View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5867-Insertion-4 (Length: 249)
Name: NF5867-Insertion-4
Description: NF5867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5867-Insertion-4 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 249
Target Start/End: Original strand, 50532076 - 50532308
Alignment:
| Q |
9 |
taaagggcctgagcccactaggtatggcgattgggaacgcaatggtcgctgctctgatttttgatttattgcttactactttacaataaccaataccata |
108 |
Q |
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| T |
50532076 |
taaagggcctgagcccactaggtatggcgattgggaacgcaatggtcgctgctctgatttttgatttattgcttactactttacaataaccaataccata |
50532175 |
T |
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| Q |
109 |
gcataataaagttgtaagtcataaattgtgtacgtatttctcattcaaatttttaagaatcactgcgttttctcttggttctttattgcttatatgctta |
208 |
Q |
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| T |
50532176 |
acataataaagttgtaagtcataaattgtgtacgtatttctcattcaaatttttaagaatcactgcgtattctcttggttctttat--------tgctta |
50532267 |
T |
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| Q |
209 |
tatgtatgaaactgaggttgggtgaagttgaacagatcaac |
249 |
Q |
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| T |
50532268 |
tatgtatgaaactgaggttgggtgaagttgaacagatcaac |
50532308 |
T |
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