View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5868-Insertion-4 (Length: 706)

Name: NF5868-Insertion-4
Description: NF5868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5868-Insertion-4
NF5868-Insertion-4
[»] chr8 (66 HSPs)
chr8 (473-691)||(37752252-37752469)
chr8 (473-691)||(16929077-16929295)
chr8 (473-691)||(43246009-43246229)
chr8 (473-634)||(12281317-12281479)
chr8 (473-691)||(15155884-15156101)
chr8 (473-634)||(34313766-34313925)
chr8 (473-691)||(18019925-18020139)
chr8 (473-634)||(43162235-43162398)
chr8 (479-634)||(7127660-7127812)
chr8 (492-634)||(9465765-9465908)
chr8 (538-634)||(33748050-33748146)
chr8 (539-633)||(37670021-37670115)
chr8 (474-629)||(74688-74841)
chr8 (538-631)||(765930-766022)
chr8 (538-631)||(22787008-22787099)
chr8 (473-620)||(23123339-23123489)
chr8 (473-691)||(41662108-41662319)
chr8 (490-634)||(3463658-3463802)
chr8 (545-632)||(9930731-9930819)
chr8 (473-529)||(37752085-37752141)
chr8 (473-526)||(16928943-16928996)
chr8 (473-526)||(41662403-41662456)
chr8 (474-526)||(765736-765788)
chr8 (225-273)||(26105824-26105872)
chr8 (473-528)||(9823359-9823414)
chr8 (473-524)||(12281125-12281176)
chr8 (473-528)||(39724046-39724101)
chr8 (475-528)||(13027279-13027332)
chr8 (473-526)||(15156185-15156238)
chr8 (473-526)||(43245872-43245925)
chr8 (473-525)||(3463946-3463998)
chr8 (473-524)||(13026636-13026687)
chr8 (473-528)||(22851391-22851446)
chr8 (473-528)||(34498553-34498608)
chr8 (474-528)||(25438794-25438848)
chr8 (473-528)||(9822749-9822804)
chr8 (473-528)||(13936724-13936778)
chr8 (473-528)||(13937387-13937442)
chr8 (473-528)||(37396709-37396764)
chr8 (473-528)||(37397143-37397198)
chr8 (542-588)||(43598689-43598735)
chr8 (475-524)||(22786843-22786892)
chr8 (474-526)||(23123517-23123567)
chr8 (477-524)||(41662281-41662329)
chr8 (494-561)||(74949-75016)
chr8 (473-528)||(3307339-3307394)
chr8 (473-528)||(24473344-24473399)
chr8 (473-528)||(24473766-24473821)
chr8 (473-524)||(41662522-41662573)
chr8 (477-526)||(9465700-9465750)
chr8 (475-524)||(11007657-11007707)
chr8 (475-525)||(15042148-15042198)
chr8 (474-528)||(15442765-15442819)
chr8 (477-526)||(18019915-18019965)
chr8 (491-525)||(43598756-43598790)
chr8 (477-529)||(7127824-7127877)
chr8 (654-691)||(9465710-9465747)
chr8 (539-603)||(11007750-11007814)
chr8 (654-691)||(12281262-12281299)
chr8 (477-525)||(15156062-15156111)
chr8 (475-528)||(15444645-15444698)
chr8 (475-528)||(34498125-34498178)
chr8 (472-524)||(22851958-22852010)
chr8 (475-519)||(37669958-37670002)
chr8 (477-524)||(37752242-37752290)
chr8 (655-683)||(43162417-43162445)
[»] chr5 (50 HSPs)
chr5 (473-691)||(18433153-18433369)
chr5 (473-691)||(34577003-34577216)
chr5 (538-683)||(26020596-26020738)
chr5 (473-633)||(22428935-22429092)
chr5 (473-634)||(25175042-25175204)
chr5 (473-634)||(25115950-25116114)
chr5 (542-683)||(5779632-5779770)
chr5 (473-633)||(9665720-9665878)
chr5 (543-630)||(12441084-12441171)
chr5 (475-633)||(9869563-9869720)
chr5 (475-561)||(34576870-34576955)
chr5 (473-561)||(18433016-18433105)
chr5 (473-529)||(26020451-26020507)
chr5 (473-528)||(18817609-18817664)
chr5 (473-632)||(23011080-23011240)
chr5 (473-519)||(16466749-16466795)
chr5 (473-526)||(25115758-25115811)
chr5 (473-526)||(25174850-25174903)
chr5 (473-529)||(22429193-22429248)
chr5 (473-528)||(12498568-12498623)
chr5 (473-528)||(12498926-12498981)
chr5 (473-528)||(18816953-18817008)
chr5 (473-528)||(26571162-26571217)
chr5 (475-528)||(11351425-11351478)
chr5 (475-528)||(21207229-21207282)
chr5 (475-529)||(9665560-9665612)
chr5 (473-528)||(19514961-19515016)
chr5 (473-524)||(37780744-37780795)
chr5 (473-518)||(12441320-12441363)
chr5 (478-524)||(16726084-16726130)
chr5 (475-525)||(41382896-41382945)
chr5 (473-526)||(5187830-5187883)
chr5 (473-526)||(41383167-41383219)
chr5 (473-528)||(3888240-3888295)
chr5 (473-528)||(11350809-11350863)
chr5 (473-528)||(22729438-22729492)
chr5 (473-528)||(26570730-26570785)
chr5 (475-528)||(2817152-2817205)
chr5 (477-525)||(25115885-25115934)
chr5 (654-691)||(25115895-25115932)
chr5 (477-525)||(25174977-25175026)
chr5 (654-691)||(25174987-25175024)
chr5 (475-524)||(31569910-31569958)
chr5 (473-526)||(33324838-33324891)
chr5 (475-519)||(34576991-34577036)
chr5 (474-522)||(2817579-2817626)
chr5 (655-691)||(9665664-9665700)
chr5 (360-396)||(12434445-12434481)
chr5 (477-524)||(18433143-18433191)
chr5 (473-528)||(19514526-19514582)
[»] chr2 (57 HSPs)
chr2 (473-691)||(11883761-11883979)
chr2 (473-688)||(40469428-40469642)
chr2 (473-691)||(26737483-26737696)
chr2 (473-634)||(30191116-30191278)
chr2 (473-632)||(20347164-20347323)
chr2 (473-633)||(17345927-17346087)
chr2 (538-634)||(15321580-15321676)
chr2 (473-634)||(6171157-6171318)
chr2 (473-691)||(32672843-32673059)
chr2 (473-691)||(40221314-40221528)
chr2 (473-634)||(43495310-43495470)
chr2 (475-584)||(15920781-15920890)
chr2 (473-561)||(24832332-24832421)
chr2 (473-526)||(11883624-11883677)
chr2 (473-526)||(20347464-20347517)
chr2 (473-526)||(30190924-30190977)
chr2 (473-529)||(18296690-18296746)
chr2 (473-528)||(2639480-2639535)
chr2 (540-634)||(18055235-18055330)
chr2 (473-528)||(26841588-26841643)
chr2 (475-526)||(40469729-40469780)
chr2 (470-528)||(18296074-18296132)
chr2 (473-526)||(6171456-6171509)
chr2 (473-526)||(26737781-26737834)
chr2 (473-528)||(2638821-2638876)
chr2 (473-528)||(17850979-17851034)
chr2 (473-528)||(26842236-26842291)
chr2 (473-528)||(37720205-37720260)
chr2 (473-528)||(41790910-41790965)
chr2 (473-526)||(5378662-5378715)
chr2 (475-528)||(7591204-7591257)
chr2 (475-528)||(8851151-8851204)
chr2 (473-561)||(43495570-43495657)
chr2 (473-524)||(6495723-6495774)
chr2 (473-528)||(8851580-8851635)
chr2 (473-526)||(5379959-5380012)
chr2 (477-525)||(15920912-15920961)
chr2 (475-528)||(26692818-26692871)
chr2 (477-525)||(26737657-26737706)
chr2 (473-525)||(6495468-6495519)
chr2 (474-526)||(18055050-18055100)
chr2 (477-524)||(40469607-40469655)
chr2 (473-528)||(7664249-7664304)
chr2 (473-528)||(7664671-7664726)
chr2 (473-528)||(16910828-16910883)
chr2 (475-526)||(32673143-32673193)
chr2 (474-524)||(6325349-6325399)
chr2 (475-529)||(18055313-18055367)
chr2 (477-526)||(40221488-40221538)
chr2 (654-691)||(6171336-6171373)
chr2 (479-528)||(6324924-6324973)
chr2 (654-683)||(20347343-20347372)
chr2 (654-683)||(30191069-30191098)
chr2 (477-525)||(32673020-32673069)
chr2 (477-524)||(11883751-11883799)
chr2 (472-528)||(16911267-16911322)
chr2 (475-526)||(17345736-17345785)
[»] scaffold0319 (3 HSPs)
scaffold0319 (473-691)||(6395-6613)
scaffold0319 (473-526)||(6697-6749)
scaffold0319 (477-524)||(6575-6623)
[»] chr1 (56 HSPs)
chr1 (473-691)||(22149404-22149618)
chr1 (475-691)||(8108724-8108938)
chr1 (473-634)||(47955499-47955661)
chr1 (473-634)||(31848085-31848245)
chr1 (473-691)||(17518304-17518520)
chr1 (473-634)||(41083101-41083263)
chr1 (539-633)||(1176905-1176998)
chr1 (473-529)||(8108990-8109046)
chr1 (475-524)||(22149701-22149750)
chr1 (538-634)||(46057085-46057182)
chr1 (473-526)||(47955307-47955360)
chr1 (473-529)||(48190772-48190828)
chr1 (473-528)||(49284410-49284465)
chr1 (473-526)||(13589659-13589711)
chr1 (473-529)||(48191352-48191408)
chr1 (473-528)||(9347127-9347182)
chr1 (473-528)||(32163041-32163096)
chr1 (473-528)||(39691998-39692053)
chr1 (473-528)||(44911026-44911081)
chr1 (475-528)||(50430079-50430132)
chr1 (474-526)||(17518602-17518653)
chr1 (473-561)||(41082910-41082998)
chr1 (475-526)||(1177018-1177069)
chr1 (473-528)||(6002238-6002293)
chr1 (473-528)||(48105114-48105169)
chr1 (473-519)||(1176718-1176763)
chr1 (475-561)||(31847898-31847984)
chr1 (471-524)||(46056902-46056953)
chr1 (474-528)||(50526470-50526524)
chr1 (477-525)||(8108899-8108948)
chr1 (475-528)||(28634155-28634208)
chr1 (475-528)||(46823846-46823899)
chr1 (475-528)||(48104681-48104734)
chr1 (472-524)||(13918869-13918921)
chr1 (475-526)||(1176839-1176890)
chr1 (473-528)||(4692431-4692486)
chr1 (473-528)||(6703892-6703947)
chr1 (473-528)||(13918447-13918502)
chr1 (473-528)||(19008748-19008803)
chr1 (473-528)||(26814695-26814750)
chr1 (473-528)||(26815117-26815172)
chr1 (473-528)||(27172117-27172171)
chr1 (473-528)||(27172539-27172594)
chr1 (473-528)||(28633721-28633776)
chr1 (474-528)||(6002892-6002946)
chr1 (475-524)||(22149580-22149630)
chr1 (473-519)||(50615241-50615287)
chr1 (473-519)||(50623069-50623115)
chr1 (477-525)||(17518481-17518530)
chr1 (473-526)||(20371353-20371405)
chr1 (654-691)||(41083046-41083083)
chr1 (475-524)||(42611188-42611237)
chr1 (654-683)||(47955452-47955481)
chr1 (473-526)||(48313792-48313845)
chr1 (473-525)||(20480613-20480664)
chr1 (473-525)||(39690795-39690847)
[»] chr6 (39 HSPs)
chr6 (473-691)||(30388063-30388280)
chr6 (540-691)||(3403757-3403905)
chr6 (473-630)||(11656677-11656835)
chr6 (473-634)||(18241855-18242017)
chr6 (473-627)||(33971995-33972148)
chr6 (473-634)||(21032170-21032333)
chr6 (490-632)||(31598476-31598617)
chr6 (473-598)||(10039677-10039801)
chr6 (539-631)||(33658635-33658726)
chr6 (542-632)||(31598043-31598133)
chr6 (473-529)||(3403718-3403774)
chr6 (473-526)||(3403989-3404042)
chr6 (564-691)||(2762621-2762749)
chr6 (473-630)||(23250593-23250750)
chr6 (577-632)||(13579457-13579512)
chr6 (473-528)||(33828991-33829046)
chr6 (473-528)||(33829634-33829689)
chr6 (475-526)||(30388362-30388413)
chr6 (473-526)||(21031980-21032032)
chr6 (475-526)||(3825530-3825580)
chr6 (473-528)||(7654546-7654601)
chr6 (473-528)||(10087856-10087911)
chr6 (473-528)||(33974297-33974352)
chr6 (477-526)||(2762611-2762661)
chr6 (477-526)||(10039843-10039893)
chr6 (477-519)||(12714436-12714478)
chr6 (475-529)||(31598725-31598778)
chr6 (654-691)||(10039846-10039883)
chr6 (473-526)||(13579651-13579703)
chr6 (654-691)||(33972192-33972229)
chr6 (477-526)||(11656608-11656658)
chr6 (654-691)||(18242035-18242072)
chr6 (473-526)||(18242156-18242209)
chr6 (475-528)||(32733994-32734047)
chr6 (473-526)||(33655115-33655167)
chr6 (477-524)||(3403867-3403915)
chr6 (368-404)||(8798647-8798683)
chr6 (477-524)||(30388242-30388290)
chr6 (485-525)||(31598274-31598314)
[»] chr4 (67 HSPs)
chr4 (473-688)||(16555516-16555730)
chr4 (473-691)||(35393614-35393828)
chr4 (473-691)||(11241390-11241606)
chr4 (473-631)||(8488377-8488534)
chr4 (473-688)||(27304719-27304930)
chr4 (473-634)||(13198797-13198959)
chr4 (476-634)||(49178707-49178866)
chr4 (492-634)||(39415244-39415388)
chr4 (540-688)||(5206028-5206172)
chr4 (473-634)||(3930180-3930341)
chr4 (473-683)||(22681725-22681932)
chr4 (543-632)||(7603186-7603275)
chr4 (473-603)||(8182092-8182226)
chr4 (473-633)||(54508816-54508980)
chr4 (538-631)||(3844377-3844470)
chr4 (473-561)||(16555781-16555870)
chr4 (473-528)||(56505694-56505749)
chr4 (473-528)||(50678780-50678835)
chr4 (473-526)||(3930480-3930532)
chr4 (473-526)||(18077202-18077255)
chr4 (471-528)||(25161877-25161934)
chr4 (475-528)||(36096473-36096526)
chr4 (473-529)||(24775780-24775836)
chr4 (540-594)||(24775742-24775797)
chr4 (473-528)||(28196347-28196402)
chr4 (473-528)||(28196771-28196826)
chr4 (473-528)||(32703648-32703703)
chr4 (473-528)||(36095818-36095873)
chr4 (473-528)||(45830194-45830249)
chr4 (473-528)||(50679422-50679477)
chr4 (470-528)||(11529166-11529224)
chr4 (469-526)||(22681572-22681628)
chr4 (473-529)||(5205989-5206045)
chr4 (473-528)||(4239364-4239419)
chr4 (473-528)||(9023245-9023300)
chr4 (473-528)||(9023678-9023733)
chr4 (473-528)||(9380308-9380363)
chr4 (473-528)||(9380739-9380794)
chr4 (473-528)||(26207744-26207799)
chr4 (473-528)||(39744463-39744518)
chr4 (473-528)||(43051250-43051305)
chr4 (473-526)||(8181992-8182046)
chr4 (477-526)||(27304893-27304943)
chr4 (473-526)||(32703226-32703279)
chr4 (475-528)||(43050610-43050663)
chr4 (475-524)||(47219203-47219252)
chr4 (473-528)||(169014-169070)
chr4 (473-525)||(5206231-5206282)
chr4 (473-529)||(11241658-11241713)
chr4 (477-524)||(16555695-16555743)
chr4 (473-513)||(49178534-49178574)
chr4 (473-528)||(169437-169492)
chr4 (473-528)||(293215-293270)
chr4 (475-526)||(13198606-13198657)
chr4 (473-528)||(26207362-26207416)
chr4 (473-528)||(39744031-39744086)
chr4 (473-519)||(292783-292829)
chr4 (473-519)||(39415531-39415577)
chr4 (477-526)||(49178644-49178694)
chr4 (473-519)||(56506581-56506627)
chr4 (654-683)||(3930359-3930388)
chr4 (473-522)||(39912055-39912104)
chr4 (654-691)||(49178654-49178691)
chr4 (473-528)||(23539842-23539895)
chr4 (473-525)||(23540253-23540305)
chr4 (473-525)||(25225399-25225451)
chr4 (485-525)||(54509116-54509156)
[»] scaffold0001 (4 HSPs)
scaffold0001 (473-691)||(439036-439252)
scaffold0001 (538-634)||(183430-183526)
scaffold0001 (473-526)||(438931-438984)
scaffold0001 (473-518)||(183670-183715)
[»] scaffold0192 (3 HSPs)
scaffold0192 (538-691)||(25134-25285)
scaffold0192 (473-526)||(25369-25422)
scaffold0192 (477-524)||(25247-25295)
[»] chr3 (53 HSPs)
chr3 (473-691)||(9026870-9027085)
chr3 (473-634)||(10293800-10293962)
chr3 (473-691)||(18875027-18875244)
chr3 (473-634)||(20968719-20968881)
chr3 (473-634)||(17372299-17372461)
chr3 (538-634)||(3644599-3644695)
chr3 (473-632)||(45060597-45060756)
chr3 (473-634)||(47870824-47870983)
chr3 (490-634)||(26540760-26540905)
chr3 (538-629)||(13657513-13657603)
chr3 (473-678)||(42627395-42627598)
chr3 (474-630)||(1100917-1101070)
chr3 (473-561)||(20968984-20969072)
chr3 (473-525)||(45060872-45060924)
chr3 (542-634)||(17440954-17441046)
chr3 (473-526)||(47871122-47871174)
chr3 (477-525)||(18874887-18874935)
chr3 (473-528)||(48159898-48159953)
chr3 (473-525)||(1101182-1101234)
chr3 (473-525)||(1927773-1927825)
chr3 (473-529)||(3644780-3644836)
chr3 (473-528)||(40848522-40848576)
chr3 (473-528)||(40848959-40849014)
chr3 (473-528)||(47666333-47666388)
chr3 (473-528)||(48160331-48160386)
chr3 (473-528)||(53687889-53687944)
chr3 (475-529)||(14015961-14016014)
chr3 (475-528)||(1928432-1928484)
chr3 (476-525)||(4947263-4947312)
chr3 (542-634)||(14015765-14015856)
chr3 (475-528)||(27238898-27238951)
chr3 (473-525)||(8314014-8314066)
chr3 (477-524)||(18875017-18875065)
chr3 (473-525)||(22429159-22429211)
chr3 (473-525)||(53766580-53766632)
chr3 (477-519)||(9026860-9026903)
chr3 (472-526)||(17372594-17372646)
chr3 (475-526)||(23630035-23630086)
chr3 (473-528)||(36180988-36181043)
chr3 (473-528)||(42672979-42673033)
chr3 (538-632)||(4947452-4947545)
chr3 (473-523)||(17441066-17441116)
chr3 (473-519)||(42455791-42455837)
chr3 (473-526)||(10293609-10293662)
chr3 (654-691)||(10293745-10293782)
chr3 (477-525)||(20968897-20968946)
chr3 (654-691)||(20968899-20968936)
chr3 (473-529)||(21895658-21895715)
chr3 (475-526)||(3644720-3644772)
chr3 (473-525)||(8315083-8315134)
chr3 (475-526)||(13657621-13657673)
chr3 (473-513)||(13657735-13657775)
chr3 (473-525)||(27238466-27238518)
[»] chr7 (68 HSPs)
chr7 (542-691)||(13772683-13772831)
chr7 (473-634)||(9412024-9412186)
chr7 (473-634)||(3687354-3687518)
chr7 (539-634)||(6908280-6908375)
chr7 (474-630)||(29291808-29291965)
chr7 (473-633)||(23686611-23686770)
chr7 (538-634)||(5349527-5349623)
chr7 (538-634)||(15567056-15567152)
chr7 (538-634)||(27096233-27096329)
chr7 (538-634)||(27181974-27182070)
chr7 (540-631)||(33628582-33628674)
chr7 (473-561)||(3687621-3687709)
chr7 (552-633)||(34235759-34235840)
chr7 (544-634)||(35080023-35080112)
chr7 (538-683)||(38191405-38191548)
chr7 (473-526)||(9412325-9412378)
chr7 (473-526)||(13772901-13772954)
chr7 (543-608)||(18925128-18925193)
chr7 (473-529)||(13772642-13772698)
chr7 (473-528)||(44599490-44599545)
chr7 (473-528)||(44600133-44600188)
chr7 (469-519)||(5735249-5735299)
chr7 (539-633)||(5735438-5735533)
chr7 (473-528)||(9035291-9035346)
chr7 (473-528)||(10533035-10533090)
chr7 (473-528)||(13863314-13863369)
chr7 (473-528)||(37888834-37888889)
chr7 (473-528)||(37889257-37889312)
chr7 (473-528)||(37972394-37972449)
chr7 (473-518)||(13863964-13864009)
chr7 (475-528)||(20418891-20418944)
chr7 (477-529)||(33628657-33628709)
chr7 (473-528)||(8643764-8643819)
chr7 (473-528)||(17156968-17157023)
chr7 (473-528)||(20419322-20419377)
chr7 (473-528)||(22740157-22740212)
chr7 (473-528)||(29292923-29292978)
chr7 (473-529)||(5349730-5349783)
chr7 (475-525)||(6908485-6908534)
chr7 (473-519)||(18925063-18925109)
chr7 (473-519)||(27096048-27096093)
chr7 (473-519)||(27182210-27182255)
chr7 (473-519)||(42418592-42418638)
chr7 (473-526)||(3205093-3205146)
chr7 (473-526)||(8953889-8953941)
chr7 (473-526)||(9034868-9034921)
chr7 (475-528)||(18863970-18864023)
chr7 (472-528)||(18925320-18925374)
chr7 (473-526)||(29292041-29292094)
chr7 (475-519)||(5735554-5735598)
chr7 (473-525)||(6908214-6908265)
chr7 (473-525)||(23686422-23686473)
chr7 (474-526)||(34235978-34236030)
chr7 (473-525)||(35079961-35080012)
chr7 (473-528)||(13741558-13741613)
chr7 (475-506)||(15567291-15567322)
chr7 (473-528)||(29293344-29293399)
chr7 (473-528)||(37971961-37972016)
chr7 (473-528)||(46816309-46816364)
chr7 (654-688)||(6908393-6908427)
chr7 (472-518)||(39983699-39983745)
chr7 (477-525)||(6908391-6908440)
chr7 (654-691)||(9412204-9412241)
chr7 (654-691)||(18925232-18925269)
chr7 (473-528)||(3204670-3204723)
chr7 (475-526)||(23686544-23686596)
chr7 (475-519)||(38191265-38191309)
chr7 (473-525)||(38191566-38191618)
[»] scaffold0802 (3 HSPs)
scaffold0802 (473-691)||(1119-1336)
scaffold0802 (473-526)||(1420-1473)
scaffold0802 (477-525)||(1297-1346)
[»] scaffold0015 (1 HSPs)
scaffold0015 (473-631)||(17049-17208)
[»] scaffold0110 (3 HSPs)
scaffold0110 (473-632)||(45538-45697)
scaffold0110 (473-526)||(45807-45859)
scaffold0110 (654-683)||(45686-45715)
[»] scaffold0009 (1 HSPs)
scaffold0009 (473-631)||(205688-205844)
[»] scaffold0598 (2 HSPs)
scaffold0598 (474-630)||(6609-6763)
scaffold0598 (472-513)||(6888-6928)
[»] scaffold1221 (3 HSPs)
scaffold1221 (475-634)||(1674-1834)
scaffold1221 (654-683)||(1627-1656)
scaffold1221 (473-529)||(1512-1567)
[»] scaffold0433 (1 HSPs)
scaffold0433 (538-631)||(10690-10783)
[»] scaffold0328 (2 HSPs)
scaffold0328 (473-528)||(6153-6208)
scaffold0328 (473-528)||(6793-6848)
[»] scaffold0376 (3 HSPs)
scaffold0376 (540-631)||(7494-7585)
scaffold0376 (473-529)||(7456-7511)
scaffold0376 (473-519)||(7607-7652)
[»] scaffold0041 (1 HSPs)
scaffold0041 (473-528)||(38693-38748)
[»] scaffold0017 (1 HSPs)
scaffold0017 (473-528)||(185272-185327)
[»] scaffold0535 (1 HSPs)
scaffold0535 (473-519)||(10013-10059)
[»] scaffold0029 (1 HSPs)
scaffold0029 (473-526)||(9906-9959)
[»] scaffold0035 (1 HSPs)
scaffold0035 (472-524)||(72966-73018)
[»] scaffold0460 (1 HSPs)
scaffold0460 (473-528)||(331-386)
[»] scaffold0069 (1 HSPs)
scaffold0069 (473-526)||(50507-50559)
[»] scaffold0002 (2 HSPs)
scaffold0002 (473-526)||(411924-411976)
scaffold0002 (477-517)||(412049-412090)


Alignment Details
Target: chr8 (Bit Score: 128; Significance: 8e-66; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 37752469 - 37752252
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||        ||||||||||||||||||| |||| ||||||||||    
T  37752469 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatattttgtcaattgtgt 37752370  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||| |||||||||||||||||||    
T  37752369 tttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc-aaaaaaaaagaagagaaggtgcaaaatcgcacaatta 37752271  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  37752270 gcaaaaagataaggggcaa 37752252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 16929295 - 16929077
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||        || ||||||||||||||||||||| ||||||||||    
T  16929295 gcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctcttttttttgaacgattttgcaccccatcttttgtcaattgtgt 16929196  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||          |||||||| |||||||||| ||||||||    
T  16929195 tttgttcaaaatcatcattaaaagagaggaaaatggactaaagatagggtgcaaaatcgctcaaaaaaaaaagaagagaaggtgcaaaatctcacaatta 16929096  T
Q  673 gcaaaaagatatggggcaa 691  Q
     |||||||||| |||||||    
T  16929095 acaaaaagataaggggcaa 16929077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 43246229 - 43246009
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn--gagcgattttgcaccccatcttttatcaattgt 570  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||          |||||||||||||||||||||||| ||||||||    
T  43246229 gcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctcttttttttttgagcgattttgcaccccatcttttgtcaattgt 43246130  T
Q  571 gttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaat 670  Q
    |||||||||||||||||| |||||| | ||||||||||| |||| ||||||||||||||| |||          |||||||| |||||||||||||||||    
T  43246129 gttttgttcaaaatcatcattaaaaaaaaggaaaagggggtaaaaatagggtgcaaaatccctcaaaaaaaaaagaagagaaggtgcaaaatcgcacaat 43246030  T
Q  671 tagcaaaaagatatggggcaa 691  Q
    ||||||||||||| |||||||    
T  43246029 tagcaaaaagataaggggcaa 43246009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 12281479 - 12281317
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||         |||||||||| ||||| ||||||| |||| ||||    
T  12281479 gcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatcttttgtcaactgtg 12281380  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  12281379 ttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctc 12281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 15155884 - 15156101
