccctttt 29993677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4628725 - 4628562
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||| ||||||| ||||||||||    
T  4628725 cactggttaagcataccataaaagggaattattaccataaaagtaaactgtttctgactttattataaattaattaaacaatttcaatgtattaactact 4628626  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 166  Q
    |    |||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||||    
T  4628625 a---tataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttccctttt 4628562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24798430 - 24798590
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||  |||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  24798430 cactggttaagcatactataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 24798529  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| | |||  ||||||||| | | |||||||||||||||||    
T  24798530 a---tataatttcctttttcatatcctcaacaagtgcccgggggcaccggttagcatttccctt 24798590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 30810811 - 30810679
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||      
T  30810811 tggttaaacataccataaaagaaaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta-- 30810714  T
Q  104 ccataatttcctttttcatatcattaaccggtgccc 139  Q
      |||||||||||||||||||| |||||| ||||||    
T  30810713 -tataatttcctttttcatatccttaaccagtgccc 30810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 28588065 - 28587911
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| |||| |||||||      
T  28588065 tggttaaacataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattgactacta-- 28587968  T
Q  104 ccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 161  Q
      |||||||||||||||||||| |||||| ||| ||||| | | ||||||||||||||    
T  28587967 -tataatttcctttttcatatccttaaccagtgtccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 8754617 - 8754745
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| |||||||| |||||||||||||||||  ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||        
T  8754617 gttaagcataccataaaaggaaattattaccataaaacaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta---t 8754713  T
Q  106 ataatttcctttttcatatcattaaccggtgc 137  Q
    |||||||| ||||||||||| |||||| ||||    
T  8754714 ataatttcatttttcatatccttaaccagtgc 8754745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 5239439 - 5239284
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| ||||||||  ||||||||||||||||  ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||        
T  5239439 gttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta---t 5239343  T
Q  106 ataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccct 163  Q
    |||||||||||||||||| |||||||| |||| ||||  | | ||||||||||||||||    
T  5239342 ataatttcctttttcataccattaaccagtgctccggaggcaccggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 47839651 - 47839492
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||| ||||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||| |||||||| |    
T  47839651 cactggttattcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaactatt 47839552  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
    |    |||| ||||||||||||||| |||||| || ||| ||   | ||||||||||||||||    
T  47839551 a---tataaattcctttttcatatccttaaccagtaccccgggacaccggttagcatttccct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 42044320 - 42044458
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||  ||||||||||    
T  42044320 cactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgacattattataaattaattacacaatttcaatctattaactact 42044419  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggg 142  Q
    |    |||||||| ||||||||| | ||||||||||||||||    
T  42044420 a---tataatttcttttttcatacctttaaccggtgcccggg 42044458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 12218463 - 12218624
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| | ||||| | |||||||||||| |||||||||| ||||||||||||||||||    
T  12218463 cactggttaaacataccataaaagagaattattaccataaaaggaaactattttttattttattataaattaattacacaatttcaatgcattaactact 12218562  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||  ||| || ||| |||||| | | |||||||||||||||||    
T  12218563 a---tataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttccctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 47083211 - 47083082
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||||||||||||  ||||||||||||||||| ||| ||||||| |||||||||| ||| |||||||||| |||||| ||||||||||||      
T  47083211 tggttaaacatatcataaaagggaattattaccataaaaggaaactgtttttaactttattatcaattaattacacaatttcaatacattaactacta-- 47083114  T
Q  104 ccataatttcctttttcatatcattaaccggtg 136  Q
      |||||||| ||||||||||| ||||||||||    
T  47083113 -tataatttcttttttcatatccttaaccggtg 47083082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 34606416 - 34606280
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| || ||||||||||||||||||| |||| ||||| ||||||||||||| |||||       
T  34606416 ggttaagcataccataaaaggtaattattaccataaaaggaaactgcttttgactttattataaattaatttcacaatttcaatgcattaattacta--- 34606320  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggag 144  Q
     |||||||||||||||||||| |||||| |||||| ||||    
T  34606319 tataatttcctttttcatatccttaaccagtgccccggag 34606280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 24438636 - 24438477
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| ||||||| || ||||||||||||||||||    
T  24438636 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacataatttcaatgcattaactact 24438537  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    ||| |||||||||||||| | |||||  ||| |||||| | | |||||||||||||||    
T  24438536 a---tatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 525103 - 525201
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||| |||||||||||||  ||||||||||||||||| ||| ||||||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  525103 actggttaaacatatcataaaagagaattattaccataaaaggaaactgtttttgattttattataaattaattatacaatttcaatgcattaactact 525201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 18486116 - 18485959
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||  |||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||| |||||| |||||| |||||       
T  18486116 ggttaagcataccataaaatgaaattattaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatacattaattacta--- 18486020  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
     |||||||||||||  ||||| |||||| ||| |||||| | | |||||||||||||||||    
T  18486019 tataatttccttttcaatatccttaaccagtgccccgggggcaccggttagcatttccctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18117302 - 18117142
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||  |||||||||| ||||||  ||| |||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  18117302 cactggttaagcataccataaaatgaaattattactataaaaaaaaactgtttttgactttattataaattaattacacaatttcaatacattaactact 18117203  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||| ||||||||  |||||   || || |||| |||||||||||||| ||||    
T  18117202 a---tataatttcctctttcatatacttaacaaatgtcccggagcatcggttagcattttcctt 18117142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 11686353 - 11686479
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaat--tgtttttgactttattataaatgaattacacaagttcaatgcattaactactac 102  Q
    |||||| |||||||||||||  ||||||||||||||||  |||   |||||||||||||||||||||| |||||||||| |||||||||||||||||||     
T  11686353 ggttaagcatatcataaaagagaattattaccataaaaaaaaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta- 11686451  T
Q  103 tccataatttcctttttcatatcattaacc 132  Q
       |||||||||||||| ||||| ||||||    
T  11686452 --tataatttccttttttatatccttaacc 11686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23363194 - 23363294
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  || |||||||||||||| ||| ||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  23363194 cactggttaaacataccataaaagagaaatattaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatgcattaactact 23363293  T
Q  101 a 101  Q
    |    
T  23363294 a 23363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7689227 - 7689326
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||||  ||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  7689227 cactggttaagtataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattact 7689326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 13064903 - 13065032
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttt-tgactttattataaatgaattacacaagttcaatgcattaactac 99  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||| |||||||||||||||| |||||||||| |||||| |||||| ||     
T  13064903 cactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttgactttattataaattaattacacaaattcaatacattaaatat 13065002  T
Q  100 tactccataatttcctttttcatatcattaacc 132  Q
    ||    |||||||||||||||||||| ||||||    
T  13065003 ta---tataatttcctttttcatatccttaacc 13065032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 34333438 - 34333282
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||   ||||||||||||||||| ||| |||||| ||| ||||||||||| |||||||||| ||||||||||||| |||||       
T  34333438 ggttaaacataccataaaaaggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaattacta--- 34333343  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
     |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||||    
T  34333342 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 34333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 27456175 - 27456299
Alignment:
Q  36 cataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggt 135  Q
    |||||||| ||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||    |||||||| |||| |||||| |||||| ||    
T  27456175 cataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactacta---tataatttctttttccatatccttaaccagt 27456271  T
Q  136 gcccgggagaatcggttagcatttccct 163  Q
    ||||||| | | | ||||||||||||||    
T  27456272 gcccgggggcaccagttagcatttccct 27456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 43594063 - 43594191
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||| ||||| || ||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| |    
T  43594063 cactggttaagcataccataaaagagaattattatcataagaggaaactgtttttgactttattataaattaattatacaatttcaatgcattaactatt 43594162  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    |||||||||||||| ||||| ||||||    
T  43594163 a---tataatttccttttttatatccttaacc 43594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 45045929 - 45045801
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||    
T  45045929 cactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaattact 45045830  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    |||||||| ||||||||| | ||||||    
T  45045829 a---tataatttcatttttcatacccttaacc 45045801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 5729505 - 5729338
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||  ||||||||  ||||||||| ||||||| ||||| |||||||||||||||| ||| |||||||  | |||||| ||||||||| |    
T  5729505 cactggttaagcatgccataaaagagaattattactataaaagaaaattatttttgactttattatcaattaattacattatttcaatacattaactatt 5729406  T
Q  101 actccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttcccttttgaaa 170  Q
    |    |||||||||||||||||||| |||||| |||| ||||||  | |||||| |||||||||| |||||    
T  5729405 a---tataatttcctttttcatatccttaaccagtgctccgggaacaccggttaacatttcccttatgaaa 5729338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 47657137 - 47657004
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||| |||| |||| ||||||||  ||||||||||||||||  ||| || |||| |||||||||||||| |||||||||| ||||||||||||| ||||    
T  47657137 cactgattaagcataccataaaagggaattattaccataaaa--aaactgcttttaactttattataaattaattacacaatttcaatgcattaattact 47657040  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    ||||||| |||||||||||| |||||| ||||||    
T  47657039 a---tataattttctttttcatatccttaaccagtgccc 47657004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 37674131 - 37674231
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||  ||| |  || |||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  37674131 cactggttaagcataccataaaaaaaaaattatatcataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 37674230  T
Q  101 a 101  Q
    |    
T  37674231 a 37674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 1737138 - 1737004
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||| | |||||||| |||||| | ||| ||||||| |||||||||| ||| |||||||| | |||||||||||||||| |    
T  1737138 cactggttaagcataccataaaa-tgaattattatcataaatggaaaatgtttttaactttattatcaattaattacactatttcaatgcattaactatt 1737040  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||| ||||||||||| |||||| ||||||    
T  1737039 a---tataatttcatttttcatatccttaaccagtgccc 1737004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33636611 - 33636517
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaa 95  Q
    |||||||||| |||| |||||||   |||||||||||||||| |||| | ||||| |||||||||||||| |||||||||| ||||||| |||||    
T  33636611 cactggttaagcataccataaaatagaattattaccataaaaataaactattttttactttattataaattaattacacaatttcaatgaattaa 33636517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 46716793 - 46716669
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  |||||||| |||||||| ||| | |||||||||||||||||||| ||||||| || |||| |||||||| || ||       
T  46716793 ggttaaacataccataaaagggaattattatcataaaaggaaaatatttttgactttattataaattaattacataatttcagtgcattaagtatta--- 46716697  T
Q  105 cataatttcctttttcatatcattaacc 132  Q
     |||||||||||||| ||||| ||||||    
T  46716696 tataatttccttttttatatctttaacc 46716669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 13556553 - 13556474
Alignment:
Q  18 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    ||||||| |||||||||||||||||  | |||||| |||||||| |||||||| |||||||||| ||||||||||| ||||    
T  13556553 ataaaaggaaattattaccataaaaagatattgttattgacttt-ttataaattaattacacaatttcaatgcattgacta 13556474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 22739958 - 22739882
Alignment:
Q  26 aaattattaccataaaagtaaattgtttttgactttatt-ataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||||||||||||||||| ||| ||||||| | ||| || |||||| |||||||||| |||||||||||||||||||    
T  22739958 aaattattaccataaaagaaaactgtttttaattttttttataaattaattacacaatttcaatgcattaactacta 22739882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 37631604 - 37631729
Alignment:
Q  36 cataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggt 135  Q
    |||||||| ||| ||||||||| |||||||||||| ||||||| || || |||||||||| || ||    |||||||||||||| ||||| |||||| ||    
T  37631604 cataaaaggaaactgtttttgattttattataaattaattacataattttaatgcattaattatta---tataatttccttttttatatccttaacccgt 37631700  T
Q  136 g-cccgggagaatcggttagcatttccct 163  Q
    | ||||| || | |||||| |||||||||    
T  37631701 gccccggaagcaccggttaacatttccct 37631729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 18469993 - 18470126
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||||||||||   || ||||||||||||| | |||||| |||||||||| ||||||| ||||||| |||    ||||||||||||||  |||      
T  18469993 aattattaccataaaatgtaactgtttttgacttt-tcataaattaattacacaatttcaatgtattaactgcta---tataatttcctttttagtatgc 18470088  T
Q  127 ttaaccggtg--cccgggagaatcggttagcatttccc 162  Q
    ||||||||||  |||||| | | |||||||||||||||    
T  18470089 ttaaccggtgcccccgggggcaccggttagcatttccc 18470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23357737 - 23357812
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaatta 76  Q
    |||||||||| ||||||||| |||  |||||||| |||||| | ||| ||||||||||||| |||||||| |||||    
T  23357737 cactggttaagcatatcatagaagagaattattatcataaatggaaactgtttttgacttttttataaattaatta 23357812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 47118042 - 47118096
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaa 81  Q
    ||||||||||||||||| ||| || | ||||||||||||||||| ||||||||||    
T  47118042 aattattaccataaaaggaaactgctcttgactttattataaattaattacacaa 47118096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 4100599 - 4100684
Alignment:
Q  49 tgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgc 137  Q
    ||||||||| || ||||||||| ||| ||| || || ||| |||||| |||||    |||||||||||||||||||| |||||||||||    
T  4100599 tgtttttgatttgattataaattaataacataattttaatacattaattactat---ataatttcctttttcatatccttaaccggtgc 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 29835735 - 29835859
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaat-tgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    ||||| |||| |||||||   ||||||||||||||||  |||  ||||||| ||||||||| |||| |||||| ||| || ||| ||||||||| ||       
T  29835735 gttaagcataccataaaatagaattattaccataaaaaaaaaactgtttttaactttattacaaattaattacgcaattttaatacattaactagtat-- 29835832  T
Q  105 cataatttcctttttcatatcattaacc 132  Q
     |||| ||||||||||||||| ||||||    
T  29835833 -ataacttcctttttcatatctttaacc 29835859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 36437507 - 36437436
Alignment:
Q  29 ttattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||||| |||||||| ||| | ||||||||||| |||||||| ||||| |||| ||||||| |||| ||||||    
T  36437507 ttattatcataaaagaaaactatttttgacttt-ttataaattaattaaacaatttcaatgaattacctacta 36437436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 54897467 - 54897308
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  54897467 cactggttaaacataccataaaaggaaattattaccataaaaggaaattgtttttgactttattataaattaattatacaatttcaatgcattaactact 54897368  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||| ||||||| |||||| ||| |||||| | | |||||||||||||||    
T  54897367 a---tataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 789558 - 789720
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||    
T  789558 actggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta 789657  T
Q  102 ctccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 166  Q
        |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||||||    
T  789658 ---tataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttccctttt 789720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43944666 - 43944505
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||| |||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  43944666 cactggttaagcataccatacaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 43944567  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||| | |||||| |||||| ||| | | |||||||||||||||||    
T  43944566 a---tataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 19503137 - 19503289
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| ||||||||  ||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||| ||||||| |||||||| ||        
T  19503137 gttaagcataccataaaagggaattattacaataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaactagta---t 19503233  T
Q  106 ataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 161  Q
    |||||||||||||||||||| |||||| || |||||||| | ||||||||||||||    
T  19503234 ataatttcctttttcatatccttaaccagtacccgggagcaccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4268849 - 4269009
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||||||||| ||||||||  ||||||||||||||||  ||| |||||||||| ||||||||||| ||||||| || ||||||||||||||||||    
T  4268849 cactggttaatcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacataatttcaatgcattaactact 4268948  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
    |    ||| |||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||    
T  4268949 a---tatagtttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 29591348 - 29591185
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  29591348 cactagttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaagtacacaatttcaatgcattaactact 29591249  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 166  Q
    |    ||||||||||| |||||||  |||||| ||| |||||| | | | |||||||||||||||||    
