View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5866-Insertion-7 (Length: 379)
Name: NF5866-Insertion-7
Description: NF5866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5866-Insertion-7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 8 - 379
Target Start/End: Original strand, 38555649 - 38556020
Alignment:
| Q |
8 |
atatataattaggataagataccgaccaaacatcataattttgattgtctatatgaagctaaagatgcaactattgtttacaaagaaaacgtaatcctcc |
107 |
Q |
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| T |
38555649 |
atatataattaggataagataccgaccaaacatcataattttgattgtctatatgaagctaaagatgcaactattgtttacaaagaaaacgtaatcctcc |
38555748 |
T |
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| Q |
108 |
catctaattctatctcttctacggtgtaaaggtatgttggtcttttggacggccatgtatcatcgtcatttgtttaaaggacgaaatcgtcatgtttatt |
207 |
Q |
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| T |
38555749 |
catctaattttatctcttctacggtgtaaaggtatgttggtcttttggacggccatgtatcatcgtcatttgtttaaaggacgaaatcgtcatgtttatt |
38555848 |
T |
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| Q |
208 |
gtctgttatttgatgtctacattcatacaccattacggaattttggattattgattgatatcttaaacaagtttgttataccattcaaaacttaattatt |
307 |
Q |
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| T |
38555849 |
gtctgttatttgatgtctacattcatacaccattacggaattttggattattaattgatatcttaaacaagtttgttataccattcaaaacttaattatt |
38555948 |
T |
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| Q |
308 |
gttattttgagataacattacttaattaattagcaaaaaacatactatatttgttttttaattgcacttcat |
379 |
Q |
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| T |
38555949 |
attattttgagataacattacttaattaattagcaaaaaacatacgatatttgttttttaattgcacttcat |
38556020 |
T |
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