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  15155884 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtg 15155983  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| | ||||||||||||||           ||| ||  ||||||||||||||||||    
T  15155984 ttttgttcaaaatcatcactaaaagaggggaaaaggggcaaaagatggagtgcaaaatcgctcaaaaaatat--aagtgagggtgcaaaatcgcacaatt 15156081  T
Q  672 agcaaaaagatatggggcaa 691  Q
    |||||||||||| |||||||    
T  15156082 agcaaaaagataaggggcaa 15156101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 34313766 - 34313925
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||| |||||| ||        |||||||||||||||| |||||||   || |||||    
T  34313766 gcttaattgcacttttcccc--tatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccctatcttttgcaaactgtgt 34313863  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  34313864 tttgttcaaaattatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctc 34313925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 18020139 - 18019925
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||||||| |||  ||||||||| ||||||||||||||| |||||| ||        ||||||||||||||||||||||||  ||| || ||    
T  18020139 gcttaattgcacttttaccc--tatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatcttttggcaactgcgt 18020042  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    ||||||||||||| || ||||||||  ||||||||||| |||||| ||||||||||||||||          ||||||   |||||||||||||||||||    
T  18020041 tttgttcaaaatcgtcattaaaagaagggaaaaggggcaaaagatggggtgcaaaatcgctc--aaaaagaagaagagggggtgcaaaatcgcacaatta 18019944  T
Q  673 gcaaaaagatatggggcaa 691  Q
    | ||||||||| |||||||    
T  18019943 ggaaaaagatagggggcaa 18019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 43162235 - 43162398
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn---gagcgattttgcaccccatcttttatcaattg 569  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||| |||| | ||           |||||||||||||||| ||||||| |||||||    
T  43162235 gcttaattgcacttttccccc-tatattttgttaattgtgcgattttgcacctcctctttttttttttgagcgattttgcaccctatcttttgtcaattg 43162333  T
Q  570 tgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||||  |||||||||||||||    
T  43162334 tgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatgaggtgcaaaatcgctc 43162398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 479 - 634
Target Start/End: Original strand, 7127660 - 7127812
Alignment:
Q  479 ttgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgttttgtt 578  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||  |         |||||||||||||| |||||||| ||||||||||||||||    
T  7127660 ttgcacttttccccc-tatcttttgctaattgtgcgattttgcatccc--cttttttcttagcgattttgcacctcatcttttgtcaattgtgttttgtt 7127756  T
Q  579 caaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
     ||||||||| ||||||||| |||||| |||| |||||| ||||||||||||||||    
T  7127757 aaaaatcatcattaaaagaggggaaaatgggcaaaagatggggtgcaaaatcgctc 7127812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 492 - 634
Target Start/End: Complemental strand, 9465908 - 9465765
Alignment:
Q  492 ccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgt 590  Q
    |||||||||||| ||||||||||||||| |||||| ||         |||| |||||||||||||| ||||  ||||||||||||||||||||||||| |    
T  9465908 ccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcaattttgcaccccattttttgccaattgtgttttgttcaaaatcatcat 9465809  T
Q  591 taaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||| ||||||||||| ||||||  |||||||||||||||    
T  9465808 taaaagaggggaaaaggggcaaaagatgaggtgcaaaatcgctc 9465765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 538 - 634
Target Start/End: Original strand, 33748050 - 33748146
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||  ||||||||||||||| || ||||| |||||||||| ||||||||    
T  33748050 gagcgattttgcaccctatcttttgccaattgtgttttgttcaaaatcatcactaaaagagaggaaaatggactaaatatagggtgcagaatcgctc 33748146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 539 - 633
Target Start/End: Original strand, 37670021 - 37670115
Alignment:
Q  539 agcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||| ||| ||||| |||||| |||| ||||||||||    
T  37670021 agcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcattattaaaagagagaaaatggggcaaaagattgggtacaaaatcgct 37670115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 474 - 629
Target Start/End: Original strand, 74688 - 74841
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgtt 573  Q
    |||||||||||||||||| || |||||||||||||||||||||||| |||||| |          |||||||||||||| ||||||||   |||||||||    
T  74688 cttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcaccccttttttttttt-agcgattttgcacctcatcttttgctaattgtgtt 74785  T
Q  574 ttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaat 629  Q
    ||||||||||||||| ||||||||| ||||| | ||| ||| || |||||||||||    
T  74786 ttgttcaaaatcatcattaaaagaggggaaatgaggcaaaaaatggggtgcaaaat 74841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 538 - 631
Target Start/End: Complemental strand, 766022 - 765930
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    |||||||||||||||| |||||||  ||| ||||||||||||||||||||| ||||||||| |||||| |||  ||||||||||||||||||||    
T  766022 gagcgattttgcaccctatcttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatggg-aaaagatagggtgcaaaatcg 765930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 538 - 631
Target Start/End: Complemental strand, 22787099 - 22787008
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||| ||||||||| || |||||||| |||||| |||||||||||||    
T  22787099 gagcgattttgcacctcatctttttccaattgtgttttgttcaaaatcatcattaaaagag-gggaaaggggcaaaagat-gggtgcaaaatcg 22787008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 23123339 - 23123489
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc---nnnnnnnngagcgattttgcaccccatcttttatcaattg 569  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||            || ||||||||| ||||||||||  ||||||    
T  23123339 gcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccatcttttttttttttagtgattttgca-cccatcttttgccaattg 23123437  T
Q  570 tg-ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagg 620  Q
    || ||||||||||||||||| ||||||||| ||||||||||| |||| ||||    
T  23123438 tgtttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaaggtagg 23123489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 41662108 - 41662319
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnnga-gcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||||| ||| |||| ||||||||| ||||||||||||||| |||||| ||         | |||||||||||||  |||||||  ||| ||||    
T  41662108 gcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctctttttttttaagcgattttgcaccatatcttttgccaactgtg 41662207  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    |||||||||      || ||||||||| ||||||||||| |||||||||||||||||||||||           ||| ||| ||| ||||||||||||||    
T  41662208 ttttgttca------tcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatat--aagtgaaggtgtaaaatcgcacaatt 41662299  T
Q  672 agcaaaaagatatggggcaa 691  Q
    |||||||||||| |||||||    
T  41662300 agcaaaaagataaggggcaa 41662319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 634
Target Start/End: Original strand, 3463658 - 3463802
Alignment:
Q  490 ccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcg 589  Q
    |||||||||||||| ||||||||| ||||| |||||||           ||||||||| |||| ||||||||  |||||| |||||||| |||||||||     
T  3463658 ccccctatcttttgttaattgtgcaattttgcaccccaattttttttttagcgattttacacctcatcttttgccaattgagttttgtttaaaatcatca 3463757  T
Q  590 ttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||| || ||||| |||||| ||||||||||| ||||    
T  3463758 ttaaaagagaggtaagggggcaaaagatggggtgcaaaattgctc 3463802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 545 - 632
Target Start/End: Complemental strand, 9930819 - 9930731
Alignment:
Q  545 tttgcaccccatcttttatcaattgtgtttt-gttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||| ||||||||| ||||| ||||| ||||||  |||||||||||||    
T  9930819 tttgcaccccatattttgtcaattgtgtttttgttcaaaatcatcattaaaagaggggaaagggggcaaaagatgaggtgcaaaatcgc 9930731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 37752085 - 37752141
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  37752085 gcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccatc 37752141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 16928943 - 16928996
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  16928943 gcttaattgcactttccccccctatcttttgctaattgtgcgattttgcacccc 16928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 41662456 - 41662403
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  41662456 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 41662403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 474 - 526
Target Start/End: Original strand, 765736 - 765788
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 26105824 - 26105872
Alignment:
Q  225 tatttttacatgaacacaaatataaatgcataatatttggtcacacaca 273  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26105824 tatttttacatggacacaaatataaatgcataatatttggtcacacaca 26105872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 9823414 - 9823359
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  9823414 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 9823359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 12281125 - 12281176
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  12281125 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 12281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 39724101 - 39724046
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  39724101 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 39724046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 13027332 - 13027279
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 13027279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 15156238 - 15156185
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  15156238 gcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacccc 15156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 43245872 - 43245925
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  43245872 gcttaattgcactttttccccctatcttttgataattgtgcgattttgcacccc 43245925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 3463998 - 3463946
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || |||||    
T  3463998 gcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 13026636 - 13026687
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  13026636 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 22851391 - 22851446
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||    
T  22851391 gcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccat 22851446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 34498608 - 34498553
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  34498608 gcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccat 34498553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 528
Target Start/End: Original strand, 25438794 - 25438848
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 25438848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 9822749 - 9822804
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| ||||||||||||   |||||||||||||| ||||||||    
T  9822749 gcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccat 9822804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 13936724 - 13936778
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||| ||||||||    
T  13936724 gcttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcaccccat 13936778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 13937442 - 13937387
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||||||| |||||  |||||||||| ||| ||||||||    
T  13937442 gcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccat 13937387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 37396709 - 37396764
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  |||||  ||||||||||||| ||||||||    
T  37396709 gcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccat 37396764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 37397198 - 37397143
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| | ||||||    
T  37397198 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccat 37397143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 588
Target Start/End: Complemental strand, 43598735 - 43598689
Alignment:
Q  542 gattttgcaccccatcttttatcaattgtgttttgttcaaaatcatc 588  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  43598735 gattttgcaccacattttttgtcaattgtgttttgttcaaaatcatc 43598689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 524
Target Start/End: Original strand, 22786843 - 22786892
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||| ||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 526
Target Start/End: Complemental strand, 23123567 - 23123517
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||| ||||||    
T  23123567 cttaattgcacttt--ccccttatcttttgctaattgtgcgattttgcacccc 23123517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 41662329 - 41662281
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  41662329 aattgcacttttgccccttatctttttgctaattgtgcgattttacacc 41662281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 561
Target Start/End: Complemental strand, 75016 - 74949
Alignment:
Q  494 ctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatctttt 561  Q
    |||||||||||||||||||||||||| |||||| ||         |||||||||||||||||||||||    
T  75016 ctatcttttgctaattgtgcgattttgcaccccctctttttttttagcgattttgcaccccatctttt 74949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 3307339 - 3307394
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| ||||| |||||||||||||  |||||||||||||| || |||||    
T  3307339 gcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccat 3307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 24473344 - 24473399
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||||||||  ||||| ||||||| |||||| ||||||||    
T  24473344 gcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccat 24473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 24473821 - 24473766
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||  ||||||  ||||| |||||||||||||| ||||||||    
T  24473821 gcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccat 24473766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 41662522 - 41662573
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||| ||||    
T  41662522 gcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 526
Target Start/End: Original strand, 9465700 - 9465750
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||| ||||||    
T  9465700 aattgcacttttgccccctatctttttgctaactgtgcgattttgcacccc 9465750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 524
Target Start/End: Original strand, 11007657 - 11007707
Alignment:
Q  475 ttaattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||||| | ||||||||||| || |||||||||||||||||||    
T  11007657 ttaattgcacttttgctccctatctttttgccaattgtgcgattttacacc 11007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 525
Target Start/End: Original strand, 15042148 - 15042198
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||| ||||| |||||||||| ||||||| |||||| |||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccc 15042198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 528
Target Start/End: Original strand, 15442765 - 15442819
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||| ||||||||||||| ||| || ||||||| |||||| ||||||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccat 15442819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 526
Target Start/End: Original strand, 18019915 - 18019965
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||| ||||||||| |||| |||||||||||||||| ||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcacccc 18019965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 525
Target Start/End: Complemental strand, 43598790 - 43598756
Alignment:
Q  491 cccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||||||||||||||| |||||    
T  43598790 cccctatcttttgctaattgtgcgattttgcaccc 43598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 529
Target Start/End: Complemental strand, 7127877 - 7127824
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||| ||||||||| |||||||||||| | |||||| |||||||||    
T  7127877 aattgcacttttaccccctatctttttgctaattgcgtgattttgcaccccatc 7127824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 9465747 - 9465710
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  9465747 gtgcaaaatcgcacagttagcaaaaagatagggggcaa 9465710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 603
Target Start/End: Complemental strand, 11007814 - 11007750
Alignment:
Q  539 agcgattttgcaccccatcttttatcaattgtgtttt-gttcaaaatcatcgttaaaagagaggaa 603  Q
    ||||||||||||||| || ||||  |||||||||||| ||||||||||||| ||||||||| ||||    
T  11007814 agcgattttgcaccc-attttttgccaattgtgtttttgttcaaaatcatcattaaaagaggggaa 11007750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 12281299 - 12281262
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  12281299 gtgcaaaatcgcacagttagcaaaaagataaggggcaa 12281262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 15156111 - 15156062
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| |||||    
T  15156111 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 15444698 - 15444645
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||| ||||||||  ||| | |||||||||||||| ||||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccat 15444645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 34498125 - 34498178
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||| ||||||||  ||||  |||||||||||||| ||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccat 34498178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 472 - 524
Target Start/End: Complemental strand, 22852010 - 22851958
Alignment:
Q  472 agcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    |||||||||| | |||||  ||||||||||||| |||||||||||||| ||||    
T  22852010 agcttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 37669958 - 37670002
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||| || ||||||||| ||||||||| |||||    
T  37669958 ttaattgcacttttcctccttatcttttgttaattgtgcaatttt 37670002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 37752242 - 37752290
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  37752242 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 655 - 683
Target Start/End: Original strand, 43162417 - 43162445
Alignment:
Q  655 tgcaaaatcgcacaattagcaaaaagata 683  Q
    |||||||||||||||||||||||||||||    
T  43162417 tgcaaaatcgcacaattagcaaaaagata 43162445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 8e-66; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 18433369 - 18433153
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||        |||||||||||||||||||||||| ||||||||||    
T  18433369 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatcttttgtcaattgtgt 18433270  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||          |||||||| |||||||||||||||||||    
T  18433269 tttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgtaaaatcgctc--aaaaaaaagaagagaaggtgcaaaatcgcacaatta 18433172  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  18433171 gcaaaaagataaggggcaa 18433153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 34577216 - 34577003
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||| |||||||||        |||||||||||||||||||||||| ||||||||||    
T  34577216 gcttaattgcactttttcccc-tatcttttgctaattgtgtgattttgcaccccatcttttttttgagcgattttgcaccccatcttttgtcaattgtgt 34577118  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||           ||||||||||||||||||||||||||||    
T  34577117 tttgttcaaaatcatcattaaaagagaggaaaa-gggctaaagatagggtgcaaaatcgct---aaaaaaatgaagagaatgtgcaaaatcgcacaatta 34577022  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  34577021 gcaaaaagataaggggcaa 34577003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 538 - 683
Target Start/End: Complemental strand, 26020738 - 26020596
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnn 637  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       
T  26020738 gagcgattttgcaactcatcttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc--- 26020642  T
Q  638 nnnnnnngaagagaatgtgcaaaatcgcacaattagcaaaaagata 683  Q
           |||||||||||||||||||||||||||| ||||||||||    
T  26020641 aaaaaaagaagagaatgtgcaaaatcgcacaattaacaaaaagata 26020596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 473 - 633
Target Start/End: Original strand, 22428935 - 22429092
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||        |||| |||||||||||||||||||  |||||||||    
T  22428935 gcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccatcttttttt-gagcaattttgcaccccatcttttgccaattgtgt 22429032  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    |||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||    
