View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5870-Insertion-4 (Length: 803)

Name: NF5870-Insertion-4
Description: NF5870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5870-Insertion-4
NF5870-Insertion-4
[»] scaffold0154 (2 HSPs)
scaffold0154 (9-803)||(24519-25296)
scaffold0154 (9-203)||(15099-15293)
[»] scaffold0189 (1 HSPs)
scaffold0189 (9-185)||(61-237)
[»] chr8 (26 HSPs)
chr8 (632-799)||(27110592-27110758)
chr8 (632-799)||(23230439-23230605)
chr8 (632-715)||(31013780-31013865)
chr8 (632-722)||(25191268-25191360)
chr8 (743-799)||(36948566-36948623)
chr8 (632-708)||(10377492-10377570)
chr8 (632-784)||(28897506-28897657)
chr8 (632-715)||(37971090-37971172)
chr8 (632-714)||(3673241-3673324)
chr8 (743-799)||(7883369-7883425)
chr8 (743-799)||(14545030-14545087)
chr8 (632-714)||(17693824-17693907)
chr8 (743-799)||(20553374-20553431)
chr8 (743-799)||(20559874-20559931)
chr8 (743-799)||(20571436-20571493)
chr8 (743-795)||(24186791-24186844)
chr8 (632-677)||(27498584-27498629)
chr8 (743-799)||(40619201-40619258)
chr8 (632-677)||(45446060-45446105)
chr8 (745-799)||(3240282-3240337)
chr8 (632-715)||(8980992-8981077)
chr8 (632-715)||(20553454-20553539)
chr8 (743-783)||(29938018-29938059)
chr8 (634-675)||(36948688-36948729)
chr8 (743-799)||(40211433-40211490)
chr8 (744-796)||(44091879-44091932)
[»] chr5 (28 HSPs)
chr5 (632-794)||(7036020-7036181)
chr5 (632-799)||(13007021-13007187)
chr5 (632-799)||(34945214-34945380)
chr5 (641-799)||(6216696-6216857)
chr5 (632-798)||(26878210-26878374)
chr5 (632-799)||(6012268-6012434)
chr5 (632-715)||(38597590-38597675)
chr5 (743-799)||(8096628-8096685)
chr5 (743-799)||(11977067-11977124)
chr5 (737-799)||(14726592-14726655)
chr5 (743-793)||(15571387-15571438)
chr5 (743-799)||(9113855-9113912)
chr5 (743-799)||(10332682-10332739)
chr5 (743-799)||(26825332-26825389)
chr5 (632-799)||(11074030-11074196)
chr5 (632-707)||(38007150-38007227)
chr5 (633-707)||(25979951-25980027)
chr5 (641-715)||(31391968-31392044)
chr5 (632-715)||(7929991-7930072)
chr5 (632-675)||(13421736-13421779)
chr5 (632-715)||(9113936-9114021)
chr5 (632-691)||(26825221-26825282)
chr5 (743-785)||(28386840-28386882)
chr5 (762-799)||(11867590-11867627)
chr5 (632-677)||(11977188-11977233)
chr5 (746-786)||(14082513-14082554)
chr5 (743-799)||(24229915-24229972)
chr5 (743-799)||(38597698-38597755)
[»] chr4 (35 HSPs)
chr4 (632-799)||(4142885-4143050)
chr4 (632-799)||(2520590-2520756)
chr4 (632-799)||(22610997-22611162)
chr4 (632-790)||(43510012-43510169)
chr4 (632-799)||(19853642-19853807)
chr4 (741-798)||(5119259-5119317)
chr4 (632-799)||(13633927-13634094)
chr4 (632-799)||(54021674-54021840)
chr4 (632-799)||(26633801-26633966)
chr4 (632-799)||(22558594-22558761)
chr4 (634-722)||(48257653-48257743)
chr4 (632-799)||(53810841-53811007)
chr4 (743-799)||(21686371-21686428)
chr4 (632-715)||(35348119-35348204)
chr4 (632-696)||(9165273-9165339)
chr4 (644-722)||(29121882-29121961)
chr4 (632-683)||(51024706-51024757)
chr4 (632-715)||(10496155-10496240)
chr4 (632-799)||(29961055-29961225)
chr4 (632-677)||(26091164-26091209)
chr4 (743-799)||(35348227-35348283)
chr4 (743-799)||(45418448-45418505)
chr4 (743-799)||(47158149-47158206)
chr4 (746-793)||(26091050-26091098)
chr4 (743-798)||(40066186-40066242)
chr4 (651-715)||(9178189-9178255)
chr4 (739-785)||(56040788-56040835)
chr4 (743-799)||(9713829-9713887)
chr4 (746-799)||(17949454-17949508)
chr4 (746-799)||(17953306-17953360)
chr4 (632-715)||(22300658-22300743)
chr4 (638-710)||(21662304-21662377)
chr4 (638-710)||(21671068-21671141)
chr4 (632-677)||(33920865-33920910)
chr4 (746-790)||(52978749-52978794)
[»] scaffold0884 (1 HSPs)
scaffold0884 (632-799)||(2102-2268)
[»] chr6 (18 HSPs)
chr6 (632-799)||(33053298-33053464)
chr6 (632-799)||(12170289-12170455)
chr6 (632-796)||(605998-606161)
chr6 (632-715)||(32328794-32328879)
chr6 (632-799)||(68131-68296)
chr6 (632-715)||(3913785-3913869)
chr6 (632-714)||(32059703-32059787)
chr6 (743-799)||(32327347-32327404)
chr6 (743-799)||(34018463-34018520)
chr6 (744-799)||(3913704-3913760)
chr6 (632-785)||(29255586-29255738)
chr6 (753-799)||(127583-127630)
chr6 (632-799)||(23128412-23128578)
chr6 (743-795)||(11321603-11321656)
chr6 (637-715)||(29320073-29320153)
chr6 (743-799)||(7515331-7515388)
chr6 (743-795)||(26588602-26588655)
chr6 (743-799)||(30493432-30493489)
[»] chr3 (44 HSPs)
chr3 (632-799)||(10232863-10233029)
chr3 (632-799)||(47895944-47896110)
chr3 (632-799)||(21431418-21431583)
chr3 (632-799)||(48650864-48651031)
chr3 (632-795)||(52923251-52923411)
chr3 (632-799)||(9797659-9797823)
chr3 (632-799)||(9998259-9998426)
chr3 (632-799)||(10108031-10108195)
chr3 (632-714)||(32701291-32701375)
chr3 (632-722)||(40487118-40487210)
chr3 (632-799)||(6954826-6954992)
chr3 (632-715)||(33579661-33579746)
chr3 (632-799)||(45568574-45568740)
chr3 (632-723)||(38545628-38545721)
chr3 (632-715)||(40556504-40556589)
chr3 (743-799)||(10229378-10229435)
chr3 (632-714)||(26276005-26276089)
chr3 (632-798)||(35865066-35865229)
chr3 (743-799)||(36910771-36910828)
chr3 (743-794)||(20609025-20609077)
chr3 (651-799)||(54148800-54148947)
chr3 (746-799)||(9319961-9320015)
chr3 (632-678)||(43488847-43488893)
chr3 (632-715)||(47042263-47042348)
chr3 (743-799)||(29921954-29922011)
chr3 (743-799)||(29971107-29971164)
chr3 (743-799)||(33579769-33579826)
chr3 (743-799)||(36461561-36461618)
chr3 (743-799)||(43488720-43488777)
chr3 (744-799)||(50194414-50194470)
chr3 (651-799)||(23800039-23800188)
chr3 (632-691)||(10229267-10229328)
chr3 (743-799)||(18010920-18010978)
chr3 (746-799)||(20465100-20465154)
chr3 (655-714)||(20609109-20609170)
chr3 (743-799)||(7449032-7449089)
chr3 (743-799)||(7457174-7457231)
chr3 (743-799)||(7887540-7887596)
chr3 (747-799)||(12947411-12947464)
chr3 (743-799)||(20987929-20987986)
chr3 (743-799)||(22290839-22290896)
chr3 (743-799)||(31271937-31271994)
chr3 (754-798)||(40556624-40556669)
chr3 (743-799)||(53508122-53508179)
[»] chr2 (36 HSPs)
chr2 (632-798)||(7646275-7646441)
chr2 (632-799)||(4098906-4099072)
chr2 (632-799)||(4778556-4778722)
chr2 (632-799)||(9169388-9169553)
chr2 (632-799)||(7448051-7448216)
chr2 (632-795)||(11985365-11985526)
chr2 (743-799)||(36691786-36691842)
chr2 (632-715)||(18763271-18763356)
chr2 (632-799)||(43397251-43397415)
chr2 (743-799)||(29279701-29279758)
chr2 (743-799)||(31128910-31128967)
chr2 (632-799)||(27097537-27097701)
chr2 (632-715)||(35220134-35220216)
chr2 (632-715)||(7678089-7678174)
chr2 (632-799)||(8809085-8809250)
chr2 (743-799)||(4041725-4041782)
chr2 (632-799)||(31788259-31788425)
chr2 (746-799)||(4904276-4904330)
chr2 (632-799)||(5427998-5428164)
chr2 (632-715)||(36943335-36943420)
chr2 (743-799)||(19062483-19062540)
chr2 (633-715)||(37876809-37876893)
chr2 (651-799)||(38444989-38445135)
chr2 (743-798)||(25509196-25509252)
chr2 (632-722)||(39311053-39311144)
chr2 (632-715)||(12677507-12677592)
chr2 (632-702)||(1421474-1421546)
chr2 (743-799)||(4264384-4264441)
chr2 (743-803)||(28871889-28871950)
chr2 (743-799)||(29173850-29173907)
chr2 (630-715)||(17994927-17995014)
chr2 (660-717)||(30400248-30400307)
chr2 (632-715)||(4904347-4904432)
chr2 (743-799)||(6359008-6359065)
chr2 (743-795)||(12648059-12648112)
chr2 (765-798)||(42698830-42698863)
[»] chr7 (23 HSPs)
chr7 (632-799)||(34899737-34899900)
chr7 (632-799)||(48061217-48061384)
chr7 (632-799)||(12141437-12141604)
chr7 (632-799)||(40992977-40993143)
chr7 (632-799)||(9450267-9450433)
chr7 (634-799)||(39171721-39171886)
chr7 (632-799)||(37837589-37837754)
chr7 (743-799)||(47590215-47590272)
chr7 (632-796)||(42978403-42978567)
chr7 (632-799)||(30756949-30757115)
chr7 (632-792)||(19404892-19405050)
chr7 (632-799)||(48316942-48317108)
chr7 (743-794)||(46699948-46700000)
chr7 (632-715)||(8013676-8013761)
chr7 (743-796)||(38051201-38051255)
chr7 (743-799)||(13797062-13797119)
chr7 (632-694)||(25287413-25287477)
chr7 (743-799)||(26610875-26610932)
chr7 (743-799)||(28476124-28476180)
chr7 (743-799)||(41553568-41553625)
chr7 (743-799)||(41553913-41553970)
chr7 (743-799)||(41554258-41554315)
chr7 (682-715)||(49149042-49149075)
[»] chr1 (36 HSPs)
chr1 (632-722)||(34878475-34878567)
chr1 (632-800)||(29738765-29738932)
chr1 (632-794)||(51916787-51916948)
chr1 (632-799)||(7337793-7337959)
chr1 (743-799)||(13144942-13144999)
chr1 (632-722)||(10776664-10776756)
chr1 (743-799)||(23291773-23291830)
chr1 (632-798)||(31983976-31984141)
chr1 (632-709)||(35484595-35484674)
chr1 (743-798)||(36894373-36894428)
chr1 (743-796)||(26535299-26535353)
chr1 (743-799)||(1742185-1742242)
chr1 (743-799)||(8212040-8212097)
chr1 (743-799)||(11462577-11462634)
chr1 (743-799)||(21947748-21947805)
chr1 (743-799)||(32394903-32394960)
chr1 (743-799)||(35462167-35462224)
chr1 (634-722)||(3228068-3228158)
chr1 (632-799)||(5983632-5983799)
chr1 (632-696)||(41176978-41177044)
chr1 (632-715)||(45415355-45415440)
chr1 (743-799)||(15492195-15492252)
chr1 (653-715)||(15836010-15836074)
chr1 (743-799)||(27456446-27456503)
chr1 (747-799)||(27580257-27580310)
chr1 (743-799)||(31317655-31317712)
chr1 (743-799)||(31918894-31918951)
chr1 (632-799)||(14872435-14872602)
chr1 (743-793)||(15435009-15435060)
chr1 (656-714)||(50377148-50377207)
chr1 (656-799)||(18939142-18939282)
chr1 (743-783)||(1602020-1602061)
chr1 (632-714)||(15435084-15435168)
chr1 (743-799)||(35484521-35484578)
chr1 (743-799)||(37720252-37720308)
chr1 (743-799)||(47132804-47132861)
[»] scaffold0127 (1 HSPs)
scaffold0127 (632-799)||(15285-15450)
[»] scaffold0088 (1 HSPs)
scaffold0088 (632-799)||(50579-50745)
[»] scaffold0262 (1 HSPs)
scaffold0262 (632-799)||(1948-2113)
[»] scaffold0026 (1 HSPs)
scaffold0026 (632-799)||(71994-72160)
[»] scaffold0445 (1 HSPs)
scaffold0445 (633-799)||(1138-1302)
[»] scaffold0121 (1 HSPs)
scaffold0121 (634-798)||(31401-31565)
[»] scaffold0603 (1 HSPs)
scaffold0603 (656-799)||(7534-7674)
[»] scaffold0136 (2 HSPs)
scaffold0136 (743-799)||(10171-10228)
scaffold0136 (743-799)||(37948-38005)
[»] scaffold0017 (1 HSPs)
scaffold0017 (743-799)||(32878-32935)
[»] scaffold0554 (1 HSPs)
scaffold0554 (631-715)||(10671-10755)
[»] scaffold0492 (1 HSPs)
scaffold0492 (653-715)||(12730-12794)
[»] scaffold0219 (1 HSPs)
scaffold0219 (632-677)||(15089-15134)
[»] scaffold0618 (1 HSPs)
scaffold0618 (744-796)||(7978-8031)
[»] scaffold0009 (1 HSPs)
scaffold0009 (743-799)||(58210-58267)


Alignment Details
Target: scaffold0154 (Bit Score: 483; Significance: 0; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 9 - 803
Target Start/End: Original strand, 24519 - 25296
Alignment:
Q  9 tctttgacaagaaccaagttgatgaagaacatgtttctcgtttttgggtggagacgaggttgaaacctcggatgttttgacggctgtcggggttgaatat 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24519 tctttgacaagaaccaagttgatgaagaacatgtttctcgtttttgagtgaagacgaggttgaaacctcggatgttttgacggctgtcggggttgaatat 24618  T
Q  109 gaattggctttaggtatagctaaattaacagttgcaaagcttcctcttccaactgtttttcctcgtacccaatccatctgagaattgttgttttggtttc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24619 gaattggctttaggtatagctaaattaacagttgcaaagcttcctcttccaactgtttttcctcgtacccaatccatctgagaattgttgttttggtttc 24718  T
Q  209 tatgtagattttgttgtttgctttgtgaagaagaaagaaaacgcaaagaagagagaacaactaagtgtggctggcttccaagaatcatgaagccctttcc 308  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24719 tatgtagattttgttgtttgctttgcgaagaagaaagaaaacgcaaagaagagagaacaactaagtgtggctggcttccaagaatcatgaagccctttcc 24818  T
Q  309 tttatatatgggggaaacaaatctactagttgatatttaatgacgtaatcaataaggtatcttgagaaaatnnnnnnnnttattcccactccgaaaagaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||        ||||| ||||||| |||||||    
T  24819 tttatatatgggggaaacaaatctactagttgatatttaatgacgtaagcaataaggtatcttgggaaaataaaaaaaattatttccactccaaaaagaa 24918  T
Q  409 ttgatttgattaaagaacaagggggaatgcattcaatagccggacctagnnnnnnngtttcatgtttggttaagcaacta--aaaaattacgttttgaaa 506  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||||||||||||| |||||  |||||||| ||||| ||     
T  24919 ttgatttgattaaagaacaagggggaatgcattcaacagccggacctagtttttttgtttcatgtttggttaaggaactaataaaaattaagttttaaa- 25017  T
Q  507 taaaggtaacattttttatgctttcgtagaattgacggcacaagttcttaatacttattatatttgactctttaac-catgtcttgggggcattggtaaa 605  Q
                     ||||||| ||||||||||  |||  ||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||    
T  25018 -----------------atgcttttgtagaattgagagca-tagttcttaatacttattatatttgactctttaactaatgtcctgggggcatcggtaaa 25099  T
Q  606 cattaccnnnnnnnnnnnnnnnnnacagaaactccaacttttctttaaactttctttctccttcattcatcggagaggtggttttaagtcactttttgac 705  Q
    |||||||                 | ||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  25100 cattacctttttctatttttttttagagaaacttcaacttttctctaaactttctttctctttcattcatcggaggggtggttttaagtcactttttgac 25199  T
Q  706 ctaaaatcactcatctatnnnnnnntttcccctcttcttctttcaatctaaataagtggtttcatatatatcaagtttttccttttgtgtttttatgt 803  Q
     |||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  25200 ttaaaatcactcatctatatcttttttttccctcttcttctttcaatctaaataagtggtttcatatatatcaagtttttccatttgt-tttttatgt 25296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 15099 - 15293
Alignment:
Q  9 tctttgacaagaaccaagttgatgaagaacatgtttctcgtttttgggtggagacgaggttgaaacctcggatgttttgacggctgtcggggttgaatat 108  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || |||| |    
T  15099 tctttgacaagaaccaagttgatgaagaacatatttctcgtttttgagtgaagacgaggttgaaacctcggatgttttgacggctgtcggagtggaattt 15198  T
Q  109 gaattggctttaggtatagctaaattaacagttgcaaagcttcctcttccaactgtttttcctcgtacccaatccatctgagaattgttgttttg 203  Q
    ||||||  ||| |||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||   |||||||||||||    
T  15199 gaattgcttttgggtataactaaattaacagttgcaaagcttcctcttccaacagtttctcctcgtacccaatccatcttgcaattgttgttttg 15293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 237 - 61
Alignment:
Q  9 tctttgacaagaaccaagttgatgaagaacatgtttctcgtttttgggtggagacgaggttgaaacctcggatgttttgacggctgtcggggttgaatat 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  237 tctttgacaagaaccaagttgatgaagaacatgtttctcgtttttgagtgaagacgaggttgaaacctcggatgttttgacggctgtcggagttgaatat 138  T
Q  109 gaattggctttaggtatagctaaattaacagttgcaaagcttcctcttccaactgtttttcctcgtacccaatccat 185  Q
    |||||  |||| |||||| ||||||||||||||||||| || ||||||||||| | || ||||||||||||||||||    
