View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5876_high_31 (Length: 351)

Name: NF5876_high_31
Description: NF5876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5876_high_31
NF5876_high_31
[»] chr5 (52 HSPs)
chr5 (15-125)||(31705399-31705511)
chr5 (20-125)||(38528024-38528131)
chr5 (15-125)||(24886363-24886475)
chr5 (15-122)||(5830168-5830278)
chr5 (20-123)||(22255463-22255568)
chr5 (15-125)||(39573087-39573199)
chr5 (20-125)||(2888232-2888339)
chr5 (15-123)||(22973871-22973981)
chr5 (15-123)||(35511271-35511381)
chr5 (15-123)||(35826275-35826385)
chr5 (15-125)||(25669852-25669964)
chr5 (15-125)||(33908509-33908620)
chr5 (15-125)||(35504641-35504753)
chr5 (20-125)||(15992327-15992434)
chr5 (20-125)||(17157818-17157925)
chr5 (24-125)||(31786433-31786536)
chr5 (20-123)||(7693502-7693607)
chr5 (20-123)||(8467007-8467112)
chr5 (15-122)||(12910631-12910740)
chr5 (20-123)||(22981074-22981179)
chr5 (20-122)||(699431-699535)
chr5 (15-125)||(27330580-27330692)
chr5 (15-125)||(42342997-42343109)
chr5 (20-125)||(8437246-8437353)
chr5 (20-125)||(35934177-35934284)
chr5 (20-125)||(43308447-43308554)
chr5 (15-123)||(7208653-7208763)
chr5 (21-125)||(19120141-19120247)
chr5 (18-125)||(9200503-9200612)
chr5 (15-125)||(8741672-8741784)
chr5 (24-122)||(25889655-25889755)
chr5 (20-125)||(22019904-22020011)
chr5 (20-125)||(28416338-28416445)
chr5 (21-125)||(5837837-5837943)
chr5 (20-123)||(36860705-36860810)
chr5 (15-125)||(32563416-32563528)
chr5 (20-125)||(14409128-14409235)
chr5 (20-125)||(15724769-15724876)
chr5 (20-125)||(40133666-40133773)
chr5 (38-122)||(43254154-43254240)
chr5 (18-123)||(30969113-30969220)
chr5 (22-125)||(13956151-13956254)
chr5 (20-123)||(36867043-36867148)
chr5 (20-125)||(25500713-25500820)
chr5 (20-71)||(1429005-1429056)
chr5 (20-125)||(23116017-23116116)
chr5 (27-123)||(27318277-27318376)
chr5 (27-126)||(26269097-26269198)
chr5 (24-105)||(21088576-21088656)
chr5 (40-125)||(23954589-23954669)
chr5 (47-125)||(14919326-14919405)
chr5 (15-66)||(6824329-6824380)
[»] chr1 (53 HSPs)
chr1 (20-125)||(2960025-2960132)
chr1 (15-125)||(11742160-11742272)
chr1 (15-125)||(28564575-28564687)
chr1 (20-125)||(10923004-10923111)
chr1 (20-125)||(22170988-22171095)
chr1 (20-125)||(37451562-37451669)
chr1 (15-122)||(19899563-19899673)
chr1 (20-123)||(23999624-23999730)
chr1 (15-123)||(30254695-30254805)
chr1 (15-125)||(8222400-8222512)
chr1 (20-123)||(32216332-32216437)
chr1 (20-123)||(34012176-34012281)
chr1 (15-125)||(14758304-14758416)
chr1 (24-125)||(15383214-15383318)
chr1 (23-125)||(32267314-32267418)
chr1 (20-125)||(46931686-46931794)
chr1 (20-125)||(9902846-9902953)
chr1 (15-123)||(25160904-25161015)
chr1 (20-125)||(28769930-28770037)
chr1 (20-125)||(47279466-47279573)
chr1 (20-126)||(3309430-3309539)
chr1 (15-122)||(16415918-16416027)
chr1 (15-125)||(1547543-1547655)
chr1 (15-125)||(15168368-15168480)
chr1 (20-122)||(27227280-27227384)
chr1 (15-125)||(27532774-27532885)
chr1 (20-125)||(27763102-27763210)
chr1 (20-125)||(48353819-48353926)
chr1 (18-122)||(21289875-21289981)
chr1 (20-123)||(3535200-3535305)
chr1 (15-117)||(30326751-30326856)
chr1 (24-123)||(39393665-39393766)
chr1 (15-125)||(51129131-51129241)
chr1 (15-123)||(42721308-42721418)
chr1 (20-122)||(4330558-4330662)
chr1 (20-122)||(10181802-10181906)
chr1 (20-122)||(27563700-27563804)
chr1 (20-125)||(238305-238412)
chr1 (20-123)||(38823491-38823596)
chr1 (14-103)||(18422922-18423006)
chr1 (20-122)||(27266995-27267099)
chr1 (20-125)||(7078855-7078962)
chr1 (15-123)||(15752301-15752411)
chr1 (27-125)||(31962900-31963001)
chr1 (15-105)||(40885085-40885177)
chr1 (20-105)||(1359747-1359834)
chr1 (24-125)||(47682286-47682389)
chr1 (15-125)||(31621340-31621453)
chr1 (20-122)||(41926434-41926537)
chr1 (15-117)||(37618705-37618805)
chr1 (53-125)||(48620906-48620973)