T  22429033 tttgttcaaaatcatcattaaaagagagg-gaaggggctacagatagggtgcaaaatcgct 22429092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 25175204 - 25175042
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  25175204 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtg 25175105  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  25175104 ttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctc 25175042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 25116114 - 25115950
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccca--tcnnnnnnnn-gagcgattttgcaccccatcttttatcaattg 569  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||   ||         |||||||||||||||| |||||||  ||| ||    
T  25116114 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccccttctttttttttgagcgattttgcaccctatcttttgccaactg 25116015  T
Q  570 tgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  25116014 tgttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctc 25115950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 542 - 683
Target Start/End: Original strand, 5779632 - 5779770
Alignment:
Q  542 gattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnn 641  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||           
T  5779632 gattttgcacctcatcttttgacaattgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgcaaaatcgctcaaaagaa 5779731  T
Q  642 nnngaagagaatgtgcaaaatcgcacaattagcaaaaagata 683  Q
       |||||||   |||||||||||||||||||||||||||||    
T  5779732 gaagaagaga---tgcaaaatcgcacaattagcaaaaagata 5779770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 473 - 633
Target Start/End: Complemental strand, 9665878 - 9665720
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||| |||||  |         ||||||||||||||||||||||||   ||||||||    
T  9665878 gcttaattccacttttccccc-tatcttttgctaattgtgc-attttgcacccactattttttttgagcgattttgcaccccatcttttgcaaattgtgt 9665781  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    ||||||||||||||   ||||||||| |||||| |||| |||||| |||||||||||||||    
T  9665780 tttgttcaaaatcaatattaaaagaggggaaaaagggcaaaagatggggtgcaaaatcgct 9665720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 543 - 630
Target Start/End: Original strand, 12441084 - 12441171
Alignment:
Q  543 attttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatc 630  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| ||||||  ||| |||||| ||||||||||||    
T  12441084 attttgcacctcatcttttgtcaattgtgttttgttcaaaatcatcattaaaagaggggaaaaccggcaaaagatggggtgcaaaatc 12441171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 475 - 633
Target Start/End: Original strand, 9869563 - 9869720
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttat--caattgtgt 572  Q
    |||||||||||||||| ||||||  |||||||||||||||||||| |||||  |         ||||||||||||||||| | ||||    |||||||||    
T  9869563 ttaattgcacttttcctccctat--tttgctaattgtgcgattttgcacccact-ttttttttgagcgattttgcaccccttttttttggccaattgtgt 9869659  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    |||||||||||||||||||||||||| ||||| ||||| || ||| |||||||||||||||    
T  9869660 tttgttcaaaatcatcgttaaaagaggggaaagggggcaaatgatggggtgcaaaatcgct 9869720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 475 - 561
Target Start/End: Original strand, 34576870 - 34576955
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatctttt 561  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  34576870 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttacaccccatcttttttttgagcgattttgcaccccatctttt 34576955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 561
Target Start/End: Original strand, 18433016 - 18433105
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc-nnnnnnnngagcgattttgcaccccatctttt 561  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         ||||||||||||||||||||||||    
T  18433016 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttt 18433105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 26020451 - 26020507
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  26020451 gcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatc 26020507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 18817664 - 18817609
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  18817664 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 18817609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 632
Target Start/End: Original strand, 23011080 - 23011240
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc--catcnnnnnnnngagcgattttgcaccccatctttta-tcaattg 569  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||| |||||  |||         ||| ||||||||||||||| ||||  |||| ||    
T  23011080 gcttaattgcatttttcccct-tatcttttgctaattgtgcgattttgcacccaccattttttttttgagagattttgcaccccatttttttgtcaaatg 23011178  T
Q  570 tgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    ||||||| ||||||||||| ||||||||| |||||   ||| |||||| ||||||||||||||    
T  23011179 tgttttgctcaaaatcatcattaaaagaggggaaagatggcaaaagat-gggtgcaaaatcgc 23011240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 519
Target Start/End: Complemental strand, 16466795 - 16466749
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  16466795 gcttaattgcacttttcccccctatattttgctaattgtgcgatttt 16466749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 25115758 - 25115811
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  25115758 gcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacccc 25115811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 25174850 - 25174903
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  25174850 gcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacccc 25174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 473 - 529
Target Start/End: Complemental strand, 22429248 - 22429193
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  22429248 gcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcaccccatc 22429193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 12498568 - 12498623
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  12498568 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 12498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 12498981 - 12498926
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  12498981 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 12498926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 18816953 - 18817008
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||    
T  18816953 gcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccat 18817008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 26571217 - 26571162
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  26571217 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 26571162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 11351478 - 11351425
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||| | |||||||||||| |||||||||||||| ||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccat 11351425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 21207229 - 21207282
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 21207282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 475 - 529
Target Start/End: Original strand, 9665560 - 9665612
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||    
T  9665560 ttaattgcacttttcccc--tatcttttgctaattgtgcaattttgcaccccatc 9665612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 19515016 - 19514961
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  19515016 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 19514961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 524
Target Start/End: Complemental strand, 37780795 - 37780744
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||| ||||    
T  37780795 gcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacc 37780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 518
Target Start/End: Complemental strand, 12441363 - 12441320
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattt 518  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  12441363 gcttaattgcacttttcccc--tatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 16726084 - 16726130
Alignment:
Q  478 attgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    ||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 525
Target Start/End: Original strand, 41382896 - 41382945
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  41382896 ttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 5187883 - 5187830
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||| |||| ||||||||| ||||||||| ||||| ||||||    
T  5187883 gcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcacccc 5187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 41383219 - 41383167
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||||    
T  41383219 gcttaattgaacttttccccc-tattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 3888240 - 3888295
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||| ||||||||||||  ||||| |||||| ||||||| ||||||||    
T  3888240 gcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccat 3888295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 11350809 - 11350863
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||||    
T  11350809 gcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccat 11350863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 22729492 - 22729438
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||| ||||||||    
T  22729492 gcttaattgcacttttccccc-tataatttgccaattgtgcgattttgcaccccat 22729438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 26570730 - 26570785
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||| ||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  26570730 gcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 26570785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 2817152 - 2817205
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||| || |||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccat 2817205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 25115885 - 25115934
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| |||||    
T  25115885 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 25115932 - 25115895
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  25115932 gtgcaaaatcgcacaattagcaaaatgataaggggcaa 25115895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 25174977 - 25175026
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| |||||    
T  25174977 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 25175024 - 25174987
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  25175024 gtgcaaaatcgcacaattagcaaaatgataaggggcaa 25174987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 524
Target Start/End: Original strand, 31569910 - 31569958
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    |||||||||||||||||| ||||||||||  |||||||||||||| ||||    
T  31569910 ttaattgcacttttcccc-ctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 33324891 - 33324838
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||  |||||||||||||  ||||||| |||||| ||||||    
T  33324891 gcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacccc 33324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 34576991 - 34577036
Alignment:
Q  475 ttaattgcacttttcccccctatctttt-gctaattgtgcgatttt 519  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgatttt 34577036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 2817626 - 2817579
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttaca 522  Q
    |||||||||||||||||||| |||  ||||| |||||||||||||||||    
T  2817626 cttaattgcacttttccccc-tatagtttgcgaattgtgcgattttaca 2817579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 655 - 691
Target Start/End: Complemental strand, 9665700 - 9665664
Alignment:
Q  655 tgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    |||| |||||||||||||||||||||||| |||||||    
T  9665700 tgcagaatcgcacaattagcaaaaagatagggggcaa 9665664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 12434481 - 12434445
Alignment:
Q  360 gcctaaatactatacatttatatttgtgactatgata 396  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  12434481 gcctaaacactatacatttatatttgtgaccatgata 12434445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 18433143 - 18433191
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  18433143 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 19514526 - 19514582
Alignment:
Q  473 gcttaattgcacttttcccccc-tatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||| |||||| |||  ||||| |||||||||||||| ||||||||    
T  19514526 gcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccat 19514582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 5e-64; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 11883979 - 11883761
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||         |||||||||||||| ||||||||| |||||||||    
T  11883979 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcactccatcttttgtcaattgtg 11883880  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||||    
T  11883879 ttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc-aaaaaaaaagaagagaaggtgcaaaatcgcacaatt 11883781  T
Q  672 agcaaaaagatatggggcaa 691  Q
    |||||||||||| |||||||    
T  11883780 agcaaaaagataaggggcaa 11883761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 473 - 688
Target Start/End: Original strand, 40469428 - 40469642
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||||| |||||| ||         |||||||||||||||| ||||||| |||||||||    
T  40469428 gcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgtcaattgtg 40469527  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||||    
T  40469528 ttttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctc--aaaaaaaagaagagaaggtgcaaaatcgcacaatt 40469625  T
Q  672 agcaaaaagatatgggg 688  Q
    ||||||| |||| ||||    
T  40469626 agcaaaacgataagggg 40469642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 26737483 - 26737696
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||| |||||| ||         | ||||||||||||||||||||| ||||||||||    
T  26737483 gcttaattgcacttttctcc--tatcttttgctaattgtgcgattttgcaccccctctttttttttaacgattttgcaccccatcttttgtcaattgtgt 26737580  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||||||||||||| ||||||||||  |||| |||||||| |||||||||||||||||||          |||| ||  |||||||||||||||||||    
T  26737581 tttgttcaaaatcatcattaaaagaga-aaaaatgggctaaacatagggtgcaaaatcgctc--aaaaaaaagaagggagggtgcaaaatcgcacaatta 26737677  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  26737678 gcaaaaagatagggggcaa 26737696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 30191278 - 30191116
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  30191278 gcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtg 30191179  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  30191178 ttttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatagggtgcaaaatcgctc 30191116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 473 - 632
Target Start/End: Original strand, 20347164 - 20347323
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||| ||||||           |||||||||||||||| |||||||  ||| |||||    
T  20347164 gcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 20347263  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||    
T  20347264 tttgttcaaaatcatcgttaaaagaggggaaatggggcaaaagatggggtgcaaaatcgc 20347323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 633
Target Start/End: Complemental strand, 17346087 - 17345927
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||||||||| ||   ||||||||||||||||||||||||| |||| | ||         ||||||||||||| ||||| ||||  ||||||||    
T  17346087 gcttaattgcactttttcctt-tatcttttgctaattgtgcgattttgcacctcctctttatttttgagcgattttgcatcccatattttgccaattgtg 17345989  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  17345988 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagataaggtgcaaaatcgct 17345927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 538 - 634
Target Start/End: Complemental strand, 15321676 - 15321580
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | ||| | |||| ||||||||||||||||    
T  15321676 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcattaaaagaggggaaatgaggcaagagatggggtgcaaaatcgctc 15321580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 6171157 - 6171318
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||   |          ||| |||||||||||| |||||||  ||| ||||    
T  6171157 gcttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcaccttttttttttttttgagtgattttgcaccctatcttttgccaactgtg 6171255  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  6171256 ttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctc 6171318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 32672843 - 32673059
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||   || ||||||||| ||||||||||||||| |||||  ||         |||||||||||||||| |||||||  ||| ||||    
T  32672843 gcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccctctctttttttttgagcgattttgcaccctatcttttgccaactgtg 32672942  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||           ||| ||  ||||||||||||||||||    
T  32672943 ttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaat-gctcaaaaaatat--aagtgagggtgcaaaatcgcacaatt 32673039  T
Q  672 agcaaaaagatatggggcaa 691  Q
    |||||||||||| |||||||    
T  32673040 agcaaaaagataaggggcaa 32673059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 40221314 - 40221528
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcacccc-atcttttatcaattgtg 571  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||| |||| | ||         ||| |||||||||||| ||||||| |||||||||    
T  40221314 gcttaattgcacctttccccc-tatcttttgctaattgttcgattttgcacctc-tctttttttttagcaattttgcacccccatcttttgtcaattgtg 40221411  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||| ||||||||||||| ||||||||| || |||||||| ||||||  |||||||||||||||          |||| |   ||||||||||||||||||    
T  40221412 tttcgttcaaaatcatcattaaaagagggggaaaggggcaaaagatgaggtgcaaaatcgctcaaaaaaagaagaaggg---gtgcaaaatcgcacaatt 40221508  T
Q  672 agcaaaaagatatggggcaa 691  Q
    |||||||||||| |||||||    
T  40221509 agcaaaaagatagggggcaa 40221528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 43495310 - 43495470
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| || ||| ||         |||||||||||||| ||| ||||  |||||||||    
T  43495310 gcttaattgcacttttcccacctatattttgctaattgtgcgatttttcatcccctctttttttt-agcgattttgcacctcatattttgccaattgtgt 43495408  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||||||| ||||||||| ||||  ||||| || ||| ||||||||||| ||||    
T  43495409 tttgttcaaaatcatcattaaaagaggggaaggggggcaaatgatggggtgcaaaattgctc 43495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 584
Target Start/End: Original strand, 15920781 - 15920890
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgttt 574  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||| |||||| ||        |||| |||||||||||||||||||  |||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctcttttttttgagcaattttgcaccccatcttttgccaattgtgttt 15920880  T
Q  575 tgttcaaaat 584  Q
    ||||||||||    
T  15920881 tgttcaaaat 15920890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 561
Target Start/End: Original strand, 24832332 - 24832421
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc-nnnnnnnngagcgattttgcaccccatctttt 561  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         ||||||||||||||||||||||||    
T  24832332 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttt 24832421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 11883624 - 11883677
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11883624 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 11883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 20347517 - 20347464
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  20347517 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20347464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 30190924 - 30190977
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  30190924 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 30190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 473 - 529
Target Start/End: Complemental strand, 18296746 - 18296690
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  18296746 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatc 18296690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 2639535 - 2639480
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  2639535 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 2639480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 634
Target Start/End: Complemental strand, 18055330 - 18055235
Alignment:
Q  540 gcgattttgcaccccatcttttatcaattgtgttt-tgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||||||||  ||||||||||| | |||||||||||| ||||||||| |||||  || | |||||| || |||||||||||||    
T  18055330 gcgattttgcaccccatcttttgccaattgtgtttgtcttcaaaatcatcattaaaagaggggaaataggtcgaaagatgggatgcaaaatcgctc 18055235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 26841588 - 26841643