T  29591248 a---tataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttccctttt 29591185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 54655903 - 54656038
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||||||||| ||  |||||||| | |||||| |||||||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  54655903 cactggttaagcatatcataagagagaattattatcctaaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactact 54656002  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||||||||| ||||| |||||| ||||||    
T  54656003 a---tataatttccttttttatatccttaaccagtgccc 54656038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 16536207 - 16536046
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||||  ||| |||||||   ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  16536207 cactggttaagaataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 16536108  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||| | |||| | ||| |||||| | | |||||||||||||||||    
T  16536107 a---tataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttccctt 16536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 32202514 - 32202642
Alignment:
Q  7 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcca 106  Q
    |||| ||||||||||||| || |||||| |||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    |    
T  32202514 ttaagcatatcataaaaggaa-ttattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta---ta 32202609  T
Q  107 taatttcctttttcatatcattaaccggtgccc 139  Q
    ||||||||||||| ||||| |||||| ||||||    
T  32202610 taatttccttttttatatccttaacccgtgccc 32202642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4089301 - 4089141
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  4089301 cactggttaaacataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 4089202  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
    |    ||||||| |||||||||| | |||| | ||| ||| || | | ||||||||||||||||    
T  4089201 a---tataattttctttttcatacccttaatcagtgccccaggggcaccggttagcatttccct 4089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 15186376 - 15186240
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||| |||||||||||    |||||||||||||||||| |     
T  15186376 aattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatggattaactacta---tataatttcctttttcataccc 15186280  T
Q  127 ttaaccggtg-cccgggagaatcggttagcatttcccttt 165  Q
    |||||| ||| |||||| | | ||||||||||||||||||    
T  15186279 ttaaccagtgccccgggggcaccggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 31680494 - 31680587
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    |||||| |||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  31680494 ggttaaacatatcataaaaatgaattattaccataaaaggaaattgtttttgactttattataaattaattatacaatttcaatgcattaacta 31680587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 36395258 - 36395138
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| || ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  36395258 cactggttaagcataccataaaagggaattattatcataaaagaaaactgcttttgactttattataaattaattacacaatttcaatgcattaactact 36395159  T
Q  101 actccataatttcctttttcatat 124  Q
    |    |||||||||||||||||||    
T  36395158 a---tataatttcctttttcatat 36395138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 4220348 - 4220226
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| ||||||||  ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||        
T  4220348 gttaagcataccataaaagggaattattac-ataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactacta---t 4220253  T
Q  106 ataatttcctttttcatatcattaacc 132  Q
    |||||||||||||||||||| ||||||    
T  4220252 ataatttcctttttcatatccttaacc 4220226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 3783534 - 3783687
Alignment:
Q  7 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcca 106  Q
    |||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| ||||| |||| || ||||||||||||||||    |    
T  3783534 ttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattaaacaattttaatgcattaactacta---ta 3783630  T
Q  107 taatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 162  Q
    ||||||| ||||||||||  ||||||||||||| ||| | | |||||||||||||||    
T  3783631 taatttcatttttcatatgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 30387167 - 30387261
Alignment:
Q  7 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| ||||||||||||   ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  30387167 ttaagcatatcataaaaaggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta 30387261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 43202410 - 43202571
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| | || ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| || |||||||||| ||||    
T  43202410 cactggttaagcttaccataaaagagaattattaccataaaagaaaactgtttttgacattattataaattaattacacaattttaatgcattaattact 43202509  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||| | |||||  ||| |||||| | | |||||||||||||||||    
T  43202510 a---tataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 7769081 - 7768929
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    ||||||||  ||||||||||||||||| ||| ||||||| || ||||||||||| |||||||||| |||||| ||||||||||||    |||||||||||    
T  7769081 cataaaagagaattattaccataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactacta---tataatttcctt 7768985  T
Q  117 tttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttttgaaaa 171  Q
    ||||||| | |||||| ||| |||||| | | || |||||||||||||||| ||||    
T  7768984 tttcatacccttaaccagtgccccgggggtaccgattagcatttcccttttaaaaa 7768929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 12356403 - 12356275
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||| ||||| | || ||||||| ||||||||||    
T  12356403 cactggttaagcataccataaaagagaattattatcataaaaggaaactgtttttgactttattataaattaattatataatttcaatgtattaactact 12356304  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    |||||||||||||||||||| ||||||    
T  12356303 a---tataatttcctttttcatatccttaacc 12356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 18067910 - 18068066
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||| |||| |||||| |||||||||| || ||||||||||||||||       
T  18067910 ggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactacta--- 18068006  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
     |||||||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||    
T  18068007 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 46149098 - 46148978
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||| ||||| || |    
T  46149098 cactggttaaacataccataaaagagaattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgtattaattatt 46148999  T
Q  101 actccataatttcctttttcatat 124  Q
    |    |||||||||||||||||||    
T  46148998 a---tataatttcctttttcatat 46148978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 47231902 - 47232062
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||| ||| |||||||  | |||||||||||||||| ||      
T  47231902 tggttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattatcaattaattacattatttcaatgcattaactatta-- 47231999  T
Q  104 ccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctttt 166  Q
      |||||||||||||||| ||| |||||| |||| ||||| | | |||||||||||||||||||    
T  47232000 -tataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttccctttt 47232062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 50619245 - 50619125
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| ||||||| |||||||||||||| || ||||||| ||||||||||||||||||    
T  50619245 cactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaagtacacaatttcaatgcattaactact 50619146  T
Q  101 actccataatttcctttttcatat 124  Q
    |    ||||||| |||||||||||    
T  50619145 a---tataattttctttttcatat 50619125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 32217199 - 32217069
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  |||||||| |||||||  ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||       
T  32217199 ggttaagcataccataaaagggaattattatcataaaaa-aaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta--- 32217104  T
Q  105 cataatttcctttttcatatcattaaccggtgccc 139  Q
     |||||||||||||| ||||| |||||| ||||||    
T  32217103 tataatttccttttttatatccttaaccagtgccc 32217069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 6164251 - 6164152
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||  ||||||||||||| |||||||||| |||||||||||||||||||    
T  6164251 actggttaagcataccataaaagagaattattaccataaaaggaaactgttttttgctttattataaattaattacacaatttcaatgcattaactacta 6164152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 24679671 - 24679804
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| |||| |||| ||||||||  ||||||||||||||| | ||||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||    
T  24679671 actgattaagcataccataaaagagaattattaccataaagg-aaattgtttttaactttattataaattaattacacaatttcaatacattaactacta 24679769  T
Q  102 ctccataatttcctttttcatatcattaaccggtgccc 139  Q
        |||||||| ||||||||||| |||||| ||||||    
T  24679770 ---tataatttcttttttcatatccttaaccagtgccc 24679804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 39844040 - 39843938
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||    |||||||| |||||||||||     
T  39844040 aattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatgcattaactacta---tataatttcatttttcatatcc 39843944  T
Q  127 ttaacc 132  Q
    ||||||    
T  39843943 ttaacc 39843938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 55882825 - 55882683
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    ||||||||| |||| |||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||||    |||||||  ||    
T  55882825 cataaaagtgaatt-ttaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattacta---tataattt-ttt 55882731  T
Q  117 tttcatatcattaaccggtgcccgggaga-atcggttagcatttccct 163  Q
    ||||||||| |||||  |||||| ||||| | ||||||||||||||||    
T  55882730 tttcatatccttaacgagtgccccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 42898774 - 42898908
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattacca--taaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||| |||| ||||||||  |||||||||||  |||||  ||| | |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  42898774 tggttaagcataccataaaagagaattattaccacataaaaagaaactatttttgactttattataaattaattacacaatttcaatgcattaactacta 42898873  T
Q  102 ctccataatttcctttttcatatcattaaccggtgccc 139  Q
        |||||||||||||| ||||| |||||| ||||||    
T  42898874 ---tataatttccttttttatatccttaaccagtgccc 42898908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 54054675 - 54054572
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||| | |||||||||||||||| ||    |||||||| ||||||||||| ||||||    
T  54054675 taccataaaaggaaattgtttttgactttattatcaattaattacactatttcaatgcattaactatta---tataatttcttttttcatatccttaacc 54054579  T
Q  133 ggtgccc 139  Q
    |||||||    
T  54054578 ggtgccc 54054572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 54945837 - 54945940
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||  |||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||    |||||||||||||||||||| ||||||    
T  54945837 taccataaaacgaaattgtttttgactttattataaattaattacacaatttcaatacattaactgcta---tataatttcctttttcatatccttaacc 54945933  T
Q  133 ggtgccc 139  Q
     ||||||    
T  54945934 agtgccc 54945940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 28755750 - 28755621
Alignment:
Q  30 tattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcatta 129  Q
    ||||| |||||||| ||| ||||| | |||||||||| ||| |||||||||| |||||||||||||||||||    |||||||||||||||||||| |||    
T  28755750 tattatcataaaaggaaactgtttctaactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatcctta 28755654  T
Q  130 accggtgcccgggagaatcggttagcatttccc 162  Q
    ||| |||||| ||   | |||||||||||||||    
T  28755653 accagtgccctgggacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 30154190 - 30154311
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| || | ||||||||  |||||||| |||| ||| ||||||||||||| |||||||||||| ||||||| || |||||| |||||||||||    
T  30154190 cactggttaagcacaccataaaagagaattattatcatataaggaaattgtttttgattttattataaattaattacataatttcaatacattaactact 30154289  T
Q  101 actccataatttcctttttcatatc 125  Q
    |    ||||||||||||||||||||    
T  30154290 a---tataatttcctttttcatatc 30154311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 33108704 - 33108860
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||   ||||||||||||||||| ||| |||||||||||||||||| ||| ||||| || | |||||||||||||||| ||       
T  33108704 ggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattatactatttcaatgcattaactatta--- 33108800  T
Q  105 cataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 164  Q
     |||||||||||||||||||| |||||| |||||| ||| | | |||||| ||||||||||    
T  33108801 tataatttcctttttcatatc-ttaaccagtgccccggaggcaccggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 37988091 - 37987934
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| ||||  |||||||  ||||||||| ||||||| ||| ||||||| || ||||||||||| |||||||||| |||||| ||||||||||||      
T  37988091 tggttaagcatactataaaagagaattattacaataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactacta-- 37987994  T
Q  104 ccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 164  Q
      |||||||||||||||||| | ||||||  | ||| |||| | |||||| ||||||||||    
T  37987993 -tataatttcctttttcatacccttaaccattaccctggagcaccggttaacatttccctt 37987934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 53655905 - 53656032
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||| |||| |||| |||||||  |||||||||||||||||  ||||| ||||| |||||||||||||| |||||||||| |||||| ||||||||| |    
T  53655905 cactgattaagcataccataaaatgaaattattaccataaaataaaattatttttaactttattataaattaattacacaatttcaatacattaactatt 53656004  T
Q  101 actccataatttcctttttcatatcattaac 131  Q
    |    |||||||| ||||||||||| |||||    
T  53656005 a---tataatttcttttttcatatccttaac 53656032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 52533816 - 52533974
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||| ||||||||||| ||| |||||  ||| |||| ||||||||||||||       
T  52533816 ggttaaacataccataaaagggaattattaccataaaaggaaactgttttcgactttattatcaattaattattcaatttcagtgcattaactacta--- 52533912  T
Q  105 cataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttcccttt 165  Q
     |||||||||||||||||||  |||||| ||| || ||| | | |||||| |||||||||||    
T  52533913 tataatttcctttttcatattcttaaccagtgtcctggaggcaccggttaacatttcccttt 52533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41265617 - 41265518
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| || ||||| |||||||||| ||||||| ||| ||||||||| ||| |||||||| |||||||||| |||| |||||||||||||    
T  41265617 cactggttaaacataccaaaaaagaaaattattacaataaaagaaaactgtttttgatttt-ttataaattaattacacaatttcactgcattaactact 41265519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16821011 - 16820912
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| |||||||||||||||||| ||| ||  | |||||||||||||| | ||||||| || ||||||||||||| ||||    
T  16821011 cactggttaagcataccataaaaggaaattattaccataaaaggaaactgcgtatgactttattataagttaattacagaatttcaatgcattaattact 16820912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 46688264 - 46688331
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||||| ||| || ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  46688264 taccataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactact 46688331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39877274 - 39877371
Alignment:
Q  1 cactggttaatcatat--cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaac 96  Q
    |||||||||| |||||  ||||||||  ||||||||| ||||||  ||| |||||||||||||||||||||| |||||||||| |||||| |||||||    
T  39877274 cactggttaagcatataccataaaagagaattattactataaaatgaaactgtttttgactttattataaattaattacacaatttcaatacattaac 39877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 53268875 - 53268782
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    ||||||| |||| || ||||| |||||||||  ||||||| ||||||||||||||||| |||||||| |||||||||| || |||||||||||||    
T  53268875 tggttaagcataccaaaaaagaaaattattattataaaagaaaattgtttttgacttt-ttataaattaattacacaattttaatgcattaacta 53268782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 49915301 - 49915218
Alignment:
Q  18 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||| |||||||||  ||||||| ||| ||||||| |||||||||||||| |||||||||| |||||| |||||| |||||    
T  49915301 ataaaaggaaattattattataaaaggaaactgttttttactttattataaattaattacacaatttcaatacattaattacta 49915218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 5091638 - 5091798
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| ||| ||||| |||||||||||||||| |||||||||| || |||  ||||| || |    
T  5091638 cactggttaagcata-cataaaagggaattattactataaaaggaaactgtttatgactttattataaattaattacacaattttaatatattaattatt 5091736  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    |||||||  ||||||||||  |||||| ||| |||||||| | ||||||| |||||||||    
T  5091737 a---tataattttatttttcatattcttaaccagtgccccgggagtaccggttagtatttccctt 5091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31517325 - 31517227
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaa-attgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    |||||||||| |||| |||| |||  ||||||||||||||||  || ||| |||||||||||||||| ||| |||||||| | ||||||||||||||||    
T  31517325 cactggttaagcataccatataagagaattattaccataaaaaaaacattatttttgactttattatcaattaattacactatttcaatgcattaacta 31517227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 50603386 - 50603292
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaat-tgtttttgactttattataaatgaattacacaagttcaatgcattaa 95  Q
    ||||||||| |||| ||||||||  |||||||| |||||||  |||  |||||||||| ||||||||||| |||||||||| |||||||||||||    
T  50603386 actggttaagcataccataaaagagaattattatcataaaaaaaaaactgtttttgacattattataaattaattacacaatttcaatgcattaa 50603292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 8133862 - 8133787
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacaca 80  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||||||||||||||| |||||||||    
T  8133862 tggttaaacata-cataaaagataattattaccataaaagaaaactatttttgactttattataaattaattacaca 8133787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 42815237 - 42815140
Alignment:
Q  33 taccataaaagt-aaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaac 131  Q
    |||||||||||  ||| |||||||||||||||||||||| ||||||| || |||||| |||||||||  |    |||||||||||||||||||| |||||    
T  42815237 taccataaaagagaaactgtttttgactttattataaattaattacataatttcaatacattaactatga---tataatttcctttttcatatccttaac 42815141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 52697210 - 52697082
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| |||||||||||||  ||||||||| ||||| | ||||| ||||||||||||||||||||  |||| | || || |||| ||||||||||    
T  52697210 cactcgttaaacatatcataaaagagaattattacaataaaggaaaattatttttgactttattataaat-tattatataattttaatgtattaactact 52697112  T
Q  101 actccataatttcctttttcatatcattaaccg 133  Q
    |    |||||||  ||||||||||| |||||||    
T  52697111 a---tataattttgtttttcatatccttaaccg 52697082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 50167685 - 50167590
Alignment:
Q  64 tataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    ||||||| |||||||||| ||||||||||||||||||     ||||||| |||||||||||| |||||| ||| |||| ||  | |||||||||||||||    
T  50167685 tataaattaattacacaatttcaatgcattaactact-----ataattttctttttcatatctttaaccagtgccccgagaacaccggttagcatttccc 50167591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 53003983 - 53004063
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaa 81  Q
    ||||| |||| |||||||||||||  ||||||||   |||||| ||||| ||||||||||||||||| || ||||||||||    
T  53003983 cactgattaagcatatcataaaagagaattattattttaaaaggaaattatttttgactttattatacattaattacacaa 53004063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 8133787 - 8133731
Alignment:
Q  109 atttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcccttt 165  Q
    |||| |||||||||||| |||||| ||| ||||||  | ||||||||||||||||||    
T  8133787 attttctttttcatatccttaaccagtgtccgggaagaccggttagcatttcccttt 8133731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 39877556 - 39877612
Alignment:
Q  106 ataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
    ||||||| |||||||||||| |||||| ||||||||| | | |||||| ||||||||    
T  39877556 ataattttctttttcatatcgttaaccagtgcccgggggtaccggttaacatttccc 39877612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 4e-40; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 16888574 - 16888728
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| || |||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||      
T  16888574 tggttaagcataccacaaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta-- 16888671  T
Q  104 ccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 161  Q
      |||||||||||||||||||| |||||| ||||||||| | | ||||||||||||||    
T  16888672 -tataatttcctttttcatatccttaacctgtgcccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27988526 - 27988687
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||| |    
T  27988526 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactatt 27988625  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||||| |||||| ||| | | |||||||||||||||||    
T  27988626 a---tataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28045828 - 28045989
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||| |    
T  28045828 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactatt 28045927  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||||| |||||| ||| | | |||||||||||||||||    
T  28045928 a---tataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9063079 - 9063239
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||||| |||| ||| | ||||||||||||||||||    
T  9063079 cactggttaagcatatcacaaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattgcacgatttcaatgcattaactact 9063178  T
Q  101 actccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||||| |||| ||||||  | |||||||||||||||||    
T  9063179 a---tataatttcctttttcatatccttaaccagtgctccggga-caccggttagcatttccctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 29444167 - 29444336
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  29444167 cactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcgttaactact 29444266  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttttgaaaat 172  Q
    |    |||||||||||||||||||| |||| | ||| |||||||| | |||||| ||||| |||||| |||||    
T  29444267 a---tataatttcctttttcatatccttaatcagtgccccgggagcaccggttaacattttcctttttaaaat 29444336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 33357156 - 33357317
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33357156 cactagttaagcataccataaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 33357255  T
Q  101 actccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||||| |||| ||||| | | | |||||||||||||||    
T  33357256 a---tataatttcctttttcatatccttaaccagtgctccgggggcaccagttagcatttccctt 33357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3930260 - 3930419
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||||||||||| ||||||||| || ||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  3930260 cactggttaagcatatcataaaaggaaattattatcaaaaaaggaaactgtttttgactttattatcaattaattacacaacttcaatgcattaactact 3930359  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
    |    |||||||||| |||||||| ||||||  ||||||||| | | || |||||||||||||    
T  3930360 a---tataatttcctctttcatattattaactagtgcccgggggcaccgattagcatttccct 3930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 21596005 - 21595848
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||| ||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||| ||    
T  21596005 cactggttaagcataccataaaagggaattaataccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactcct 21595906  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 161  Q
    |    |||||||||||||||||| | |||||| ||||||||| | | ||||||||||||||    
T  21595905 a---tataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 11112794 - 11112670
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||| |||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||       
T  11112794 ggttaagcataccataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta--- 11112698  T
Q  105 cataatttcctttttcatatcattaacc 132  Q
     |||||||||||||||||||| ||||||    
T  11112697 tataatttcctttttcatatccttaacc 11112670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 16785241 - 16785085
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    ||||||||||| ||||||||  ||||||||  ||||||| ||| |||||||||||||||||||||| |||||||||| |||||| |||||||| |||       
T  16785241 ggttaatcataccataaaagagaattattattataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaactgcta--- 16785145  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 164  Q
     |||||||| ||||||||||| |||||| |||||| |||| | |||||||||||||||||    
T  16785144 tataatttcttttttcatatccttaaccagtgccctggagcaccggttagcatttccctt 16785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 42035013 - 42035141
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||        
T  42035013 gttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactacta---t 42035109  T
Q  106 ataatttcctttttcatatcattaaccggtgc 137  Q
    |||||||||||||||||||| |||||| ||||    
T  42035110 ataatttcctttttcatatccttaaccagtgc 42035141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 168622 - 168463
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||      
T  168622 tggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta-- 168525  T
Q  104 ccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttcccttt 165  Q
      |||||||||||||||||| | |||||| |||||| ||| | | ||||||||||||||||||    
T  168524 -tataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12204013 - 12203854
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||| | |||| ||||||||  |||||||| |||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  12204013 cactggttcagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 12203914  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
    |    |||||||| ||||||||| | ||||||||| |||||| | | ||||||||||||||||    
T  12203913 a---tataatttcttttttcatacccttaaccggtacccgggggcaccggttagcatttccct 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12448441 - 12448282
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||| | |||| ||||||||  |||||||| |||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  12448441 cactggttcagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 12448342  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
    |    |||||||| ||||||||| | ||||||||| |||||| | | ||||||||||||||||    
T  12448341 a---tataatttcttttttcatacccttaaccggtacccgggggcaccggttagcatttccct 12448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 30675600 - 30675758
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| || ||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  30675600 cactggttaagcataccataaaaggaa-ttattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 30675698  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||    
T  30675699 a---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 34228841 - 34228706
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||| ||||    
T  34228841 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattact 34228742  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||||||||||||||| |||||| ||||||    
T  34228741 a---tataatttcctttttcatatccttaaccagtgccc 34228706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 40831419 - 40831302
Alignment:
Q  18 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttccttt 117  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    ||||||| ||||    
T  40831419 ataaaagaaaattattaccataaaagaaaattgtttttgactttattataaattaattatacaatttcaatgcattaactacta---tataattttcttt 40831323  T
Q  118 ttcatatcattaaccggtgcc 138  Q
    |||||||| |||||| |||||    
T  40831322 ttcatatctttaaccagtgcc 40831302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 4648352 - 4648193
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||||||||||||  |||||||||||| |||  ||| |||||||||| ||||||||||| |||||||||| ||||||| |||||||||||    
T  4648352 actggttaagcatatcataaaagggaattattaccatcaaaagaaactgtttttgacattattataaattaattacacaatttcaatgtattaactacta 4648253  T
Q  102 ctccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 164  Q
        |||||||||||||||||||| |||| | |||||| ||   | |||||||||||||||||    
T  4648252 ---tataatttcctttttcatatccttaatcagtgccccgggacaccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 16890511 - 16890642
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||   ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||       
T  16890511 ggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactacta--- 16890607  T
Q  105 cataatttcctttttcatatcattaaccggtgccc 139  Q
     |||||||||||||||||||| ||||| |||||||    
T  16890608 tataatttcctttttcatatccttaactggtgccc 16890642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 36730599 - 36730476
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| ||||  |||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||       
T  36730599 ggttaagcatactataaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta--- 36730503  T
Q  105 cataatttcctttttcatatcattaac 131  Q
     |||||||||||||||||||| |||||    
T  36730502 tataatttcctttttcatatccttaac 36730476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 13643170 - 13643009
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| || || |||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  13643170 cactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaattaattacataatttcaatgcattaactact 13643072  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 165  Q
    |    ||||||||||||||| |||| |||||| ||| |||||| | | |||||||||||| |||||    
T  13643071 a---tataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttccttt 13643009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 13743595 - 13743434
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| || || |||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  13743595 cactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaattaattacataatttcaatgcattaactact 13743497  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 165  Q
    |    ||||||||||||||| |||| |||||| ||| |||||| | | |||||||||||| |||||    
T  13743496 a---tataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttccttt 13743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 37373360 - 37373206
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||| ||||  ||||||||||||||||| ||| |||||| ||||||||||| ||| |||||||||| |||||||||||||||| ||       
T  37373360 ggttaagcataccatgaaagggaattattaccataaaagaaaactgttttcgactttattatcaattaattacacaatttcaatgcattaactatta--- 37373264  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
     |||||||||||||||||||| |||||| ||| ||||| | | |||||||||||||||    
T  37373263 tataatttcctttttcatatccttaaccagtgtccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 4537775 - 4537932
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| ||||||| || |||||||||||||||||||       
T  4537775 ggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacataatttcaatgcattaactacta--- 4537871  T
Q  105 cataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 164  Q
     |||||||||| ||| ||||| |||||| |||||| ||| | | |||||||||||||||||    
T  4537872 tataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 20831580 - 20831737
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||| |||| |||| ||||||||  ||||||||||||||||| ||| || ||||||||||||||||||| ||||| || | ||||||||||||||||||    
T  20831580 cactgattaagcataccataaaagagaattattaccataaaaggaaactgcttttgactttattataaattaattatactatttcaatgcattaactact 20831679  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttc 160  Q
    |    |||||||||||||||||||| |||||| ||| |||||| | | |||||||||||||    
T  20831680 a---tataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7304545 - 7304671
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||  |||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  7304545 cactggttaagcataccataaaagagaattattttcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 7304644  T
Q  101 actccataatttcctttttcatatcattaa 130  Q
    |    ||||||| |||||||||||| ||||    
T  7304645 a---tataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 43119373 - 43119216
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  |||||| |||||||||| ||| |||||||||||||||||||||| ||||| |||| |||||||||||||||||||      
T  43119373 tggttaagcataccataaaagagaattatcaccataaaagaaaactgtttttgactttattataaattaattatacaatttcaatgcattaactacta-- 43119276  T
Q  104 ccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
      ||||||| |||||||||||| |||| | ||| |||| | | | ||||||||||||||||    
T  43119275 -tataattttctttttcatatctttaatcagtgccccgagggcaccggttagcatttccct 43119216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 2805287 - 2805415
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| || ||||||||||||||||  | |||||||||| |||||||||||||||| |    
T  2805287 cactggttaagcataccataaaagggaattattaccataaaaggaaactgcttttgactttattataggttaattacacaatttcaatgcattaactatt 2805386  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    |||||||||||||||||||| ||||||    
T  2805387 a---tataatttcctttttcatatccttaacc 2805415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 28626927 - 28626792
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||| |||| |||| ||||||||  |||||||| |||||||  ||| |||||||||||||||||||||| ||| |||||| |||||| |||||||||||    
T  28626927 cactgattaagcataccataaaagggaattattatcataaaaagaaactgtttttgactttattataaattaatcacacaatttcaatacattaactact 28626828  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||||||||||| ||| |||||||||||||    
T  28626827 a---tataatttcctttttcacatccttaaccggtgccc 28626792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 9537851 - 9537979
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| |||||||||| ||||||  ||| |  |||||| |||||||||||| |||||||||| || |||||||||||||||    
T  9537851 cactggttaagcataccataaaaggaaattattactataaaaagaaactccttttgaatttattataaattaattacacaattttaatgcattaactact 9537950  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    |||||||||||||||||||| ||||||    
T  9537951 a---tataatttcctttttcatatccttaacc 9537979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 10870498 - 10870383
Alignment:
Q  14 tatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttc 113  Q
    |||||||||||  ||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||| ||||||| |||||||| ||    |||||||     
T  10870498 tatcataaaagggaattattaccataaaaggaaactgtttttgattttattataaattaattacacaatttcaatgtattaactatta---tataatttt 10870402  T
Q  114 ctttttcatatcattaacc 132  Q
    |||||| ||||||||||||    
T  10870401 cttttttatatcattaacc 10870383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 32114068 - 32113939
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagt-aaattgtttttgactttattataaatgaattacacaagttcaatgcattaactac 99  Q
    |||||||||| ||||  |||||||  |||||||| ||||||||  ||| ||||||| |||||||||||||| ||||| |||| |||||||||||||||||    
T  32114068 cactggttaaacatactataaaagggaattattatcataaaagggaaactgttttttactttattataaattaattaaacaatttcaatgcattaactac 32113969  T
Q  100 tactccataatttcctttttcatatcattaacc 132  Q
    ||    |||||||||||||||||||| ||||||    
T  32113968 ta---tataatttcctttttcatatccttaacc 32113939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 9253932 - 9254063
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||| ||||||| ||| |||||||||||||||||| | | |||||||||| |||||||||||||||||||      
T  9253932 tggttaagcataccataaaagagaattattactataaaaggaaactgtttttgactttattatcatt-aattacacaatttcaatgcattaactactat- 9254029  T
Q  104 ccataatttcctttttcatatcattaaccggtgccc 139  Q
      | |||||| ||||||||||| |||||| ||||||    
T  9254030 --aaaatttcatttttcatatccttaaccagtgccc 9254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 16394091 - 16394247
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||| ||| |||||||  | |||||||||||||||| ||      
T  16394091 tggttaagcataccataaaagagaattattagcataaaaggaaactgtttttgactttattatcaattaattacattatttcaatgcattaactatta-- 16394188  T
Q  104 ccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
      ||||||| |||||||| ||| |||||| ||| |||||| | | |||||||||||||||    
T  16394189 -tataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 17467751 - 17467635
Alignment:
Q  12 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatt 111  Q
    ||||| |||||| | ||||||||   |||||| ||||||||||||| |||||||| ||| |||||||||| ||||||||||||   | |||| |||||||    
T  17467751 catattataaaattgaattattatagtaaaaggaaattgtttttgattttattatcaattaattacacaatttcaatgcatta---attactgcataatt 17467655  T
Q  112 tcctttttcatatcattaac 131  Q
    ||||||||||||||||||||    
T  17467654 tcctttttcatatcattaac 17467635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 42433590 - 42433667
Alignment:
Q  20 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    ||||| |||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  42433590 aaaaggaaattattaccataaaagaaaactgtttttgacttt-ttataaattaattacacaatttcaatgcattaacta 42433667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 34192902 - 34192814
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatat 124  Q
    ||||||||||  ||||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||    |||||||||||||||||||    
T  34192902 taccataaaataaaattatttttgactttattataaattaattacacaatttcaatgcattaactagta---tataatttcctttttcatat 34192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39407001 - 39406905
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaact 97  Q
    |||| ||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| || || |||||||||    
T  39407001 cactagttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaattttaacgcattaact 39406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29235394 - 29235294
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||   ||||||| ||||||||| |||||||| ||  | ||||||| |||||||||||| |||||||||| || |||||||||||||||    
T  29235394 cactggttaagcatcctataaaaggaaattattatcataaaaggaacctatttttgattttattataaattaattacacaaatttaatgcattaactact 29235295  T
Q  101 a 101  Q
    |    
T  29235294 a 29235294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 22451929 - 22451847
Alignment:
Q  14 tatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaact 97  Q
    |||||| |||| |||||||||||||||||| ||  | ||||||||||| |||||||| |||||||||| |||||||||||||||    
T  22451929 tatcatgaaaggaaattattaccataaaaggaagctatttttgacttt-ttataaattaattacacaatttcaatgcattaact 22451847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 9278317 - 9278244
Alignment:
Q  55 tgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaac 131  Q
    |||||||||||||||| |||||||||| |||||||||||||||| ||    |||||||||||||||||||| |||||    
T  9278317 tgactttattataaattaattacacaatttcaatgcattaactatta---tataatttcctttttcatatctttaac 9278244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 24843307 - 24843393
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaat 88  Q
    |||| |||| |||| ||||||||  |||||||  |||||||| ||| || ||||||||||||||||||| |||||||||| ||||||    
T  24843307 actgattaagcataccataaaagagaattattgtcataaaaggaaactgattttgactttattataaattaattacacaatttcaat 24843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 22956838 - 22956766
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactac 99  Q
    |||| |||||||||||| ||| |||||||||| ||||||||||| ||||||| || || |||| |||||||||    
T  22956838 aatttttaccataaaaggaaactgtttttgacattattataaattaattacataattttaatgtattaactac 22956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 10618123 - 10618042
Alignment:
Q  55 tgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgccc 139  Q