T  137 gaatttcctttgggtataactaaattaacagttgcaaaactacctcttccaacagcttctcctcgtacccaatccat 61  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 1e-31; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 27110758 - 27110592
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggaga--ggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| |||  |||||||||| |||| ||||||| |||||||||| ||||||           
T  27110758 agaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatcacacatcta---catc 27110662  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggt-ttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||   ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  27110661 ttttttactctt-ttctttcaatctaaataagtggtcttcacatatatcaagtttttccttttgtgttttt 27110592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 23230439 - 23230605
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagaggtg-gttttaagtcactttttgacctaaaatcactcatctatnnnnnnn 730  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||  || | | |||||| |||| ||||||||| |||||||| | ||||            
T  23230439 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtgttttaggtcaatttttgaccaaaaatcacccctcta-catcttt 23230537  T
Q  731 tttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||| ||  |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||    
T  23230538 tttcccctttt--tctttcaatctaaataagtggttttcatatctatcaagttttttcttttgtgttttt 23230605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 31013865 - 31013780
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| ||||||    
T  31013865 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcac 31013780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 722
Target Start/End: Complemental strand, 25191360 - 25191268
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatcta 722  Q
    |||||||||||||| ||| ||||||||||||||||||  ||||||  ||||||||| ||||| |||| ||||||||||| |||||| ||||||    
T  25191360 agaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcacccatcta 25191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 36948623 - 36948566
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  36948623 ttctttcaatctaaataagtggttttcatatatatcaaatttttccttttgtgttttt 36948566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 632 - 708
Target Start/End: Original strand, 10377492 - 10377570
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgaccta 708  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| |||||||||||    
T  10377492 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgaccta 10377570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 632 - 784
Target Start/End: Original strand, 28897506 - 28897657
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| |||||| | |||||||| || |||| |||||||| |||  ||| ||||||||||||||| ||||||| |||||||||| | ||||           
T  28897506 agaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatctaaaatcacccctcta---catc 28897602  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttt 784  Q
     |||  |||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  28897603 ttttttcctctt-ttctttcaatctaaataagtggttttcatgtatatcaagtttt 28897657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 37971090 - 37971172
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| |||| ||||||||| ||||||||||| |||  ||||||||| |||| ||||||||||| ||||||    
T  37971090 agaaactccaacttctctctaaattttctttcttcttcattcatc-gaggagtggttttaggtcattttttgacctagaatcac 37971172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 632 - 714
Target Start/End: Original strand, 3673241 - 3673324
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatca 714  Q
    ||||||| |||||| ||| |||||||||||||||||| |||||||| |||||  |||||||| |||| ||||||||||| |||||    
T  3673241 agaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtca-tttttgacctagaatca 3673324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 7883425 - 7883369
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  7883425 ttctttcaatctaaataagtggttttcacatctatcaagttttt-cttttgtgttttt 7883369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 14545087 - 14545030
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||| |||||    
T  14545087 ttctttcaatctaaataagtggttttcacatatatcaaaattttccttttgtattttt 14545030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 714
Target Start/End: Complemental strand, 17693907 - 17693824
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcat--cggagaggtggttttaagtcactttttgacctaaaatca 714  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||   |||| ||| |||||| |||| ||||||||||| |||||    
T  17693907 agaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtca-tttttgacctagaatca 17693824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 20553431 - 20553374
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || || ||| ||||||||||||||||||||||    
T  20553431 ttctttcaatctaaataagtgattttcacatctatgaagtttttccttttgtgttttt 20553374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 20559931 - 20559874
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || || |||||||||||||||||||| |||||    
T  20559931 ttctttcaatctaaataagtgattttcacatctatcaagtttttccttttgtattttt 20559874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 20571493 - 20571436
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || || |||||||||||||||||||| |||||    
T  20571493 ttctttcaatctaaataagtgattttcacatctatcaagtttttccttttgtattttt 20571436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 795
Target Start/End: Complemental strand, 24186844 - 24186791
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgt 795  Q
    |||||| |||||||||||||| ||| |||||||||||||||||| |||||||||    
T  24186844 ttctttaaatctaaataagtgattttcatatatatcaagtttttgcttttgtgt 24186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 677
Target Start/End: Complemental strand, 27498629 - 27498584
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg 677  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||    
T  27498629 agaaacttcaacttatctttaagctttctttctccttcattcatcg 27498584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 40619258 - 40619201
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||| |||||||||||||||| ||| || |||||||||||||||| ||||||||||||    
T  40619258 ttctatcaatctaaataagtgattttcacatatatcaagtttttctttttgtgttttt 40619201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 677
Target Start/End: Complemental strand, 45446105 - 45446060
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg 677  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||    
T  45446105 agaaactccaacttctctctaaactttctttctccttcgttcatcg 45446060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 745 - 799
Target Start/End: Original strand, 3240282 - 3240337
Alignment:
Q  745 ctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||| |||| | ||||||||||| ||| |||||||||||||    
T  3240282 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttt 3240337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 8980992 - 8981077
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| |||  |||| ||||| |||| || |||  ||| |||||||||| |||| ||||||||||||||||||    
T  8980992 agaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcac 8981077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 20553539 - 20553454
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||| ||||||| |||||||||||| ||||| |||| ||||||  |||| ||||||||||  ||| |||| |||||| ||||||    
T  20553539 agaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaatcac 20553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 783
Target Start/End: Original strand, 29938018 - 29938059
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagttt 783  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  29938018 ttctttcaacctaaataagtggttttcatatatatcaagttt 29938059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 634 - 675
Target Start/End: Complemental strand, 36948729 - 36948688
Alignment:
Q  634 aaactccaacttttctttaaactttctttctccttcattcat 675  Q
    ||||| |||||| |||||||||||||||||||||| ||||||    
T  36948729 aaacttcaacttctctttaaactttctttctcctttattcat 36948688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 40211490 - 40211433
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||| || ||||| || |||||||| ||| |||||||||||||    
T  40211490 ttctttcaatctaaataagcggttttcacatctatcaagtattttcttttgtgttttt 40211433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 744 - 796
Target Start/End: Complemental strand, 44091932 - 44091879
Alignment:
Q  744 tctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgtt 796  Q
    |||||| |||||||| |||||||| || || |||||||||||||||||||||||    
T  44091932 tctttcgatctaaattagtggttttcacatctatcaagtttttccttttgtgtt 44091879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 632 - 794
Target Start/End: Original strand, 7036020 - 7036181
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||  || | |||||||||| |||| |||||||||||||||||||||||||           
T  7036020 agaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgacctaaaatcactcatcta---catc 7036116  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtg 794  Q
     |||  |||||| |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||    
T  7036117 ttttttcctctt-ttctttcaatctaaataagtggttttcacatatatcaatttttttcttttgtg 7036181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 13007021 - 13007187
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  ||||||||||||||| |||| ||||||||||| |||||| | ||||           
T  13007021 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctcta-cacctt 13007119  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||   | | |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  13007120 ttttcc---cattttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 13007187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 34945214 - 34945380
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||||||| || ||| ||||||||||||||||||| ||||||| ||| |  |||||||| |||| ||||||||||| |||||| | ||||           
T  34945214 agaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatcacccttcta-catctt 34945312  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| |||||   |||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  34945313 ttttccccttttctt---tcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 34945380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 641 - 799
Target Start/End: Original strand, 6216696 - 6216857
Alignment:
Q  641 aacttttctttaaactttctttctccttcattcatcggaga--ggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnntttcccct 738  Q
    ||||| ||| |||||||| |||||| ||| |||||||  ||  |||||||||| |||| | |||||||||||||||  ||||||        ||||||||    
T  6216696 aacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatcatccatcta-catttgttttcccct 6216794  T
Q  739 cttctt-ctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     | ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  6216795 ttgctttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt 6216857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 632 - 798
Target Start/End: Complemental strand, 26878374 - 26878210
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||| ||| |||||  | ||| |          
T  26878374 agaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaatca--cctctctacatct 26878278  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgtttt 798  Q
     ||||||| ||| |||||||||||||||||||||| ||||| ||| ||||||||||| ||||||| ||||    
T  26878277 ttttcccc-ctt-ttctttcaatctaaataagtggttttcacataaatcaagttttttcttttgtttttt 26878210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 6012434 - 6012268
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcat--cggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||   |||| |||||||||| |||| |||||||| || |||||| | ||||           
T  6012434 agaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacccctctacatcttt 6012335  T
Q  730 ntttcccctcttcttctttcaatctaaataagtg-gtttcatatatatcaagtttttccttttgtgttttt 799  Q
     ||||||    | |||||||||||||||||||||  |||||  | ||||||||||||||||||||||||||    
T  6012334 ttttccc----ttttctttcaatctaaataagtgtttttcacgtctatcaagtttttccttttgtgttttt 6012268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 38597590 - 38597675
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| || | ||||||||||| ||||||    
T  38597590 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgacctagaatcac 38597675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 8096685 - 8096628
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  8096685 ttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttt 8096628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 11977124 - 11977067
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  11977124 ttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttt 11977067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 737 - 799
Target Start/End: Complemental strand, 14726655 - 14726592
Alignment:
Q  737 ctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||    
T  14726655 ctctttttctttcaatctaactaagtggttttcatatatatcaagttttttcttatgtgttttt 14726592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 743 - 793
Target Start/End: Original strand, 15571387 - 15571438
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgt 793  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  15571387 ttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgt 15571438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 9113912 - 9113855
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||| |||||||||||||||||| || || ||||||||||||||||||||||||||    
T  9113912 ttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 9113855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 10332739 - 10332682
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||    
T  10332739 ttctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgttttt 10332682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 26825332 - 26825389
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
T  26825332 ttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt 26825389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 11074196 - 11074030
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggaga-ggtggttttaagtcactttttgacctaaaatcactca-tctatnnnn 727  Q