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  26841588 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 26841643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 40469780 - 40469729
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcacccc 40469729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 18296074 - 18296132
Alignment:
Q  470 ttagcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||||||| ||||||||    
T  18296074 ttagcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccat 18296132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 6171509 - 6171456
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  6171509 gcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 26737834 - 26737781
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  26737834 gcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 2638821 - 2638876
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||    
T  2638821 gcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccat 2638876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 17850979 - 17851034
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  17850979 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 17851034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 26842291 - 26842236
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  26842291 gcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 26842236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 37720205 - 37720260
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  37720205 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 37720260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 41790965 - 41790910
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| | ||||||    
T  41790965 gcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccat 41790910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 5378662 - 5378715
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  5378662 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 7591204 - 7591257
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||| ||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccat 7591257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 8851151 - 8851204
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 8851204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 561
Target Start/End: Complemental strand, 43495657 - 43495570
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatctttt 561  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||| || ||| ||        ||||||||||||||||||||||||    
T  43495657 gcttaattgcacttt-cccacctatattttgctaattgtgcgattttgcatcccctcttttttttgagcgattttgcaccccatctttt 43495570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 524
Target Start/End: Complemental strand, 6495774 - 6495723
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||| ||||    
T  6495774 gcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 8851635 - 8851580
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  8851635 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 8851580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 5380012 - 5379959
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||  ||| | |||||||||||||| ||||||    
T  5380012 gcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 15920961 - 15920912
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacaccc 525  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  15920961 aattgcacttttgccccctaactttttgctaattgtgcgattttacaccc 15920912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 26692871 - 26692818
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||| ||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccat 26692818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacaccc 525  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||| |||||    
T  6495468 gcttaattgcacttttcctccctatc-tttgttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 526
Target Start/End: Original strand, 18055050 - 18055100
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  18055050 cttaattgcacttttccccc-ta-cttttgctaattgtgcgattttgcacccc 18055100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacacc 524  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 7664249 - 7664304
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  |||   |||||||||||||| ||||||||    
T  7664249 gcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccat 7664304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 7664726 - 7664671
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||| ||||||  ||||  |||||||||||||| ||||||||    
T  7664726 gcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccat 7664671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 16910828 - 16910883
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||| | |  ||||| |||||||||||||| ||||||||    
T  16910828 gcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccat 16910883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 32673193 - 32673143
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||| |||| |||||||||| |||||||||||||| ||||||    
T  32673193 ttaattgcactttttcccc-tatcttttgccaattgtgcgattttgcacccc 32673143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 524
Target Start/End: Complemental strand, 6325399 - 6325349
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    |||||||||||||||||||| |||  ||||| |||||||||||||| ||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 6325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 529
Target Start/End: Complemental strand, 18055367 - 18055313
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||| ||| ||| ||||||  |||||||||||||| |||||||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttgcaccccatc 18055313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 526
Target Start/End: Complemental strand, 40221538 - 40221488
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacccc 526  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  40221538 aattgcgcttttgccccctatctttttgctaattgtgcgattttgcacccc 40221488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 6171336 - 6171373
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  6171336 gtgcaaaatcgcacaattaacaaaaagataaggggcaa 6171373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 528
Target Start/End: Original strand, 6324924 - 6324973
Alignment:
Q  479 ttgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||  ||||| |||||||||||||| || |||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccat 6324973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 683
Target Start/End: Original strand, 20347343 - 20347372
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagata 683  Q
    ||||||||||||||||||||||||||||||    
T  20347343 gtgcaaaatcgcacaattagcaaaaagata 20347372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 683
Target Start/End: Complemental strand, 30191098 - 30191069
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagata 683  Q
    ||||||||||||||||||||||||||||||    
T  30191098 gtgcaaaatcgcacaattagcaaaaagata 30191069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 32673069 - 32673020
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| |||||    
T  32673069 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 11883751 - 11883799
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  11883751 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Complemental strand, 16911322 - 16911267
Alignment:
Q  472 agcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| | |||||||  ||||| |||||||||||||| ||||||||    
T  16911322 agcttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcaccccat 16911267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 17345736 - 17345785
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||||| ||||||    
T  17345736 ttaattgcacttttcccc--tatcttttgctaattatgcaattttgcacccc 17345785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 119; Significance: 2e-60; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 6395 - 6613
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnng--agcgattttgcaccccatcttttatcaattgt 570  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||           ||||||||||||||||||||||| ||||||||    
T  6395 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttttagcgattttgcaccccatcttttgtcaattgt 6494  T
Q  571 gttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaat 670  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||          |||||||| |||||||||||||||||    
T  6495 gttttgttcaaaatcatcattaaaagagaggaaaagggactaaagatagggtgcaaaatcgctc--aagaaaaagaagagaaggtgcaaaatcgcacaat 6592  T
Q  671 tagcaaaaagatatggggcaa 691  Q
    ||||||||||||| |||||||    
T  6593 tagcaaaaagataaggggcaa 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 6749 - 6697
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  6749 gcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 6697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 6623 - 6575
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  6623 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 7e-54; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 22149404 - 22149618
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||        |||||||||||||||||||||||| |||||||||     
T  22149404 gcttaattgcacttttccccc-tatctttgg-taattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatcttttgtcaattgtgc 22149501  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||          |||||||| |||||||||||||||||||    
T  22149502 tttgttcaaaatcatcattaaaagagaggaaaaggggttaaagatagggtgcaaaatcgctc--aaaaaaaagaagagaaggtgcaaaatcgcacaatta 22149599  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  22149600 gcaaaaagataaggggcaa 22149618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 475 - 691
Target Start/End: Original strand, 8108724 - 8108938
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgttt 574  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| |||||| |         |||||||||||||||| |||||||  ||| |||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcacccccttttttttttgagcgattttgcaccctatcttttgccaactgtgttt 8108823  T
Q  575 tgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaattagc 674  Q
    |||||||||||||| ||||||||| |||||| |||| |||||||||||| ||||||||||           ||| ||  ||| |||||||||||||||||    
T  8108824 tgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgaaaaatcgctcaaaaaatat--aagtgagggtgtaaaatcgcacaattagc 8108921  T
Q  675 aaaaagatatggggcaa 691  Q
    |||||||||||||||||    
T  8108922 aaaaagatatggggcaa 8108938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 47955661 - 47955499
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  47955661 gcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtg 47955562  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  47955561 ttttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatagggtgcaaaatcgctc 47955499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 31848245 - 31848085
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||        |||||||||||||||||||||||| ||||||||||    
T  31848245 gcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctcttttttc-gagcgattttgcaccccatcttttgtcaattgtgt 31848147  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||||||| |||||||||  |||| ||||| ||| || ||||||||||||||||    
T  31848146 tttgttcaaaatcatcattaaaagaggagaaatggggcaaaacatggggtgcaaaatcgctc 31848085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 17518304 - 17518520
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||||| |||||||  ||||||||| ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  17518304 gcttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtg 17518402  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||||||||||||||||| ||||||||| |||||| |||| ||||||||| |||||||||||||           ||| ||  ||||||||||||||||||    
T  17518403 ttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagataggatgcaaaatcgctcaaaaaatat--aagtgagggtgcaaaatcgcacaatt 17518500  T
Q  672 agcaaaaagatatggggcaa 691  Q
    |||||||||||| |||||||    
T  17518501 agcaaaaagataaggggcaa 17518520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 41083263 - 41083101
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnng--agcgattttgcaccccatcttttatcaattgt 570  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||| |||||| ||           ||||||||||||||| || ||||  ||| |||    
T  41083263 gcttaattgcacttttccccc-tatcttttgttagttgtgcgattttgcaccccctctttttttttttagcgattttgcacccaatattttgccaactgt 41083165  T
Q  571 gttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||    
T  41083164 gttttgttcaaaatcatcattaaaagagaggaaaaggggcaaaagatagggtgcaaaattgctc 41083101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 539 - 633
Target Start/End: Complemental strand, 1176998 - 1176905
Alignment:
Q  539 agcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||| || || ||||| |||||| |||||||||||||||    
T  1176998 agcgatttcgcaccccatcttttgtcaattgtgttttgttcaaaatcattattaaaagag-gggaatggggcaaaagatggggtgcaaaatcgct 1176905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 473 - 529
Target Start/End: Complemental strand, 8109046 - 8108990
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  8109046 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatc 8108990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 22149750 - 22149701
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 634
Target Start/End: Complemental strand, 46057182 - 46057085
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgtttt-gttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||| |||| |||||  ||||||  |||||||||||| ||||||||||||| ||||||||| ||||| ||||| |||||| ||||||||||||||||    
T  46057182 gagcggttttacaccctttcttttgccaattgtgttttagttcaaaatcatcattaaaagaggggaaagggggcaaaagatcgggtgcaaaatcgctc 46057085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 47955307 - 47955360
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  47955307 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 47955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 48190772 - 48190828
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  48190772 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatc 48190828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 49284410 - 49284465
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  49284410 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 49284465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 13589711 - 13589659
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  13589711 gcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 13589659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 473 - 529
Target Start/End: Complemental strand, 48191408 - 48191352
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||| |||||||||    
T  48191408 gcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccatc 48191352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 9347127 - 9347182
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  9347127 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 9347182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 32163096 - 32163041
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  32163096 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 32163041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 39692053 - 39691998
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||    
T  39692053 gcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccat 39691998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 44911026 - 44911081
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||    
T  44911026 gcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccat 44911081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 50430132 - 50430079
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 50430079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 526
Target Start/End: Complemental strand, 17518653 - 17518602
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  17518653 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacccc 17518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 561
Target Start/End: Original strand, 41082910 - 41082998
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatctttt 561  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||| || ||| ||         |||||||||||||||||||||||    
T  41082910 gcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctctttttttttagcgattttgcaccccatctttt 41082998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 1177069 - 1177018
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||| ||||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcacccc 1177018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 6002238 - 6002293
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||| ||||||||    
T  6002238 gcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccat 6002293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 48105169 - 48105114
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||| ||||||||    
T  48105169 gcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccat 48105114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 1176718 - 1176763
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  1176718 gcttaattgcacttt-cccccctatattttgctaattgtgcgatttt 1176763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 561
Target Start/End: Original strand, 31847898 - 31847984
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatctttt 561  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||| || |||||         |||||||||||||||| |||||||    
T  31847898 ttaattgcactttacccccttatcttttgctaattgtgcaattttgcatcccatattttttttgagcgattttgcacccgatctttt 31847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 524
Target Start/End: Original strand, 46056902 - 46056953
Alignment:
Q  471 tagcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||| ||||    
T  46056902 tagcttaattgcacttt--ccccctatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 528
Target Start/End: Complemental strand, 50526524 - 50526470
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccat 50526470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 8108948 - 8108899
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  8108948 aattgcacttttgccccatatctttttgctaattgtgcgattttacaccc 8108899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 28634208 - 28634155
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 28634155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 46823846 - 46823899
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| ||| ||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccat 46823899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 48104681 - 48104734
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccat 48104734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 524
Target Start/End: Complemental strand, 13918921 - 13918869
Alignment:
Q  472 agcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    ||||||||||||||||||| ||||||  ||||| |||||||||||||| ||||    
T  13918921 agcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacc 13918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 1176839 - 1176890
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||| ||||||||||||||  |||||||| ||||| ||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcacccc 1176890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 4692486 - 4692431
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||||||||  ||||| |||||||| ||||| ||||||||    
T  4692486 gcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccat 4692431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 6703947 - 6703892
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||  ||||| |||||||| ||||| ||||||||    
T  6703947 gcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccat 6703892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 13918447 - 13918502
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| || |||||  ||||| |||||||||||||| ||||||||    
T  13918447 gcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccat 13918502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 19008803 - 19008748
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  |||   |||||||||||||| ||||||||    
T  19008803 gcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccat 19008748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 26814695 - 26814750
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||| ||||||  ||||  |||||||||||||| ||||||||    
T  26814695 gcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccat 26814750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 26815172 - 26815117
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  |||   |||||||||||||| ||||||||    
T  26815172 gcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccat 26815117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 27172117 - 27172171
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||| ||||||||    