    |||||||||||| ||| |||||||||| || | ||||||||||||||    ||||||| |||||||||||| |||||| ||||||    
T  10618123 tgactttattatcaattaattacacaatttaattgcattaactacta---tataattttctttttcatatccttaacctgtgccc 10618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 30933376 - 30933448
Alignment:
Q  28 attattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||| | |||||| ||| ||||||| ||||| |||||||| |||||||||| ||||||||||||| |||||    
T  30933376 attattatcgtaaaagaaaaatgtttttaacttt-ttataaattaattacacaatttcaatgcattaattacta 30933448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 12652707 - 12652630
Alignment:
Q  83 ttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccc 162  Q
    |||||||||||||||||||    |||||||||||||||||||| |||||| |||| || || | | |||||||||||||||    
T  12652707 ttcaatgcattaactactat---ataatttcctttttcatatccttaaccagtgctccaggggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 4e-40; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 34650860 - 34651018
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  34650860 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 34650959  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||||||| | |||||| ||||||||| | | |||||||||||||||    
T  34650960 a---tataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 13661963 - 13661805
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||       
T  13661963 ggttaagcataccataaaagagaattattaccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta--- 13661867  T
Q  105 cataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttcccttt 165  Q
     |||||||||||||||||||| |||||| |||| ||||| | | ||||||||||||||||||    
T  13661866 tataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttcccttt 13661805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6283721 - 6283562
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| || |    
T  6283721 cactggttaagcataccataaaaatgaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaattatt 6283622  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 162  Q
    |    ||||||| |||||||||||| |||||  |||||| ||| | | |||||||||||||||    
T  6283621 a---tataattttctttttcatatctttaactagtgccccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 35132677 - 35132519
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||||||||| | ||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||      
T  35132677 tggttaagcataccataaaagagaattattaccataaa-gaaaactgtttttgactttattataaattaattacacaatttcaatgtattaactacta-- 35132581  T
Q  104 ccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 165  Q
      |||||||||||||||||||| |||||| ||| |||||| | | ||||||||||||||||||    
T  35132580 -tataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttcccttt 35132519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 40564434 - 40564589
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||      
T  40564434 tggttaagcataccataaaagagaattattaccataaaaaaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta-- 40564531  T
Q  104 ccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
      |||||||||||||||| ||| |||| || || || |||  | ||||||||||||||||    
T  40564532 -tataatttcctttttcaaatccttaatcgatgtcccgga-caccggttagcatttccct 40564589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 11957994 - 11958153
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||  ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| |||| |||||||||||||    
T  11957994 cactggttaagcatgccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcattgcattaactact 11958093  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||| ||||| |||||| ||| |||||| | | |||||||||||||||    
T  11958094 a---tataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 10956109 - 10956012
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||    
T  10956109 actggttaagcatatcataaaaggaaattattaccataaaaggaaattgtttttgactttgttataaattaatta-acaatttcaatgcattaactact 10956012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 21547422 - 21547579
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||| |||||| |  |||||||| | |||||  ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21547422 actggttaagcataccataaatgagaattattaacttaaaatgaaactgtttttgactttattataaattaattacacaatttcaatgcattaactacta 21547521  T
Q  102 ctccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
        |||||||||||||| ||||| ||||||| ||||||||   | |||||||||||||||    
T  21547522 ---tataatttccttttttatatccttaaccgatgcccggggacaccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20175386 - 20175286
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| ||||| |||||||  |||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  20175386 cactagttaagcatattataaaagggaattattatcataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 20175287  T
Q  101 a 101  Q
    |    
T  20175286 a 20175286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 35504271 - 35504426
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||| |||||||||  || |||||||||| ||||||||||| |||||||||| |||||||||||||||||||       
T  35504271 ggttaagcataccataaaagggaattattgccataaaagggaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta--- 35504367  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
     |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||    
T  35504368 tataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 12506455 - 12506336
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||  ||||||||  ||||||||| ||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  12506455 cactggttaagcattccataaaagagaattattactataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 12506356  T
Q  101 actccataatttcctttttcata 123  Q
    |    ||||||||||||||||||    
T  12506355 a---tataatttcctttttcata 12506336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 19647717 - 19647846
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||| ||| ||||| |||||||||||| ||| ||||| |||| |||||||||||||||||||    |||||||||||||||||||| ||||||    
T  19647717 taccataaaaggaaactgtttatgactttattatcaattaattatacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 19647813  T
Q  133 ggtgcccgggaga-atcggttagcatttccctt 164  Q
     |||||| ||||| | |||||||||||| ||||    
T  19647814 agtgccccggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 13470283 - 13470175
Alignment:
Q  28 attattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcat 127  Q
    |||||||||||||||| ||| |||||||||||||||||||||| ||||| |||| ||||||||||| |||||||    || ||||||||||||||||| |    
T  13470283 attattaccataaaaggaaactgtttttgactttattataaattaattatacaatttcaatgcattgactacta---tattatttcctttttcatatcct 13470187  T
Q  128 taaccggtgccc 139  Q
    ||||| ||||||    
T  13470186 taaccagtgccc 13470175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 9721640 - 9721754
Alignment:
Q  7 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcca 106  Q
    |||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||| ||||| |||| ||||||||||||| |||||    |    
T  9721640 ttaaacataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattacta---ta 9721736  T
Q  107 taatttcctttttcatat 124  Q
    ||||||||||||||||||    
T  9721737 taatttcctttttcatat 9721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 8787494 - 8787337
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||   |||||||| |||||||| ||| |||||||||  ||||||||||| |||||||||| |||||||||||||||||||       
T  8787494 ggttaagcataccataaaatggaattattatcataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaactacta--- 8787398  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccctt 164  Q
     |||||||| ||||||||| | ||||||  ||||| || || | |||||||||||||||||    
T  8787397 tataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 10054384 - 10054540
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||   ||||||||||||||||| ||| |||||| ||| ||||||||||| |||||||||| ||||||||||||| || ||       
T  10054384 ggttaaacataccataaaaaggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaattatta--- 10054479  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
     |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||||    
T  10054480 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 4837364 - 4837256
Alignment:
Q  53 tttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggtt 152  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||    |||||||||||||||||||  ||||||||||||| || | | |||||    
T  4837364 tttgactttattataaattaattacacaatttcaatgcattaattacta---tataatttcctttttcatattcttaaccggtgccccggggcaccggtt 4837268  T
Q  153 agcatttccctt 164  Q
    | ||||||||||    
T  4837267 aacatttccctt 4837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 162
Target Start/End: Complemental strand, 10070095 - 10069969
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||  ||| |||||||||||||||||| | | |||||||||| |||||||||||||||||||    |||||||||||||||||||| ||||||    
T  10070095 taccataaaaagaaactgtttttgactttattatcatt-aattacacaatttcaatgcattaactactat---ataatttcctttttcatatccttaacc 10070000  T
Q  133 ggtg-cccgggagaatcggttagcatttccc 162  Q
     ||| |||||| | | |||||||||||||||    
T  10069999 agtgccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 40057466 - 40057331
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| || ||||||||||  || |||||| ||||||| ||| || |||||| |||||||||||| ||||| || | ||||||||| ||||||||    
T  40057466 cactggttaaacacatcataaaagggaaatattactataaaagaaaactgcttttgattttattataaattaattatactatttcaatgcactaactact 40057367  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||||||||||||||| |||| ||||||||    
T  40057366 a---tataatttcctttttcatatccttaatcggtgccc 40057331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 11846231 - 11846110
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||  |||||||  | ||||||||||||||| ||| |  ||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  11846231 cactggttaagcatactataaaagggatttattaccataaaaggaaactacttttgactttattataaattaattacacaatttcaatgtattaactact 11846132  T
Q  101 actccataatttcctttttcatatc 125  Q
    |    |||||||||||||| |||||    
T  11846131 a---tataatttccttttttatatc 11846110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 31909784 - 31909629
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||| |||||||| ||||||||| ||     | ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  31909784 actggttaagcataccataaaagaaaattattatca-----ggaaactgtttttgactttattataaatcaattacacaatttcaatgcattaactacta 31909690  T
Q  102 ctccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcccttt 165  Q
        ||||||||| |||| ||||| |||||| ||  ||||  | | |||||| |||||||||||    
T  31909689 ---tataatttcccttttaatatccttaaccagtatccggaggcaccggttaacatttcccttt 31909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 39066973 - 39067091
Alignment:
Q  12 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatt 111  Q
    |||| ||||||||  ||||||||||||||||| | |||||||||||||||||||||||| ||||||| || ||||||  ||||||||  | |  ||||||    
T  39066973 cataacataaaagagaattattaccataaaaggatattgtttttgactttattataaattaattacataatttcaatatattaacta--attatataatt 39067070  T
Q  112 tcctttttcatatcattaacc 132  Q
    || ||||||||||| ||||||    
T  39067071 tcttttttcatatccttaacc 39067091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 4268716 - 4268621
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||||| |||| || ||||| |||||||||||||||||| ||| ||||||| | ||| |||||||| |||||||||| || ||||||||||||||||    
T  4268716 ggttaagcataccaaaaaagaaaattattaccataaaaggaaactgttttttatttt-ttataaattaattacacaattttaatgcattaactacta 4268621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 39069526 - 39069379
Alignment:
Q  12 catatcataaaagtaaattattaccataaaagtaaattgtttttgac-tttattataaatgaattacacaagttcaatgcattaactactactccataat 110  Q
    |||||||||||||  ||||||||||||||||| ||||||||||| ||  ||||||||    |||||||||| || ||||||||||||||||    |||||    
T  39069526 catatcataaaagagaattattaccataaaaggaaattgtttttcacaattattata---taattacacaattttaatgcattaactacta---tataat 39069433  T
Q  111 ttcctttttcatatcattaaccggtgccc-gggagaatcggttagcatttccctt 164  Q
    |||| |||||||| | |||||| |||||| || || | |||||||||||||||||    
T  39069432 ttcc-ttttcatacccttaaccagtgccctggaagcaccggttagcatttccctt 39069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 2619635 - 2619711
Alignment:
Q  52 ttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaac 131  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||||||    ||||||| |||||||||||| |||||    
T  2619635 ttttaactttattataaattaattacacaatttcaatacattaactacta---aataattttctttttcatatccttaac 2619711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19436865 - 19436990
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||| || |||| ||||||||  ||||||||||||||||  ||| | ||||| |||||| ||||||| ||||| |||| |||||||| ||||| |||    
T  19436865 cactggtgaaacataccataaaagagaattattaccataaaa-aaaactatttttaacttta-tataaattaattatacaatttcaatgctttaaccact 19436962  T
Q  101 actccataatttcctttttcatatcattaac 131  Q
    |    |||||||||||||||||||| |||||    
T  19436963 a---tataatttcctttttcatatccttaac 19436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 12072089 - 12072251
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  12072089 cactggttaagcataccataaaaaggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactact 12072188  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 165  Q
    |   ||||||||||||||||||||| |||||||||| |||||| | | |||||||||||| |||||    
T  12072189 a---cataatttcctttttcatatccttaaccggtgccccgggggcaccggttagcattttccttt 12072251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 47010152 - 47009982
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||| |||||| |||||||||||    
T  47010152 cactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgaatttattataaattaattacacaatttcaatacattaactact 47010053  T
Q  101 actccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttcccttttgaaaata 173  Q
    |    |||||||||||||||||||| |||||| |||| ||||  | | || |||||||||||||||||||||||    
T  47010052 a---tataatttcctttttcatatccttaaccagtgctccggatgcaccgattagcatttcccttttgaaaata 47009982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 3784744 - 3784873
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||       
T  3784744 ggttaagcataccataaaaggaaattattaccataaaagaaaattgtttttgactttattatcaattaattacacaatttcaatgcattaactacta--- 3784840  T
Q  105 cataatttcctttttcatatcattaaccggtgc 137  Q
     |||||||||||||||||||| |||||| ||||    
T  3784841 tataatttcctttttcatatccttaaccagtgc 3784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 3097817 - 3097690
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  3097817 actggttaagcataccataaaaggaaattattaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactacta 3097718  T
Q  102 ctccataatttcctttttcatatcattaacc 132  Q
        |||||||||||||||||||| ||||||    
T  3097717 ---tataatttcctttttcatatccttaacc 3097690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24178490 - 24178649
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||  |||||||||||||||||| ||| || |||||||||||||||| || |||||||||| |||||||||||||||| |    
T  24178490 cactggttaagcataccataaaatgaaattattaccataaaaggaaactgcttttgactttattatagattaattacacaatttcaatgcattaactatt 24178589  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||||||||| |||||| ||| |||||| | |||||||||||||||||    
T  24178590 a---tataatttcctttttcatatccttaaccagtgccccgggggcatcggttagcatttccc 24178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 48071637 - 48071482
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| ||||  |||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||| ||       
T  48071637 ggttaagcatactataaaagataattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactatta--- 48071541  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
     ||||||||||||| |||||| |||||| || ||| |||| ||||||||||||||||||    
T  48071540 tataatttccttttacatatccttaaccagtaccccggagcatcggttagcatttccct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 51065775 - 51065937
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  51065775 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaactact 51065874  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 165  Q
    |    ||||||| |||||||||||| |||||| ||| ||||||   | ||||||||||||||||||    
T  51065875 a---tataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttcccttt 51065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 15227898 - 15227737
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||| ||||    
T  15227898 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattact 15227799  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||||| ||| ||| || | | |||||||||||||||||    
T  15227798 a---tataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 42770017 - 42770178
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| ||||||||||||||||||    
T  42770017 cactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaactact 42770116  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||| |||||||| ||| |||||| | | |||||||||||||||||    
T  42770117 a---tataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttccctt 42770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 19031846 - 19032002
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||  ||||||||||       
T  19031846 ggttaagcatatcataaaaggaaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgttttaactacta--- 19031942  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
     |||||||||||||||||||| |||||   || ||| |||| | ||||||||||||||||    
T  19031943 tataatttcctttttcatatccttaactaatgcccccggagcaccggttagcatttccct 19032002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 5694480 - 5694321
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  5694480 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactact 5694381  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 162  Q
    |    ||||||||| |||| ||||| |||||| |||||| ||| | | |||||||||||||||    
T  5694380 a---tataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 17333325 - 17333476
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    ||||||||  || ||||| |||||||| ||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||    |||||||||||    
T  17333325 cataaaagggaagtattatcataaaaggaaactgtttttgactttattatgaattaattacacaatttcaatgcattaactacta---tataatttcctt 17333421  T
Q  117 tttcatatcattaaccggtgcccgggagaatcggttagcatttcccttttgaaaa 171  Q
    ||||||||| |||||| ||||||||| | | ||||||||||||||| ||| ||||    
T  17333422 tttcatatccttaaccagtgcccgggggcaccggttagcatttcccatttaaaaa 17333476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 18043321 - 18043158
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  18043321 cactggttaagcataccataaaatagaattattaccataaaagaaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 18043222  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctttt 166  Q
    |    |||||||||||||| ||| | |||||| |||||| ||| | | |||||||||||||||||||    
T  18043221 a---tataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttccctttt 18043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29657930 - 29657770
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||| ||||| ||| |||||||||||||||||| ||| ||||| |||| ||||||||||||||||||    
T  29657930 cactggttaagcataccataaaagggaattattaccaaaaaaggaaactgtttttgactttattatcaattaattatacaatttcaatgcattaactact 29657831  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
    |    |||||||||||||| ||||| |||||| ||| |||||| | | ||||||||||||||||    
T  29657830 a---tataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 164
Target Start/End: Original strand, 14350330 - 14350465
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| || |||||||||||||| |    |||||||||||||||||| |     
T  14350330 aattattaccataaaaggaaattgtttttgacattattataaattaattacacaattttaatgcattaactacaat---ataatttcctttttcataccc 14350426  T
Q  127 ttaaccggtgc-ccgggagaatcggttagcatttccctt 164  Q
    ||||||||||| ||||| | | |||||||||||||||||    