chr1 (53-125)||(33725403-33725478)
chr1 (24-56)||(38759814-38759846)
[»] chr4 (49 HSPs)
chr4 (15-126)||(35025389-35025501)
chr4 (18-125)||(34361314-34361424)
chr4 (15-125)||(25184389-25184501)
chr4 (15-125)||(32579722-32579834)
chr4 (20-125)||(6864316-6864423)
chr4 (20-125)||(23431836-23431943)
chr4 (15-123)||(19440473-19440583)
chr4 (20-123)||(879373-879478)
chr4 (15-125)||(3042895-3043007)
chr4 (18-123)||(27396895-27397000)
chr4 (20-121)||(19089280-19089383)
chr4 (20-125)||(33816339-33816446)
chr4 (20-121)||(37663568-37663671)
chr4 (24-125)||(50697527-50697630)
chr4 (29-125)||(46883937-46884035)
chr4 (15-123)||(50764996-50765106)
chr4 (18-125)||(23761350-23761459)
chr4 (15-125)||(29584023-29584135)
chr4 (15-125)||(30002464-30002576)
chr4 (20-125)||(32912402-32912510)
chr4 (20-125)||(7703790-7703897)
chr4 (20-125)||(39400289-39400396)
chr4 (24-125)||(46887981-46888084)
chr4 (15-123)||(33341674-33341784)
chr4 (15-123)||(37775934-37776044)
chr4 (21-125)||(47254022-47254128)
chr4 (15-123)||(55477716-55477826)
chr4 (24-123)||(1815586-1815687)
chr4 (15-125)||(37288004-37288117)
chr4 (15-125)||(17272240-17272352)
chr4 (15-125)||(28002809-28002921)
chr4 (15-120)||(34947923-34948030)
chr4 (15-125)||(4205260-4205372)
chr4 (15-125)||(17167989-17168101)
chr4 (15-125)||(49376243-49376355)
chr4 (20-125)||(7152027-7152134)
chr4 (15-123)||(4598258-4598368)
chr4 (30-123)||(26896378-26896474)
chr4 (15-125)||(55240928-55241040)
chr4 (15-122)||(9139505-9139612)
chr4 (20-125)||(32592365-32592472)
chr4 (20-125)||(36493512-36493619)
chr4 (45-125)||(38012568-38012650)
chr4 (15-125)||(17173566-17173678)
chr4 (20-123)||(35020856-35020965)
chr4 (20-125)||(42200011-42200118)
chr4 (15-125)||(5047789-5047901)
chr4 (27-125)||(25700879-25700979)
chr4 (30-125)||(4934035-4934133)
[»] chr3 (53 HSPs)
chr3 (20-123)||(46297561-46297666)
chr3 (15-125)||(22622515-22622627)
chr3 (15-125)||(4015726-4015838)
chr3 (20-122)||(11357181-11357285)
chr3 (15-125)||(26941057-26941169)
chr3 (18-125)||(54506077-54506187)
chr3 (15-125)||(37157975-37158087)
chr3 (15-125)||(40552056-40552168)
chr3 (20-125)||(47481794-47481902)
chr3 (20-125)||(29099618-29099725)
chr3 (24-125)||(39282928-39283031)
chr3 (20-121)||(42505876-42505979)
chr3 (14-125)||(3654996-3655112)
chr3 (19-125)||(36012410-36012519)
chr3 (15-125)||(22451235-22451347)
chr3 (20-125)||(14586477-14586584)
chr3 (20-125)||(37203340-37203447)
chr3 (20-125)||(48355213-48355320)
chr3 (20-123)||(21009600-21009706)
chr3 (24-123)||(1089969-1090070)
chr3 (15-122)||(52040722-52040831)
chr3 (15-122)||(53228952-53229061)
chr3 (15-125)||(24707912-24708024)
chr3 (21-122)||(3362528-3362631)
chr3 (18-123)||(4761447-4761554)
chr3 (20-123)||(29164081-29164179)
chr3 (20-124)||(44186315-44186421)
chr3 (21-123)||(44891770-44891874)
chr3 (20-125)||(21193879-21193986)
chr3 (20-125)||(43975689-43975796)
chr3 (21-125)||(40936246-40936352)
chr3 (20-123)||(7327281-7327386)
chr3 (20-91)||(51212602-51212675)
chr3 (47-125)||(20373060-20373140)
chr3 (20-122)||(22445865-22445969)
chr3 (15-125)||(33378582-33378694)
chr3 (20-125)||(33698425-33698532)
chr3 (20-125)||(2008204-2008318)
chr3 (20-91)||(46994492-46994565)
chr3 (20-125)||(50475083-50475197)
chr3 (20-123)||(24488761-24488866)
chr3 (18-123)||(25580009-25580116)
chr3 (20-89)||(32373742-32373813)
chr3 (15-71)||(54828554-54828610)
chr3 (20-125)||(11356955-11357054)
chr3 (20-99)||(34133207-34133288)
chr3 (20-63)||(45174778-45174821)
chr3 (24-99)||(38591974-38592051)
chr3 (76-125)||(35844577-35844626)
chr3 (40-105)||(27480175-27480242)
chr3 (46-125)||(11467115-11467189)
chr3 (20-63)||(11835494-11835537)
chr3 (20-61)||(53811597-53811638)
[»] chr2 (37 HSPs)
chr2 (20-123)||(26357858-26357963)
chr2 (23-125)||(35959176-35959280)
chr2 (20-125)||(41961121-41961228)
chr2 (20-125)||(43648060-43648167)