T  27172117 gcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccat 27172171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 27172594 - 27172539
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||||| |  ||||| |||||||||||||| || |||||    
T  27172594 gcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccat 27172539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 28633721 - 28633776
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||| |||  ||||| |||||| ||||||| ||||||||    
T  28633721 gcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccat 28633776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 528
Target Start/End: Complemental strand, 6002946 - 6002892
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||  |||||||||||   |||||||||||||| ||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccat 6002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 22149630 - 22149580
Alignment:
Q  475 ttaattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 50615241 - 50615287
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||||    
T  50615241 gcttaattgcacttttcccccctatagtttgtcaattgtgcgatttt 50615287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 50623069 - 50623115
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||||    
T  50623069 gcttaattgcacttttcccccctatagtttgtcaattgtgcgatttt 50623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 17518530 - 17518481
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| |||||    
T  17518530 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 20371405 - 20371353
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||| ||||||    
T  20371405 gcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccc 20371353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 41083083 - 41083046
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  41083083 gtgcaaaatcgcacaattagtaaaaagataaggggcaa 41083046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 524
Target Start/End: Original strand, 42611188 - 42611237
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    ||||||||||||||||||| |||  ||||| |||||||||||||| ||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacc 42611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 683
Target Start/End: Complemental strand, 47955481 - 47955452
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagata 683  Q
    ||||||||||||||||||||||||||||||    
T  47955481 gtgcaaaatcgcacaattagcaaaaagata 47955452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 48313845 - 48313792
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||| |||||| |||  ||||||||||||||||||| ||||| ||||||    
T  48313845 gcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccc 48313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 20480664 - 20480613
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||| |||||||  ||||| |||||||||||||| |||||    
T  20480664 gcttaattgcacttttc-cccctatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 39690795 - 39690847
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||| |||||||||| |||||||| ||| || |||||||||||||| |||||    
T  39690795 gcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 4e-52; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 30388063 - 30388280
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || ||  ||        |||||||||||||||||||||||| |||||| |||    
T  30388063 gcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcagcctctcttttttttgagcgattttgcaccccatcttttgtcaattatgt 30388161  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    ||||||||||||||||  |||||||||| ||||||| |||||||||| ||||||||||||||          |||||||| |||||||||||||||||||    
T  30388162 tttgttcaaaatcatcaataaaagagagaaaaagggactaaagatagagtgcaaaatcgctcaaaaaaaaaagaagagaaggtgcaaaatcgcacaatta 30388261  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  30388262 gcaaaaagataaggggcaa 30388280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 540 - 691
Target Start/End: Original strand, 3403757 - 3403905
Alignment:
Q  540 gcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnn 639  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||         
T  3403757 gcgattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctc---aa 3403853  T
Q  640 nnnnngaagagaatgtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
         |||||||| |||||||||||||||||||||||||||||| |||||||    
T  3403854 aaaaagaagagaaggtgcaaaatcgcacaattagcaaaaagataaggggcaa 3403905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 473 - 630
Target Start/End: Complemental strand, 11656835 - 11656677
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||         ||||||||||||||||||||||||  ||||||||    
T  11656835 gcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctctttatttttgagcgattttgcaccccatcttttgccaattgtg 11656736  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatc 630  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  11656735 ttttgttcaaaatcatcaataaaagagaggtaaaggggctaaagatagggtgcaaaatc 11656677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 18241855 - 18242017
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  18241855 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatcttttgccaactgtg 18241954  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  18241955 ttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctc 18242017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 473 - 627
Target Start/End: Original strand, 33971995 - 33972148
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||| |||| |||| ||||||||| ||||||| ||||||| |||||| ||        |||||||||||||||| |||||||  |||||||||    
T  33971995 gcttaattgcagtttttcccc-tatcttttgttaattgtacgattttgcaccccctcttatttttgagcgattttgcaccctatcttttgccaattgtgt 33972093  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaa 627  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  33972094 tttgttcaaaatcatcattaaaagagaggaaaaggggataaagatagggtgcaaa 33972148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 21032333 - 21032170
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn--gagcgattttgcaccccatcttttatcaattgt 570  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| | || | ||          ||||||||||||||||||||||||| |||||||    
T  21032333 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcgcctcctcttttttctttgagcgattttgcaccccatcttttaccaattgt 21032234  T
Q  571 gttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||||||||| ||||||||| ||||| ||||  |||||| ||||| ||||||||||    
T  21032233 gttttgttcaaaatcatcattaaaagaggggaaagggggtaaaagatggggtgaaaaatcgctc 21032170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 490 - 632
Target Start/End: Original strand, 31598476 - 31598617
Alignment:
Q  490 ccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcg 589  Q
    ||||| |||||||||||| ||||||||||| |||||| ||        ||| |||||||||||||||||||| ||||||||||||||||||||||||||     
T  31598476 ccccccatcttttgctaactgtgcgatttttcaccccctcttttttt-gagagattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatca 31598574  T
Q  590 ttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    ||||||||| || |||||| | |||||| ||||||||||||||    
T  31598575 ttaaaagagggggaaagggacaaaagatggggtgcaaaatcgc 31598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 598
Target Start/End: Original strand, 10039677 - 10039801
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||           |||||||||| ||||||||||||| ||| ||||||    
T  10039677 gcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccctctttttttatgagcgattttacaccccatcttttgtcagttgtgt 10039775  T
Q  573 tttgttcaaaatcatcgttaaaagag 598  Q
    |||||||||||||||| |||||||||    
T  10039776 tttgttcaaaatcatcattaaaagag 10039801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 539 - 631
Target Start/End: Complemental strand, 33658726 - 33658635
Alignment:
Q  539 agcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| || |||||||| ||| ||||||||||||||||    
T  33658726 agcgattttgcaccccgtcttttgtcaattgtgttttgttcaaaatcatcattaaaagag-gggaaaggggcaaaaaatagggtgcaaaatcg 33658635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 31598043 - 31598133
Alignment:
Q  542 gattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| || |||||| | |||||| ||||||||||||||    
T  31598043 gattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagagggggaaagggacaaaagatggggtgcaaaatcgc 31598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 3403718 - 3403774
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3403718 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatc 3403774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 3404042 - 3403989
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3404042 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 564 - 691
Target Start/End: Complemental strand, 2762749 - 2762621
Alignment:
Q  564 caattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc-nnnnnnnnnngaagagaatgtgcaaaat 662  Q
    |||||||||||| |||||||||||| |||||| || |||||| | || |||||||||||||||||||||||           ||||||   |||||||||    
T  2762749 caattgtgttttattcaaaatcatcattaaaaaaggggaaaatgagcaaaagatagggtgcaaaatcgctcaaaaaaaaaaagaagagggggtgcaaaat 2762650  T
Q  663 cgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||||||||| |||||||    
T  2762649 cgcacaattagcaaaaagatagggggcaa 2762621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 630
Target Start/End: Original strand, 23250593 - 23250750
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||||||| |||| |||||||||  ||||||| ||| || |||||| ||        |||||||||||| ||| |||||||  |||||||||    
T  23250593 gcttaattgcactttttcccc-tatcttttgtcaattgtgagatcttgcaccccctcttttttttgagcgattttgcgccctatcttttgccaattgtgt 23250691  T
Q  573 ttt-gttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatc 630  Q
    ||| ||||||||||||| ||||||||| ||||| ||||| |||  | ||||||||||||    
T  23250692 ttttgttcaaaatcatcattaaaagaggggaaagggggcaaaaagtggggtgcaaaatc 23250750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 577 - 632
Target Start/End: Original strand, 13579457 - 13579512
Alignment:
Q  577 ttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  13579457 ttcaaaatcatcattaaaagagaggaaaagggtctaaagacagggtgcaaaatcgc 13579512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 33828991 - 33829046
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  33828991 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 33829046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 33829689 - 33829634
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  33829689 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 33829634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 30388413 - 30388362
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  30388413 ttaattgtactttttccccctatcttttgctaattgtgcgattttgcacccc 30388362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 21031980 - 21032032
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  21031980 gcttaattgcacttttccccc-taacttttgctaattgtgcgattttgcacccc 21032032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 3825530 - 3825580
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  3825530 ttaattgcacttttccccc-tatattttgctaattgtgcgattttgcacccc 3825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 7654601 - 7654546
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  7654601 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 7654546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 10087911 - 10087856
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||||| |  ||||| |||||||||||||| ||||||||    
T  10087911 gcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccat 10087856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 33974352 - 33974297
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||||| ||||||||    
T  33974352 gcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccat 33974297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 526
Target Start/End: Original strand, 2762611 - 2762661
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacccc 526  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacccc 2762661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 526
Target Start/End: Complemental strand, 10039893 - 10039843
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacccc 526  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacccc 10039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 519
Target Start/End: Original strand, 12714436 - 12714478
Alignment:
Q  477 aattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgatttt 12714478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 529
Target Start/End: Complemental strand, 31598778 - 31598725
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||    
T  31598778 ttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcatcccatc 31598725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 10039846 - 10039883
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    |||||||||||||||||||||||||||||| |||||||    
T  10039846 gtgcaaaatcgcacaattagcaaaaagatagggggcaa 10039883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 13579703 - 13579651
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||    
T  13579703 gcttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcacccc 13579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 33972192 - 33972229
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    |||||||||| |||||||||||||||||||||||||||    
T  33972192 gtgcaaaatctcacaattagcaaaaagatatggggcaa 33972229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 526
Target Start/End: Original strand, 11656608 - 11656658
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| ||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcacccc 11656658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 18242035 - 18242072
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  18242035 gtgcaaaatcgcacaattaacaaaaagataaggggcaa 18242072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 18242209 - 18242156
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||| ||||   ||||||||||||| |||||||||||||| ||||||    
T  18242209 gcttaattgcattttttttccctatcttttgccaattgtgcgattttgcacccc 18242156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 32734047 - 32733994
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||| || |||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccat 32733994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 33655167 - 33655115
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||| |||||  ||||||||||||||||||| ||||| ||||||    
T  33655167 gcttaattgcacttgtcccct-tatcttttgctaattgtgcaattttgcacccc 33655115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 3403915 - 3403867
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  3403915 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 368 - 404
Target Start/End: Original strand, 8798647 - 8798683
Alignment:
Q  368 actatacatttatatttgtgactatgatagattttct 404  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  8798647 actattcatttatatttgtgactatggtagattttct 8798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 30388290 - 30388242
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  30388290 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 31598314 - 31598274
Alignment:
Q  485 ttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||| ||| |||||||||||||||||||||||||| |||||    
T  31598314 tttttccctctatcttttgctaattgtgcgattttgcaccc 31598274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 2e-51; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 473 - 688
Target Start/End: Original strand, 16555516 - 16555730
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn--gagcgattttgcaccccatcttttatcaattgt 570  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||          |||||||||||||||| ||||||| ||||||||    
T  16555516 gcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccc-atcttttgtcaattgt 16555614  T
Q  571 gttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaat 670  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||          |||||||| |||||||||||||||||    
T  16555615 gttttgttcaaaatcatcattaaaagagaggaaaaagggctaaagatagggtgcaaaatcgctc--aaaaaaaagaagagaaggtgcaaaatcgcacaat 16555712  T
Q  671 tagcaaaaagatatgggg 688  Q
    ||||||||||||| ||||    
T  16555713 tagcaaaaagataagggg 16555730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 35393828 - 35393614
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||| ||        |||||||||||||||||||||||| ||||||||||    
T  35393828 gcttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcaccccctcttttttatgagcgattttgcaccccatcttttgtcaattgtgt 35393730  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||| ||||||||||| ||||||||| |||||| |||| ||||||||| |||||||||||||          |||||| | |||||||||||||||||||    
T  35393729 tttgctcaaaatcatcattaaaagaggggaaaatgggcaaaagataggctgcaaaatcgctc--ataaaaaagaagagga-gtgcaaaatcgcacaatta 35393633  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  35393632 gcaaaaagatagggggcaa 35393614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 11241390 - 11241606
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||| || ||| ||        |||||||||||||||| |||||||  ||| |||||    
T  11241390 gcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctcttttttttgagcgattttgcaccctatcttttgccaactgtgt 11241489  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||           ||| ||  |||||||||||||||||||    
T  11241490 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaattat--aagtgagggtgcaaaatcgcacaatta 11241587  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  11241588 gcaaaaagataaggggcaa 11241606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 473 - 631
Target Start/End: Complemental strand, 8488534 - 8488377
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||| ||  |||||||| |||||||||||||||| |||||| ||        |||||||||||||||||||||||| |||||||| |    
T  8488534 gcttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatcttttgtcaattgtat 8488436  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||    
T  8488435 tttgttcaaaatcatcattaaaagagaggaaaaggggttaaaaataaggtgcaaaatcg 8488377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 473 - 688
Target Start/End: Original strand, 27304719 - 27304930
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||| |||||||||  |||||| |||||||||||||||||| |||||| ||         ||||||||||||| ||||| ||||  ||||||||    
T  27304719 gcttaattgcccttttcccc--tatcttctgctaattgtgcgattttgcaccccctcttttcttttgagcgattttgcaacccatattttgccaattgtg 27304816  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||           ||||||   ||||||||||||||||||    
T  27304817 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct---taaaaaaggaagagggggtgcaaaatcgcacaatt 27304913  T
Q  672 agcaaaaagatatgggg 688  Q
    |||||||||||| ||||    
T  27304914 agcaaaaagataggggg 27304930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 13198959 - 13198797
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  |||  |||    
T  13198959 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatcttttgccaaccgtg 13198860  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  13198859 ttttgttcaaagtcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctc 13198797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 476 - 634
Target Start/End: Complemental strand, 49178866 - 49178707
Alignment:
Q  476 taattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn--gagcgattttgcaccccatcttttatcaattgtgtt 573  Q
    |||||||||||||| |||||||||||||| |||||||||||||| |||||| ||          ||||||||||||||||||||||||  ||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctctttttttttggagcgattttgcaccccatcttttgccaattgtgtt 49178767  T
Q  574 ttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||| ||||||||| || |||||||| |||||| ||||||||||| ||||    
T  49178766 ttgttcaaaatcatcattaaaagag-gggaaaggggcaaaagattgggtgcaaaattgctc 49178707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 492 - 634
Target Start/End: Original strand, 39415244 - 39415388
Alignment:
Q  492 ccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgt 590  Q
    |||||||||||||||||||||||||||| |||||  ||         |||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccctctctttttatttgagcgattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcat 39415343  T
Q  591 taaaagagaggaaaa-ggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||| |||||| ||||| |||||||| ||||||||||||||    
T  39415344 taaaagaggggaaaagggggcaaaagatagagtgcaaaatcgctc 39415388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 540 - 688
Target Start/End: Original strand, 5206028 - 5206172
Alignment:
Q  540 gcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnn 639  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||         
T  5206028 gcgattttgcaccccatcttttgccaattttattttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcagaaa 5206127  T
Q  640 nnnnngaagagaatgtgcaaaatcgcacaattagcaaaaagatatgggg 688  Q
          |||||   |||||||||||||||||||||||||||||| ||||    
T  5206128 aa----aagagggagtgcaaaatcgcacaattagcaaaaagataggggg 5206172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 3930180 - 3930341
