View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5866_high_70 (Length: 259)
Name: NF5866_high_70
Description: NF5866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5866_high_70 |
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Alignment Details
Target: chr3 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 10371368 - 10371498
Alignment:
| Q |
34 |
gtagaactggtggctattggaataatgtattttattgatcgcctctttttcaataaataatgtgaaaaagtgtttcaactgtgatattgtattcaggaaa |
133 |
Q |
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| T |
10371368 |
gtagaactggtggctattggaataatgtattttattgatcgcctctttttcaataaataatgtgaaaaagtgtttcaactgtgatattgtattcaggaaa |
10371467 |
T |
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| Q |
134 |
tcggaaatgagttgtgatccttgaaaaagtg |
164 |
Q |
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| T |
10371468 |
tcggaaatgagttgtgatccttgaaaaagtg |
10371498 |
T |
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