chr2 (24-123)||(2325195-2325296)
chr2 (20-125)||(11366195-11366303)
chr2 (28-125)||(33660192-33660291)
chr2 (24-125)||(33709047-33709150)
chr2 (20-125)||(43770663-43770770)
chr2 (20-123)||(4763912-4764017)
chr2 (15-126)||(5881805-5881918)
chr2 (15-125)||(18494096-18494208)
chr2 (20-125)||(7006753-7006860)
chr2 (20-125)||(19289138-19289245)
chr2 (21-125)||(19424457-19424563)
chr2 (14-125)||(37905985-37906099)
chr2 (15-125)||(41465777-41465889)
chr2 (15-125)||(3177215-3177327)
chr2 (26-116)||(19500739-19500831)
chr2 (20-125)||(4167203-4167310)
chr2 (20-99)||(27349789-27349870)
chr2 (20-125)||(31862133-31862240)
chr2 (27-123)||(31570551-31570649)
chr2 (15-125)||(44913940-44914055)
chr2 (21-123)||(33550800-33550908)
chr2 (20-89)||(4478646-4478717)
chr2 (20-125)||(13711740-13711847)
chr2 (18-71)||(19314126-19314179)
chr2 (15-125)||(39167184-39167296)
chr2 (41-122)||(29241963-29242046)
chr2 (42-123)||(33902317-33902400)
chr2 (20-125)||(41051115-41051222)
chr2 (15-90)||(4263926-4264003)
chr2 (27-125)||(18257353-18257453)
chr2 (73-125)||(45328026-45328078)
chr2 (20-71)||(44286230-44286281)
chr2 (20-123)||(41463407-41463512)
[»] chr8 (38 HSPs)
chr8 (20-125)||(16446678-16446785)
chr8 (20-125)||(23854234-23854341)
chr8 (15-125)||(38644253-38644365)
chr8 (15-125)||(43643398-43643510)
chr8 (20-125)||(1149435-1149542)
chr8 (20-125)||(37970322-37970429)
chr8 (15-123)||(16223138-16223248)
chr8 (15-123)||(24823199-24823309)
chr8 (15-123)||(34895237-34895347)
chr8 (19-125)||(44869776-44869884)
chr8 (20-105)||(6098336-6098423)
chr8 (20-125)||(35459514-35459621)
chr8 (28-125)||(35859222-35859321)
chr8 (15-125)||(8803619-8803732)
chr8 (20-122)||(4132492-4132596)
chr8 (15-125)||(5299749-5299861)
chr8 (15-125)||(7890760-7890872)
chr8 (20-125)||(466112-466219)
chr8 (15-125)||(27082641-27082753)
chr8 (20-125)||(12587862-12587969)
chr8 (20-123)||(11727304-11727409)
chr8 (20-123)||(39098924-39099029)
chr8 (15-125)||(34951860-34951972)
chr8 (15-125)||(36694769-36694881)
chr8 (20-123)||(1205207-1205312)
chr8 (20-123)||(10555010-10555114)
chr8 (15-125)||(33906487-33906597)
chr8 (15-125)||(18259354-18259466)
chr8 (24-125)||(1953791-1953894)
chr8 (15-123)||(12876385-12876495)
chr8 (20-91)||(1149757-1149830)
chr8 (20-125)||(30654386-30654493)
chr8 (15-125)||(33198077-33198189)
chr8 (15-125)||(40862694-40862807)
chr8 (20-125)||(31933689-31933796)
chr8 (41-125)||(41362723-41362809)
chr8 (40-123)||(43025974-43026059)
chr8 (20-99)||(9864428-9864509)
[»] chr7 (46 HSPs)
chr7 (18-125)||(24211995-24212105)
chr7 (20-123)||(18797583-18797688)
chr7 (15-122)||(37110125-37110234)
chr7 (15-125)||(26587890-26588002)
chr7 (20-125)||(9355624-9355731)
chr7 (15-122)||(17842385-17842494)
chr7 (15-125)||(31578862-31578974)
chr7 (15-125)||(35353359-35353471)
chr7 (20-125)||(29173778-29173885)
chr7 (20-121)||(30055783-30055886)
chr7 (15-125)||(22687482-22687594)
chr7 (20-117)||(27284000-27284100)
chr7 (15-125)||(46480927-46481039)
chr7 (20-125)||(37703296-37703403)
chr7 (20-116)||(37704438-37704536)
chr7 (24-125)||(7335053-7335156)
chr7 (20-125)||(10481861-10481968)
chr7 (20-117)||(11071459-11071558)
chr7 (20-125)||(31520539-31520646)
chr7 (15-123)||(32820853-32820963)
chr7 (15-123)||(48928097-48928207)
chr7 (15-125)||(8861536-8861648)
chr7 (23-125)||(43925354-43925458)
chr7 (20-125)||(6546775-6546882)
chr7 (20-125)||(10359012-10359119)
chr7 (14-123)||(25691344-25691455)
chr7 (20-125)||(37347277-37347384)
chr7 (20-125)||(34361974-34362083)
chr7 (15-125)||(5657278-5657391)
chr7 (20-123)||(15612559-15612664)
chr7 (15-125)||(41764876-41764988)
chr7 (20-118)||(44411345-44411445)
chr7 (20-125)||(4583175-4583282)
chr7 (27-123)||(23111455-23111553)
chr7 (20-91)||(12165999-12166072)
chr7 (15-122)||(12390450-12390559)
chr7 (20-125)||(15672557-15672664)
chr7 (20-125)||(26980562-26980669)