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||||||||| |||| ||||||||  ||||| ||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  3930180 gcttaattgcactttttcccc-tatcttttattaattatgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtg 3930278  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||    
T  3930279 ttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgcaaaatcgctc 3930341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 473 - 683
Target Start/End: Complemental strand, 22681932 - 22681725
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||   |         |||| ||||||||||  ||||||| |||| | |||    
T  22681932 gcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcaccattt-atttttttgagcaattttgcaccatatcttttgtcaactatgt 22681834  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||| ||||| ||||||||||           ||| |||||||||||||||||||||||    
T  22681833 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgtaaaatcgctcaaaaaatat--aagtgaatgtgcaaaatcgcacaatta 22681736  T
Q  673 gcaaaaagata 683  Q
    |||||||||||    
T  22681735 gcaaaaagata 22681725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 632
Target Start/End: Original strand, 7603186 - 7603275
Alignment:
Q  543 attttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| |||||| || ||||| ||| | |||||| ||||||||||||||    
T  7603186 attttgcaccccctcttttgtcaattgtgttttgttcaaaatcatcattaaaataggggaaatgggacaaaagatggggtgcaaaatcgc 7603275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 473 - 603
Target Start/End: Complemental strand, 8182226 - 8182092
Alignment:
Q  473 gcttaattgcacttttcccccctatctttt-gctaattgtgcgattttacacccca---tcnnnnnnnngagcgattttgcaccccatcttttatcaatt 568  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||||| ||||||    |         ||||||||||||| ||||||||||| |||||    
T  8182226 gcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcacccccctctttttttgttgagcgattttgcatcccatcttttaccaatt 8182127  T
Q  569 gtgttttgttcaaaatcatcgttaaaagagaggaa 603  Q
    |||||||||||||||||||| ||||||||| ||||    
T  8182126 gtgttttgttcaaaatcatcattaaaagaggggaa 8182092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 473 - 633
Target Start/End: Original strand, 54508816 - 54508980
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||||||| || || ||||||||| ||||||| |||||| |||||  ||        |||||||||||||||| |||||||   ||||||||    
T  54508816 gcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccctctcttttttttgagcgattttgcaccctatcttttgcaaattgtgt 54508915  T
Q  573 ttt-gttcaaaatcatcgt---taaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    ||| ||||||||||||| |   ||||| || ||||||||||| ||||||| ||||||||||||||    
T  54508916 ttttgttcaaaatcatcatcattaaaataggggaaaaggggcaaaagataaggtgcaaaatcgct 54508980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 631
Target Start/End: Complemental strand, 3844470 - 3844377
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||  |||||   ||  |||||| |||||||||||||    
T  3844470 gagcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagatgggaaagatggaaaaagatggggtgcaaaatcg 3844377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 561
Target Start/End: Complemental strand, 16555870 - 16555781
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc-nnnnnnnngagcgattttgcaccccatctttt 561  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||         ||||||||||||||||||||||||    
T  16555870 gcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttt 16555781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 56505694 - 56505749
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  56505694 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccat 56505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 50678780 - 50678835
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  50678780 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 50678835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 3930532 - 3930480
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  3930532 gcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 3930480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 18077255 - 18077202
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  18077255 gcttaattgcacttttcacccctattttttgctaattgtgcgattttgcacccc 18077202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 471 - 528
Target Start/End: Original strand, 25161877 - 25161934
Alignment:
Q  471 tagcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  25161877 tagcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 25161934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 36096526 - 36096473
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 36096473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 473 - 529
Target Start/End: Complemental strand, 24775836 - 24775780
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||    
T  24775836 gcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccatc 24775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 594
Target Start/End: Complemental strand, 24775797 - 24775742
Alignment:
Q  540 gcgattttgcaccccatcttttatcaattgtg-ttttgttcaaaatcatcgttaaa 594  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  24775797 gcgattttgcaccccatcttttgtcaattgtgtttttgttcaaaatcatcattaaa 24775742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 28196347 - 28196402
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  28196347 gcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccat 28196402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 28196826 - 28196771
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  28196826 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 28196771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 32703703 - 32703648
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  32703703 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 32703648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 36095818 - 36095873
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||    
T  36095818 gcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccat 36095873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 45830249 - 45830194
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||| ||||||||| |||||||||||||  |||||||||||||||||||||||    
T  45830249 gcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccat 45830194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 50679477 - 50679422
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||    
T  50679477 gcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccat 50679422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 11529166 - 11529224
Alignment:
Q  470 ttagcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||| |||||| ||||||||    
T  11529166 ttagcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccat 11529224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 526
Target Start/End: Original strand, 22681572 - 22681628
Alignment:
Q  469 attagcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||    
T  22681572 attagcttaattgcacttt-cccccctatcttttgtcaattgtgcgattttgcacccc 22681628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 5205989 - 5206045
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||||||| |||||||||||| |||||  |||||||| |||||||||    
T  5205989 gcttaattgcacttttcctccctatcttttgttaatttggcgattttgcaccccatc 5206045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 4239419 - 4239364
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||||    
T  4239419 gcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccat 4239364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 9023245 - 9023300
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||||    
T  9023245 gcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccat 9023300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 9023733 - 9023678
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  9023733 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 9023678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 9380308 - 9380363
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| | ||||||    
T  9380308 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccat 9380363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 9380794 - 9380739
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||| ||||    
T  9380794 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccat 9380739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 26207799 - 26207744
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||||| ||||||||    
T  26207799 gcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccat 26207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 39744518 - 39744463
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  39744518 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 39744463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 43051305 - 43051250
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| ||||| |||||||||||||| ||||||| |||||| ||||||||    
T  43051305 gcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccat 43051250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 8181992 - 8182046
Alignment:
Q  473 gcttaattgcacttttcccccctatc-ttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||| ||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacccc 8182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 526
Target Start/End: Complemental strand, 27304943 - 27304893
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacccc 526  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcacccc 27304893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 32703226 - 32703279
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||  ||||| |||||||||||| | ||||||    
T  32703226 gcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 43050610 - 43050663
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||  ||||||||||| | |||||||||||||| ||||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccat 43050663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 47219252 - 47219203
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    ||||||||| ||||| || |||||||||||||||||||||||||| ||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgcacc 47219203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 169014 - 169070
Alignment:
Q  473 gcttaattgcacttttc-ccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||||    
T  169014 gcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccat 169070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 5206282 - 5206231
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||| |||||    
T  5206282 gcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 529
Target Start/End: Complemental strand, 11241713 - 11241658
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||| ||||||||||| |||||||||| ||||||| |||||| |||||||||    
T  11241713 gcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcaccccatc 11241658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 513
Target Start/End: Original strand, 49178534 - 49178574
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgc 513  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  49178534 gcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 169492 - 169437
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| |||||||||||||  ||||  |||||||||||||| ||||||||    
T  169492 gcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccat 169437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 293270 - 293215
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||||||||  ||||  |||||||||||||| ||||||||    
T  293270 gcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccat 293215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 13198606 - 13198657
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||| ||  |||||||||| |||||||||||||| ||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcacccc 13198657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 26207362 - 26207416
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||| |||||||||  ||||| |||||||||||||| ||||||||    
T  26207362 gcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcaccccat 26207416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 39744031 - 39744086
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||||||||  ||| | |||||||||||||| ||||||||    
T  39744031 gcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccat 39744086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 292783 - 292829
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||    
T  292783 gcttaattgcacttttcccccctatagtttgccaattgtgcaatttt 292829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 519
Target Start/End: Complemental strand, 39415577 - 39415531
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  39415577 gcttaactgcactttttccctctatcttttgctaattgtgcaatttt 39415531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 526
Target Start/End: Original strand, 49178644 - 49178694
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||| ||||||||| |||||| |||||||||||||| ||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 519
Target Start/End: Complemental strand, 56506627 - 56506581
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    ||||||||||||||||| ||| |||||||||| |||||||| |||||    
T  56506627 gcttaattgcacttttcacccttatcttttgccaattgtgcaatttt 56506581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 683
Target Start/End: Original strand, 3930359 - 3930388
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagata 683  Q
    ||||||||||||||||||||||||||||||    
T  3930359 gtgcaaaatcgcacaattagcaaaaagata 3930388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 522
Target Start/End: Original strand, 39912055 - 39912104
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttaca 522  Q
    |||||||||||||||||| ||||||  |||  ||||||||||||||||||    
T  39912055 gcttaattgcacttttcctccctatagtttattaattgtgcgattttaca 39912104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 49178691 - 49178654
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  49178691 gtgcaaaatcgcacaattggcaaaaagatagggggcaa 49178654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 23539842 - 23539895
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||  ||||||||  ||||| |||||||||||||| ||||||||    
T  23539842 gcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccat 23539895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 23540305 - 23540253
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||| |||||||  ||||  |||||||||||||| |||||    
T  23540305 gcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccc 23540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 25225451 - 25225399
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||||| |  | |||||||||||| |||||||||||||| |||||    
T  25225451 gcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 54509156 - 54509116
Alignment:
Q  485 ttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||| |||||||| ||||||||||||||||||||| |||||    
T  54509156 tttttccccctattttttgctaattgtgcgattttgcaccc 54509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 100; Significance: 4e-49; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 439252 - 439036
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| || ||| ||        |||||||||||||||||||||||| ||||||||||    
T  439252 gcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctcttttttt-gagcgattttgcaccccatcttttgtcaattgtgt 439154  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaa-ggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||          ||||||||  |||||||| ||||||||    
T  439153 tttcttcaaaatcatcattaaaagagaggaaaagggggctaaagatagggtgcaaaatcgctc--aaaaaaaagaagagaagatgcaaaattgcacaatt 439056  T
Q  672 agcaaaaagatatggggcaa 691  Q
    |||||||||||| |||||||    
T  439055 agcaaaaagataaggggcaa 439036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 634
Target Start/End: Original strand, 183430 - 183526
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||||||||||| ||||||||| ||||  ||||| |||||||||||| ||||||||||    
T  183430 gagcgattttgcacctcatattttgccaattgtgttttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggtgaaaaatcgctc 183526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 438931 - 438984
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  438931 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 438984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 518
Target Start/End: Complemental strand, 183715 - 183670
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattt 518  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  183715 gcttaattgcacttttcccccctatattttgctaattgtgcgattt 183670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 99; Significance: 2e-48; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 538 - 691
Target Start/End: Original strand, 25134 - 25285
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnn 637  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||       
T  25134 gagcgattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaattgctc--a 25231  T
Q  638 nnnnnnngaagagaatgtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
           |||||||| |||||||||||||||||||||||||||||| |||||||    
T  25232 aaaaaaagaagagaaggtgcaaaatcgcacaattagcaaaaagataaggggcaa 25285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 25422 - 25369
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25422 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 25369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 25295 - 25247
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacacc 524  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  25295 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 1e-46; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 9027085 - 9026870
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||||||||| |         ||| ||||||||||||||||||||  |||||||||    
T  9027085 gcttaatttcacttttccccc-tatcttttgctaattgtgcaattttacaccccttgttttttttgagtgattttgcaccccatcttttgccaattgtgt 9026987  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatta 672  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||          |||||||  |||||||||||||||||||    
T  9026986 tttgttaaaaatcatcattaaaagagaggaaaaggggctaaagataaggtgcaaaatcgttc--aaaaaaaagaagagagagtgcaaaatcgcacaatta 9026889  T
Q  673 gcaaaaagatatggggcaa 691  Q
    ||||||||||| |||||||    
T  9026888 gcaaaaagatagggggcaa 9026870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 473 - 634
Target Start/End: Complemental strand, 10293962 - 10293800
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  10293962 gcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatcttttgccaactgtg 10293863  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  10293862 ttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctc 10293800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 473 - 691
Target Start/End: Complemental strand, 18875244 - 18875027
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| |||||| ||         ||||||||||||||||||||||||  ||||||||    
T  18875244 gcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctctttttttttgagcgattttgcaccccatcttttggcaattgtg 18875145  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaaga-gaatgtgcaaaatcgcacaat 670  Q
    |||| |||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||          ||||| | | |||||||||||||||||    
T  18875144 ttttattcaaaatcatcattaaaatagaagaaaatgggctaaagatagggtgcaaaatcgctc---aaaaaaagaagagggaggtgcaaaatcgcacaat 18875048  T
Q  671 tagcaaaaagatatggggcaa 691  Q
    ||||||||||||| |||||||    
T  18875047 tagcaaaaagatagggggcaa 18875027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 20968719 - 20968881
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||| ||||    
T  20968719 gcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtg 20968818  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  20968819 ttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctc 20968881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 17372299 - 17372461
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||| |||||| |         ||||||||||||||||||||||||  ||||||| |    
T  17372299 gcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccctgttttttttgagcgattttgcaccccatcttttgccaattgtat 17372398  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaa-aaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||||||| ||||||||| ||||  |||||| |||||| ||||||||||| ||||    
T  17372399 tttgttcaaaatcatcattaaaagaggggaaggaggggcaaaagatggggtgcaaaattgctc 17372461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 538 - 634
Target Start/End: Original strand, 3644599 - 3644695
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||| ||||||||  |||||||||||||||| |||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  3644599 gagcgattttgcacctcatcttttgccaattgtgttttgttcgaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctc 3644695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 473 - 632
Target Start/End: Original strand, 45060597 - 45060756
