View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5873_high_15 (Length: 238)
Name: NF5873_high_15
Description: NF5873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5873_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 41056694 - 41056830
Alignment:
| Q |
1 |
tttaaagtatggtaataattacattttaatttttgtttggatggattgaaattgatatagctttcagagcctctgactggaaaggtctggacattggaag |
100 |
Q |
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| T |
41056694 |
tttaaagtatggtaataattacattttaatttttgtttggatggattgaaattgatatagctttcagagcctctgactggaaaggtctggacattggaag |
41056793 |
T |
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| Q |
101 |
attttgaggctcatccagctctattggtaggattctg |
137 |
Q |
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| T |
41056794 |
attttgaggctcatccagctctattggtaggattctg |
41056830 |
T |
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