    |||||||||||||||||| |||||||||||||||| || ||||||  ||||| |||||||||| || | ||||||||||| ||||| ||| ||||         
T  11074196 agaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggtta-tttttgacctagaatca-tcactctacgtct 11074099  T
Q  728 nnntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
       ||||||    | |||||| ||||||||||||||| ||||| || |||||||||||||||||||| |||||    
T  11074098 ttttttccc----ttttcttttaatctaaataagtggctttcacatctatcaagtttttccttttgtattttt 11074030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 707
Target Start/End: Original strand, 38007150 - 38007227
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacct 707  Q
    |||||||| | ||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||    
T  38007150 agaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacct 38007227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 707
Target Start/End: Original strand, 25979951 - 25980027
Alignment:
Q  633 gaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacct 707  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||||  |||  |||||||| | |||| ||||||||||    
T  25979951 gaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacct 25980027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 641 - 715
Target Start/End: Complemental strand, 31392044 - 31391968
Alignment:
Q  641 aacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||| ||| |||||||||||||||| || |||||||  ||| |||||||||| |||| ||||||||||| ||||||    
T  31392044 aacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcac 31391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 7929991 - 7930072
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||||||| || ||| |||||||||||||||||||||  |  |||| |||| ||||| |||| ||||||||||| ||||||    
T  7929991 agaaactccaaattctctctaaactttctttctccttcatcaa--ggaggggtgattttaggtcaatttttgacctagaatcac 7930072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Original strand, 13421736 - 13421779
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcat 675  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||    
T  13421736 agaaacttcaacttctctttaaactttctttcttcttcattcat 13421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 9114021 - 9113936
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||| ||||| ||| ||||||||||||||| ||| ||||||  |||| |||| ||||| |||| ||||| ||||| ||||||    
T  9114021 agaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcac 9113936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 691
Target Start/End: Original strand, 26825221 - 26825282
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggtttta 691  Q
    ||||||||||| || ||| ||||||||||||||||||| ||||||  |||| ||||||||||    
T  26825221 agaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggtttta 26825282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 743 - 785
Target Start/End: Original strand, 28386840 - 28386882
Alignment:
Q  743 ttctttcaatctaaataagtggtttcatatatatcaagttttt 785  Q
    ||||||||||||||  ||||||||||| |||||||||||||||    
T  28386840 ttctttcaatctaaccaagtggtttcacatatatcaagttttt 28386882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 762 - 799
Target Start/End: Original strand, 11867590 - 11867627
Alignment:
Q  762 tggtttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  11867590 tggtttcaaatatatcaaatttttccttttgtgttttt 11867627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 677
Target Start/End: Complemental strand, 11977233 - 11977188
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg 677  Q
    |||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  11977233 agaaactctaacttctctctaaactttctttctccttcgttcatcg 11977188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 786
Target Start/End: Complemental strand, 14082554 - 14082513
Alignment:
Q  746 tttcaatctaaataagtgg-tttcatatatatcaagtttttc 786  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  14082554 tttcaatctaaataagtggctttcacatatatcaagtttttc 14082513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 24229972 - 24229915
Alignment:
Q  743 ttctttcaatctaaataagtg-gtttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||  ||||| || ||||||||| || |||||||||||||    
T  24229972 ttctttcaatctaaataagtgattttcacatctatcaagttgtttcttttgtgttttt 24229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 38597698 - 38597755
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||| ||| || || ||||||||||||||||||||| ||||    
T  38597698 ttctttcaatttaaataagtgattttcacatctatcaagtttttccttttgtgctttt 38597755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 4e-25; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 4143050 - 4142885
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||  |||||||  ||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  4143050 agaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta-catctt 4142952  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggtttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| |||||   |||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  4142951 ttttccccttttctt---tcaatctaaataagtgttttcacatctatcaagtttttccttttgtgttttt 4142885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 2520590 - 2520756
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  2520590 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta-catctt 2520688  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | ||| |||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  2520689 ttttcccc---ttttcgttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 2520756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 22610997 - 22611162
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||| ||  |||| |||||||||| |||| ||||||||||| |||||| ||||||           
T  22610997 agaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtca-tttttgacctagaatcacccatcta-catctt 22611094  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | |||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||    
T  22611095 ttttcccc---ttttctttcaatctaaataagtggttttcacatctatcaagtttatccttttgtgttttt 22611162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 790
Target Start/End: Original strand, 43510012 - 43510169
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggaga--ggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| |||||| ||||||||||||| ||||||||| ||||||| |||  |||||||||| |||| ||||||||||| |||||||| ||||           
T  43510012 agaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctctacatcttt 43510111  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttt 790  Q
     ||||||    | |||||||||||||||||||||| ||||| || |||||||||||||||||    
T  43510112 ttttccc----ttttctttcaatctaaataagtggctttcacatttatcaagtttttccttt 43510169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 19853807 - 19853642
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||  |||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  19853807 agaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtca-tttttgacctagaatcacccctcta-catctt 19853710  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| ||||||   |||||||||||||||| ||||| || |||||||||||| ||||| |||||||    
T  19853709 ttttccccttttcttc---caatctaaataagtggttttcacatctatcaagttttttcttttttgttttt 19853642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 741 - 798
Target Start/End: Original strand, 5119259 - 5119317
Alignment:
Q  741 tcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgtttt 798  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  5119259 tcttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgtttt 5119317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 13633927 - 13634094
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||||||||||||||  ||||||  ||| |||||||||| |||| |||||||| || |||||| | ||||           
T  13633927 agaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtca-tttttgacatagaatcacccctcta--catct 13634023  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     || |||| | | |||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  13634024 tttccccccccttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 13634094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 54021674 - 54021840
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg-gagag-gtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| ||| || ||| |||||||||||||| |||||||||||| | ||| ||||||||| |||| |||||||| ||||||||  | ||||           
T  54021674 agaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatccctcta---catc 54021770  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||  |||||| ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  54021771 ttttttcctctt-ttctttcaatctaaataagtggttttcacatatatccagtttttccttttgtgttttt 54021840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 26633966 - 26633801
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||||||||| |||| ||||| |  ||| |||||| ||| |||| ||||||||||| |||||| |  ||||          
T  26633966 agaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatcaccc--ctatacatct 26633869  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||  |||| |||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  26633868 ttttcc--tctt-ttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 26633801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 22558761 - 22558594
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||||||| || ||| ||||||||||||||||||| ||||| |  ||| |||||||||| |||| |||||||| || ||||||   ||||           
T  22558761 agaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacctctcta-catctt 22558663  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| ||  ||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  22558662 ttttcccctttt--tctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 22558594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 634 - 722
Target Start/End: Complemental strand, 48257743 - 48257653
Alignment:
Q  634 aaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatcta 722  Q
    |||||||||||| ||||||||||||||||||| ||| | ||||  |||| |||||||||| |||| ||||||||||| |||||| ||||||    
T  48257743 aaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaatcacccatcta 48257653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 53810841 - 53811007
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||| ||| ||| ||||||||||| ||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  53810841 agaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgacctataatcacccctcta---catc 53810937  T
Q  730 ntttcccctcttcttctttcaatctaaataagtg-gtttcatatatatcaagtttttccttttgtgttttt 799  Q
     ||| ||| ||| |||||||||| ||||||||||  ||||| || ||||||||| ||||||||||||||||    
T  53810938 tttttccccctt-ttctttcaatttaaataagtgattttcacatctatcaagttattccttttgtgttttt 53811007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 21686428 - 21686371
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  21686428 ttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 21686371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 35348119 - 35348204
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| |||||||||||| ||||||||||  |||||  |||| |||| ||||| |||| ||||||||||| ||||||    
T  35348119 agaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaatcac 35348204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 632 - 696
Target Start/End: Complemental strand, 9165339 - 9165273
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtca 696  Q
    |||||||||||||| ||| |||||||||||| ||| |||||||||  ||||||||||||||| ||||    
T  9165339 agaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtca 9165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 644 - 722
Target Start/End: Complemental strand, 29121961 - 29121882
Alignment:
Q  644 ttttctttaaactttctttctccttcattcatcggagagg-tggttttaagtcactttttgacctaaaatcactcatcta 722  Q
    |||| |||||| ||| |||||||||| |||||||  || | |||||||| |||| |||||||||||||||||||||||||    
T  29121961 ttttttttaaattttatttctccttcgttcatcgaggatgatggttttaggtcattttttgacctaaaatcactcatcta 29121882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 632 - 683
Target Start/End: Complemental strand, 51024757 - 51024706
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg 683  Q
    |||||||||||||| ||| || |||||||||||||||| |||||||||||||    
T  51024757 agaaactccaacttctctctatactttctttctccttcgttcatcggagagg 51024706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 10496155 - 10496240
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| | | ||||||||||| ||||||| ||||||  ||||  ||||||||| |||| ||||||||||| ||||||    
T  10496155 agaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatcac 10496240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 29961225 - 29961055
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||||||| |||||  ||||||| |||||  || ||||| || | |||||||| || |||||| ||||||           
T  29961225 agaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttgacatagaatcacccatctacttcttt 29961126  T
Q  730 ntttcccctcttcttctttcaatctaaataagtg-gtttcatatatatcaagtttttccttttgtgttttt 799  Q
     || |   | || || ||||||||||||||||||  ||||| || ||||||||||||||||||||||||||    
T  29961125 tttccttttttttttttttcaatctaaataagtgattttcacatctatcaagtttttccttttgtgttttt 29961055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 677
Target Start/End: Complemental strand, 26091209 - 26091164
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg 677  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||    
T  26091209 agaaactccaacttctctctaaaccttctttctccttcattcatcg 26091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 35348227 - 35348283
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||    
T  35348227 ttctttcaatctaaataagtggttttcacaaatatcaagttttt-cttttgtgttttt 35348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 45418448 - 45418505
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||| ||||| |||||||| ||||| || |||||||||||||||||||||||||||||    
T  45418448 ttctctcaatataaataagaggttttcacatatatcaagtttttccttttgtgttttt 45418505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 47158149 - 47158206
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||| |||| | ||||||||||||||| |||||||||||||    
T  47158149 ttctttcaatttaaataagtgatttccacatatatcaagttttttcttttgtgttttt 47158206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 746 - 793