chr7 (52-125)||(38258867-38258942)
chr7 (15-123)||(32432703-32432813)
chr7 (15-70)||(33688117-33688172)
chr7 (20-125)||(21991892-21991990)
chr7 (15-125)||(32593005-32593116)
chr7 (15-71)||(44598917-44598971)
chr7 (15-73)||(27421217-27421275)
chr7 (20-54)||(43686296-43686330)
[»] chr6 (15 HSPs)
chr6 (20-123)||(6090980-6091085)
chr6 (20-125)||(3879735-3879842)
chr6 (21-117)||(4318626-4318724)
chr6 (15-125)||(20768358-20768470)
chr6 (15-123)||(1946110-1946221)
chr6 (15-125)||(7234828-7234943)
chr6 (20-125)||(8513509-8513609)
chr6 (15-125)||(33892808-33892920)
chr6 (20-123)||(5627672-5627778)
chr6 (20-125)||(6089184-6089284)
chr6 (20-125)||(7054568-7054676)
chr6 (15-123)||(33619106-33619219)
chr6 (27-123)||(21016916-21017014)
chr6 (20-125)||(29182445-29182549)
chr6 (77-118)||(33724062-33724103)
[»] scaffold0002 (3 HSPs)
scaffold0002 (15-125)||(408226-408338)
scaffold0002 (20-123)||(93900-94004)
scaffold0002 (23-125)||(412-516)
[»] scaffold0291 (1 HSPs)
scaffold0291 (15-121)||(8163-8271)
[»] scaffold0318 (1 HSPs)
scaffold0318 (15-123)||(12185-12294)
[»] scaffold0061 (1 HSPs)
scaffold0061 (15-125)||(44232-44344)
[»] scaffold0017 (1 HSPs)
scaffold0017 (15-125)||(154443-154555)
[»] scaffold0022 (1 HSPs)
scaffold0022 (20-125)||(145812-145920)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-71)||(100996-101045)
[»] scaffold0008 (1 HSPs)
scaffold0008 (15-125)||(267561-267664)


Alignment Details
Target: chr5 (Bit Score: 86; Significance: 5e-41; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 31705511 - 31705399
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | |||    
T  31705511 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaa 31705412  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  31705411 attaactttttca 31705399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 38528131 - 38528024
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  38528131 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 38528032  T
Q  118 ctttttca 125  Q
    ||||||||    
T  38528031 ctttttca 38528024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 24886363 - 24886475
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  |||||    
T  24886363 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaa 24886462  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  24886463 attaactttttca 24886475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 5830168 - 5830278
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat-aaatcaaacattaaattcaa 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||| ||||    
T  5830168 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaa 5830267  T
Q  112 aattaactttt 122  Q
    |||||||||||    
T  5830268 aattaactttt 5830278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 22255463 - 22255568
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  22255463 taagtccaagatgttgcaagccttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 22255562  T
Q  118 cttttt 123  Q
    ||||||    
T  22255563 cttttt 22255568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 39573087 - 39573199
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  39573087 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 39573186  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  39573187 attaactttttca 39573199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 2888339 - 2888232
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | ||||||||    
T  2888339 taagtccaagatgttacaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaa 2888240  T
Q  118 ctttttca 125  Q
    ||||||||    
T  2888239 ctttttca 2888232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 22973981 - 22973871