T  14350427 ttaaccggtgctccgggggcaccggttagcatttccctt 14350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 45431437 - 45431278
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||||  ||||||||||||  ||||||||||||||||| ||| | |||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  45431437 cactggttaagtatatcataaaagagaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaactact 45431338  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
    |    |||||||||||||||||||| |||| | |  || ||| | | ||||||||||||||||    
T  45431337 a---tataatttcctttttcatatccttaatcaggccctgggggcaccggttagcatttccct 45431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9266755 - 9266889
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||||  ||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||| ||||    
T  9266755 cactggttaagtataccataaaagcgaattattaccataaaaggaaactgtttttgactttattatgaattaattacacaatttcaatgcattaaatact 9266854  T
Q  101 actccataatttcctttttcatatcattaaccggtgcc 138  Q
    |    |||||||||||||||||||| |||||| |||||    
T  9266855 a---tataatttcctttttcatatccttaaccagtgcc 9266889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 6770495 - 6770370
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||||||||||||  |||||||| |||||||  ||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  6770495 actggttaagcatatcataaaagggaattattatcataaaatgaaactgtttttgactttattataaattaattacacaatttcaatacattaactacta 6770396  T
Q  102 ctccataatttcctttttcatatcattaa 130  Q
        |||||||||||||||||||| ||||    
T  6770395 ---tataatttcctttttcatatccttaa 6770370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 41730467 - 41730329
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||| ||||| |||| ||||||||||||| ||||    
T  41730467 cacttgttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattact 41730368  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |||  |||||||| ||||||||||  |||||| ||||||    
T  41730367 actatataatttcttttttcatattcttaacccgtgccc 41730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13961370 - 13961211
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| |||||||||||||||||  ||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  13961370 cactggttaagcataccataaaagaaaattattaccataaaatgaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactact 13961271  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
    |    |||||||  ||||| ||||| |||||| ||| |||||| | | ||||||||||||||||    
T  13961270 a---tataattt-tttttttatatccttaacccgtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 30294412 - 30294536
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||  ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||       
T  30294412 ggttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta--- 30294508  T
Q  105 cataatttcctttttcatatcattaacc 132  Q
     |||||||||||||||||||| ||||||    
T  30294509 tataatttcctttttcatatccttaacc 30294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 38163005 - 38162869
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||       
T  38163005 ggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta--- 38162909  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggag 144  Q
     ||||||| |||||||||| | |||||| |||||| ||||    
T  38162908 tataattttctttttcatacccttaaccagtgccccggag 38162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36446352 - 36446452
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  36446352 cactggttaaacataccataaaagggaattattactataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 36446451  T
Q  101 a 101  Q
    |    
T  36446452 a 36446452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 29683355 - 29683193
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||| ||||||||| ||||||  ||| |||||||||||||||||||||| ||||| || | ||||||||||||||||||    
T  29683355 cactggttaagcataccataaaagtgaattattactataaaatgaaactgtttttgactttattataaattaattatacgatttcaatgcattaactact 29683256  T
Q  101 actccataatttcc-tttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    ||||||||| ||||| ||||| |||||| ||| |||||| | | |||||||||||||||||    
T  29683255 a---tataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 38335317 - 38335200
Alignment:
Q  12 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatt 111  Q
    |||| ||||||||| |||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| | ||||||||||| |||||    ||||||    
T  38335317 cataccataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaattacacaattacaatgcattaattacta---tataatt 38335221  T
Q  112 tcctttttcatatcattaacc 132  Q
    |||||||||||||| ||||||    
T  38335220 tcctttttcatatctttaacc 38335200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 29210540 - 29210412
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||    |||||||||||||||||| | ||||||    
T  29210540 taccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatacccttaacc 29210444  T
Q  133 ggtgcccggga-gaatcggttagcatttccct 163  Q
     |||||| ||| | | ||||||||||||||||    
T  29210443 agtgccccggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 38701986 - 38702117
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||| ||||||| || |||||||||||||||||||    ||| |||||||||||||| |     
T  38701986 aattattaccataaaagaaaactgtttttgacattattataaattaattacataatttcaatgcattaactacta---tatagtttcctttttcataccc 38702082  T
Q  127 ttaaccggtg-cccgggagaatcggttagcatttc 160  Q
    |||||| ||| |||||||| | |||||||||||||    
T  38702083 ttaaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 51368812 - 51368974
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||   ||||||||| ||||||| ||| | |||||||| ||||||||||| || ||||||| ||||||||||||||||||    
T  51368812 cactggttaagcataccataaaatggaattattactataaaaggaaactatttttgacattattataaattaactacacaatttcaatgcattaactact 51368911  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttcccttt 165  Q
    |    |||||||||||||||||| | |||||| || ||| ||| | | ||||||||||||||||||    
T  51368912 a---tataatttcctttttcatacccttaaccagtaccctggaggtaccggttagcatttcccttt 51368974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12307076 - 12306978
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactac 99  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||  |||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  12307076 cactggttaagcataccataaaagagaattattaccataaaaggaatctgtttttgactttattataaattaattacacaatttcaatgtattaactac 12306978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 35985674 - 35985774
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||    |||||||||||||| |||||     
T  35985674 aattattaccataaaaggaaactgtttttcactttattataaattaattacacaatttcaatgcattaactacta---tataatttccttttttatatcc 35985770  T
Q  127 ttaa 130  Q
    ||||    
T  35985771 ttaa 35985774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 50128199 - 50128299
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||  ||| || |||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  50128199 cactggttaagcataccataaaagagaattattaccataaaatgaaactgcttttaactttattataaattaattacacaatttcaatgcattaactact 50128298  T
Q  101 a 101  Q
    |    
T  50128299 a 50128299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43286881 - 43286720
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| ||| | |||||||||||||||||||| ||||||| || |||||  ||||||||| |    
T  43286881 cactggttaagcataccataaaagagaattattactataaaaggaaactatttttgactttattataaattaattacataatttcaaaacattaactatt 43286782  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||||| ||| ||| ||   |||||||||||||| ||||    
T  43286781 a---tataatttcctttttcatatccttaaccagtgtcccagggacatcggttagcattttcctt 43286720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 30657724 - 30657604
Alignment:
Q  44 taaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtg-cccggg 142  Q
    |||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||    |||||||| ||||||||||  |||||  ||| ||||||    
T  30657724 taaactgtttttgactttattataaattaattacataatttcaatgcattaactacta---tataatttcttttttcatatgcttaactagtgccccggg 30657628  T
Q  143 agaatcggttagcatttccctttt 166  Q
    || | |||||||||||||||||||    
T  30657627 agcaccggttagcatttccctttt 30657604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 45449271 - 45449399
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| || ||||||||||||||||| | |||||||| | || |||||||||||||||    
T  45449271 cactggttaaacataccataaaaggcaattattaccataaaaggaaactgcttttgactttattataatttaattacactattttaatgcattaactact 45449370  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    ||||||| |||||| ||||| ||||||    
T  45449371 a---tataattttcttttttatatctttaacc 45449399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 161
Target Start/End: Complemental strand, 30217916 - 30217763
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| |||||||  |||||||||||||||||| ||| | |||||||||||||||||||| ||||| | || || ||||||||||||||| |||     
T  30217916 gttaagcataccataaaaagaaattattaccataaaagaaaactatttttgactttattataaattaattaaataatttaaatgcattaactact-ctc- 30217819  T
Q  106 ataatttcc--tttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 161  Q
     ||||| ||  ||||||||||| ||| || |||||| |||| ||||||||||||||||    
T  30217818 -taattccctttttttcatatccttagccagtgccc-ggagcatcggttagcatttcc 30217763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 8472941 - 8473069
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||||  ||| ||||||||  ||||||||  ||||||  ||| |||||||||||||||||||||| |||||||||| || ||||||||||||| |    
T  8472941 cactggttaagtataccataaaagagaattattattataaaatgaaactgtttttgactttattataaattaattacacaattttaatgcattaactatt 8473040  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    |||||||||||||| ||||| ||||||    
T  8473041 a---tataatttccttttttatatccttaacc 8473069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 47532701 - 47532824
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||  ||||||| ||||| ||||||||||||||||  || |||||||||| |||||||||||||||||||      
T  47532701 tggttaagcataccataaaagggaattattattataaaaggaaattatttttgactttattat-cattaattacacaatttcaatgcattaactacta-- 47532797  T
Q  104 ccataatttcctttttcatatcattaac 131  Q
      ||||||| |||||||||||| |||||    
T  47532798 -tataattttctttttcatatccttaac 47532824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 52431720 - 52431640
Alignment:
Q  20 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||| |||||||||||||||||| |||||| ||||||| || |||||||| |||||||||| |||||||||||||||||||    
T  52431720 aaaaggaaattattaccataaaagaaaattgcttttgacatt-ttataaattaattacacaatttcaatgcattaactacta 52431640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 48383141 - 48383294
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||  | |||||| ||||||||   |      
T  48383141 tggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacattatttcaatacattaactttca-- 48383238  T
Q  104 ccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcattt 159  Q
      ||||||| |||||||| ||| |||||| ||| |||||||| | ||||||||||||    
T  48383239 -tataattttctttttcacatccttaaccagtgccccgggagcaccggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 52749757 - 52749600
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||   ||||||||||||||||  ||||||||||| |||||||| |||||  | || |||| |||||| ||||||||| ||       
T  52749757 ggttaaacataccataaaaaggaattattaccataaaaaaaaattgtttttaactttattgtaaatttagtatacaatttcaatacattaactatta--- 52749661  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccctt 164  Q
     |||||||||||||||||||| ||||||  ||||| |  || |||||||||||||||||||    
T  52749660 tataatttcctttttcatatctttaaccaatgccccgcggatatcggttagcatttccctt 52749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 23473495 - 23473619
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| ||||| ||||||  |||||||||||||||||| ||| || |||  |||||||||||||| ||||| |||| |||||| |||||||| |||       
T  23473495 ggttaagcatattataaaaagaaattattaccataaaaggaaactgctttaaactttattataaattaattatacaatttcaatacattaactgcta--- 23473591  T
Q  105 cataatttcctttttcatatcattaacc 132  Q
     ||||| |||||||||||||| ||||||    
T  23473592 tataatctcctttttcatatccttaacc 23473619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 15282591 - 15282702
Alignment:
Q  51 tttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcgg 150  Q
    |||||||||||||||||||| |||||||||| ||||||  |||||||||||    ||||||| |||||||||||| |||||| || ||  |||  ||| |    
T  15282591 tttttgactttattataaattaattacacaatttcaatatattaactacta---tataattttctttttcatatccttaaccagtacctcggaatatccg 15282687  T
Q  151 ttagcatttcccttt 165  Q
    |||||||||||||||    
T  15282688 ttagcatttcccttt 15282702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19010714 - 19010778
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttatta 65  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| ||| | |||||||||||||||    
T  19010714 cactggttaatcataccataaaagggaattattaccataaaaggaaactatttttgactttatta 19010778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 37315320 - 37315394
Alignment:
Q  26 aaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||||||| ||| ||| ||||||||| |||||||| ||||||| || |||||||||||||||||||    
T  37315320 aaattattagcataaaagaaaactgtctttgacttt-ttataaattaattacataatttcaatgcattaactacta 37315394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 39497430 - 39497340
Alignment:
Q  37 ataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaa 130  Q
    ||||||| ||||| |||||||||||||||||||| ||||| | || || ||||||||||||||||    ||||||| |||||||||||| ||||    
T  39497430 ataaaagaaaattatttttgactttattataaattaattatataattttaatgcattaactacta---tataattttctttttcatatccttaa 39497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 3838824 - 3838901
Alignment:
Q  20 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    ||||| |||||||| ||||||||  |||||| ||||||| || |||||||| |||||||||| || |||||||||||||    
T  3838824 aaaaggaaattattgccataaaaaaaaattgcttttgacatt-ttataaattaattacacaattttaatgcattaacta 3838901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 14881036 - 14881086
Alignment:
Q  31 attaccataaaagtaaattgtttttgactttattataaatgaattacacaa 81  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||| ||||    
T  14881036 attaccataaaaggaaactgtttttgactttattataaattaattatacaa 14881086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 37503346 - 37503273
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| |||||||||||| ||| | ||||||| ||| |||||||| |||||||||| ||||||| |||||||||||    
T  37503346 aattgttaccataaaaggaaaatatttttgatttt-ttataaattaattacacaatttcaatgtattaactacta 37503273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 26228300 - 26228252
Alignment:
Q  53 tttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||| |||||||||||| ||||||| || |||||||||||||||||||    
T  26228300 tttgattttattataaattaattacataatttcaatgcattaactacta 26228252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 19011057 - 19011094
Alignment:
Q  64 tataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  19011057 tataaattaattacacaatttcaatgcattaactacta 19011094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 19011108 - 19011180
Alignment:
Q  86 aatgcattaactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcc 161  Q
    ||||||||||||||||    |||||||||||||||||||| |||||| |||||| ||   | ||||||||||||||    
T  19011108 aatgcattaactactat---ataatttcctttttcatatccttaacccgtgccccgggacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 7e-39; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 2350810 - 2350654
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||||||||||||  ||||||||||||||||| ||| | |||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  2350810 actggttaagcatatcataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaactacta 2350711  T
Q  102 ctccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttc 160  Q
        |||||||||||||||||||| |||||| ||| |||||||| | |||||||||||||    
T  2350710 ---tataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 18276658 - 18276804
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    |||||||||||    
T  18276658 cataaaaggaaattattaccataaaaggaaactgtttttgactttattataaattaattacacaaattcaatgcattaactacta---tataatttcctt 18276754  T
Q  117 tttcatatcattaaccggtgcccgggagaatcggttagcatttccctttt 166  Q
    ||||||||| |||||| |||||| || | | | |||| ||||||||||||    
T  18276755 tttcatatccttaaccagtgcccaggggcaccagttaacatttccctttt 18276804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1391205 - 1391365
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1391205 cactggttaagcataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaattaattatacaatttcaatgcattaactact 1391304  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||| | || ||| |||| | |||||||||||||||||    
T  1391305 a---tataatttcctttttcatatccttaatcagtaccccggagcaccggttagcatttccctt 1391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 392255 - 392096
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  392255 cactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 392156  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||    
T  392155 a---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 26467151 - 26467286
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||  |||| ||||||||  ||||||||||||||||| ||| | |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  26467151 cactggttagacataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactact 26467250  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||||||||||||||| |||||||||||||    
T  26467251 a---tataatttcctttttcatatccttaaccggtgccc 26467286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 3515921 - 3515763
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||||       
T  3515921 ggttaaacataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta--- 3515825  T
Q  105 cataatttcctttttcatatcattaaccggtgccc-gggagaatcggttagcatttcccttt 165  Q
     |||||||||||||||||| | |||||| |||||| ||| | | ||||||||||||||||||    
T  3515824 tataatttcctttttcatacccttaaccagtgccctgggggcaccggttagcatttcccttt 3515763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12145144 - 12145271
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||  ||||||| ||||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  12145144 cactggttaagcatactataaaaggaaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 12145243  T
Q  101 actccataatttcctttttcatatcattaac 131  Q
    |    |||||||||||||||||||| |||||    
T  12145244 a---tataatttcctttttcatatccttaac 12145271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 29451146 - 29451301
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  |||||||| |||||||| ||| ||| |||||||||||||||| | |||||||||| |||||||||||||||||||       
T  29451146 ggttaagcataccataaaagggaattattatcataaaaggaaactgtgtttgactttattataatttaattacacaatttcaatgcattaactacta--- 29451242  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
     |||||||||||||||||||| |||||||||||||||  | | | ||||||||||||||    
T  29451243 tataatttcctttttcatatccttaaccggtgcccggaggcaccagttagcatttccct 29451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 34851876 - 34852003
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||| |||||||  ||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  34851876 cactggttaagcatattataaaagagaattattactataaaaggaaattatttttgactttattataaatcaattacacaatttcaatgcattaactact 34851975  T
Q  101 actccataatttcctttttcatatcattaac 131  Q
    |    |||||||||||||||||||| |||||    
T  34851976 a---tataatttcctttttcatatctttaac 34852003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 32929535 - 32929697
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||| || |    
T  32929535 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaattaat 32929634  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 165  Q
    |    |||||||||||||||||| | ||||||  || |||||| | | ||||||||||||||||||    
T  32929635 a---tataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttcccttt 32929697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 2581108 - 2580983
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||| || |||||||||||||||||||      