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||  || |  |         |||||||||||||||| || |||| ||||||||||    
T  45060597 gcttaattgcacttttccccactatcttttgctaattatgcgattttgtactcttttttttttttgagcgattttgcaccctattttttgtcaattgtgt 45060696  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    |||||||||||||||| |||||| || |||||  |||| |||||| ||||||||||||||    
T  45060697 tttgttcaaaatcatcattaaaataggggaaagtgggcaaaagatggggtgcaaaatcgc 45060756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 47870824 - 47870983
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcga-ttttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||||||||| |||| ||||||||||||||| ||||| |||| |||||| |         ||||||||||||||||||||||||  ||||||||    
T  47870824 gcttaattgcactttttcccc-tatcttttgctaattatgcgaattttgcacccctt--tttttttgagcgattttgcaccccatcttttgccaattgtg 47870920  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||| |||||||| ||||||| | |||||| |||| |||||| ||||||||||||||||    
T  47870921 ttttgttcgaaatcatcattaaaagtggggaaaatgggcaaaagatggggtgcaaaatcgctc 47870983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 634
Target Start/End: Complemental strand, 26540905 - 26540760
Alignment:
Q  490 ccccctatcttttgctaattgtgcgattttacacc-ccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatc 588  Q
    ||||||||||||||||||||||||||||||||||  || |         ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  26540905 ccccctatcttttgctaattgtgcgattttacacttcctttttttttttgagcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcatc 26540806  T
Q  589 gttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
     ||||||||| ||||| | ||| ||||||  |||||||||| ||||    
T  26540805 attaaaagaggggaaatgaggcaaaagatgaggtgcaaaattgctc 26540760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 538 - 629
Target Start/End: Original strand, 13657513 - 13657603
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaat 629  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| || |||||||  |||||| |||||||||||    
T  13657513 gagcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagag-gggaaaggggtaaaagatggggtgcaaaat 13657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 473 - 678
Target Start/End: Complemental strand, 42627598 - 42627395
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||| || |||           ||||||||||||||||||| ||||  ||||||| |    
T  42627598 gcttaattgcacttttccctc-tatcttttgctaattgtgtgattttgcatccctctttttttatgagcgattttgcaccccattttttgccaattgttt 42627500  T
Q  573 ttt-gttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||| ||||||||||||| ||||||||| ||||||||| | ||| ||||| |||||||||||||          |||||| | ||||||||||||||||||    
T  42627499 ttttgttcaaaatcatcattaaaagaggggaaaagggacaaaatataggatgcaaaatcgctc--aaaaaaaagaagaggaggtgcaaaatcgcacaatt 42627402  T
Q  672 agcaaaa 678  Q
    |||||||    
T  42627401 agcaaaa 42627395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 474 - 630
Target Start/End: Original strand, 1100917 - 1101070
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgtt 573  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||| |||||  |          | | ||||||||||||||||||| |||||||| ||    
T  1100917 cttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccctttttttttt---atcaattttgcaccccatcttttgtcaattgtatt 1101013  T
Q  574 ttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatc 630  Q
    ||||||||||| ||| ||||||||| |||||| |||  ||| || ||||||||||||    
T  1101014 ttgttcaaaattatcattaaaagaggggaaaatggggcaaaaatggggtgcaaaatc 1101070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 473 - 561
Target Start/End: Complemental strand, 20969072 - 20968984
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatctttt 561  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||| |         ||||||||||||||||||||||||    
T  20969072 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccctttttttttttgagcgattttgcaccccatctttt 20968984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 45060924 - 45060872
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45060924 gcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 634
Target Start/End: Complemental strand, 17441046 - 17440954
Alignment:
Q  542 gattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaagg-ggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||| | || ||||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| ||| |||||| |||||    
T  17441046 gattttgcaccccatatgttgtcaattgtgttatgttcaaaatcatcattaaaagag-ggaaaaggcggcaaaagatggggagcaaaagcgctc 17440954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 47871174 - 47871122
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  47871174 gcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacccc 47871122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 18874887 - 18874935
Alignment:
Q  477 aattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  18874887 aattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 48159898 - 48159953
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  48159898 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 48159953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 1101234 - 1101182
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||| |||||    
T  1101234 gcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 1927773 - 1927825
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||| |||||    
T  1927773 gcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 529
Target Start/End: Complemental strand, 3644836 - 3644780
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    ||||||||||| ||||||||| ||| ||||| ||||||||||||||| |||||||||    
T  3644836 gcttaattgcatttttcccccttattttttgttaattgtgcgattttgcaccccatc 3644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 40848522 - 40848576
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||||||||||||    
T  40848522 gcttaattgcacttttccccc-tatagtttgccaattgtgcgattttacaccccat 40848576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 40849014 - 40848959
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||| ||||  ||||| |||||||||||||| ||||||||    
T  40849014 gcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccat 40848959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 47666388 - 47666333
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||| ||||||||    
T  47666388 gcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccat 47666333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 48160386 - 48160331
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||| |||||||||  ||||| |||||||||||||| ||||||||    
T  48160386 gcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccat 48160331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 53687889 - 53687944
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  53687889 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 53687944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 529
Target Start/End: Complemental strand, 14016014 - 14015961
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||||  || ||||||||||||||||||||||||| |||||||||    
T  14016014 ttaattgcacttttcatcc-tatcttttgctaattgtgcgattttgcaccccatc 14015961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 1928484 - 1928432
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||    
T  1928484 ttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcaccccat 1928432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 525
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  476 taattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||| |||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 634
Target Start/End: Original strand, 14015765 - 14015856
Alignment:
Q  542 gattttgcaccccatcttttatcaattgtgtttt-gttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||| |||||||   ||||||||||| ||||||||||||| ||||||||| |||||  |||| |||||  ||||||||||||||||    
T  14015765 gattttgcaccc-atcttttgcaaattgtgtttttgttcaaaatcatcattaaaagaggggaaagagggcaaaaga-ggggtgcaaaatcgctc 14015856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 528
Target Start/End: Complemental strand, 27238951 - 27238898
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||| ||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccat 27238898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 8314014 - 8314066
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||| ||||||| |||||  |||||||||||||| |||||    
T  8314014 gcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacacc 524  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 22429159 - 22429211
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||| ||||||| |||||| |||||||||| ||| |||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 53766632 - 53766580
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||| |||||    
T  53766632 gcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 519
Target Start/End: Original strand, 9026860 - 9026903
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgatttt 519  Q
    |||||||||||| ||||||||| |||||||||||||||||||||    
T  9026860 aattgcacttttgccccctatctttttgctaattgtgcgatttt 9026903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 526
Target Start/End: Complemental strand, 17372646 - 17372594
Alignment:
Q  472 agcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||||| ||||||    
T  17372646 agcttaattgcacttttcccc--tatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 23630086 - 23630035
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||| || ||||| ||||| ||||||||||||||| ||||||    
T  23630086 ttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccc 23630035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 36181043 - 36180988
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||| ||||||  |||| |||||||||||||||  |||||||    
T  36181043 gcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccat 36180988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 42672979 - 42673033
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||| ||||||||    
T  42672979 gcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccat 42673033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 632
Target Start/End: Complemental strand, 4947545 - 4947452
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    ||||||||||||||   |||||||  |||||||||||||||||||||| || |  ||| || |||||  |||| ||| |||||||||||||||||    
T  4947545 gagcgattttgcacat-atcttttgccaattgtgttttgttcaaaatcgtcatagaaataggggaaagagggcaaaaaatagggtgcaaaatcgc 4947452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 17441116 - 17441066
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacac 523  Q
    ||||||||||| |||||| | |||||||||| ||||||||||||||| |||    
T  17441116 gcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 42455791 - 42455837
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||||||||||||  ||||  ||||||||||||||    
T  42455791 gcttaattgcacttttcccccctatagtttgtcaattgtgcgatttt 42455837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 10293609 - 10293662
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||| ||||  |||||||||||||  |||||||||||||| ||||||    
T  10293609 gcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcacccc 10293662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 10293782 - 10293745
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  10293782 gtgcaaaatcgcacaattaacaaaaagataaggggcaa 10293745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 20968946 - 20968897
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| |||||    
T  20968946 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 20968899 - 20968936
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  20968899 gtgcaaaatcgcacaattagcaaaatgataaggggcaa 20968936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 21895658 - 21895715
Alignment:
Q  473 gcttaattgcac-ttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||| |||||||| |||| |||||| ||||||| |||||| |||||||||    
T  21895658 gcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccatc 21895715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 3644772 - 3644720
Alignment:
Q  475 ttaattgcacttttcccccctatctt-ttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||| ||| ||||| | ||||||||||||||||||| ||||||    
T  3644772 ttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcacccc 3644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 8315134 - 8315083
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||| ||||||||| |||||  |||||||||||||| |||||    
T  8315134 gcttaattgcacttt-cccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Complemental strand, 13657673 - 13657621
Alignment:
Q  475 ttaattgcacttttcccccctatctttt-gctaattgtgcgattttacacccc 526  Q
    ||||||||||||||  |||||||||||| || |||||||||||||| ||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 513
Target Start/End: Complemental strand, 13657775 - 13657735
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgc 513  Q
    ||||||||||||||||| | | |||||||||||||||||||    
T  13657775 gcttaattgcacttttctctcatatcttttgctaattgtgc 13657735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 27238466 - 27238518
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||| ||||||||| |||||  ||||| |||||||||||||| |||||    
T  27238466 gcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccc 27238518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 4e-46; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 542 - 691
Target Start/End: Original strand, 13772683 - 13772831
Alignment:
Q  542 gattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnn 641  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||           
T  13772683 gattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctc-aaaaaa 13772781  T
Q  642 nnngaagagaatgtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
       |||||||| |||||||||||||||||||||||||||||| |||||||    
T  13772782 aaagaagagaaggtgcaaaatcgcacaattagcaaaaagataaggggcaa 13772831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 9412024 - 9412186
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||         |||||||||| ||||| |||||||  ||| ||||    
T  9412024 gcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatcttttgccaactgtg 9412123  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  9412124 ttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctc 9412186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 634
Target Start/End: Original strand, 3687354 - 3687518
Alignment:
Q  473 gcttaattgcacttttcccccc-tatcttttgctaattgtgcgattttacaccccatcnnnnnnnn--gagcgattttgcaccccatcttttatcaattg 569  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||          |||||||||||||||| |||||||  ||| ||    
T  3687354 gcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccctatcttttgccaactg 3687453  T
Q  570 tgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||||| ||||||||| |||||| |||| |||||| ||||||||||||||||    
T  3687454 tgttttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatggggtgcaaaatcgctc 3687518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 539 - 634
Target Start/End: Original strand, 6908280 - 6908375
Alignment:
Q  539 agcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||| | |||||||  ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  6908280 agcgattttgcactctatcttttgccaattgtgttttgttcaaaatcatcattaaaagagaggaaaaatggctaaagatagggtgcaaaatcgctc 6908375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 474 - 630
Target Start/End: Original strand, 29291808 - 29291965
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||| | |||||||||||| ||||| ||||||||| |||||| ||         |||||||||| |||||||||||||  |||||||||    
T  29291808 cttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctcttttttttagagcgattttacaccccatcttttgccaattgtgt 29291907  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatc 630  Q
    |||||||||||||||| ||||||||| |||||  |||| |||||| ||||||||||||    
T  29291908 tttgttcaaaatcatcattaaaagaggggaaagagggcaaaagatggggtgcaaaatc 29291965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 473 - 633
Target Start/End: Complemental strand, 23686770 - 23686611
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||           ||||||||||||||||||||||||  ||| |||||    
T  23686770 gcttaattgcactttttccccctatcttttgctaattgtgcgattttg-acccctcttttttttggagcgattttgcaccccatcttttgccaaatgtgt 23686672  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    |||||||||||||||| ||||||||| || ||  |||  |||||| |||||||||||||||    
T  23686671 tttgttcaaaatcatcattaaaagagggggaattgggtgaaagatggggtgcaaaatcgct 23686611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 538 - 634
Target Start/End: Original strand, 5349527 - 5349623
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||| || ||| |||| |||||| ||||||||||||||||    
T  5349527 gagcgattttgcaccccatcttttgtcaaccgtgttttgttcaaaatcatcattaaaagagggggaaatgggcaaaagatggggtgcaaaatcgctc 5349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 538 - 634
Target Start/End: Original strand, 15567056 - 15567152
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| | ||||||||| |||||| || || ||||||||||    
T  15567056 gagcgattttgcaccccatcttttgtcaattgtgttttgttcaaaatcagcattaaaagagggaaaaaggggcaaaagatgggatgaaaaatcgctc 15567152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 634
Target Start/End: Complemental strand, 27096329 - 27096233
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||| ||||  ||||| |||||||||||| ||||| ||||    
T  27096329 gagcgattttgcaccccatattttgccaattgtgttttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggtgaaaaattgctc 27096233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 634
Target Start/End: Original strand, 27181974 - 27182070
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||| ||||  ||||| |||||||||||| ||||| ||||    
T  27181974 gagcgattttgcaccccatattttgccaattgtgttttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggtgaaaaattgctc 27182070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 540 - 631
Target Start/End: Complemental strand, 33628674 - 33628582
Alignment:
Q  540 gcgattttgcaccccatcttttatcaattgtgttttgttcaaaa-tcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    ||||||||||||||||||||||  ||||||| ||||||| |||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  33628674 gcgattttgcaccccatcttttgccaattgttttttgttaaaaaatcatcattaaaagagaggaaaaggggctaaagataaggttcaaaatcg 33628582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 473 - 561
Target Start/End: Complemental strand, 3687709 - 3687621
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatctttt 561  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||        ||||||||||||||||||||||||    
T  3687709 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 3687621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 552 - 633
Target Start/End: Original strand, 34235759 - 34235840
Alignment:
Q  552 cccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgct 633  Q
    ||||||||||  ||||||||||||||||||||||||| ||||||||| ||||  ||||| |||||| |||||||||||||||    
T  34235759 cccatcttttgccaattgtgttttgttcaaaatcatctttaaaagaggggaatgggggcaaaagatggggtgcaaaatcgct 34235840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 634
Target Start/End: Original strand, 35080023 - 35080112
Alignment:
Q  544 ttttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||  |||||||||| |||||  | ||||||||||||||    
T  35080023 ttttgcaccccatcttttgacaattgtgttt-gttcaaaatcatcattaaaagaggtgaaaaggggcaaaagaatgagtgcaaaatcgctc 35080112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 683
Target Start/End: Complemental strand, 38191548 - 38191405
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnn 637  Q
    ||||||||||||| || || |||| |||||||||||||||||||||||||| ||||||||| ||  ||||||| |||||| |||| |||||| ||||       
T  38191548 gagcgattttgcatcctattttttgtcaattgtgttttgttcaaaatcatcattaaaagagggggtaaggggcaaaagatggggt-caaaattgctc-aa 38191451  T
Q  638 nnnnnnngaagagaatgtgcaaaatcgcacaattagcaaaaagata 683  Q
           |||||| | |||||||||||||||||| |||||||||||    
T  38191450 aaaaacagaagaggaggtgcaaaatcgcacaattggcaaaaagata 38191405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 9412378 - 9412325
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9412378 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 9412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 13772954 - 13772901
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  13772954 gcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacccc 13772901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 543 - 608
Target Start/End: Original strand, 18925128 - 18925193
Alignment:
Q  543 attttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggg 608  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||| | |||||||    
T  18925128 attttgcaccccatattttgtcaattgtgttttgttcaaaatcatcattaaaagagggaaaaaggg 18925193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 13772642 - 13772698
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  13772642 gcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccatc 13772698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 44599490 - 44599545