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  22973981 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 22973882  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  22973881 attaacttttt 22973871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 35511381 - 35511271
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||    
T  35511381 acatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaa 35511282  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  35511281 attaacttttt 35511271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 35826385 - 35826275
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||||  |||||    
T  35826385 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaa 35826286  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  35826285 attaacttttt 35826275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 25669852 - 25669964
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| || |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | |||    
T  25669852 acatgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaa 25669951  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  25669952 attaactttttca 25669964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 33908509 - 33908620
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  |||||    
T  33908509 acatgtaagtccaagatgttgcaagcattactagat-aattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcaaa 33908607  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  33908608 attaactttttca 33908620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 35504641 - 35504753
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||  ||||||||||||||||| |||||||||||||| |||||    
T  35504641 acatgtaagtccaagatgttgcaagtattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaa 35504740  T
Q  113 attaactttttca 125  Q
    ||| |||||||||    
T  35504741 attgactttttca 35504753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 15992434 - 15992327
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||| |||||||||||||  | ||||||||    
T  15992434 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagattaaaattaa 15992335  T
Q  118 ctttttca 125  Q
    ||||||||    
T  15992334 ctttttca 15992327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 17157925 - 17157818
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||| || |    
T  17157925 taagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaacttga 17157826  T
Q  118 ctttttca 125  Q
    ||||||||    
T  17157825 ctttttca 17157818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 31786536 - 31786433
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||||||    
T  31786536 tccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaatatcaaaattaacttt 31786437  T
Q  122 ttca 125  Q
    ||||    
T  31786436 ttca 31786433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 7693502 - 7693607
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||| |||||||||||||| | ||||||||    
T  7693502 taagtctaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaa 7693601  T
Q  118 cttttt 123  Q
    ||||||    
T  7693602 cttttt 7693607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 8467007 - 8467112
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||   ||||||||    
T  8467007 taagtccaaaatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacagtttaaaaatgaatcaaacattaaaaataaaattaa 8467106  T
Q  118 cttttt 123  Q
    ||||||    
T  8467107 cttttt 8467112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 12910631 - 12910740
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||| |||||||||||||  ||| |    
T  12910631 acatgtaagtccaagatgttgcaagcattactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcata 12910730  T
Q  113 attaactttt 122  Q
    ||||||||||    
T  12910731 attaactttt 12910740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 22981074 - 22981179
