View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5865-Insertion-2 (Length: 580)

Name: NF5865-Insertion-2
Description: NF5865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5865-Insertion-2
NF5865-Insertion-2
[»] chr6 (31 HSPs)
chr6 (9-580)||(26848033-26848605)
chr6 (442-551)||(27666597-27666706)
chr6 (373-440)||(27668832-27668899)
chr6 (323-374)||(26811169-26811220)
chr6 (324-374)||(26861117-26861167)
chr6 (9-73)||(26949542-26949606)
chr6 (10-73)||(26959046-26959109)
chr6 (323-374)||(26974611-26974662)
chr6 (323-374)||(27310311-27310362)
chr6 (9-73)||(25071540-25071604)
chr6 (9-77)||(27214294-27214362)
chr6 (9-145)||(27234866-27234996)
chr6 (326-373)||(26635248-26635295)
chr6 (10-73)||(26635571-26635634)
chr6 (373-429)||(26660834-26660892)
chr6 (326-373)||(26741214-26741261)
chr6 (10-73)||(26741537-26741600)
chr6 (373-429)||(26766805-26766863)
chr6 (380-427)||(26809885-26809932)
chr6 (10-73)||(26974933-26974996)
chr6 (335-374)||(27317676-27317715)
chr6 (335-374)||(27581275-27581314)
chr6 (10-73)||(27665360-27665423)
chr6 (323-376)||(26616964-26617017)
chr6 (323-376)||(26722892-26722945)
chr6 (325-374)||(26958799-26958848)
chr6 (325-374)||(27667862-27667911)
chr6 (100-145)||(27214232-27214277)
chr6 (520-568)||(27611554-27611603)
chr6 (30-106)||(26811357-26811433)
chr6 (205-278)||(26974704-26974779)
[»] chr2 (1 HSPs)
chr2 (201-374)||(17994141-17994307)
[»] chr1 (1 HSPs)
chr1 (493-551)||(28165515-28165573)


Alignment Details
Target: chr6 (Bit Score: 521; Significance: 0; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 521; E-Value: 0
Query Start/End: Original strand, 9 - 580
Target Start/End: Complemental strand, 26848605 - 26848033
Alignment:
Q  9 attaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaattattggaggaagaggaagacaaagaggaagaagaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26848605 attaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaattattgcaggaagaggaagacaaagaggaagaagaa 26848506  T
Q  109 gaaggtgattgcacagccatgagaagaaatgatagtgttgtgttattctcggatctgttnnnnnnnnctgggaaggtagattatcagtgttgtgcattta 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  26848505 gaaggtgattgcacagccatgagaagaaatgatagtgttgtgttattctcggatctgttaaaaaaaactgggaaggtagattatcagtgttgtgcattta 26848406  T
Q  209 acattagtcacgaaacctccttctcatttttctctagccgtgtggaccagtcacaattattgtaccaccttgttttttctcccactataactttttgcta 308  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26848405 acattagtcacgaaacctccttctcattttcctctagccgtgtggaccagtcataattattgtaccaccttgttttttctcccactataactttttgcta 26848306  T
Q  309 aaacaatcaaattaatcaattattgctcaactttttctttagtgaaaatcattgcagaaccattatctatctttgttacttcatgagagtaaaataatag 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26848305 aaacaatcaaattaatcaattattgctcaactttttctttagtgaaaatcattgcagaaccattatctttctttgttacttcatgagagtaaaataatag 26848206  T
Q  409 tatatgaaataaaaataaatgttgttg-ttctgatggaaaaagaaaggttgagttaagggcatcacaatgaataaagagactaggtgatatttagaattt 507  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26848205 tatatgaaataaaaataaatgttgttgtttctgatggaaaaagaaaggttgagttaagggcatcacaatgaataaagagactaggtgatatttagaattt 26848106  T
Q  508 taggcctcgagtatcaaacagcttaataactaatgcatcaaaaaagcgtaatattctctctcccattttaggc 580  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26848105 taggcctcgagaatcaaacagcttaataactaatgcatcaaaaaagcgtaatattctctctcccattttaggc 26848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 442 - 551
Target Start/End: Original strand, 27666597 - 27666706
Alignment:
Q  442 tggaaaaagaaaggttgagttaagggcatcacaatgaataaagagactaggtgatatttagaattttaggcctcgagtatcaaacagcttaataactaat 541  Q
    ||||||||||||||||||||| | ||||||| |||||||  |||||||| ||||||||||||| || ||||||| |  ||||||||||||||| ||||||    
T  27666597 tggaaaaagaaaggttgagttgatggcatcagaatgaatcgagagactatgtgatatttagaacttcaggcctcaataatcaaacagcttaatcactaat 27666696  T
Q  542 gcatcaaaaa 551  Q
    |||| |||||    
T  27666697 gcataaaaaa 27666706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 373 - 440
Target Start/End: Original strand, 27668832 - 27668899
Alignment:
Q  373 atctatctttgttacttcatgagagtaaaataatagtatatgaaataaaaataaatgttgttgttctg 440  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  27668832 atctttctttgttacttcatgagagtaaaataacagtatatgaaataaaaataaatgtagttgttctg 27668899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 26811220 - 26811169
Alignment:
Q  323 atcaattattgctcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26811220 atcaattattgttcaactttttctttagtgaaaatcattgcagaaccattat 26811169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 374
Target Start/End: Complemental strand, 26861167 - 26861117
Alignment:
Q  324 tcaattattgctcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26861167 tcaattattgatcaactttttctttaatgaaaatcattgcagaaccattat 26861117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 26949606 - 26949542
Alignment:
Q  9 attaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaat 73  Q
    |||||| ||||||| ||||| ||||||||| || ||||||||||||||||||||| |||||||||    
T  26949606 attaccggtgaaaccgaatcgagtgtcggtacctctgaaactaatgaacacatcaaagttgaaat 26949542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 26959109 - 26959046
Alignment:
Q  10 ttaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaat 73  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| || || ||| ||||||    
T  26959109 ttaccggtgaaactgaatcgagtgtcggtgcccctgaaactaatgaagacgtcgtaggtgaaat 26959046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 26974662 - 26974611
Alignment:
Q  323 atcaattattgctcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  26974662 atcaattattgttcaactttttcttttgtgaaactcattgcagaaccattat 26974611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 374
Target Start/End: Original strand, 27310311 - 27310362
Alignment:
Q  323 atcaattattgctcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    ||||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  27310311 atcaattatcgttcaactttttctttagtgaaaatcattgaagaaccattat 27310362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 25071604 - 25071540
Alignment:
Q  9 attaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaat 73  Q
    |||||| || |||| ||||| ||||||||| |||||||||||||||||||| |||||| ||||||    
T  25071604 attaccggtaaaaccgaatcgagtgtcggtacccctgaaactaatgaacacgtcatagatgaaat 25071540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 27214362 - 27214294
Alignment:
Q  9 attaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaattatt 77  Q
    |||||| ||||||| |  || ||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  27214362 attaccggtgaaaccgtgtcgagtgtcggtacccctgaaactaatgaacacgtcatagctgaaattatt 27214294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 27234866 - 27234996
Alignment:
Q  9 attaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaattattggaggaagaggaagacaaagaggaagaagaa 108  Q
    |||||| ||||||| |  || ||||||||| |||||||||||||||||||| |||||| |||||||||| |||    |||  |   | || |||| ||||    
T  27234866 attaccggtgaaaccgtgtcgagtgtcggtacccctgaaactaatgaacacgtcatagctgaaattattagag----aggccgg--aggaagaagtagaa 27234959  T
Q  109 gaaggtgattgcacagccatgagaagaaatgatagtg 145  Q
    ||||||| ||||| |||||||||| ||||||||||||    
T  27234960 gaaggtggttgcatagccatgagaggaaatgatagtg 27234996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 373
Target Start/End: Complemental strand, 26635295 - 26635248
Alignment:
Q  326 aattattgctcaactttttctttagtgaaaatcattgcagaaccatta 373  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||||    
T  26635295 aattattgttcaactttttcttttgtgaaactcattgcagaaccatta 26635248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 26635634 - 26635571
Alignment:
Q  10 ttaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaat 73  Q
    ||||| ||||||| ||||  |||||||||||||||||||||||||||||| || ||| ||||||    
T  26635634 ttaccggtgaaaccgaattgagtgtcggtgcccctgaaactaatgaacacgtcgtaggtgaaat 26635571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 26660892 - 26660834
Alignment:
Q  373 atctatctttgttacttcatgagagtaaaataatag--tatatgaaataaaaataaatg 429  Q
    |||| |||||||||||||||||||||||||||| ||  ||||| |||||||||||||||    
T  26660892 atctttctttgttacttcatgagagtaaaataacagtatatataaaataaaaataaatg 26660834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 373
Target Start/End: Complemental strand, 26741261 - 26741214
Alignment:
Q  326 aattattgctcaactttttctttagtgaaaatcattgcagaaccatta 373  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||||    
T  26741261 aattattgttcaactttttcttttgtgaaactcattgcagaaccatta 26741214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 26741600 - 26741537
Alignment:
Q  10 ttaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaat 73  Q
    ||||| ||||||| ||||  |||||||||||||||||||||||||||||| || ||| ||||||    
T  26741600 ttaccggtgaaaccgaattgagtgtcggtgcccctgaaactaatgaacacgtcgtaggtgaaat 26741537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 26766863 - 26766805
Alignment:
Q  373 atctatctttgttacttcatgagagtaaaataatag--tatatgaaataaaaataaatg 429  Q
    |||| |||||||||||||||||||||||||||| ||  ||||| |||||||||||||||    
T  26766863 atctttctttgttacttcatgagagtaaaataacagtatatataaaataaaaataaatg 26766805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 26809932 - 26809885
Alignment:
Q  380 tttgttacttcatgagagtaaaataatagtatatgaaataaaaataaa 427  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  26809932 tttgttatttcattagagtaaaataatagtatatgaaatgaaaataaa 26809885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 26974996 - 26974933