Target Start/End: Complemental strand, 26091098 - 26091050
Alignment:
Q  746 tttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgt 793  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  26091098 tttcaatctaaataagtggttttcacataaatcaagtttttccttttgt 26091050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 743 - 798
Target Start/End: Complemental strand, 40066242 - 40066186
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgtttt 798  Q
    |||||||||| |||||||||||||| || |||| | |||||||||||||||||||||    
T  40066242 ttctttcaatataaataagtggttttcacatattttaagtttttccttttgtgtttt 40066186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 715
Target Start/End: Original strand, 9178189 - 9178255
Alignment:
Q  651 taaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||| |||||||||||||||||||||  |||| |||||| ||| |||| ||||||||||| ||||||    
T  9178189 taaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatcac 9178255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 785
Target Start/End: Complemental strand, 56040835 - 56040788
Alignment:
Q  739 cttcttctttcaatctaaataagtgg-tttcatatatatcaagttttt 785  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||    
T  56040835 cttcttctttcaatctaaataagtggttttcacatctatcaagttttt 56040788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 9713829 - 9713887
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaag-tttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || |||||||||| |||||| ||||||||||||    
T  9713829 ttctttcaatctaaataagtgatttccacatatatcaagttttttctttttgtgttttt 9713887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 746 - 799
Target Start/End: Complemental strand, 17949508 - 17949454
Alignment:
Q  746 tttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||  ||||||||||||| || | |||||||||||||||||||||||||||    
T  17949508 tttcaatagaaataagtggttttcacacatatcaagtttttccttttgtgttttt 17949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 746 - 799
Target Start/End: Complemental strand, 17953360 - 17953306
Alignment:
Q  746 tttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||  ||||||||||||| || | |||||||||||||||||||||||||||    
T  17953360 tttcaatagaaataagtggttttcacacatatcaagtttttccttttgtgttttt 17953306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 22300658 - 22300743
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| |||| ||| |||||| |||| || |||  ||||  |||||||| |||| ||||||||||||||||||    
T  22300658 agaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatcac 22300743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 710
Target Start/End: Original strand, 21662304 - 21662377
Alignment:
Q  638 tccaacttttctttaaactttctttctccttcattcatc-ggagaggtggttttaagtcactttttgacctaaa 710  Q
    ||||| |||||| |||| ||||||||| |||||||||   |||| |||||||||| |||| |||||||||||||    
T  21662304 tccaatttttctctaaaatttctttcttcttcattcacgaggaggggtggttttaggtcattttttgacctaaa 21662377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 710
Target Start/End: Original strand, 21671068 - 21671141
Alignment:
Q  638 tccaacttttctttaaactttctttctccttcattcatc-ggagaggtggttttaagtcactttttgacctaaa 710  Q
    ||||| |||||| |||| ||||||||| |||||||||   |||| |||||||||| |||| |||||||||||||    
T  21671068 tccaatttttctctaaaatttctttcttcttcattcacgaggaggggtggttttaggtcattttttgacctaaa 21671141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 677
Target Start/End: Original strand, 33920865 - 33920910
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg 677  Q
    ||||||| |||||||||  |||||||||||||| ||||||||||||    
T  33920865 agaaacttcaacttttccctaaactttctttcttcttcattcatcg 33920910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 790
Target Start/End: Original strand, 52978749 - 52978794
Alignment:
Q  746 tttcaatctaaataagtggttt-catatatatcaagtttttccttt 790  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||    
T  52978749 tttcaatctaaataagtgattttcacatatatcaagtttttccttt 52978794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 2268 - 2102
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||| |||||||||| |||||||  ||||  ||||||||||||| ||||||| ||| |||||| | ||||           
T  2268 agaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccctcta-catctt 2170  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggtttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| ||  |||||||||||||||||||||||||| || |||||||||||| |||||||||||||    
T  2169 ttttcccctttt--tctttcaatctaaataagtggtttcacatctatcaagttttttcttttgtgttttt 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 33053464 - 33053298
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||  | ||||           
T  33053464 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcatccctcta-catctt 33053366  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  33053365 ttttcccc---ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 33053298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 12170289 - 12170455
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| || |||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  12170289 agaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta-catctt 12170387  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | |||||||||||||||||||||| ||||| || ||||||||||||| ||||||||||||    
T  12170388 ttttcccc---ttttctttcaatctaaataagtggttttcacatctatcaagtttttcgttttgtgttttt 12170455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 796
Target Start/End: Original strand, 605998 - 606161
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||  |||| |||| ||||| |||| |||||||||||  ||||| | ||||           
T  605998 agaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcacccctcta-catctt 606096  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgtt 796  Q
     |||||||   | |||||||||||||||||||||| ||||| || |||||| ||||||||||||||||    
T  606097 ttttcccc---ttttctttcaatctaaataagtggttttcacatctatcaaatttttccttttgtgtt 606161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 32328879 - 32328794
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||| ||||| ||| || |||||||||||||||| |||||||  ||| ||||||||||||||| ||||||||||| ||||||    
T  32328879 agaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctataatcac 32328794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 68296 - 68131
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||  ||||  |||||||| || | ||||||||||| |||||| |  || |          
T  68296 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggtaa-tttttgacctagaatcacccc-ctctacatct 68199  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| ||||| |   |||||||||||||||||| || || ||||||||||||||||||||||||||    
T  68198 ttttccccttttctttt---aatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 68131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 3913869 - 3913785
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggaga-ggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| ||||||||||||||||||  |||||||  || |||||||||| |||| ||||||||||| ||||||    
T  3913869 agaaactccaacttctctctaaactttctttctcctttgttcatcgaggagggtggttttaggtcattttttgacctagaatcac 3913785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 632 - 714
Target Start/End: Original strand, 32059703 - 32059787
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatca 714  Q
    ||||| ||||| || ||||||||| ||||||||| ||||||||||  ||| |||||||||||||||| | ||||||||| |||||    
T  32059703 agaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaatca 32059787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 32327404 - 32327347
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||||||| || || ||||||||||||||||||||||||||    
T  32327404 ttctttcaatataaataagtggttttcacatctatcaagtttttccttttgtgttttt 32327347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 34018463 - 34018520
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||||||| || ||||||||||||||| |||||||||||||    
T  34018463 ttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgttttt 34018520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 744 - 799
Target Start/End: Complemental strand, 3913760 - 3913704
Alignment:
Q  744 tctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  3913760 tctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 3913704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 785
Target Start/End: Complemental strand, 29255738 - 29255586
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||| |||||||| |||  ||||| |||||||||||| |||||||  |||| ||||||||| |||| | ||||| ||||||||| |||||||           
T  29255738 agaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttgatctaaaatcattcatcta---catc 29255642  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagttttt 785  Q
     ||| ||| ||| |||||||||||||||||||||| |||| |||||| |||||||||    
T  29255641 tttttccccctt-ttctttcaatctaaataagtggttttcttatataacaagttttt 29255586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 799
Target Start/End: Original strand, 127583 - 127630
Alignment:
Q  753 ctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||    
T  127583 ctaaataagtggttttcacatatatcaagtttttccttttgtgttttt 127630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 23128412 - 23128578
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||| ||||| ||| ||||||||||||||||||| ||||| |  ||||  | |||||| |||| ||||||||||| |||||| | ||||           
T  23128412 agaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccctcta--catct 23128509  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||||  ||  ||||||| |||||||||||||||| || || |||||||||||||||||||| |||||    
T  23128510 ttttccccattt--tctttcattctaaataagtggttttcacatctatcaagtttttccttttgtattttt 23128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 795
Target Start/End: Complemental strand, 11321656 - 11321603
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgt 795  Q
    |||||||||||||||||||||| ||||| |||||| |||||||| |||||||||    
T  11321656 ttctttcaatctaaataagtggttttcacatatattaagttttttcttttgtgt 11321603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 637 - 715
Target Start/End: Complemental strand, 29320153 - 29320073
Alignment:
Q  637 ctccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||||| ||||||||||||||||||||||| ||||||  |||  |||||||||| ||||  |||||| ||| ||||||    
T  29320153 ctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatcac 29320073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 7515388 - 7515331
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    ||||| |||||||||||||||| ||||| || |||||||||| | |||||||||||||    
T  7515388 ttcttccaatctaaataagtggttttcacatctatcaagtttcttcttttgtgttttt 7515331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 795
Target Start/End: Complemental strand, 26588655 - 26588602
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgt 795  Q
    |||||| |||||||||||||||||| || |||||||||||||||  ||||||||    
T  26588655 ttcttttaatctaaataagtggtttccacatatatcaagtttttttttttgtgt 26588602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 30493432 - 30493489
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||| ||||||||||| |||| | ||||||||||| ||| |||||||||||||    
T  30493432 ttctttcaaactaaataagtgatttccacatatatcaagtgttttcttttgtgttttt 30493489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 10232863 - 10233029
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  10232863 agaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaatcacccctcta-catctt 10232961  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | |||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||    
T  10232962 ttttcccc---ttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt 10233029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 47895944 - 47896110
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||  ||| ||||||| ||  ||| ||||||||||| |||||| | ||||           
T  47895944 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatcacccctcta----cat 47896039  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||   ||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  47896040 cttttttctctttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttt 47896110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 21431418 - 21431583
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| |||||||||||||||||| | ||||           
T  21431418 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca-tttttgacctaaaatcacccctcta-catctt 21431515  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||   | | |||||||||||||||||||||| ||||| || ||||||||||||| ||||||||||||    
T  21431516 ttttcc---cattttctttcaatctaaataagtggttttcacatctatcaagtttttctttttgtgttttt 21431583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 48651031 - 48650864
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||||||||||| || ||||||  |||| |||||||||| |||| |||||||||||||||||| | || |           
T  48651031 agaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctaaaatcacccctcgacatcttt 48650932  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | ||||||||||||  |||||||| ||||| || ||||||||||||||||||||||||||    
T  48650931 ttttcccc---ttttctttcaatctgtataagtggttttcacatctatcaagtttttccttttgtgttttt 48650864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 795
Target Start/End: Complemental strand, 52923411 - 52923251
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcat--cggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||   |||||||| ||||||||||| ||||||||||| |||||| | ||||           
T  52923411 agaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtca-tttttgacctagaatcacccctcta-catctt 52923314  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgt 795  Q
     ||||||    | |||||||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  52923313 ttttccc----ttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt 52923251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 9797823 - 9797659
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnnt 731  Q
    |||||||||||||| ||| |||||||| |||||||||| |||||  |||||||||||||| |||| ||||||||||| |||||| | ||||        |    
T  9797823 agaaactccaacttctctctaaactttatttctccttcgttcat-tgagaggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 9797725  T
Q  732 ttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    ||   ||||| |||||||||||||||||||||| ||||| || |||||||||| | |||||||||||||    