T  2581108 tggttaagcataccataaaagggaattattaccataaaaggaaattatttttgactttattataaattaattacataatttcaatgcattaactacta-- 2581011  T
Q  104 ccataatttcctttttcatatcattaacc 132  Q
      |||||||||||||| ||||||||||||    
T  2581010 -tataatttccttttttatatcattaacc 2580983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 4215854 - 4215693
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||| |    
T  4215854 cactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactatt 4215755  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    ||||||||||||||||||   |||||| ||| |||||| | | |||||| ||||||||||    
T  4215754 a---tataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctt 4215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 23402293 - 23402136
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||| ||||||||||||| |||||       
T  23402293 ggttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaatttcacaatttcaatgcattaattacta--- 23402197  T
Q  105 cataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 164  Q
     |||||||||||||||||||| |||||| |||||| ||| | | | |||||||||||||||    
T  23402196 tataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 7851191 - 7851347
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||        
T  7851191 gttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaattttaatgcattaattacta---t 7851287  T
Q  106 ataatttcctttttcatatcattaaccggtgccc-gggagaatcggttagcatttccctt 164  Q
    ||||||| |||||||||||| |||||| |||||| ||| | | |||||||||||||||||    
T  7851288 ataattttctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 21878400 - 21878533
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||||||||||  ||| |||||||||||||||||||||| ||||| | || |||||||||||||||||||    ||||||||||||||||||||     
T  21878400 aattattaccataaaaagaaactgtttttgactttattataaattaattaaataatttcaatgcattaactacta---tataatttcctttttcatatcc 21878496  T
Q  127 ttaaccggtgcccggga-gaatcggttagcatttccc 162  Q
    |||||| |||||||||| | | |||||||||||||||    
T  21878497 ttaacccgtgcccgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 29978389 - 29978233
Alignment:
Q  3 ctggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactac 102  Q
    |||||||| |||||||||||||  |||||||||||||||| |||| ||||||||||||||||||||||  |||||| || |||||| |||||| |||||     
T  29978389 ctggttaagcatatcataaaagggaattattaccataaaattaaactgtttttgactttattataaatatattacataatttcaatacattaaatacta- 29978291  T
Q  103 tccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
       |||||||||||||||||||| |||||  ||| ||||  | | |||||||||||||||    
T  29978290 --tataatttcctttttcatatccttaactagtgtccggaggcaccggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 32985220 - 32985348
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  32985220 cactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaactact 32985319  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    |||||||||||||| ||||| ||||||    
T  32985320 a---tataatttccttttttatatccttaacc 32985348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 23629619 - 23629761
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    |||||||| ||||||||  |||||||| |||||||||||||||||||||||||  |||||||||| |||||| ||||||||||||    ||||||| |||    
T  23629619 cataaaagaaaattattgtcataaaaggaaattgtttttgactttattataaagtaattacacaatttcaatacattaactacta---tataattttctt 23629715  T
Q  117 tttcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
    ||||||||| |||| | |||||| || | |||||||| ||||||||    
T  23629716 tttcatatccttaatcagtgccccggggcatcggttaacatttccc 23629761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 20898075 - 20897946
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||| ||| ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||    |||||||||||||||||||| ||||||    
T  20898075 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 20897979  T
Q  133 ggtgccc-gggagaatcggttagcatttccctt 164  Q
     |||||| ||| | | |||||||||||||||||    
T  20897978 agtgccctgggggcaccggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 27433647 - 27433491
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||| |||| |||||| |||||||||| || ||||||||||||||||       
T  27433647 ggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactacta--- 27433551  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
     |||||||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||    
T  27433550 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 35044048 - 35043921
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| || ||||||| ||||||| ||||||||||    
T  35044048 cactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaa-tacacaatttcaatgaattaactact 35043950  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    |||||||| ||||||||||| ||||||    
T  35043949 a---tataatttcttttttcatatccttaacc 35043921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 12525878 - 12525716
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| |||||||||||||  ||||||||||||||||  ||| ||| |||||| ||||||||||| |||||||||  ||||||| ||||||||||    
T  12525878 cactagttaagcatatcataaaagggaattattaccataaaatgaaactgtgtttgacattattataaattaattacacattttcaatgtattaactact 12525779  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttcccttt 165  Q
    |    |||||||||||||||||| | |||||| || ||| ||| | | ||||||||||||||||||    
T  12525778 a---tataatttcctttttcatacccttaaccagtaccccggaggcaccggttagcatttcccttt 12525716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 34477609 - 34477715
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||| ||| ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||    |||||||||||||||||||| ||||||    
T  34477609 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 34477705  T
Q  133 ggtgcccggg 142  Q
     |||||||||    
T  34477706 agtgcccggg 34477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 3026036 - 3026196
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||| |||| |||| ||||||||  ||||||||| ||||||| ||| |||||||||| ||||||||||| ||||| |||| ||||||||||||||||||    
T  3026036 cactgattaagcataccataaaagagaattattacgataaaagaaaactgtttttgacattattataaattaattatacaatttcaatgcattaactact 3026135  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttcccttt 165  Q
         |||||||| ||||||||| | |||||| ||||||||| | | | ||||||||||||||||    
T  3026136 gt---ataatttcatttttcatacccttaaccagtgcccggg-gcaccagttagcatttcccttt 3026196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 25165443 - 25165568
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||||| ||||||  |||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| ||||||  |||||||||||      
T  25165443 tggttaagcatatcgtaaaagagaattattatcataaaagaaaactgtttttgactttattataaattaattacacaatttcaatatattaactacta-- 25165540  T
Q  104 ccataatttcctttttcatatcattaacc 132  Q
      |||||||| ||||||||||| ||||||    
T  25165541 -tataatttcttttttcatatccttaacc 25165568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 34396602 - 34396715
Alignment:
Q  49 tgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtg-cccgggagaat 147  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||    |||||||||||||||||||| |||||| ||| || ||| | |     
T  34396602 tgtttttgactttattataaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacctgtgtcctgggggcac 34396698  T
Q  148 cggttagcatttccctt 164  Q
    |||||||||||||||||    
T  34396699 cggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 13416986 - 13417116
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgact---ttattataaatgaattacacaagttcaatgcattaact 97  Q
    |||||||||| ||||| |||||||  ||||||||||||||||| ||| |||||||||||   ||||||||||| |||||||||| |||||| ||||||||    
T  13416986 cactggttaagcatattataaaagagaattattaccataaaagaaaactgtttttgactttattattataaattaattacacaatttcaatacattaact 13417085  T
Q  98 actactccataatttcctttttcatatcattaac 131  Q
    | ||    |||||||||||||||||||| |||||    
T  13417086 aata---tataatttcctttttcatatccttaac 13417116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 28225363 - 28225252
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||    |||| ||||||    
T  28225363 cataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattacta---tataa-ttcctt 28225268  T
Q  117 tttcatatcattaacc 132  Q
    ||||||||| ||||||    
T  28225267 tttcatatccttaacc 28225252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11115124 - 11115256
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||||||||||||  ||||||||||||||||| ||| | |||||||  ||||||||||| |||||||||| ||||||| |||||||| |    
T  11115124 cactggttaaacatatcataaaagggaattattaccataaaagaaaactatttttga--ttattataaattaattacacaatttcaatgtattaactatt 11115221  T
Q  101 actccataatttcctttttcatatcattaaccggtgcc 138  Q
    |    |||||||||||||| ||||| |||||| |||||    
T  11115222 a---tataatttccttttttatatccttaaccagtgcc 11115256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 961164 - 961051
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  |||||||| |||||||| ||||||||| |||||||||||| ||| |||||||||| || ||||||||||||||||       
T  961164 ggttaagcataccataaaagagaattattatcataaaaggaaattgtttctgactttattatcaattaattacacaattttaatgcattaactacta--- 961068  T
Q  105 cataatttcctttttca 121  Q
     ||||||||||||||||    
T  961067 tataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1840274 - 1840412
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||||||||||||  |||||||||||| |||| ||| ||||||| |||||||||||||| |||||||||| || ||| |||||| || |    
T  1840274 cactggttaaacatatcataaaagggaattattaccatgaaaggaaactgtttttaactttattataaattaattacacaattttaatacattaattatt 1840373  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggg 142  Q
    |    |||||||| ||||| ||||| |||||| |||| ||||    
T  1840374 a---tataatttctttttttatatccttaaccagtgctcggg 1840412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 5323548 - 5323439
Alignment:
Q  12 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatt 111  Q
    |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||| || || ||||| |||| |||||    ||||||    
T  5323548 cataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaattacataattttaatgctttaattacta---tataatt 5323452  T
Q  112 tcctttttcatat 124  Q
    |||||||| ||||    
T  5323451 tccttttttatat 5323439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 31280454 - 31280320
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||| ||||||| |||  ||||||||| ||||||||||| ||||| |||| |||||||||||||||||||    |||||||||||||||||        
T  31280454 aattattactataaaaggaaaccgtttttgacattattataaattaattatacaatttcaatgcattaactacta---tataatttcctttttcattctc 31280358  T
Q  127 ttaaccggtgcc-cgggagaatcggttagcatttccct 163  Q
    |||| | ||||| |||||| | ||||||||||||||||    
T  31280357 ttaatcagtgcctcgggagcaccggttagcatttccct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 9661144 - 9661011
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| |||| ||||| ||||||   ||||||||||||||||| ||| || |||| |||||||| ||||| ||||| |||| |||||||||||||||| ||    
T  9661144 actgattaaacatattataaaatggaattattaccataaaaggaaactgcttttaactttattttaaattaattatacaatttcaatgcattaactatta 9661045  T
Q  102 ctccataatttcctttttcatatcattaaccggtgcc 138  Q
         ||||||| ||||||||||| ||||| ||||||    
T  9661044 ---tgtaatttcttttttcatatccttaactggtgcc 9661011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 13529554 - 13529479
Alignment:
Q  61 tattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgccc 139  Q
    |||||||||| |||||||||| |||||||||||||||||||    |||||||||||||||| ||| |||||| ||||||    
T  13529554 tattataaattaattacacaatttcaatgcattaactacta---tataatttcctttttcacatccttaaccagtgccc 13529479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26387091 - 26387218
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  26387091 cactggttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 26387190  T
Q  101 actccataatttcctttttcatatcattaac 131  Q
    |    |||||||||||||||||||| |||||    
T  26387191 a---tataatttcctttttcatatccttaac 26387218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 31438805 - 31438646
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  31438805 cactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 31438706  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
         |||||||||||||||||||| |||||| ||| |||||||| | |||||||||||||||    
T  31438705 gt---ataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 34442559 - 34442719
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  34442559 cactggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 34442658  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 164  Q
    |    ||||| | |||||||||||| |||||  |||||| || | | |||||||||||||||||    
T  34442659 a---tataatcttctttttcatatccttaacatgtgccccggggcaccggttagcatttccctt 34442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22887909 - 22887749
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| || ||||||||||||||||||    
T  22887909 cactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttaactttattataaattaattacataatttcaatgcattaactact 22887810  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccct 163  Q
    |    |||||||| ||||||||||| ||||||  ||||| ||| | ||||||||||||||||||    
T  22887809 a---tataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 3668140 - 3668295
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||  ||||||| |||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  3668140 cactggttaaacatactataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 3668239  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcattt 159  Q
    |    ||||||||||||| |||| | |||||| ||| ||||| | | ||||||||||||    
T  3668240 a---tataatttccttttccatacccttaaccagtgtccgggggcaccggttagcattt 3668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 20553090 - 20552955
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||| ||||    
T  20553090 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattact 20552991  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||||||||||||||| |||||| ||||||    
T  20552990 a---tataatttcctttttcatatccttaaccagtgccc 20552955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 44588061 - 44587902
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||| ||||||| ||||||||||    
T  44588061 cacttgttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaattacacaatttcaatgtattaactact 44587962  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||| ||||| |||||||||| |||||| | | |||||||||||||||    
T  44587961 a---tataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 561546 - 561708
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| |||| |||| ||||||||  ||||||||  ||||||| ||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  561546 actgattaagcataccataaaagagaattattattataaaaggaaactgattttgactttattataaattaattacacaatttcaatgcattaactacta 561645  T
Q  102 ctccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 166  Q
        |||||||||||||||||||| |||||| ||| |||||| | | |||||||||||||||||||    
T  561646 ---tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 561708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27856423 - 27856584
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||| |    
T  27856423 cactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactatt 27856522  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    ||||||||||||||||||   |||||| ||| |||||| | | |||||| ||||||||||    
T  27856523 a---tataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctt 27856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 30486369 - 30486208
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||  | |||||||||| |||||| |||||||||||    
T  30486369 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagtttaattacacaatttcaatacattaactact 30486270  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||||| ||| |||||| | | | |||||||||||||||    
T  30486269 a---tataatttcctttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 30486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4381954 - 4381798
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  4381954 cactggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 4381855  T
Q  101 actccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcattt 159  Q
    |    |||||||||||||||||| | |||||| |||| ||||| | | ||||||||||||    
T  4381854 a---tataatttcctttttcatacccttaaccagtgcaccgggggcaccggttagcattt 4381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 43637305 - 43637165
Alignment:
Q  19 taaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttt 118  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    ||||||||||| |    
T  43637305 taaaaggaaattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgcattaactacta---tataatttccttat 43637209  T
Q  119 tcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
    ||||||| |||||| ||| |  || | | |||||||||||||||    
T  43637208 tcatatccttaaccagtgtctcggggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 5093566 - 5093693
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| |||| |||||||| ||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||| || |||||||||||||||    
T  5093566 cactagttaaacataccataaaaggaaattattatcataaaaggaaattgcttttgactttattataaattaattacacaattttaatgcattaactact 5093665  T
Q  101 actccataatttcctttttcatatcattaac 131  Q
    | |   ||||||||||||||||||| |||||    
T  5093666 att---taatttcctttttcatatccttaac 5093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 31390167 - 31390010
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| ||||||| || |||||| ||||||||||||       
T  31390167 ggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatacattaactacta--- 31390071  T
Q  105 cataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 164  Q
     |||||||||||||||||||| |||||  |||||| ||| | | | |||||||||||||||    
T  31390070 tataatttcctttttcatatccttaactagtgccccggaggcaccagttagcatttccctt 31390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 22567757 - 22567633
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||       
T  22567757 ggttaagcataccataaaagagaattattaccataaaaggaaattatttttgactttattataaattaattacacaatttcaatacattaactacta--- 22567661  T
Q  105 cataatttcctttttcatatcattaacc 132  Q
     |||||||| ||||||||||| ||||||    
T  22567660 tataatttcttttttcatatccttaacc 22567633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1859321 - 1859221
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  1859321 cactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactact 1859222  T
Q  101 a 101  Q
    |    
T  1859221 a 1859221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 6580348 - 6580213
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||| ||||||| || ||||||||||||||||||    
T  6580348 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacataatttcaatgcattaactact 6580249  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    ||| |||||||||||||| | |||||| ||||||    
T  6580248 a---tatagtttcctttttcatacccttaaccagtgccc 6580213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 32860260 - 32860126
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  32860260 cactggttaagcataccataaaagagaattattac-ataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaaatact 32860162  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||||||||| ||||| |||||| ||||||    
T  32860161 a---tataatttccttttttatatccttaacccgtgccc 32860126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8969434 - 8969572
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| ||||  ||||||| |||||||||||||||||| ||| || ||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  8969434 cactagttaagcatactataaaaggaaattattaccataaaaggaaactgcttttgactttattataaattaattacactatttcaatgcattaactact 8969533  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggg 142  Q
    |    ||||||| |||||||||||| |||||  |||||||||    
T  8969534 a---tataattttctttttcatatccttaactagtgcccggg 8969572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25782860 - 25782957
