View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5866-Insertion-10 (Length: 171)
Name: NF5866-Insertion-10
Description: NF5866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5866-Insertion-10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 163; Significance: 2e-87; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 163; E-Value: 2e-87
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 38293334 - 38293172
Alignment:
| Q |
9 |
atatcatatatttgacaggttatgataagtagaatggcagcatgtaccatttccatgctagaagagtggaaaaagcaagctattgaaacaaaggagaaat |
108 |
Q |
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| T |
38293334 |
atatcatatatttgacaggttatgataagtagaatggcagcatgtaccatttccatgctagaagagtggaaaaagcaagctattgaaacaaaggagaaat |
38293235 |
T |
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| Q |
109 |
caaagaaaatagagatgactgaagaatttcgagagctaacagcaaatataattgcccacactg |
171 |
Q |
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| T |
38293234 |
caaagaaaatagagatgactgaagaatttcgagagctaacagcaaatataattgcccacactg |
38293172 |
T |
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