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  22981074 taagtccaagatgttgcaatcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 22981173  T
Q  118 cttttt 123  Q
    ||||||    
T  22981174 cttttt 22981179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 699431 - 699535
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  || |||||||||||||| |||||||||||||  ||||||||||    
T  699431 taagtccaagatgttgcaagcattactagatgaattactattgattattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaa 699530  T
Q  118 ctttt 122  Q
    |||||    
T  699531 ctttt 699535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 27330580 - 27330692
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||| |||||||||| |||||||||||||  | |||    
T  27330580 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaa 27330679  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  27330680 attaactttttca 27330692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 42342997 - 42343109
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  42342997 acatgtaagtctaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 42343096  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  42343097 attaactttttca 42343109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 8437246 - 8437353
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||| ||| |||||| ||||||||||    
T  8437246 taagtccaagatgttgaaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaatattaaaatcaaaattaa 8437345  T
Q  118 ctttttca 125  Q
    ||||||||    
T  8437346 ctttttca 8437353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 35934177 - 35934284
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||  ||||||||||||||||| | |||||||||||| | ||||||||    
T  35934177 taagtccaagatgttgcaagcattactagttgaattattattgatcattaatcagtaatcaacaatttaaaaatgattcaaacattaaaattaaaattaa 35934276  T
Q  118 ctttttca 125  Q
    ||||||||    
T  35934277 ctttttca 35934284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 43308554 - 43308447
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||  ||||||| | |||| ||||||||||    
T  43308554 taagtcgaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaacgaatcaaatactaaaatcaaaattaa 43308455  T
Q  118 ctttttca 125  Q
    ||||||||    
T  43308454 ctttttca 43308447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 7208763 - 7208653
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||||||||| | |||    
T  7208763 acatgtaagttcaagatgttgcaagtattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaa 7208664  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  7208663 attaacttttt 7208653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 19120141 - 19120247
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaac 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||| ||||||  | |||||||||    
T  19120141 aagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtgatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 19120240  T
Q  119 tttttca 125  Q
    |||||||    
T  19120241 tttttca 19120247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 9200503 - 9200612
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatt 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||  ||||| | ||||||    
T  9200503 tataagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaaatttaaaattaaaatt 9200602  T
Q  116 aactttttca 125  Q
    || |||||||    
T  9200603 aattttttca 9200612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 8741784 - 8741672
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  8741784 acatgtaagtccaaaatgttgcaagcatcactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 8741685  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  8741684 attaactttttca 8741672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 25889655 - 25889755
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||| |||||||||  ||||||||||||||    
