View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5874-Insertion-1 (Length: 985)

Name: NF5874-Insertion-1
Description: NF5874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5874-Insertion-1
NF5874-Insertion-1
[»] chr4 (9 HSPs)
chr4 (522-967)||(40818918-40819386)
chr4 (9-293)||(40818228-40818493)
chr4 (312-498)||(40818711-40818896)
chr4 (522-598)||(7984524-7984600)
chr4 (522-596)||(7328083-7328157)
chr4 (522-596)||(29275981-29276055)
chr4 (522-595)||(42243861-42243934)
chr4 (537-596)||(32270446-32270505)
chr4 (540-587)||(748594-748641)
[»] chr5 (5 HSPs)
chr5 (522-598)||(35885758-35885834)
chr5 (522-595)||(3432374-3432447)
chr5 (522-595)||(16167773-16167846)
chr5 (522-594)||(4630394-4630466)
chr5 (522-561)||(18511011-18511050)
[»] chr2 (3 HSPs)
chr2 (522-598)||(5246066-5246142)
chr2 (522-595)||(43903879-43903952)
chr2 (522-573)||(44030359-44030410)
[»] chr1 (3 HSPs)
chr1 (522-598)||(31972643-31972719)
chr1 (537-587)||(395465-395515)
chr1 (522-587)||(29529073-29529137)
[»] chr8 (4 HSPs)
chr8 (522-596)||(4362757-4362831)
chr8 (522-596)||(12132469-12132543)
chr8 (522-596)||(14694828-14694902)
chr8 (522-595)||(33332316-33332389)
[»] chr7 (7 HSPs)
chr7 (522-596)||(9901987-9902061)
chr7 (522-596)||(28029718-28029792)
chr7 (522-596)||(36430593-36430667)
chr7 (522-594)||(21515991-21516063)
chr7 (537-587)||(18343920-18343970)
chr7 (537-587)||(18344823-18344873)
chr7 (537-587)||(18347449-18347499)
[»] chr3 (1 HSPs)
chr3 (537-587)||(45082763-45082813)


Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 522 - 967
Target Start/End: Original strand, 40818918 - 40819386
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttatatttacatttttgtatatattac 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | | | ||||||||||||     
T  40818918 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttatgttcataatcttgtatatattag 40819017  T
Q  622 acataattctagttacttagtagatgatat---------cttttccaccgagtcctctatgtgggttgatatcattt-aatgcaattattgccacctgat 711  Q
    | ||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40819018 agataattctagttacttagtagatgatatattctctttcttttccaccgagtcctctatgtgggttgatatcattttaatgcaattattgccacctgat 40819117  T
Q  712 ttgtttgaaatcgcctttttagattggatgaatgtaccaaaattatc-aatatgtttggatacaagtttgtaaaatgacgtttgtttaaatctcattcta 810  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40819118 ttgtttgaaatcgcctttttagattggatgaatgtacaaaaattatcaaatatgtttggatacaagtttgtaaaattacgtttgtttaaatctcattcta 40819217  T
Q  811 taaacttcatttgatt-aaatgtgttgttctaacttttctttctg-tttataaatagtttgctcc-actagatt-acatttggacga-ttttct-aaacg 904  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||| |||||| ||||| |||||| |||||    
T  40819218 taaacttcatttgattaaaacgtgttgttctaac-tttctttctgttttataaatagtttgctccaactagattaacattttgacgatttttctaaaacg 40819316  T
Q  905 tatttcca--caaaaatgtaattta-ttggattatatac--ttttttaggcaaa--taattcatatcatt 967  Q
    ||||||||   |||||||||||||| |||||||||||||  |||||||||||||   |||||||||||||    
T  40819317 tatttccaacaaaaaatgtaatttatttggattatatacctttttttaggcaaaataaattcatatcatt 40819386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 9 - 293
Target Start/End: Original strand, 40818228 - 40818493
Alignment:
Q  9 ttattctttcattcacggagtataagtttaccttttcactggcgagggggtctgaaacatgtggcacatggtttagtgatgtaacttatattgtagcata 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||||||||||||    
T  40818228 ttattctttcattcatggagtataagtttaccttttcactggcgagggggtctgaaacat------------------atgtaacttatattgtagcata 40818309  T
Q  109 aaaaattatctatggacatccgaacatcttatcttgaaagagaaagaaatacagaaaatgatttagtaaatatgatatgttgatgatgtagtaagaagag 208  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  40818310 aaaaattatctatggacatccgaacatcttattttgaaagagaaagaaatacagataatgatttagtaaatataatatgtt-atgatgtagtaagaagag 40818408  T
Q  209 tgataaatagaaaatacaacgttgtttttgtgagcataactcagttgatagtgacattataatatgcaggagttaaagttcgaat 293  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  40818409 tgataaatagaaaatacgatgttgtttttgtgagcataactcaattgatagtgacattataatatgcaggagttatagttcgaat 40818493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 312 - 498
Target Start/End: Original strand, 40818711 - 40818896
Alignment:
Q  312 aagaaatatactagtcagttgtaattacaaatagtttgatgaatttaggaagaaaattgaggcataaataccaaaggaagttgcttgctgcgtagggtta 411  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40818711 aagaaaaatactagtcagttgtaattacaaatagtttgatgaatttaggaagaaaattgaggcataaataccaaaggaagttgcttgctgcgtaggatta 40818810  T
Q  412 aggatccctaaag-agaaagggtttaaggatccctaaaaaatctgaatccaaaacaatgcaataaaaacgcattatccttatcttgct 498  Q
    ||||||||||||| | ||||||||||||||    ||||   |||||||||| |||||||||||||||| ||||| | ||||| |||||    
T  40818811 aggatccctaaagaaaaaagggtttaagga--attaaattgtctgaatccagaacaatgcaataaaaatgcatttttcttattttgct 40818896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 522 - 598
Target Start/End: Complemental strand, 7984600 - 7984524
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttat 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7984600 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttat 7984524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 596
Target Start/End: Original strand, 7328083 - 7328157
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7328083 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 7328157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 596
Target Start/End: Original strand, 29275981 - 29276055
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29275981 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 29276055  T