T  9797724 tt--tctctt-ttctttcaatctaaataagtggttttcacatctatcaagtttctacttttgtgttttt 9797659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 9998259 - 9998426
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtca-ctttttgacctaaaatcactcatctatnnnnn 728  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| ||||  ||||||||||| |||||| | ||||          
T  9998259 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaatcacccctcta-catct 9998357  T
Q  729 nntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
      |||||||   | |||||||||||||||||||||| |||||  | ||||||||||||| ||||||||||||    
T  9998358 tttttcccc---ttttctttcaatctaaataagtggttttcacgtctatcaagtttttcattttgtgttttt 9998426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 10108031 - 10108195
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||  |||||||  ||| |||||||||| ||||  |||||||||| |||||| | ||||           
T  10108031 agaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtca--ttttgacctagaatcacccctcta-catctt 10108127  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| |||||   |||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
T  10108128 ttttccccttttctt---tcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt 10108195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 714
Target Start/End: Original strand, 32701291 - 32701375
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatca 714  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||  || | |||||||||| |||| ||||||||||| |||||    
T  32701291 agaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacctagaatca 32701375  T

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Target: chr3; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 722
Target Start/End: Original strand, 40487118 - 40487210
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatcta 722  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||| ||||| |||| ||||||||||| |||||||| ||||    
T  40487118 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcactcttcta 40487210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 6954992 - 6954826
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||  |  ||| |||| ||||| |||| ||||||||||| |||||| | ||||           
T  6954992 agaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccctcta-catctt 6954894  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| |||||   ||||||||||||||||| ||||| || ||||||||||||| ||||||||||||    
T  6954893 ttttccccttttctt---tcaatctaaataagtgggtttcacatctatcaagtttttcattttgtgttttt 6954826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 33579661 - 33579746
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggaga--ggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||| |||||| ||| |||||||||||| |||||| ||||||| |||  ||||||||||||||| ||||||||||| ||||||    
T  33579661 agaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcac 33579746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 45568740 - 45568574
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||| ||| ||| |  ||||||           
T  45568740 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaataatccatcta-catctt 45568642  T
Q  730 ntttcccctcttcttctttcaatctaaataag-tggtttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | ||||||||||||||||||| || ||||| || |||||||||||| ||||| |||||||    
T  45568641 ttttcccc---ttttctttcaatctaaataagttgttttcacatctatcaagttttttcttttctgttttt 45568574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 723
Target Start/End: Original strand, 38545628 - 38545721
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcat--cggagaggtggttttaagtcactttttgacctaaaatcactcatctat 723  Q
    ||||||| |||||| ||| ||||||||||||||||||| |||||   |||| |||||||||| |||| ||||||||||| ||||| || |||||    
T  38545628 agaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatcattcctctat 38545721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 40556504 - 40556589
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| | | ||||||||||||||| ||| ||||||  |||| |||||||||| |||| ||||||||||| ||||||    
T  40556504 agaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcac 40556589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 10229378 - 10229435
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
T  10229378 ttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt 10229435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 632 - 714
Target Start/End: Complemental strand, 26276089 - 26276005
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatca 714  Q
    |||||||| || || ||| |||||||||||||||||| |||||| |  |||||||||||||| || | |||||||||||||||||    
T  26276089 agaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttgacctaaaatca 26276005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 632 - 798
Target Start/End: Complemental strand, 35865229 - 35865066
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| |||||| ||| ||||||||||||||||||| ||| ||  |||| |||||||||| |||| ||||||| |||||||||  | ||||           
T  35865229 agaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtca-tttttgatctaaaatcatccttcta---catc 35865134  T
Q  730 ntttcccctcttcttctttcaatctaaataagt-ggtttcatatatatcaagtttttccttttgtgtttt 798  Q
     |||  |||||| |||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||    
T  35865133 ttttttcctctt-ttctttcaatctaaataagtagttttcacatatatcaagttttt-cttttgtgtttt 35865066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 36910828 - 36910771
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||| |||||||||    
T  36910828 ttctttcaatctaaataagtggttttcacatctatcaagtttttccttctgtgttttt 36910771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 743 - 794
Target Start/End: Complemental strand, 20609077 - 20609025
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtg 794  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  20609077 ttctttcaatctaaataagtggttttaacatatatcaagtttttccttttgtg 20609025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 651 - 799
Target Start/End: Original strand, 54148800 - 54148947
Alignment:
Q  651 taaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnntttcccctcttcttcttt 748  Q
    ||||||||||||||||||| |  ||||  ||| |||||||||| |||| ||||||||||| |||||| | ||||        |||  |||||| ||||||    
T  54148800 taaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccctcta---catcttttttcctctt-ttcttt 54148895  T
Q  749 caatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||| ||||| || |||||||||||| ||||||| |||||    
T  54148896 caatctaaataagtggttttcacatctatcaagttttttcttttgtattttt 54148947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 746 - 799
Target Start/End: Original strand, 9319961 - 9320015
Alignment:
Q  746 tttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||| ||||||||||||| || || ||||||||||||||||||||||||||    
T  9319961 tttcaatcaaaataagtggttttcacatctatcaagtttttccttttgtgttttt 9320015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 678
Target Start/End: Complemental strand, 43488893 - 43488847
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcgg 678  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  43488893 agaaacttcaacttctctctaaactttctttctccttcattcatcgg 43488847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 47042348 - 47042263
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| |||||||| ||| |||||| ||||||  |||| |||||||||| |||| ||||| ||||| ||||||    
T  47042348 agaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataatcac 47042263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 29921954 - 29922011
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||    
T  29921954 ttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttt 29922011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 29971107 - 29971164
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||    
T  29971107 ttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttt 29971164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 33579769 - 33579826
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||    
T  33579769 ttctttcaatctaaataagtgattttcacatatatctagttttttcttttgtgttttt 33579826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 36461618 - 36461561
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || || |||||||||||| |||||||||||||    
T  36461618 ttctttcaatctaaataagtgattttcacatctatcaagttttttcttttgtgttttt 36461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 43488777 - 43488720
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| || |||||||||||| | |||||||||||    
T  43488777 ttctttcaatctaaataagtggttttcacatctatcaagttttttcatttgtgttttt 43488720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 744 - 799
Target Start/End: Complemental strand, 50194470 - 50194414
Alignment:
Q  744 tctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||| |||| | ||||||||||| ||| |||||||||||||    
T  50194470 tctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttt 50194414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 799
Target Start/End: Complemental strand, 23800188 - 23800039
Alignment:
Q  651 taaactttctttctccttcattcatcggagagg----tggttttaagtcactttttgacctaaaatcactcatctatnnnnnnntttcccctcttcttct 746  Q
    |||| ||| |||||||||||||||||| |||||    |||||||| || | ||||||||||||||| |||| ||||        |||  |||||| ||||    
T  23800188 taaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttgacctaaaattactcttcta---catcttttttcctctt-ttct 23800093  T
Q  747 ttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||| ||| | |||||||||||||  |||||| |||||||    
T  23800092 ttcaatctaaataagtggtttttacatatatcaagtttgcccttttttgttttt 23800039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 691
Target Start/End: Original strand, 10229267 - 10229328
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggtttta 691  Q
    ||||||||||| || ||| ||||||||||||||||||| ||||||  |||| ||||||||||    
T  10229267 agaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggtttta 10229328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 18010920 - 18010978
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaa-gtttttccttttgtgttttt 799  Q
    ||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||||    
T  18010920 ttctttcgatctaaaaaagtggttttcacatatatcaaagtttttccttttgtgttttt 18010978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 746 - 799
Target Start/End: Complemental strand, 20465154 - 20465100
Alignment:
Q  746 tttcaatctaaataagtggtttcat-atatatcaagtttttccttttgtgttttt 799  Q
    ||||||| |||||||||| ||| |  |||||||||||||||||||||||||||||    
T  20465154 tttcaatataaataagtgattttaacatatatcaagtttttccttttgtgttttt 20465100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 655 - 714
Target Start/End: Complemental strand, 20609170 - 20609109
Alignment:
Q  655 ctttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatca 714  Q
    ||||||||||||||||||| |||  ||| |||| |||||||| | |||||||||||||||||    
T  20609170 ctttctttctccttcattcgtcgaggaggggtgattttaagttattttttgacctaaaatca 20609109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 7449089 - 7449032
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||  || ||||||||||| ||||||| ||||||    
T  7449089 ttctttcaatctaaataagtggttttcgcatctatcaagttttcccttttgagttttt 7449032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 7457231 - 7457174
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||  || ||||||||||| ||||||| ||||||    
T  7457231 ttctttcaatctaaataagtggttttcgcatctatcaagttttcccttttgagttttt 7457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 7887596 - 7887540
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||    
T  7887596 ttctttcaatctaaataagtgatttccatgtatat-aagtttttccttttttgttttt 7887540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 747 - 799
Target Start/End: Complemental strand, 12947464 - 12947411
Alignment:
Q  747 ttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||| |||| | ||||||||||| ||| |||||||||||||    
T  12947464 ttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttt 12947411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 20987986 - 20987929
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||| ||| || ||||||| ||||||| |||||||||||||    
T  20987986 ttctttcaatttaaataagtgattttcaaatatatcgagttttttcttttgtgttttt 20987929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 22290839 - 22290896
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||| |||||||||||||| ||| || |||||| || |||||||||||||||||||    
T  22290839 ttcttttaatctaaataagtgattttcacatatattaaatttttccttttgtgttttt 22290896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 31271994 - 31271937
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||| ||||||||||||| |||||| || || |||||||||||| |||||||||||||    
T  31271994 ttctatcaatctaaataaatggttttcacatttatcaagttttttcttttgtgttttt 31271937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 754 - 798
Target Start/End: Original strand, 40556624 - 40556669
Alignment:
Q  754 taaataagtggttt-catatatatcaagtttttccttttgtgtttt 798  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||||    
T  40556624 taaataagtggttttcatatctatcaagttttcccttttgtgtttt 40556669  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 53508122 - 53508179
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||| ||| || ||||||||||||||| ||| |||||||||    
T  53508122 ttctttcaatataaataagtgattttcacatatatcaagttttttcttctgtgttttt 53508179  T

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Target: chr2 (Bit Score: 56; Significance: 9e-23; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 632 - 798
Target Start/End: Original strand, 7646275 - 7646441
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  7646275 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttt 7646374  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgtttt 798  Q
     |||||||   | ||||||| |||||||||||||| ||||| || || ||||||||||||||||||||||    
T  7646375 ttttcccc---ttttctttcgatctaaataagtggttttcacatctaccaagtttttccttttgtgtttt 7646441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 4098906 - 4099072
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggaga--ggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||| ||| |||||||  ||  ||||| |||| |||| ||||||||||| |||||| ||||||           