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  25782860 cactggttaagcataccataaaagggaattattatcataaaagaaaattgtttttgactttattataaaataattacacaatttcaatgcattaacta 25782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4022506 - 4022606
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||||||||||| ||||||||| |||||||| ||| ||||| |||||||||||||||| ||||||| || |||||| |||||||||||    
T  4022506 cactggttaaacatatcataaaaggaaattattatcataaaaggaaactgtttctgactttattataaattaattacagaatttcaatacattaactact 4022605  T
Q  101 a 101  Q
    |    
T  4022606 a 4022606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 22068347 - 22068481
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| ||||| |||| ||||||||| ||||||||    
T  22068347 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattatacaatttcaatgca-taactact 22068445  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||| ||||||||||||| |||||| ||||||    
T  22068446 a---tataattccctttttcatatccttaaccagtgccc 22068481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 38590904 - 38591062
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| || ||| |||||||||||       
T  38590904 tggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaattttaatacattaactactgt- 38591002  T
Q  104 ccataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccctt 164  Q
      |||||||||||||||||||  |||||| ||||||  | || | |||||||||||||||||    
T  38591003 --ataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttccctt 38591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 2898230 - 2898102
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||| |||| |||| ||||||||  ||||||||  ||| ||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  2898230 cactgattaaacataccataaaagagaattattatgatagaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 2898131  T
Q  101 actccataatttcctttttcatatcattaacc 132  Q
    |    ||||||| |||||||||||| ||||||    
T  2898130 a---tataattttctttttcatatccttaacc 2898102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 35851781 - 35851913
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||||||||||  ||| |||||||||||||||||| ||| |||||||  | |||||||||||||||| ||      
T  35851781 tggttaagcataccataaaagagaattattaccataaaatgaaactgtttttgactttattatcaattaattacattatttcaatgcattaactatta-- 35851878  T
Q  104 ccataatttcctttttcatatcattaaccggtgccc 139  Q
      |||||||||||||||| ||| |||||||||||||    
T  35851879 -tataatttcctttttcacatccttaaccggtgccc 35851913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 38296317 - 38296201
Alignment:
Q  20 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttccttttt 119  Q
    ||||| |||||||||||||||||  ||| |||||||||||||||||||||| |||||||||| ||||||| ||||| |||||    ||||||| ||||||    
T  38296317 aaaagaaaattattaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatgtattaattacta---tataattttcttttt 38296221  T
Q  120 catatcattaaccggtgccc 139  Q
    |||||| |||||| ||||||    
T  38296220 catatctttaaccagtgccc 38296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 13574060 - 13574150
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaa 95  Q
    |||||| |||| |||||||| |||||||||||||||||  ||| |||||||||||||||||||||| |||||||||| |||||| ||||||    
T  13574060 ggttaagcataccataaaaggaaattattaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatacattaa 13574150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 27584871 - 27584762
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||||||||||| ||| || |||||| |||||||||||| |||||||||| |||||||| ||||||||||    ||||||||| ||||||||||     
T  27584871 aattattaccataaaaggaaactgcttttgattttattataaattaattacacaatttcaatgctttaactacta---tataatttcccttttcatatcc 27584775  T
Q  127 ttaaccggtgccc 139  Q
    ||||||| |||||    
T  27584774 ttaaccgatgccc 27584762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 32360899 - 32361056
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| ||||| |  | |||||||||||||||| ||      
T  32360899 tggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattatattatttcaatgcattaactatta-- 32360996  T
Q  104 ccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
      ||||||| |||||||| ||| |||||| ||| |||||| | | ||||||||||||||||    
T  32360997 -tataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 26891722 - 26891850
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||| ||| | |||||||||||||||||||| |||||||||| |||||||||||||||| ||    |||||||||||||| ||||| |||| |    
T  26891722 taccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactaata---tataatttccttttttatatccttaatc 26891818  T
Q  133 ggtg-cccgggagaatcggttagcatttccct 163  Q
     ||| |||||| | | ||||||||||||||||    
T  26891819 agtgtcccgggggcaccggttagcatttccct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 11021260 - 11021375
Alignment:
Q  12 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatt 111  Q
    |||| ||||||||  ||||||||||| ||||| ||| ||||||||||||||||||| || |||||||||| ||||||||||||||||| |    ||||||    
T  11021260 cataccataaaagggaattattaccacaaaagaaaactgtttttgactttattatatattaattacacaatttcaatgcattaactacca---tataatt 11021356  T
Q  112 tcctttttcatatcattaa 130  Q
    || ||||||||||| ||||    
T  11021357 tcttttttcatatctttaa 11021375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 5881374 - 5881243
Alignment:
Q  7 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaact-actactcc 105  Q
    |||| |||| ||||||||  |||||||| |||||||| ||| | |||||||||||||||| ||| |||||||||| ||||||||||  | | ||||||      
T  5881374 ttaagcataccataaaagataattattatcataaaaggaaactctttttgactttattatcaattaattacacaatttcaatgcatgcattaactactat 5881275  T
Q  106 ataatttcctttttcatatcattaaccggtgc 137  Q
    |||||||||||||||||||| |||||| ||||    
T  5881274 ataatttcctttttcatatccttaacctgtgc 5881243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 28601125 - 28600991
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||  ||| ||||||| |||||||||| ||| ||||| |||| ||||||||||     |||    
T  28601125 cactggttaagcataccataaaagagaattattaccataaaaagaaactgtttttaactttattatcaattaattatacaatttcaatgcat----aact 28601030  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |||  |||||| ||||||||||||| |||||| ||||||    
T  28601029 actttataattccctttttcatatccttaaccagtgccc 28600991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 29102313 - 29102405
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaac 96  Q
    ||||||| |||||||||||||  ||||||||| ||||||| ||| |||||||||||||||||||||| ||||| | || ||||||| ||||||    
T  29102313 tggttaaacatatcataaaagataattattactataaaagaaaactgtttttgactttattataaattaattataaaatttcaatgtattaac 29102405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 15079011 - 15079085
Alignment:
Q  26 aaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||| |||||| ||||||||||||    
T  15079011 aaattattatcataaaaggaaattgtttttgacttt-ttataaattaattacacaatttcaatacattaactacta 15079085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 25772254 - 25772149
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    ||||||||  |||||||| |||||| | ||||| |||||||||||||||||||| |||||||||| |||| |||||||| || |  |  |||||||||||    
T  25772254 cataaaagggaattattatcataaagggaaattatttttgactttattataaattaattacacaatttcattgcattaattatt--tttataatttcctt 25772157  T
Q  117 tttcatat 124  Q
    ||||||||    
T  25772156 tttcatat 25772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 34123057 - 34123148
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    ||||| ||||| | ||||| ||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||||| ||||| ||||||||||    
T  34123057 gttaagcatattaaaaaagaaaattatgaccataaaaggaaactgtttttgacttt-ttataaattaattacacaaattcaaagcattaacta 34123148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39531981 - 39531883
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||||  ||||| |||| ||||||||||||| ||| || |||||||| | |||||||| |||||||||| ||||||||||||||||||    
T  39531981 cactggttaagcatatcgaaaaagaaaat-attaccataaaagaaaactggttttgactct-ttataaattaattacacaatttcaatgcattaactact 39531884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 15146789 - 15146694
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    ||||||||| |||| || ||| | ||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| |||| ||||||| ||||||||    
T  15146789 actggttaaacataccaaaaaggaaaattattatcataaaaggaaattatttttgacttt-ttataaattaattatacaatttcaatgtattaacta 15146694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 10820622 - 10820546
Alignment:
Q  20 aaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||| |||||||| ||||| ||||  |||||| ||||||||    
T  10820622 aaaagaaaattattaccataaaaggaaactgtttttaacttt-ttataaattaatta-acaatctcaatgtattaacta 10820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 4e-37; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 49529293 - 49529431
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  49529293 cactggttaaacataccataaaaggaaattattaccataaaaggaaaatgtttttgactttattataaattaattacataatttcaatgcattaactact 49529392  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    | |  ||||||| |||||||||||| |||| | ||||||    
T  49529393 agtatataattttctttttcatatccttaatcagtgccc 49529431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 42964276 - 42964411
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||||||||||||| ||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  42964276 cactggttaagcatatcataaaagtgaattattactataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 42964375  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    | |||||| ||||||||||| |||||| ||||||    
T  42964376 at---aaaatttcatttttcatatccttaaccagtgccc 42964411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 272373 - 272219
Alignment:
Q  7 ttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcca 106  Q
    |||| |||| ||||||||  ||||||||||||||||| ||| | |||||||||||||||||||| |||||||||| |||||||||||||||||||    |    
T  272373 ttaagcataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactacta---ta 272277  T
Q  107 taatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
    ||||||||||||||||||| |||||| ||| |||||| | | ||||||||||||||||    
T  272276 taatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 52520840 - 52520678
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  52520840 cactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 52520741  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttt 165  Q
    |    |||||||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||||    
T  52520740 a---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttt 52520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 49893490 - 49893330
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||| |||| |||| ||||||||  ||||||||||||||||| ||| ||||||||||||||||||| || |||||||||| |||||||||||||||| |    
T  49893490 cactgattaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagattaattacacaatttcaatgcattaactatt 49893391  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
    |    |||||||||||||||||||| |||||| ||| |||||| | | ||||||||||||||||    
T  49893390 a---tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 858744 - 858621
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||       
T  858744 ggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactacta--- 858648  T
Q  105 cataatttcctttttcatatcattaac 131  Q
     |||||||||||||||||||| |||||    
T  858647 tataatttcctttttcatatccttaac 858621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 43787030 - 43786871
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||   ||||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| ||||||||||||||||||    
T  43787030 cactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaactact 43786931  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 162  Q
    |    |||||||||||||||||| |||||||| |||||| ||| | | |||||||||||||||    
T  43786930 a---tataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 46352789 - 46352630
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| ||||| |||||||||||| ||| |||||||||| ||||||||||||||||||        
T  46352789 ggttaagcataccataaaagggaattattaccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactgt-- 46352692  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctttt 166  Q
     |||||||||||||||||||| |||||| ||| |||||| | | |||||||||||||||||||    
T  46352691 -ataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 46352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 48725430 - 48725295
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||| ||||    
T  48725430 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattact 48725331  T
Q  101 actccataatttcctttttcatatcattaaccggtgccc 139  Q
    |    |||||||||||||||||||| |||||| ||||||    
T  48725330 a---tataatttcctttttcatatccttaaccagtgccc 48725295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2505508 - 2505350
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||||||||||| ||| |||||||||| ||||||||| ||||||||    
T  2505508 cactggttaaacataccataaaagggaattattaccataaaaggaaactatttttgactttattatgaattaattacacaatttcaatgcactaactact 2505409  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||||||||| ||||||  || || |||| | |||||||||||||||    
T  2505408 a---tataatttcctttttcatatctttaaccaatgtccaggagcagcggttagcatttccc 2505350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 10617315 - 10617469
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||       
T  10617315 ggttaagcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaattacacaattttaatgcattaactacta--- 10617411  T
Q  105 cataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccc 162  Q
     |||||||||||||| ||||| |||| | ||| ||||| | | |||||| ||||||||    
T  10617412 tataatttccttttttatatccttaatcagtgtccgggggcaccggttaacatttccc 10617469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 41553967 - 41554100
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||| |||| |||||||   ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  41553967 cacttgttaagcataccataaaaaataattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 41554066  T
Q  101 actccataatttcctttttcatatcattaaccggtgc 137  Q
    |    |||||||||||||||||||| |||||| ||||    
T  41554067 a---tataatttcctttttcatatccttaaccagtgc 41554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 4168338 - 4168183
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||       
T  4168338 ggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatacattaactacta--- 4168242  T
Q  105 cataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccc 162  Q
     |||||||||||||| ||||| |||||| || ||| ||| | | |||||||||||||||    
T  4168241 tataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 39074577 - 39074419
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||| ||| ||||||||||| |||||||||| ||||||||||||||||||    
T  39074577 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaactact 39074479  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||||||| | |||||| ||| |||||| | | |||||||||||||||    
T  39074478 a---tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 38852372 - 38852246
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||| |||||||| |||||||  ||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||||||     
T  38852372 ggttaaacataccataaaagtgaattattatcataaaataaaactgtttttgactttattataaattaattacacaatttcaatgcattaattactacta 38852273  T
Q  105 cataatttcctttttcatatcattaac 131  Q
     |||||||| ||||| ||||| |||||    
T  38852272 tataatttcattttttatatccttaac 38852246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40362607 - 40362768
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| || |||||||||||||||    
T  40362607 cactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaattttaatgcattaactact 40362706  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccctt 164  Q
    |    |||||||| ||||||||||| |||| | |||||| ||| | |  ||||||||||||||||    
T  40362707 a---tataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 41304159 - 41304004
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| |||||||| |||||||||||||||||| ||| |||||||||||||||||| ||| ||||  |||| ||||||||||||| |||||      
T  41304159 tggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaatt--acaatttcaatgcattaattacta-- 41304064  T
Q  104 ccataatttcctttttcatatcattaaccggtgcccggga-gaatcggttagcatttccct 163  Q
      |||||||||||||||||||| ||||||  ||||| ||| | | ||||||||||||||||    
T  41304063 -tataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 42548254 - 42548128
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||  ||||| |||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  42548254 cactggttaagcataccataaaagggaattattaccataaaatgaaattatttttgactttattataaattaattacataatttcaatgcattaactact 42548155  T
Q  101 actccataatttcctttttcatatcattaa 130  Q
    |    |||||||| ||||||||||| ||||    
T  42548154 a---tataatttcttttttcatatctttaa 42548128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 2119563 - 2119456
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||    ||||||||||||||||||||     
T  2119563 aattattac-ataaaaggaaattgtttttgactttattataaattaattactcaatttcaatgcattaactacta---tataatttcctttttcatatct 2119468  T
Q  127 ttaaccggtgcc 138  Q
    |||||| |||||    
T  2119467 ttaaccagtgcc 2119456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6842778 - 6842681
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    |||||||||| |||| |||||| |  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  6842778 cactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaacta 6842681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 18014831 - 18014667
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||| |||| |||| |||||||| ||||||||| |||||||| ||| ||||||| |||||||||||  | |||||||||| ||||||||||||||||||    
T  18014831 cactgattaagcataccataaaaggaaattattatcataaaaggaaactgtttttaactttattatagtttaattacacaatttcaatgcattaactact 18014732  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttcccttttg 167  Q
    |    ||||||| |||||||||||| |||| | ||| |||||| | | | ||||||||||||||||||    
T  18014731 a---tataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttcccttttg 18014667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 2938072 - 2938195
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||| |||||| |||| ||||||||||||||        
T  2938072 gttaagcataccataaaagtgaattattaccataaaatgaaattgtttttgactttattataaattaatcacacaatttcagtgcattaactacta---t 2938168  T
Q  106 ataatttcctttttcatatcattaacc 132  Q
    ||||||| |||||| ||||| ||||||    
T  2938169 ataattttcttttttatatctttaacc 2938195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 20924151 - 20923992
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    ||||||||||  ||| ||||||||  |||||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| ||||||| ||||||||||    
T  20924151 cactggttaagtataccataaaagagaattattaccttaaaaggaaactgtttttgatattattataaattaattacacaatttcaatgaattaactact 20924052  T
Q  101 actccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccc 162  Q
    |    |||||||||||||||||| | |||||| ||| ||||| || | |||||||||||||||    
T  20924051 a---tataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 33141043 - 33140944
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| |||| |||||||||||||  ||||||||||||||||| ||| || ||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  33141043 actgattaagcatatcataaaagggaattattaccataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaactacta 33140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 50395591 - 50395688
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||| ||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||| ||| ||||||||||||||    
T  50395591 actgattaatcatatcataaaagagaattattaccataaaaggaaattg-ttttgactttattatcaattaattacacaatttctatgcattaactact 50395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 52246742 - 52246601
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaa-ttgtttttgactttattataaatgaattacacaagttcaatgcattaactac 99  Q
    |||| ||||| |||| |||||||| |||||||||| ||||||  ||| ||||||||||||||||||||||| ||||| |||| |||||||||||||| ||    
