View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5876-Insertion-12 (Length: 265)
Name: NF5876-Insertion-12
Description: NF5876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5876-Insertion-12 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 9 - 234
Target Start/End: Complemental strand, 15198261 - 15198036
Alignment:
| Q |
9 |
gttccaaacaacatattttgaagatcgaaacagtgatggcaacagggacacaagcatacggtgaatcatggtactgggacaaccgttacacaaacgaacc |
108 |
Q |
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| T |
15198261 |
gttccaaacaacatattttgaagatcgaaacagtgatggcaacaggtacacaagcatacggtgaatcatggtactgggacaaccgttacacaaacgaacc |
15198162 |
T |
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| Q |
109 |
tggtccttttgattggtaccaaaagtatattactttgtctcctatcatcaatctctatgttcccaagaaccaatctatccttgttgttggttctggtaat |
208 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15198161 |
tggtccttttgattggtaccaaaagtatattactttggctcctatcatcaatctctatgttcccaagaaccaatctatccttgttgttggttctggtaat |
15198062 |
T |
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| Q |
209 |
tcaggcaagtcaatccaaaaatacca |
234 |
Q |
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|||||||||||||||||||||||||| |
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| T |
15198061 |
tcaggcaagtcaatccaaaaatacca |
15198036 |
T |
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