T  4098906 agaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatcacccatcta-catctt 4099004  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| |||||   |||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  4099005 ttttccccttttctt---tcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 4099072  T

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Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 4778556 - 4778722
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| | | ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  4778556 agaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttt 4778655  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     ||||||    | |||||||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  4778656 ttttccc----ttttctttcaatttaaataagtggttttcacatctatcaagtttttccctttgtgttttt 4778722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 9169553 - 9169388
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||| ||| || ||||  ||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  9169553 agaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtca-tttttgacctagaatcacccctctacattttt 9169455  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||| |    ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  9169454 ttttccctt----ttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 9169388  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 7448051 - 7448216
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||||||| |||||| ||||||  |||| |||||||||| |||| |||||| |||| |||||| | ||||           
T  7448051 agaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaatcacccctcta--catct 7448148  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||||    
T  7448149 ttttcccc---ttttctttcaatctaaataaatggttttcacatctatcaagtttttccttttgtgttttt 7448216  T

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Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 632 - 795
Target Start/End: Complemental strand, 11985526 - 11985365
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||| ||||||| ||  |||| ||||||||||||||| ||||| ||||| |||||| | ||||           
T  11985526 agaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatcacccctcta--caact 11985429  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgt 795  Q
     |||||||   | |||||||||| ||||||||||| ||||| ||||||||||||||| |||||||||    
T  11985428 ttttcccc---ttttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgt 11985365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 36691786 - 36691842
Alignment:
Q  743 ttctttcaatctaaataagtggtttcatatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  36691786 ttctttcaatctaaataagtggtttcacatatatcaagttttttcttttgtgttttt 36691842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 18763271 - 18763356
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| ||||||||||||| ||||||| ||||  ||||||||||||||| |||| ||||||||||| ||||||    
T  18763271 agaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcac 18763356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 43397415 - 43397251
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcgg--agaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| |||||||||||||||| | |||| |||||||   || |||||||||| |||| ||||||||||| ||||||   ||| |          
T  43397415 agaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgacctagaatcacc--tctctacatct 43397318  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||| |    ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  43397317 ttttccctt----ttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttt 43397251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 29279758 - 29279701
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  29279758 ttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt 29279701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 31128967 - 31128910
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  31128967 ttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt 31128910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 27097701 - 27097537
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||| ||||| |||| ||||||||||| |||||| | ||||           
T  27097701 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcac-cctcta-catctt 27097604  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggtttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | ||||||  ||||||||||||| ||||| |  ||||||||||||||||||||||||||    
T  27097603 ttttcccc---ttttcttttgatctaaataagtgatttcacaactatcaagtttttccttttgtgttttt 27097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 35220134 - 35220216
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||| | ||| |||||||||||||||||||||||||| ||| |||||||||| || | ||||||||||| ||||||    
T  35220134 agaaactccaacctctctctaaactttctttctccttcattcatc-gaggggtggttttaggttattttttgacctagaatcac 35220216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 7678174 - 7678089
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| ||||||||||||||||||| || ||||  ||| |||||||||| |||| ||||||||||| ||||||    
T  7678174 agaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcac 7678089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 8809085 - 8809250
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||| ||||| ||| ||||||||||||||||||||| | ||  ||| |||||||||||  ||| |||||||||||||||||| | ||||           
T  8809085 agaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatca-tttttgacctaaaatcacccctcta---catc 8809180  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||  |||||| ||||||||||| |||||||||| || || |||||| ||||||||||||||||||||||    
T  8809181 ttttttcctctt-ttctttcaatcaaaataagtggcttgcacatatattaagtttttccttttgtgttttt 8809250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 4041782 - 4041725
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  4041782 ttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 4041725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 31788259 - 31788425
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||||||||| |||| ||||||  ||||||| ||||||| || | ||||||||||| |||||| | ||||           
T  31788259 agaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaatcacccctcta-catctt 31788357  T
Q  730 ntttcccctcttcttctttcaatctaaataagtg-gtttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||   | | |||||||||||||||||||||  ||||| || ||||||||| ||||||||||||||||    
T  31788358 ttttcc---cattttctttcaatctaaataagtgattttcacatctatcaagttgttccttttgtgttttt 31788425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 746 - 799
Target Start/End: Complemental strand, 4904330 - 4904276
Alignment:
Q  746 tttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  4904330 tttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttt 4904276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 5428164 - 5427998
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||| |||||||||||||| |||||||  ||| |||||||||| || | ||||||||||| | |||    ||||           
T  5428164 agaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgacctagagtcatcgttcta-catctt 5428066  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggtttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| ||  |||||||||||||||||||  ||||| || |||||||||||| |||||||||||||    
T  5428065 ttttcccctttt--tctttcaatctaaataagttttttcacatctatcaagttttttcttttgtgttttt 5427998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 36943420 - 36943335
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||||||| || ||| ||||||||||||||||||| || |||  |||| |||||||||| |||| ||||||||||| ||||||    
T  36943420 agaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaatcac 36943335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 19062540 - 19062483
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||| |||||||    
T  19062540 ttctttcaatctaaataagtggttttcacatctatcaagtttttccttttatgttttt 19062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 633 - 715
Target Start/End: Complemental strand, 37876893 - 37876809
Alignment:
Q  633 gaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||| |||||||| ||| |||||||||||||| |||| ||||||  |||| |||||||||| |||| ||||||||||| ||||||    
T  37876893 gaaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatcac 37876809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 651 - 799
Target Start/End: Original strand, 38444989 - 38445135
Alignment:
Q  651 taaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnntttcccctcttcttcttt 748  Q
    ||||||||||||||||||| |||||||  |||||||||||||| |||| ||||||| ||| |||||| | ||||        ||||||   || ||||||    
T  38444989 taaactttctttctccttcgttcatcgatgagaggtggttttaggtca-tttttgatctagaatcacccctcta-catcttttttccc---tttttcttt 38445083  T
Q  749 caatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||| |||||||||||||| || || |||||||||||| |||||||||||||    
T  38445084 caatataaataagtggttttcacatctatcaagttttttcttttgtgttttt 38445135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 743 - 798
Target Start/End: Complemental strand, 25509252 - 25509196
Alignment:
Q  743 ttctttcaatctaaataagtggtttcat-atatatcaagtttttccttttgtgtttt 798  Q
    |||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||    
T  25509252 ttctttcaatctaaataaatggttttaagatatatcaagtttttccttttgtgtttt 25509196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 632 - 722
Target Start/End: Complemental strand, 39311144 - 39311053
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg-gagaggtggttttaagtcactttttgacctaaaatcactcatcta 722  Q
    |||||||| |||||| || ||| |||||||||| |||||||||||| ||  |||| ||||| |||| ||||||||||| |||||| ||||||    
T  39311144 agaaactcgaactttgctctaagctttctttcttcttcattcatcgagaatggtgattttaggtcattttttgacctagaatcacccatcta 39311053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 12677592 - 12677507
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    |||||||||||||| ||| ||||||||||||||||||  ||||||  |||| ||| |||| | |||| ||||||||||| ||||||    
T  12677592 agaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgacctagaatcac 12677507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 702
Target Start/End: Original strand, 1421474 - 1421546
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcacttttt 702  Q
    |||||||||||||| ||  ||||||||||||||||||| ||||||  |||| |||||||||| |||| |||||    
T  1421474 agaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttt 1421546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 4264384 - 4264441
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||| ||| |||||||||||||| || |||||||||||||||| ||||||||||||    
T  4264384 ttcttttaatttaaataagtggttttcacatatatcaagtttttcattttgtgttttt 4264441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 803
Target Start/End: Complemental strand, 28871950 - 28871889
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgtttttatgt 803  Q
    |||||||||| |||||||||| ||| || | |||||||||||||| ||||||||||||||||    
T  28871950 ttctttcaatttaaataagtgattttcacacatatcaagtttttcattttgtgtttttatgt 28871889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 29173907 - 29173850
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||| ||||||||||||| || |||| ||| ||||||||||||||||||||    
T  29173907 ttctttcaatccaaataagtggttttcacatatttcaggtttttccttttgtgttttt 29173850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 715
Target Start/End: Complemental strand, 17995014 - 17994927
Alignment:
Q  630 acagaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||||| || ||| ||| ||||||||||||||| |||  || |||  |||||||||||||| |||| |||||| |||||||||||    
T  17995014 acagaaacttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggtggttttaggtcattttttgccctaaaatcac 17994927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 660 - 717
Target Start/End: Complemental strand, 30400307 - 30400248
Alignment:
Q  660 tttctccttcattcatcgg--agaggtggttttaagtcactttttgacctaaaatcactc 717  Q
    ||||||||||||||||||   |||||||||||||  ||| ||||||||||||||||||||    
T  30400307 tttctccttcattcatcgagaagaggtggttttagatcattttttgacctaaaatcactc 30400248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 4904432 - 4904347
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagag--gtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||| |||||| ||| ||||||||||||||| ||| || || | ||||  ||||||||| |||| ||||||||||| ||||||    
T  4904432 agaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttgacctataatcac 4904347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 6359065 - 6359008
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||| |||| | ||||||||||||||| | |||||||||||    
T  6359065 ttctttcaatttaaataagtgttttctacatatatcaagttttttcctttgtgttttt 6359008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 795
Target Start/End: Complemental strand, 12648112 - 12648059
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgt 795  Q
    ||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||    
T  12648112 ttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgt 12648059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 765 - 798
Target Start/End: Complemental strand, 42698863 - 42698830
Alignment:
Q  765 tttcatatatatcaagtttttccttttgtgtttt 798  Q
    |||||||| |||||||||||||||||||||||||    
T  42698863 tttcatatttatcaagtttttccttttgtgtttt 42698830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 34899900 - 34899737
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnnt 731  Q
    |||||||||||||| ||| ||||||||||||||||||| |||| ||  ||| |||||||| |||| ||||||||||| |||||| | ||||        |    
T  34899900 agaaactccaacttctctctaaactttctttctccttcgttcaccgatgag-tggttttaggtcattttttgacctagaatcacccctctacatcttttt 34899802  T
Q  732 ttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||| |    ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  34899801 ttccctt----ttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 34899737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 48061217 - 48061384
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||||||| |||||| ||||||  ||||||||||||||| |||| |||||||| || |||||| |  |||           
T  48061217 agaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttgacttagaatcaccccacta-catatt 48061315  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     ||||||  ||| |||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  48061316 ttttccc--ctttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 48061384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 12141604 - 12141437
