View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5875-Insertion-7 (Length: 212)
Name: NF5875-Insertion-7
Description: NF5875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5875-Insertion-7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 9 - 212
Target Start/End: Original strand, 46565160 - 46565363
Alignment:
| Q |
9 |
tatattccgcaacaacatcaattttaagaattgaaagacattcttaatgcatgtttgtatcacaatgaatttatcacagtcgctcatcaaaattcagtta |
108 |
Q |
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| T |
46565160 |
tatattccgcaacaacatcaattttaagaattgaaagacattcttaatgcatgtttgtatcacaatgaatttatcacagtcgctcatcaaaattcaaaat |
46565259 |
T |
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| Q |
109 |
aaatttatcatgaattcaaacattaagtacttaccatagtaccatcactcgtaagccatttctactacatctctatttttagttttcaattttaacatct |
208 |
Q |
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| T |
46565260 |
tcagttaaaatgaattcaaacattaagtacttaccatagtagcatcactcgtaagccatttctattacatctctatttttagttttcaattttaacatct |
46565359 |
T |
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| Q |
209 |
atga |
212 |
Q |
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|||| |
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| T |
46565360 |
atga |
46565363 |
T |
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