T  52246742 cactagttaagcataccataaaaggaaattattactataaaaaaaaaattgtttttgactttattataaattaattatacaatttcaatgcattaacaac 52246643  T
Q  100 tactccataatttcctttttcatatcattaaccggtgcccgggag 144  Q
    ||    |||||||| ||||||||||| |||||| |||||| ||||    
T  52246642 ta---tataatttcatttttcatatccttaaccagtgccccggag 52246601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 22249028 - 22248908
Alignment:
Q  18 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttccttt 117  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||| |||||| || |||||||||    ||||||||||||    
T  22249028 ataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatacaataactacta---tataatttccttt 22248932  T
Q  118 ttcatatcattaaccggtgcccgg 141  Q
    |||||||| |||||  ||||||||    
T  22248931 ttcatatccttaactagtgcccgg 22248908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 53489854 - 53489986
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| |||||||   |||||||| |||||||| ||| |||||||||| ||||||||||| |||||||||| || ||||||||||||||||      
T  53489854 tggttaagcataccataaaatagaattattatcataaaaggaaactgtttttgacattattataaattaattacacaattttaatgcattaactacta-- 53489951  T
Q  104 ccataatttcctttttcatatcattaaccggtgccc 139  Q
      |||||||||||||||||| | |||||| ||||||    
T  53489952 -tataatttcctttttcatacccttaaccagtgccc 53489986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 13160055 - 13159929
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| |||| |||| |||||||  ||||||||||| ||| || ||| |||||||||||||||||| ||| |||||||||| ||||||| |||||||||||    
T  13160055 actgattaagcataccataaaaagaaattattaccgtaatagaaaactgtttttgactttattatcaattaattacacaatttcaatgtattaactacta 13159956  T
Q  102 ctccataatttcctttttcatatcattaac 131  Q
        |||||||||||||||||||| |||||    
T  13159955 ---tataatttcctttttcatatccttaac 13159929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 28139452 - 28139340
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    ||||||||  ||||||||||||||||| ||  || ||||||||||||||||||| ||||| |||| ||||||||||||||||||| |   ||||||| ||    
T  28139452 cataaaagggaattattaccataaaaggaatctgcttttgactttattataaattaattatacaatttcaatgcattaactactatt---taatttcttt 28139356  T
Q  117 tttcatatcattaacc 132  Q
    ||||||||| ||||||    
T  28139355 tttcatatccttaacc 28139340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 50359213 - 50359313
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||| |||  ||||||||||| ||||| ||| ||||||||||||||||||| || |||||| ||| ||||||||||||||||||    
T  50359213 cactggttaagcataccatagaagataattattaccacaaaagaaaactgtttttgactttattatatattaattacccaatttcaatgcattaactact 50359312  T
Q  101 a 101  Q
    |    
T  50359313 a 50359313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 50298973 - 50299072
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||||||||  ||| ||||| ||| |||||||| |||||||  ||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  50298973 actggttaagtataccataagagtgaattattatcataaaaagaaactgtttttgactttattataaattaattacacaatttcagtgcattaactacta 50299072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 7468543 - 7468442
Alignment:
Q  28 attattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcat 127  Q
    ||||||| |||||||| ||| || ||||||||||||||||||| ||||| |||| |||||||||||||||||||    ||||||||||||||||| || |    
T  7468543 attattatcataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaactacta---tataatttcctttttcatttcct 7468447  T
Q  128 taacc 132  Q
    |||||    
T  7468446 taacc 7468442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 29241770 - 29241661
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatca 126  Q
    |||||||| |||||||  ||  |||||||||||||||||||||| ||||||| || |||||||||||||||||||    ||||||||| ||||||||||     
T  29241770 aattattatcataaaaagaatctgtttttgactttattataaattaattacataatttcaatgcattaactacta---tataatttccattttcatatcc 29241674  T
Q  127 ttaaccggtgccc 139  Q
    ||||| |||||||    
T  29241673 ttaactggtgccc 29241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 43269766 - 43269899
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||| |  ||||||||| ||||||| ||| ||| ||||| |||||||||||| ||||||| || ||||||||||||||||||    
T  43269766 cactggttaagcataccataaaggataattattactataaaaggaaactgtgtttgattttattataaattaattacataatttcaatgcattaactact 43269865  T
Q  101 actccataatttcctttttcatatcattaaccggtgc 137  Q
    |     |||||||| |||||||||| |||||| ||||    
T  43269866 a---tgtaatttcccttttcatatccttaaccagtgc 43269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 11308241 - 11308398
Alignment:
Q  4 tggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactact 103  Q
    ||||||| |||| |||||||| || ||||||||||||||| ||| | ||||||| |||||||| ||| |||||||  | |||||||||||||||| ||      
T  11308241 tggttaagcataccataaaaggaa-ttattaccataaaaggaaactatttttgattttattatcaattaattacattatttcaatgcattaactatta-- 11308337  T
Q  104 ccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
      |||||||||||||||| ||| |||| | ||| ||||| |  | |||||||||||||||||    
T  11308338 -tataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 31514932 - 31514850
Alignment:
Q  18 ataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||| |||||||||| ||||||  ||||||||||||| |||||||||||| |||||||||| || ||| ||||||||||||    
T  31514932 ataaaaggaaattattactataaaaa-aaattgtttttgattttattataaattaattacacaattttaatacattaactacta 31514850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 41993652 - 41993746
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||| |||| ||||||||  ||||||||  ||||||| ||| ||||||| |||||||||||||| ||||||| || |||||||||||||||||||    
T  41993652 gttaagcataccataaaagagaattattat-ataaaaggaaactgtttttaactttattataaattaattacataatttcaatgcattaactacta 41993746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 24488514 - 24488428
Alignment:
Q  12 catatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    |||||||||||||  ||||||||||||||||  ||| ||||||||| |||||||| ||| |||||||| | ||| ||||||||||||    
T  24488514 catatcataaaagagaattattaccataaaaagaaactgtttttgattttattatcaattaattacactatttccatgcattaacta 24488428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 52552632 - 52552553
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaa 81  Q
    ||||||||||  ||| ||||||||  ||||||||||||||||| | | |||||||||||||||||||||| ||||||||||    
T  52552632 cactggttaaatataccataaaagagaattattaccataaaag-atactgtttttgactttattataaattaattacacaa 52552553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 2362958 - 2362893
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaacta 98  Q
    ||||||||||| ||| ||||||||| |||||||| ||| |||||||| | ||||||||||||||||    
T  2362958 taccataaaagaaaactgtttttgattttattatcaattaattacactatttcaatgcattaacta 2362893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 52718252 - 52718166
Alignment:
Q  75 tacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccctt 164  Q
    ||||||| || |||| |||||||||||    |||||||||||||||||||| |||||| ||| ||||||| | || |||| |||||||||    
T  52718252 tacacaattttaatgtattaactactat---ataatttcctttttcatatccttaaccagtgtccgggagcaccgattagtatttccctt 52718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 53054913 - 53054834
Alignment:
Q  51 tttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaa 130  Q
    |||||| |||||||||| || ||||||||||  ||||||||||||  | ||||  |||||||| || |||||||||||||    
T  53054913 tttttggctttattatagataaattacacaatctcaatgcattaagaattactatataatttcattattcatatcattaa 53054834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 6842642 - 6842604
Alignment:
Q  61 tattataaatgaattacacaagttcaatgcattaactac 99  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  6842642 tattataaattaattacacaatttcaatgcattaactac 6842604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 2362858 - 2362801
Alignment:
Q  106 ataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccc 162  Q
    |||||||||||||||||||| ||||||  ||| ||||||| | |||||||||||||||    
T  2362858 ataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 23120 - 22959
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  |||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| ||||||| ||||| ||||    
T  23120 cactggttaaacataccataaaagagaattattaacataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaattact 23021  T
Q  101 actccataatttcctttttcatatcattaaccggtgc-ccgggagaatcggttagcatttccctt 164  Q
    |    |||||||||||||||||||| |||||| |||| ||||| | | |||||||||||||||||    
T  23020 a---tataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 984 - 857
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  984 cactggttaagcataccataaaagagaattattactataaaaggaaattgattttgactttattataaattaattacacaatttcaatgcattaactact 885  T
Q  101 actccataatttcctttttcatatcattaac 131  Q
    |    ||||||| |||||||||||| |||||    
T  884 a---tataattttctttttcatatccttaac 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 15055 - 14896
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||| || ||||||| |||| |||||||||||||    
T  15055 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaactacacaatttcagtgcattaactact 14956  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggaga-atcggttagcatttccc 162  Q
    |    |||||||| ||||| ||||| |||||| |||||| || || | |||||||||||||||    
T  14955 a---tataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 116359 - 116202
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  |||||||| |||||||| ||| ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||       
T  116359 ggttaaacataccataaaagggaattattatcataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta--- 116263  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
     |||||||||||||||||||| |||||| ||| |||||| | | |||||||||||| ||||    
T  116262 tataatttcctttttcatatctttaacctgtgccccgggggcaccggttagcattttcctt 116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 450 - 292
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| ||||||||||||||||||  |||||||||| || ||| ||| ||||||||||||||||||||||  ||||||||| |||||||||||||||| ||    
T  450 actgattaatcatatcataaaagagaattattaccgtagaaggaaactgtttttgactttattataaatttattacacaatttcaatgcattaactatta 351  T
Q  102 ctccataatttcctttttcatatcattaaccggtgcccgggagaatcggttagcatttccct 163  Q
        ||||||| |||||||||||  |||||| |||||| || | | ||||||| ||||||||    
T  350 ---tataattttctttttcatatgcttaaccagtgccctggggcaccggttaggatttccct 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10869 - 10771
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactac 99  Q
    |||||||||| |||| |||||| |  ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  10869 cactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac 10771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 41078 - 40945
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||||||||||| ||||||||| |||||||| ||| |||||||||||| ||||||||| ||||||| || |||||||||||||||| |    
T  41078 cactggttaagcatatcataaaaggaaattattatcataaaaggaaactgtttttgacttcattataaattaattacataatttcaatgcattaactatt 40979  T
Q  101 actccataatttcctttttcatatcattaaccggtgc 137  Q
    |    |||||||| ||||||||||  |||| ||||||    
T  40978 a---tataatttcatttttcatattcttaatcggtgc 40945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 832 - 704
Alignment:
Q  6 gttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactcc 105  Q
    ||||| |||| ||||||||  |||||| |||||||||| |||  ||||||||||||||||||||| |||||||||| ||||||| |||||||||||        
T  832 gttaagcataccataaaagagaattatcaccataaaagaaaacagtttttgactttattataaattaattacacaatttcaatggattaactacta---t 736  T
Q  106 ataatttcctttttcatatcattaaccggtgc 137  Q
    |||||||||||||||||||| |||||| ||||    
T  735 ataatttcctttttcatatctttaacccgtgc 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 50707 - 50567
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| ||||  |||||||  |||||||| |||||||| |||||| ||||||||||||||||||| ||||| |||| |||||  |||||||||||    
T  50707 cactggttaaacatactataaaagagaattattatcataaaagaaaattgattttgactttattataaattaattatacaatttcaaaacattaactact 50608  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgggag 144  Q
    |    |||||||||||||||||||| |||||| |||||| ||||    
T  50607 a---tataatttcctttttcatatctttaaccagtgccccggag 50567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 53416 - 53522
Alignment:
Q  44 taaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaaccggtgcccggga 143  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    |||||||||||||| ||||| |||||| ||| | ||||    
T  53416 taaattgtttttgactttattataaattaattatacaatttcaatgcattaactacta---tataatttccttttttatatccttaaccagtgtctggga 53512  T
Q  144 gaatcggtta 153  Q
    | | ||||||    
T  53513 gcaacggtta 53522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 53716 - 53872
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| | |||||||| |||| |||||| |||||||||| || ||||||||||||||||       
T  53716 ggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactacta--- 53812  T
Q  105 cataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccct 163  Q
     |||||||||||||||||| | |||||| ||| |||||| | | ||||||||||||||||    
T  53813 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 53872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 6141 - 6272
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||   |||||||||||||||| ||| |||||||||||||||||||| | |||||||||| | |||||||||||||||||       
T  6141 ggttaaacataccataaaaggggattattaccataaaaggaaactgtttttgactttattataatttaattacacaattccaatgcattaactacta--- 6237  T
Q  105 cataatttcctttttcatatcattaaccggtgccc 139  Q
     ||| |||||||||||||||| |||||| ||||||    
T  6238 tatagtttcctttttcatatccttaaccagtgccc 6272  T

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Target: scaffold0674 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 7956 - 8062
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||| ||| ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||    |||||||||||||||||||| ||||||    
T  7956 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 8052  T
Q  133 ggtgcccggg 142  Q
     |||||||||    
T  8053 agtgcccggg 8062  T

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Target: scaffold0549 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 7415 - 7309
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||| ||| ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||    |||||||||||||||||||| ||||||    
T  7415 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactacta---tataatttcctttttcatatccttaacc 7319  T
Q  133 ggtgcccggg 142  Q
     |||||||||    
T  7318 agtgcccggg 7309  T

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Target: scaffold0038 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 25861 - 25750
Alignment:
Q  17 cataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctt 116  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||    |||| ||||||    
T  25861 cataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattacta---tataa-ttcctt 25766  T
Q  117 tttcatatcattaacc 132  Q
    ||||||||| ||||||    
T  25765 tttcatatccttaacc 25750  T

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Target: scaffold0002 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 146933 - 147059
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    |||| |||| |||| |||||||  ||||||||||| ||| || ||| |||||||||||||||||| ||| |||||||||| ||||||| |||||||||||    
T  146933 actgattaagcataccataaaaagaaattattaccgtaatagaaaactgtttttgactttattatcaattaattacacaatttcaatgtattaactacta 147032  T
Q  102 ctccataatttcctttttcatatcattaac 131  Q
        |||||||||||||||||||| |||||    
T  147033 ---tataatttcctttttcatatccttaac 147059  T

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Target: scaffold0014 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 68318 - 68478
Alignment:
Q  2 actggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactacta 101  Q
    ||||||||| |||| ||||||||  |||||||||| |||||| ||| || |||| |||||||||||| | | |||||||| || ||||||||||||||||    
T  68318 actggttaagcataccataaaagggaattattaccttaaaaggaaactgattttaactttattataatttatttacacaattttaatgcattaactacta 68417  T
Q  102 ctccataatttcctttttcatatcattaaccggtg-cccgggagaatcggttagcatttccctt 164  Q
        |||||||| ||||||||||| |||||| ||| |||||| | | | |||||||||||||||    
T  68418 ---tataatttcatttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 68478  T

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Target: scaffold0263 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19612 - 19706
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaa 95  Q
    ||||| ||||||||||||||||||  || ||||| | |||||| ||| ||||||||||||||||||||||  ||||||||| |||||||||||||    
T  19612 cactgattaatcatatcataaaagagaactattatcgtaaaaggaaactgtttttgactttattataaattcattacacaatttcaatgcattaa 19706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 69384 - 69248
Alignment:
Q  1 cactggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactact 100  Q
    |||||||||| |||| |||||||| ||||||||||| |||||  ||| || ||||||||||||||||||| ||||||| || || |||| ||||||||||    
T  69384 cactggttaagcataccataaaag-aaattattaccttaaaaaaaaactgcttttgactttattataaattaattacataattttaatgtattaactact 69286  T
Q  101 actccataatttcctttttcatatcattaaccggtgcccgg 141  Q
    |    ||||||| |||||||||||| |||||  ||||||||    
T  69285 a---tataatttactttttcatatccttaacgagtgcccgg 69248  T

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Target: scaffold0325 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 17502 - 17658
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| |||||||   |||||||| |||||||| ||| |||||||||||||||||||||| |||| ||||| |||||||||||| ||||||       
T  17502 ggttaaacataccataaaaaggaattattatcataaaagaaaactgtttttgactttattataaattaatt-cacaatttcaatgcattagctacta--- 17597  T
Q  105 cataatttcctttttcatatcattaaccggtgcc-cgggagaatcggttagcatttccctttt 166  Q
     ||||||| ||||||||||||  ||| | ||||| ||||| |  |||||||||||||||||||    
T  17598 tataattttctttttcatatccgtaaacagtgcctcgggaca--cggttagcatttccctttt 17658  T

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Target: scaffold0206 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 11029 - 11155
Alignment:
Q  33 taccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactccataatttcctttttcatatcattaacc 132  Q
    ||||||||||  ||| |||||||||||||||||||  | |||||||||| |||||||||||||||| ||    |||||||||||||||||||| ||||||    
T  11029 taccataaaatgaaactgtttttgactttattatagtttaattacacaatttcaatgcattaactaata---tataatttcctttttcatatccttaacc 11125  T
Q  133 ggtgcccgggagaatcggttagcatttccct 163  Q
     ||| ||||| | | | ||||||||||||||    
T  11126 agtgtccggg-gcaccagttagcatttccct 11155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 95616 - 95772
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaactactactc 104  Q
    |||||| |||| ||||||||  ||||||||||||||||| ||| |||||| ||||||||||||||| ||||||| || |||||| |||||| || ||       
T  95616 ggttaaacataccataaaagggaattattaccataaaagaaaactgtttt-gactttattataaattaattacataatttcaattcattaattatta--- 95711  T
Q  105 cataatttcctttttcatatcattaaccggtgcc-cgggagaatcggttagcatttccctt 164  Q
     |||||||||||||||||||  |||||| || || |||| | | |||||||||||| ||||    
T  95712 tataatttcctttttcatattcttaaccagtacctcgggggcaccggttagcattttcctt 95772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 234008 - 233918
Alignment:
Q  5 ggttaatcatatcataaaagtaaattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaa 95  Q
    |||||| |||| |||||||| ||||||||  |||||||| ||| || ||||||||||||||||||| |||||||||| ||||||| |||||    
T  234008 ggttaaacataccataaaaggaaattattttcataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgaattaa 233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 74526 - 74594
Alignment:
Q  27 aattattaccataaaagtaaattgtttttgactttattataaatgaattacacaagttcaatgcattaa 95  Q
    ||||||||||||||||| || |||||||| | |||||||| ||| ||||| |||| |||| | ||||||    
T  74526 aattattaccataaaagaaatttgttttttaatttattatcaattaattatacaatttcactacattaa 74594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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