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||  ||| |||||||||| |||| |||||||| || |||||| | ||||           
T  12141604 agaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacatagaatcacccctcta--catct 12141507  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     ||| |||| || || ||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  12141506 tttttccct-tttttatttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 12141437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 40992977 - 40993143
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggaga-ggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnn 730  Q
    |||||||||||||| ||| ||||||||  |||| |||| |||||||  || ||| |||||| |||| |||||||||||||||||||| ||||            
T  40992977 agaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatggtagttttaggtcattttttgacctaaaatcactcctctacatctttt 40993076  T
Q  731 tttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||| || |||||   |||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  40993077 tttccacttttctt---tcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 40993143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 9450433 - 9450267
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||  |||| | |||||||| |||| ||||||||||| |||||| ||||||           
T  9450433 agaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaatcacccatcta-catctt 9450335  T
Q  730 ntttcccctcttcttctttcaatctaaataagtg-gtttcatatatatcaagtttttccttttgtgttttt 799  Q
     |||||||   | |||||||||||||||||||||  ||||| || |||| ||||| |||||||||||||||    
T  9450334 gtttcccc---ttttctttcaatctaaataagtgattttcacatctatctagtttctccttttgtgttttt 9450267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 799
Target Start/End: Complemental strand, 39171886 - 39171721
Alignment:
Q  634 aaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnnt 731  Q
    |||||||||| | ||| |||||||||||||| |||| |||||||  ||| ||||||| || |||| ||||||||||| |||||| | ||||        |    
T  39171886 aaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaatcacccctctacatcttttt 39171787  T
Q  732 ttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    || ||   || ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  39171786 tttcc---tttttctttcgatctaaataagtggttttcatatctatcaagtttttccttttgtgttttt 39171721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 37837754 - 37837589
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcat--cggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||| |||||||||| |||||   |||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  37837754 agaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctcta-catctt 37837656  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     ||||||    | ||||||||||||||||||||||||| || |||||| |||||||| |||||||||||||    
T  37837655 ttttccc----ttttctttcaatctaaataagtggtttacacatatattaagttttttcttttgtgttttt 37837589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 47590215 - 47590272
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  47590215 ttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt 47590272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 632 - 796
Target Start/End: Original strand, 42978403 - 42978567
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||| ||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||| || || |          
T  42978403 agaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcac-ca-ctctacatct 42978500  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgtt 796  Q
     |||| || ||| |||  ||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  42978501 ttttctcccctt-ttcgatcaatctaaataagtggttttcacatatataaagtttttccttttgtgtt 42978567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 30757115 - 30756949
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| |||||| ||| |||| |||||||||| ||| |||||||  ||| |||||||||| || | ||||||||||| |||||| | ||||           
T  30757115 agaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccctcta-catctt 30757017  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| |||||   |||||||||||||||| ||| || || ||||| ||||||||||||||||||||    
T  30757016 ttttccccttttctt---tcaatctaaataagtgattttcacatctatcatgtttttccttttgtgttttt 30756949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 632 - 792
Target Start/End: Complemental strand, 19405050 - 19404892
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcgg--agaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| ||||  |||||||||||| |||||| |   || |||||||||| |||| ||||||||||| |||||| | ||||           
T  19405050 agaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcacccctctacatcttt 19404951  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttg 792  Q
     |||||     | |||||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  19404950 ttttcc-----ttttctttcaatctaaataagtggttttcacataaatcaagtttttccttttg 19404892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 48317108 - 48316942
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||| ||||| ||| |||| || ||||||||||| ||||||  |||| |||||||||| |||| |||| |||||| |||||| | ||||           
T  48317108 agaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctcta---catc 48317012  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     ||| ||| ||| |||||||||| ||||||||||| ||||| || |||||| ||||| |||||||||||||    
T  48317011 tttttccccctt-ttctttcaatttaaataagtggttttcacatctatcaaattttttcttttgtgttttt 48316942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 743 - 794
Target Start/End: Original strand, 46699948 - 46700000
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtg 794  Q
    |||||||| |||||||||||||||| || || |||||||||||||||||||||    
T  46699948 ttctttcattctaaataagtggtttccacatgtatcaagtttttccttttgtg 46700000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 715
Target Start/End: Complemental strand, 8013761 - 8013676
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||| |||||| ||| |||||||||||||| |||  ||||||  |||| ||||||||||  ||| ||||||||||| ||||||    
T  8013761 agaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaatcac 8013676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 743 - 796
Target Start/End: Complemental strand, 38051255 - 38051201
Alignment:
Q  743 ttctttcaatctaaataagtggtttca-tatatatcaagtttttccttttgtgtt 796  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||  |||||||||    
T  38051255 ttcttttaatctaaatatgtggtttcaatatatatcaagtttttttttttgtgtt 38051201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 13797119 - 13797062
Alignment:
Q  743 ttctttcaatctaaataagtggtttcat-atatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||| ||| |  || ||||||||||||||||||||||||||    
T  13797119 ttctttcaatttaaataagtgattttaacatctatcaagtttttccttttgtgttttt 13797062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 694
Target Start/End: Complemental strand, 25287477 - 25287413
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagt 694  Q
    |||||||  ||||| ||| |||| |||||||||||||||||| |||  |||||||||||||||||    
T  25287477 agaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagt 25287413  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 26610932 - 26610875
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    |||||| ||| ||||||||||||||| | |||||||||||||| | ||||||||||||    
T  26610932 ttctttgaatttaaataagtggtttccacatatatcaagttttccattttgtgttttt 26610875  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 28476124 - 28476180
Alignment:
Q  743 ttctttcaatctaaataagtg-gtttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||  ||||| ||| ||||||||||| |||||||||||||    
T  28476124 ttctttcaatctaaataagtgattttcacatacatcaagttttt-cttttgtgttttt 28476180  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 41553625 - 41553568
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||| | |||| | ||||||||||| ||| |||||||||||||    
T  41553625 ttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttt 41553568  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 41553970 - 41553913
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||| | |||| | ||||||||||| ||| |||||||||||||    
T  41553970 ttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttt 41553913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 41554315 - 41554258
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||| | |||| | ||||||||||| ||| |||||||||||||    
T  41554315 ttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttt 41554258  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 715
Target Start/End: Complemental strand, 49149075 - 49149042
Alignment:
Q  682 ggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||||||||||| ||||||||||||||||||    
T  49149075 ggtggttttaagtcattttttgacctaaaatcac 49149042  T

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Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 632 - 722
Target Start/End: Complemental strand, 34878567 - 34878475
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatcta 722  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||  |||| |||||||||| |||| ||||||||||| |||||||||||||    
T  34878567 agaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcactcatcta 34878475  T

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Target: chr1; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 800
Target Start/End: Complemental strand, 29738932 - 29738765
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||| | ||| ||||||||||||||||||| |||||||  ||| |||||||||| |||| ||||| ||||| |||||| | ||||           
T  29738932 agaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctcta--catct 29738835  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttta 800  Q
     |||||||| ||  ||||||||||||||||||||| ||||| || |||||||||||| ||||||||||||||    
T  29738834 ttttcccctttt--tctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttta 29738765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 632 - 794
Target Start/End: Complemental strand, 51916948 - 51916787
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcat--cggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| ||| |||||| ||||||||||||||||||| |||||   |||| |||||||||| |  | |||||||||||||||||||||||||           
T  51916948 agaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacctaaaatcactcatctacatcttt 51916849  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtg 794  Q
     |||   ||||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  51916848 tttt---ctctt-ttctttcaatctaaataagtggttttcaaataaatcaagtttttccttttgtg 51916787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 7337959 - 7337793
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| |||||| ||| ||||||||||||||||||| |||||||  ||||  ||||| || |||| ||||||| ||| |||||| | ||||           
T  7337959 agaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgatctagaatcacccctcta---catc 7337863  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||  |||||| ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  7337862 ttttttcctctt-ttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 7337793  T

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Target: chr1; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 13144999 - 13144942
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  13144999 ttctttcaatctaaataagtggttttcatatatatcaactttttccttttgtgttttt 13144942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 722
Target Start/End: Complemental strand, 10776756 - 10776664
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatcta 722  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||  |||  ||||||||||  ||| ||||||||||| |||||| ||||||    
T  10776756 agaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcacccatcta 10776664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 23291830 - 23291773
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  23291830 ttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttt 23291773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 632 - 798
Target Start/End: Original strand, 31983976 - 31984141
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| ||| |||||||||||||| |||  ||||||  ||||||||||||||| |||| ||||||||||| || |||   ||||           
T  31983976 agaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctctctacatcttt 31984075  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgtttt 798  Q
     ||||||    | ||||||| |||||||||||||| ||||| ||||||||||||||||||| ||| ||||    
T  31984076 ttttccc----ttttctttcgatctaaataagtggttttcacatatatcaagtttttccttgtgtttttt 31984141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 632 - 709
Target Start/End: Complemental strand, 35484674 - 35484595
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaa 709  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| ||||||| || |||| ||||||||||||    
T  35484674 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttgacctaa 35484595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 743 - 798
Target Start/End: Complemental strand, 36894428 - 36894373
Alignment:
Q  743 ttctttcaatctaaataagtggtttcatatatatcaagtttttccttttgtgtttt 798  Q
    ||||||| ||||||||||||||||||| || |||||||||| ||||||||||||||    
T  36894428 ttctttcgatctaaataagtggtttcacatctatcaagtttctccttttgtgtttt 36894373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 743 - 796
Target Start/End: Original strand, 26535299 - 26535353
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgtt 796  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  26535299 ttctttcaatctaaataagtggttttcacatatattaagtttttccttttgtgtt 26535353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 1742185 - 1742242
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| ||||||| |||||    
T  1742185 ttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtattttt 1742242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 8212097 - 8212040
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||| |||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  8212097 ttctttaaatctaaataagtggttttcacatatatcaagttttcccttttgtgttttt 8212040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 11462634 - 11462577