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Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 522 - 595
Target Start/End: Complemental strand, 42243934 - 42243861
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42243934 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 42243861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 32270505 - 32270446
Alignment:
Q  537 tcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32270505 tcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 32270446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 587
Target Start/End: Complemental strand, 748641 - 748594
Alignment:
Q  540 aacccacgaccacaaggttaagagccttgcgctctaccaactgagcta 587  Q
    |||||||||||||| |||||| |||| |||||||||||| ||||||||    
T  748641 aacccacgaccacatggttaaaagccatgcgctctaccagctgagcta 748594  T

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Target: chr5 (Bit Score: 77; Significance: 3e-35; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 522 - 598
Target Start/End: Original strand, 35885758 - 35885834
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttat 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35885758 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttat 35885834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 522 - 595
Target Start/End: Complemental strand, 3432447 - 3432374
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3432447 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 3432374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 522 - 595
Target Start/End: Complemental strand, 16167846 - 16167773
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16167846 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 16167773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 522 - 594
Target Start/End: Complemental strand, 4630466 - 4630394
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggc 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4630466 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggc 4630394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 522 - 561
Target Start/End: Complemental strand, 18511050 - 18511011
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaag 561  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  18511050 cgcccaccgtggggctcgaacccacgaccacgaggttaag 18511011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 3e-35; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 522 - 598
Target Start/End: Complemental strand, 5246142 - 5246066
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttat 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5246142 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttat 5246066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 522 - 595
Target Start/End: Original strand, 43903879 - 43903952
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43903879 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 43903952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 522 - 573
Target Start/End: Complemental strand, 44030410 - 44030359
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctc 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44030410 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctc 44030359  T

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Target: chr1 (Bit Score: 77; Significance: 3e-35; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 522 - 598
Target Start/End: Original strand, 31972643 - 31972719
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttat 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31972643 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggcttat 31972719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 537 - 587
Target Start/End: Original strand, 395465 - 395515
Alignment:
Q  537 tcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagcta 587  Q
    ||||||||||||||||| |||||| |||| |||||||||||| ||||||||    
T  395465 tcgaacccacgaccacacggttaaaagccgtgcgctctaccagctgagcta 395515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 522 - 587
Target Start/End: Original strand, 29529073 - 29529137
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagcta 587  Q
    |||| ||||||||| ||||||||||||||||  |||||| ||||  |||||||||| |||||||||    
T  29529073 cgccgaccgtggggatcgaacccacgaccacgtggttaaaagccacgcgctctacc-actgagcta 29529137  T

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Target: chr8 (Bit Score: 75; Significance: 5e-34; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 596
Target Start/End: Original strand, 4362757 - 4362831
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4362757 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 4362831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 596
Target Start/End: Complemental strand, 12132543 - 12132469
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12132543 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 12132469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 596
Target Start/End: Complemental strand, 14694902 - 14694828
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14694902 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 14694828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 522 - 595
Target Start/End: Original strand, 33332316 - 33332389
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33332316 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggct 33332389  T

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Target: chr7 (Bit Score: 75; Significance: 5e-34; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 596
Target Start/End: Complemental strand, 9902061 - 9901987
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9902061 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 9901987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 596
Target Start/End: Original strand, 28029718 - 28029792
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28029718 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 28029792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 522 - 596
Target Start/End: Original strand, 36430593 - 36430667
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36430593 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggctt 36430667  T

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Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 522 - 594
Target Start/End: Complemental strand, 21516063 - 21515991
Alignment:
Q  522 cgcccaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggc 594  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21516063 cgcctaccgtggggctcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagctagacgggc 21515991  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 537 - 587
Target Start/End: Complemental strand, 18343970 - 18343920
Alignment:
Q  537 tcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagcta 587  Q
    ||||||||||||||||| |||||| |||| |||||||||||| ||||||||    
T  18343970 tcgaacccacgaccacatggttaaaagccatgcgctctaccagctgagcta 18343920  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 537 - 587
Target Start/End: Complemental strand, 18344873 - 18344823
Alignment:
Q  537 tcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagcta 587  Q
    ||||||||||||||||| |||||| |||| |||||||||||| ||||||||    
T  18344873 tcgaacccacgaccacatggttaaaagccatgcgctctaccagctgagcta 18344823  T

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Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 537 - 587
Target Start/End: Complemental strand, 18347499 - 18347449
Alignment:
Q  537 tcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagcta 587  Q
    ||||||||||||||||| |||||| |||| |||||||||||| ||||||||    
T  18347499 tcgaacccacgaccacatggttaaaagccatgcgctctaccagctgagcta 18347449  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 537 - 587
Target Start/End: Original strand, 45082763 - 45082813
Alignment:
Q  537 tcgaacccacgaccacaaggttaagagccttgcgctctaccaactgagcta 587  Q
    ||||||||||||||||| |||||| |||| |||||||||||| ||||||||    
T  45082763 tcgaacccacgaccacatggttaaaagccatgcgctctaccagctgagcta 45082813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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