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  44599490 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 44599545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 44600188 - 44600133
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  44600188 gcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 44600133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 5735249 - 5735299
Alignment:
Q  469 attagcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  5735249 attagcttaattgcacttttctcccctatctttggctaattgtgcgatttt 5735299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 539 - 633
Target Start/End: Complemental strand, 5735533 - 5735438
Alignment:
Q  539 agcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggct-aaagatagggtgcaaaatcgct 633  Q
    |||||||||||||| ||| | ||  ||||||| ||||||||||||||||| ||||||||| || ||||||| | |||||| | |||||||||||||    
T  5735533 agcgattttgcacctcatatcttgccaattgtattttgttcaaaatcatcattaaaagagggggaaagggggtaaaagatggtgtgcaaaatcgct 5735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 9035346 - 9035291
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  9035346 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 9035291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 10533035 - 10533090
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  10533035 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 10533090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 13863314 - 13863369
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||    
T  13863314 gcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccat 13863369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 37888834 - 37888889
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  37888834 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 37888889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 37889312 - 37889257
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  37889312 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 37889257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 37972449 - 37972394
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  37972449 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 37972394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 518
Target Start/End: Complemental strand, 13864009 - 13863964
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattt 518  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||    
T  13864009 gcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 20418891 - 20418944
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||  ||||| |||||||||||||| ||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccat 20418944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 529
Target Start/End: Complemental strand, 33628709 - 33628657
Alignment:
Q  477 aattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||| ||| ||||||||| |||||||||||||||| |||||||||    
T  33628709 aattgcactttttccctctatcttttactaattgtgcgattttgcaccccatc 33628657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 8643819 - 8643764
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||  ||||||||||| | |||||||||||||| ||||||||    
T  8643819 gcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccat 8643764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 17156968 - 17157023
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  17156968 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 17157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 20419377 - 20419322
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  20419377 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 20419322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 22740157 - 22740212
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  22740157 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 22740212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 29292923 - 29292978
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||| || |||||    
T  29292923 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccat 29292978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 529
Target Start/End: Complemental strand, 5349783 - 5349730
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||||   ||||||||||||| ||||||||||||||| |||||||||    
T  5349783 gcttaattgcacttt---cccctatcttttgttaattgtgcgattttgcaccccatc 5349730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 525
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  6908534 ttaattgcacttt-cccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 18925063 - 18925109
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||    
T  18925063 gcttaattgcacttttcttccctatcttttgctaattgtgcaatttt 18925109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 27096048 - 27096093
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27096048 gcttaattgcacttt-cccccctatattttgctaattgtgcgatttt 27096093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 519
Target Start/End: Complemental strand, 27182255 - 27182210
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27182255 gcttaattgcacttt-cccccctatattttgctaattgtgcgatttt 27182210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 42418592 - 42418638
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||    
T  42418592 gcttaatttcacttttcccccctatagtttgctaattgtgcgatttt 42418638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 3205146 - 3205093
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  3205146 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 8953941 - 8953889
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||| ||||||    
T  8953941 gcttaattgcacttttccccc-tatcttttgttaattgtgcaattttgcacccc 8953889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 9034868 - 9034921
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||||||||||||  ||||| |||||||||||| | ||||||    
T  9034868 gcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccc 9034921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 528
Target Start/End: Original strand, 18863970 - 18864023
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||  ||||  |||||||||||||| ||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccat 18864023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Complemental strand, 18925374 - 18925320
Alignment:
Q  472 agcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||||| |  ||| ||||||||||||||||||||| ||||||||    
T  18925374 agcttaattgcacttttcctc--tatattttgctaattgtgcgattttgcaccccat 18925320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 29292094 - 29292041
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||  || ||| |||||||||||||||||||||| ||||||    
T  29292094 gcttaattgcacttttttcctctaacttttgctaattgtgcgattttccacccc 29292041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 5735598 - 5735554
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||| |||||||||||||  |||||||||||||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgatttt 5735554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 6908214 - 6908265
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||    
T  6908214 gcttaattgcacttttccccc-tatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 23686422 - 23686473
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||| |||||    
T  23686422 gcttaattgcacttttcccc-ctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 526
Target Start/End: Complemental strand, 34236030 - 34235978
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||| | |||||||  |||||||||||||||||||||||||| ||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttgcacccc 34235978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 35079961 - 35080012
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||| |||||    
T  35079961 gcttaattgcacttttcccc-ctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 13741558 - 13741613
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| |||||||||||||  ||| | |||||||||||||| ||||||||    
T  13741558 gcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccat 13741613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 506
Target Start/End: Complemental strand, 15567322 - 15567291
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgcta 506  Q
    ||||||||||||||||||||||||||||||||    
T  15567322 ttaattgcacttttcccccctatcttttgcta 15567291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 29293399 - 29293344
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||||| ||| ||||    
T  29293399 gcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccat 29293344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 37971961 - 37972016
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||    
T  37971961 gcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccat 37972016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 46816364 - 46816309
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||| ||||||||| | |||| ||||||||| ||||||||    
T  46816364 gcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccat 46816309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 654 - 688
Target Start/End: Original strand, 6908393 - 6908427
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatgggg 688  Q
    |||||||||||||||||||||||||||||| ||||    
T  6908393 gtgcaaaatcgcacaattagcaaaaagataggggg 6908427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 472 - 518
Target Start/End: Original strand, 39983699 - 39983745
Alignment:
Q  472 agcttaattgcacttttcccccctatcttttgctaattgtgcgattt 518  Q
    |||||||||||||||||||||| ||||||||  ||||| ||||||||    
T  39983699 agcttaattgcacttttcccccttatcttttattaattatgcgattt 39983745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 6908440 - 6908391
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacaccc 525  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||| |||||    
T  6908440 aattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 9412204 - 9412241
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  9412204 gtgcaaaatcgcacagttagcaaaaagataaggggcaa 9412241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 18925232 - 18925269
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagatatggggcaa 691  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  18925232 gtgcaaaatcgcacaattggcaaaaagatagggggcaa 18925269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 3204670 - 3204723
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||  ||||||||  ||||| |||||||||||||| ||||||||    
T  3204670 gcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccat 3204723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 23686544 - 23686596
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgct-aattgtgcgattttacacccc 526  Q
    |||||||||||||| ||||||||||||| || |||| ||| ||||||||||||    
T  23686544 ttaattgcacttttgccccctatctttttctcaattttgcaattttacacccc 23686596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 38191265 - 38191309
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||| |  ||||||||||||||| |||||||||    
T  38191265 ttaattgcacttttcctctttatcttttgctaattatgcgatttt 38191309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 38191618 - 38191566
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccc 525  Q
    ||||||||||| ||||  ||||||||||||| ||||| ||||||||| |||||    
T  38191618 gcttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 86; Significance: 1e-40; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 473 - 691
Target Start/End: Original strand, 1119 - 1336
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||| |||||| ||         |||||||||||||||| |||||||  ||||||||    
T  1119 gcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaattgtg 1218  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcnnnnnnnnnngaagagaatgtgcaaaatcgcacaatt 671  Q
    ||||||||||||||||| ||||||||| || ||| |||| |||||||||||||||||||||||           ||| ||  ||||||||||||||||||    
T  1219 ttttgttcaaaatcatcattaaaagagggggaaaagggcaaaagatagggtgcaaaatcgctcaaaaaatat--aagtgagggtgcaaaatcgcacaatt 1316  T
Q  672 agcaaaaagatatggggcaa 691  Q
    |||||||||||| |||||||    
T  1317 agcaaaaagataaggggcaa 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 1473 - 1420
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  1473 gcttaattgcactttttccccctatcttttgccaattgtgcgattttgcacccc 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 1346 - 1297
Alignment:
Q  477 aattgcacttttcccccctatctttt-gctaattgtgcgattttacaccc 525  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| |||||    
T  1346 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 473 - 631
Target Start/End: Complemental strand, 17208 - 17049
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn--gagcgattttgcaccccatcttttatcaattgt 570  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| |||| | ||          ||||||||||||||||||||||||  |||||||    
T  17208 gcttaattgcacttttccccc-tatcttttgctaattgtgcaattttgcaccgcctcttttttttttgagcgattttgcaccccatcttttgccaattgt 17110  T
Q  571 gttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  17109 gttttgttcaaaatcatccttaaaagagaggaaaaggggctaaagataaggtgcgaaatcg 17049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 73; Significance: 6e-33; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 473 - 632
Target Start/End: Original strand, 45538 - 45697
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn-gagcgattttgcaccccatcttttatcaattgtg 571  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| ||| || ||         |||||||||||||||| |||||||  ||| ||||    
T  45538 gcttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcactccctctttttttttgagcgattttgcaccctatcttttgccaactgtg 45636  T
Q  572 ttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgc 632  Q
    ||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||    
T  45637 ttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgc 45697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 45859 - 45807
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  45859 gcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacccc 45807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 683
Target Start/End: Original strand, 45686 - 45715
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagata 683  Q
    ||||||||||||||||||||||||||||||    
T  45686 gtgcaaaatcgcacaattagcaaaaagata 45715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 473 - 631
Target Start/End: Original strand, 205688 - 205844
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||| ||        || |||||||||||| ||||||||  |||||||||    
T  205688 gcttaattgcatttttctccc-tatcttttgctaattgtgcgattttgcaccccctcttttttt-gaacgattttgcacctcatcttttgccaattgtgt 205785  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    |||||||||||||||  | ||||||| ||||| ||||| |||||| || ||||||||||    
T  205786 tttgttcaaaatcataatcaaaagaggggaaatggggcaaaagatgggatgcaaaatcg 205844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 474 - 630
Target Start/End: Original strand, 6609 - 6763
Alignment:
Q  474 cttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnngagcgattttgcaccccatcttttatcaattgtgtt 573  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||| |||| | ||         ||||||||||||||| |||||||  ||| ||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacctc-tctttttttt-agcgattttgcaccctatcttttgccaactgtgtt 6706  T
Q  574 ttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatc 630  Q
    ||||||||||||||| ||||||||| || |||||||| | |||| ||||||||||||    
T  6707 ttgttcaaaatcatcattaaaagagggggaaaggggcaagagatggggtgcaaaatc 6763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 513
Target Start/End: Complemental strand, 6928 - 6888
Alignment:
Q  472 agcttaattgcacttttcccccctatcttttgctaattgtgc 513  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  6928 agcttaattgcacttt-cccccctatcttttgccaattgtgc 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 55; Significance: 3e-22; HSPs: 3)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 475 - 634
Target Start/End: Complemental strand, 1834 - 1674
Alignment:
Q  475 ttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatcnnnnnnnn--gagcgattttgcaccccatcttttatcaattgtgt 572  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||| |||| | ||          |||||||||||||||| |||||||  ||| |||||    
T  1834 ttaattgcacttttccccc-tatcttttgtttattgtgcgattttgcacctcctcttttctttttgagcgattttgcaccctatcttttgccaactgtgt 1736  T
Q  573 tttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctc 634  Q
    |||||| ||||||||| ||||||||| ||||| ||||| ||| || ||||||||||||||||    
T  1735 tttgtttaaaatcatcattaaaagaggggaaatggggcaaaatatggggtgcaaaatcgctc 1674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 683
Target Start/End: Complemental strand, 1656 - 1627
Alignment:
Q  654 gtgcaaaatcgcacaattagcaaaaagata 683  Q
    ||||||||||||||||||||||||||||||    
T  1656 gtgcaaaatcgcacaattagcaaaaagata 1627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 1512 - 1567
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||||| || | |||||||||| ||||||| |||||| |||||||||    
T  1512 gcttaattgcactttttcctc-tatcttttgccaattgtgtgattttgcaccccatc 1567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 631
Target Start/End: Original strand, 10690 - 10783
Alignment:
Q  538 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||  |||||   ||  |||||| |||||||||||||    
T  10690 gagcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagatgggaaagatggaaaaagatggggtgcaaaatcg 10783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 6153 - 6208
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  6153 gcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccat 6208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 6848 - 6793
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||    
T  6848 gcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccat 6793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 631
Target Start/End: Original strand, 7494 - 7585
Alignment:
Q  540 gcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcgttaaaagagaggaaaaggggctaaagatagggtgcaaaatcg 631  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||| |||||||||  |||| ||||| ||| || |  ||||||||||    
T  7494 gcgattttgcaccccatcgtttgccaattgtgttttgttcaaaatcatcattaaaagaggagaaatggggcaaaatatggaatgcaaaatcg 7585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 7456 - 7511
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccatc 529  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||    
T  7456 gcttaattgcactttttcccc-tatcttttgctaattatgcgattttgcaccccatc 7511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 519
Target Start/End: Complemental strand, 7652 - 7607
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||    
T  7652 gcttaattgcactttttcccc-tatcttttgctaattgtgcgatttt 7607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 38748 - 38693
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||||    
T  38748 gcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccat 38693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 528
Target Start/End: Complemental strand, 185327 - 185272
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||| ||||||  ||||| |||||||||||||| ||||||||    
T  185327 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccat 185272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 10013 - 10059
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgatttt 519  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||    
T  10013 gcttaattgcacttttgccccctatcttttgccaattgtacgatttt 10059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 9906 - 9959
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||    
T  9906 gcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccc 9959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 524
Target Start/End: Original strand, 72966 - 73018
Alignment:
Q  472 agcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacc 524  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||||| ||||    
T  72966 agcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcacc 73018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 331 - 386
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacaccccat 528  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||| || |||||    
T  331 gcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccat 386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 50559 - 50507
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||||||||| |||  ||||| |||||||||||||| ||||||    
T  50559 gcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccc 50507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 411924 - 411976
Alignment:
Q  473 gcttaattgcacttttcccccctatcttttgctaattgtgcgattttacacccc 526  Q
    ||||||||||||||| |||| ||||||||||  |||||||||||||| ||||||    
T  411924 gcttaattgcactttacccc-ctatcttttgtcaattgtgcgattttgcacccc 411976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 517
Target Start/End: Original strand, 412049 - 412090
Alignment:
Q  477 aattgcacttttcccccctatc-ttttgctaattgtgcgatt 517  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  412049 aattgcacttttgccccctatctttttgctaattgtgcgatt 412090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University