Alignment:
Q  10 ttaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaat 73  Q
    ||||| ||||||| ||||| ||||||||| || ||||||||||||||||| |||||| ||||||    
T  26974996 ttaccggtgaaaccgaatcgagtgtcggtacctctgaaactaatgaacacgtcataggtgaaat 26974933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 27317676 - 27317715
Alignment:
Q  335 tcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  27317676 tcaactttttctttagtgaaaatcattgaagaaccattat 27317715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 27581275 - 27581314
Alignment:
Q  335 tcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  27581275 tcaactttttctttagtgaaaatcattgaagaaccattat 27581314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 27665360 - 27665423
Alignment:
Q  10 ttaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaacacatcatagttgaaat 73  Q
    ||||| |||||||  |||| ||||||||| |||||||||||||||||||||||  |||||||||    
T  27665360 ttaccggtgaaaccaaatcgagtgtcggtacccctgaaactaatgaacacatcgaagttgaaat 27665423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 26617017 - 26616964
Alignment:
Q  323 atcaattattgctcaactttttctttagtgaaaatcattgcagaaccattatct 376  Q
    ||||||||||| ||||||||| || | |||||||||| ||||||||||||||||    
T  26617017 atcaattattgttcaacttttactgtggtgaaaatcactgcagaaccattatct 26616964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 26722945 - 26722892
Alignment:
Q  323 atcaattattgctcaactttttctttagtgaaaatcattgcagaaccattatct 376  Q
    ||||||||||| ||||||||| || | |||||||||| ||||||||||||||||    
T  26722945 atcaattattgttcaacttttactgtggtgaaaatcactgcagaaccattatct 26722892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 26958848 - 26958799
Alignment:
Q  325 caattattgctcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    ||||||||| |||||||||||||| |||||| ||||| ||||||||||||    
T  26958848 caattattgttcaactttttcttttgtgaaactcattacagaaccattat 26958799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 27667862 - 27667911
Alignment:
Q  325 caattattgctcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    ||||||||| ||||||||||||||| |||||| || ||||||||||||||    
T  27667862 caattattgttcaactttttctttactgaaaaacactgcagaaccattat 27667911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 27214277 - 27214232
Alignment:
Q  100 gaagaagaagaaggtgattgcacagccatgagaagaaatgatagtg 145  Q
    |||| ||||||||||| ||||| |||||||||| ||||||||||||    
T  27214277 gaagtagaagaaggtggttgcatagccatgagaggaaatgatagtg 27214232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 27611554 - 27611603
Alignment:
Q  520 atcaaacagcttaataa-ctaatgcatcaaaaaagcgtaatattctctct 568  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||| |||||    
T  27611554 atcaaacagcttaataaactaatgcatcaaaagagcttaatattatctct 27611603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 26811433 - 26811357
Alignment:
Q  30 agtgtcggtgcccctgaaactaatgaacacatcatagttgaaattattggaggaagaggaagacaaagaggaagaag 106  Q
    ||||||| | |||||||||||||||||||| |||||| |||||| ||| |||   ||||| ||| | ||||||||||    
T  26811433 agtgtcgatacccctgaaactaatgaacacgtcatagatgaaatcattagagagggaggaggacgaggaggaagaag 26811357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 26974779 - 26974704
Alignment:
Q  205 tttaacattagtcacgaaacctccttctcatttttctctagccgtgtggaccagt--cacaattattgtaccacct 278  Q
    ||||||||||||  |||||| |||||| |||||| ||  | ||||||||||||||  |||||||||| ||||||||    
T  26974779 tttaacattagtagcgaaacttccttcacattttactacatccgtgtggaccagtcacacaattattttaccacct 26974704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 374
Target Start/End: Original strand, 17994141 - 17994307
Alignment:
Q  201 tgcatttaacattagtcacgaaacctccttctcatttttctctagccgtgtggaccagtcaca--attattgtaccaccttgttttttctcccactataa 298  Q
    |||||||||||| |||  |||||| ||||||||||| | || |||||||||||||||||||||  ||||||| || ||||  ||||| |||||||  | |    
T  17994141 tgcatttaacatcagtggcgaaacttccttctcattctcctatagccgtgtggaccagtcacacaattattgcactacctcatttttcctcccacagtca 17994240  T
Q  299 ctttttgctaaaacaatcaaattaatcaattattgctcaactttttctttagtgaaaatcattgcagaaccattat 374  Q
    ||||||||||||          | ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  17994241 ctttttgctaaag---------tcatcaattattgttcaactttttctttactgaaaatcattgcagaaccattat 17994307  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 551
Target Start/End: Original strand, 28165515 - 28165573
Alignment:
Q  493 tgatatttagaattttaggcctcgagtatcaaacagcttaataactaatgcatcaaaaa 551  Q
    |||||||||||||||||| ||||    |||||||| ||||||||| |||||||||||||    
T  28165515 tgatatttagaattttagacctcataaatcaaacaacttaataaccaatgcatcaaaaa 28165573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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