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  11462634 ttctttcaatctaaataagtgggtttcacatctatcaagttttttcttttgtgttttt 11462577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 21947805 - 21947748
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||    
T  21947805 ttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 21947748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 32394903 - 32394960
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||| |||||||| || || ||||||||||||||||||||||||||    
T  32394903 ttctttcaatctaaatgagtggttttcacatctatcaagtttttccttttgtgttttt 32394960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 35462224 - 35462167
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||||||| || || ||||||||||||||||||||||||||    
T  35462224 ttctttcaatttaaataagtggttttcacatctatcaagtttttccttttgtgttttt 35462167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 634 - 722
Target Start/End: Original strand, 3228068 - 3228158
Alignment:
Q  634 aaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatcta 722  Q
    |||||||||||| ||  |||| ||| |||||||||||||||||  |||| |||||||||| |||| ||||| ||||| |||||| ||||||    
T  3228068 aaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcattttttaacctacaatcacccatcta 3228158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 5983632 - 5983799
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||  ||||| ||| |||||||| |||||||||| |||||||  ||||  ||||||||  ||| ||||||||||| |||||||| ||||           
T  5983632 agaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaatcactcgtcta-catctt 5983730  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     ||||||  ||| ||||||| |||||||||| ||| ||||| || |||||||||||| |||||||||||||    
T  5983731 ttttccc--ctttttctttcgatctaaataaatggttttcacatctatcaagtttttgcttttgtgttttt 5983799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 632 - 696
Target Start/End: Original strand, 41176978 - 41177044
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtca 696  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| ||||    
T  41176978 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca 41177044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 715
Target Start/End: Original strand, 45415355 - 45415440
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||| |||||| |||||||||||||||||| |||| || |||  |||| |||||||||| |||| ||||||| ||| ||||||    
T  45415355 agaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatcac 45415440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 15492195 - 15492252
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||| || ||| || ||||||||||||||| |||||||||||||    
T  15492195 ttctttcaatctaaataaatgattttcacatatatcaagttttttcttttgtgttttt 15492252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 653 - 715
Target Start/End: Original strand, 15836010 - 15836074
Alignment:
Q  653 aactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||||||||| || |||||||  ||||||||||||||| |||| ||||||||||| ||||||    
T  15836010 aactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcac 15836074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 27456446 - 27456503
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||  |||||| ||||| ||||||||||||||||    
T  27456446 ttctttcaatctaaataagtggttttcgcatatattaagttcttccttttgtgttttt 27456503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 747 - 799
Target Start/End: Complemental strand, 27580310 - 27580257
Alignment:
Q  747 ttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||    
T  27580310 ttcaatctatataagtggttttcacatatatcaagtttttccttttgtattttt 27580257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 31317655 - 31317712
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||| |||||||||||||| || | |||||||||||||| ||||||||||||    
T  31317655 ttctttcaatttaaataagtggttttcacacatatcaagtttttcattttgtgttttt 31317712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 31918894 - 31918951
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||| |||||||||||||||||||| || ||||||||||||||| ||||||| |||||    
T  31918894 ttctatcaatctaaataagtggttttcacatatatcaagttttttcttttgtattttt 31918951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 14872435 - 14872602
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcggagaggtg--gttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| | | | |||||||||||| ||||||||||||   |||||  |||||  |||| |||||||| || |||||||| ||||           
T  14872435 agaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaatcactcctctacatcttt 14872534  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
     ||||||   || |||||||||| ||||||||||||||  | | ||||||||||||||| |||||||||||    
T  14872535 ttttccc---tttttctttcaatgtaaataagtggtttttacaaatatcaagtttttccatttgtgttttt 14872602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 743 - 793
Target Start/End: Complemental strand, 15435060 - 15435009
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgt 793  Q
    ||||||||||||||||||||| ||| || ||| |||||||||||||||||||    
T  15435060 ttctttcaatctaaataagtgtttttcacataaatcaagtttttccttttgt 15435009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 714
Target Start/End: Original strand, 50377148 - 50377207
Alignment:
Q  656 tttctttctccttcattcatcggagagg-tggttttaagtcactttttgacctaaaatca 714  Q
    |||||||||||||| ||||||| ||||| |||||||| |||| ||||||||||| |||||    
T  50377148 tttctttctccttcgttcatcgaagaggatggttttaggtcattttttgacctagaatca 50377207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 656 - 799
Target Start/End: Original strand, 18939142 - 18939282
Alignment:
Q  656 tttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnntttcccctcttcttctttcaatc 753  Q
    ||||||||||||||||| ||||  |||||||||||||| |||| ||||||| ||| ||||||   ||| |       ||||||||    ||||||||||     
T  18939142 tttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacc--tctctgcatctttttcccct----ttctttcaatt 18939235  T
Q  754 taaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||| |||| || | |||||||||||||| ||||||||||||    
T  18939236 taaataagtagttttcacacatatcaagtttttcattttgtgttttt 18939282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 783
Target Start/End: Original strand, 1602020 - 1602061
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagttt 783  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  1602020 ttctttcgatctaaataagtggtttctatatatatcaagttt 1602061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 714
Target Start/End: Complemental strand, 15435168 - 15435084
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatca 714  Q
    |||||||||||||| |||  |||| |||||||| |||||||||||  |||| || ||||||| |||| ||||||| ||| |||||    
T  15435168 agaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgatctagaatca 15435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 35484578 - 35484521
Alignment:
Q  743 ttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||||||||||| ||||| || |||||||||||| |  ||||||||||    
T  35484578 ttctttcaatctaaataagtggttttcacatctatcaagttttttcaattgtgttttt 35484521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 37720308 - 37720252
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || ||| ||||||||||| |||||||||||||    
T  37720308 ttctttcaatctaaataagtgatttccacatacatcaagttttt-cttttgtgttttt 37720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 47132804 - 47132861
Alignment:
Q  743 ttctttcaatctaaataagtggtttc-atatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| |||| | ||||||||||| ||| |||||||| ||||    
T  47132804 ttctttcaatctaaataagtgatttctacatatatcaagtgttttcttttgtgctttt 47132861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 15285 - 15450
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| |||||| ||| ||||||||||||||||||| ||| |||  ||| |||||||||| |||| ||||||||||| |||||| | ||||           
T  15285 agaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgacctagaatcacccctcta--catct 15382  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| |||||   |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  15383 ttttccccttttctt---tcaatctaaataagtggttttcatatctttcaagtttttccttttgtgttttt 15450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 632 - 799
Target Start/End: Original strand, 50579 - 50745
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| | | ||||||||||||||||||| ||||| |  ||| |||| ||||| |||||||||||||||| |||||  | ||||           
T  50579 agaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgacctagaatcatccctcta-catctt 50677  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||||||| |||||   |||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  50678 ttttccccttttctt---tcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 50745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 2113 - 1948
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    |||||||||||||| | |  ||||||||||||| |||||||||| |  |||| ||| ||||| |||  ||||| |||||||||||||||||||           
T  2113 agaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgtgtttttaggtcttttttt-acctaaaatcactcatcta---catc 2018  T
Q  730 ntttcccctcttcttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
     |||  |||||| |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  2017 ttttttcctctt-ttctttcaatttaaataagtggtttgcacatatatcaagtttttccttttgtgttttt 1948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 632 - 799
Target Start/End: Complemental strand, 72160 - 71994
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnn 729  Q
    ||||||| |||||| ||| ||||||||||||||||||| ||||||  |||| |||||||||| |||| ||||||||||| |||||| ||| | |          
T  72160 agaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcac-cat-tcttcatct 72063  T
Q  730 ntttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
     ||||||| ||| ||||||||||| |||||||||| ||||| || |||||||||||||| |||||||||||    
T  72062 ttttcccc-ctt-ttctttcaatccaaataagtggttttcacatctatcaagtttttccatttgtgttttt 71994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 633 - 799
Target Start/End: Original strand, 1138 - 1302
Alignment:
Q  633 gaaactccaacttttctttaaactttctttctccttcattcatcg--gagaggtggttttaagtcactttttgacctaaaatcactcatctatnnnnnnn 730  Q
    |||||| |||||| ||| |||| |||||||||||||| |||||||  |||||||||||||| |||| ||||||||||| |||||| | ||||            
T  1138 gaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctcta-cttcttt 1236  T
Q  731 tttcccctcttcttctttcaatctaaataagtgg-tttcatatatatcaagtttttccttttgtgttttt 799  Q
    ||||||    | |||||||| ||||||||||||| ||||| ||||||||||||||  |||||||||||||    
T  1237 tttccc----ttttctttcactctaaataagtggttttcacatatatcaagttttctcttttgtgttttt 1302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 634 - 798
Target Start/End: Complemental strand, 31565 - 31401
Alignment:
Q  634 aaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcact-ttttgacctaaaatcactcatctatnnnnnnn 730  Q
    |||||||||||||||||||||||||||||||||||| ||||||  | ||  ||| ||||| |||| | |||| ||| |||||||||| ||||            
T  31565 aaactccaacttttctttaaactttctttctccttcgttcatcgagcaggagtgattttatgtcattgtttttaccaaaaatcactcctcta---catct 31469  T
Q  731 tttcccctcttcttctttcaatctaaataagt-ggtttcatatatatcaagtttttccttttgtgtttt 798  Q
    |||  |||||| |||||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||    
T  31468 tttttcctctt-ttctttcaatataaataagtagttttcacatatatcaagtttttccttttgtgtttt 31401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 656 - 799
Target Start/End: Original strand, 7534 - 7674
Alignment:
Q  656 tttctttctccttcattcatcggagagg--tggttttaagtcactttttgacctaaaatcactcatctatnnnnnnntttcccctcttcttctttcaatc 753  Q
    ||||||||||||| ||||||||  ||||  |||||||| |||| ||||||||||| ||||||||||||         || |||||    ||||||||||     
T  7534 tttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactcatct--gcatcttttacccct----ttctttcaatt 7627  T
Q  754 taaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  7628 taaataagtggttttcacatatatcaagtttttccttttgtgttttt 7674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 10228 - 10171
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  10228 ttctttccatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt 10171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 799
Target Start/End: Original strand, 37948 - 38005
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  37948 ttctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtgttttt 38005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 32935 - 32878
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  32935 ttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 32878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 631 - 715
Target Start/End: Original strand, 10671 - 10755
Alignment:
Q  631 cagaaactccaacttttctttaaactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||||| ||||| ||| ||||||| ||| ||||||||||||||  ||||||||||||||| ||||  |||||||||||| ||||    
T  10671 cagaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtca--ttttgacctaaagtcac 10755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 653 - 715
Target Start/End: Original strand, 12730 - 12794
Alignment:
Q  653 aactttctttctccttcattcatc--ggagaggtggttttaagtcactttttgacctaaaatcac 715  Q
    ||||||||||||| || |||||||  ||||||||||||||| |||| ||||||||||| ||||||    
T  12730 aactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcac 12794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 677
Target Start/End: Complemental strand, 15134 - 15089
Alignment:
Q  632 agaaactccaacttttctttaaactttctttctccttcattcatcg 677  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||    
T  15134 agaaactccaatttctctctaaactttctttctccttcattcatcg 15089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 744 - 796
Target Start/End: Original strand, 7978 - 8031
Alignment:
Q  744 tctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgtt 796  Q
    |||||| |||||||| |||||||| || || |||||||||||||||||||||||    
T  7978 tctttcgatctaaattagtggttttcacatctatcaagtttttccttttgtgtt 8031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 799
Target Start/End: Complemental strand, 58267 - 58210
Alignment:
Q  743 ttctttcaatctaaataagtggttt-catatatatcaagtttttccttttgtgttttt 799  Q
    ||||||||||||||||||||| ||| || ||||||||||| ||| |||||||| ||||    
T  58267 ttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 58210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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