T  25889655 tccaagatgttgaaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaacttt 25889754  T
Q  122 t 122  Q
    |    
T  25889755 t 25889755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 22019904 - 22020011
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||| |||||  | ||||||||    
T  22019904 taagtctaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagattaaaattaa 22020003  T
Q  118 ctttttca 125  Q
    ||||||||    
T  22020004 ctttttca 22020011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 28416445 - 28416338
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |   ||||||||||||||||  |||||||||||||  | ||||||||    
T  28416445 taagtccaagatgttgcaagcattacttgatgaattactattgatcattaatcaacaatcaacaatttaaaaaagaatcaaacattaagattaaaattaa 28416346  T
Q  118 ctttttca 125  Q
    ||||||||    
T  28416345 ctttttca 28416338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 5837837 - 5837943
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaac 118  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |   ||||||||||||||||| |||||| ||||||| | |||||||||    
T  5837837 aagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaaaattaaaattaac 5837936  T
Q  119 tttttca 125  Q
     ||||||    
T  5837937 cttttca 5837943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 36860705 - 36860810
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||  ||||||||||||||||| |||||| ||||||  | ||||||||    
T  36860705 taagtccaagatgttgcaagcattactaaatgaattactattaatcatgaattagtaatcaacaatttaaaaatgaatcaagcattaagattaaaattaa 36860804  T
Q  118 cttttt 123  Q
    ||||||    
T  36860805 cttttt 36860810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 32563416 - 32563528
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||| |||||||||| ||||| |||||||||||||| ||  || |||||||||||||| |||||||||||||| | |||    
T  32563416 acatgtaagtctaagatgttgcaagaattactagataaattattattgatcattaatcagcaattaacaatttaaaaatgaatcaaacattaaaattaaa 32563515  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  32563516 attaactttttca 32563528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 14409235 - 14409128
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||  ||||||||||||||||| |||| ||||||||| | ||||||||    
T  14409235 taagtccaagatgttgcaaacattactaaatgaattactattgatcattattcagcaatcaacaatttaaaaatgaatcgaacattaaaattaaaattaa 14409136  T
Q  118 ctttttca 125  Q
     |||||||    
T  14409135 atttttca 14409128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 15724769 - 15724876
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| || ||| ||||||||||||||||||||||||| ||||||||| |   ||||||||||||||||| |||||||||||||| | ||||||||    
T  15724769 taagtccaaaatattgtaagcattactagatgaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaagttaaaattaa 15724868  T
Q  118 ctttttca 125  Q
    ||||||||    
T  15724869 ctttttca 15724876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 40133666 - 40133773
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||  ||||||||||||||||| ||| |||||||||  | ||||||||    
T  40133666 taagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaa 40133765  T
Q  118 ctttttca 125  Q
    ||||||||    
T  40133766 ctttttca 40133773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 43254154 - 43254240
Alignment:
Q  38 agcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttt 122  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  |||||||||||||||    
T  43254154 agcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 43254240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 30969220 - 30969113
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatt 115  Q
    ||||||| ||||||| |||||| |||||||||||| |||||||| ||||||||| ||  ||| ||||||||||||| |||||||||||||| | ||||||    
T  30969220 tataagttcaagatgctgcaagtattactagatgagttactattaatcattaatcagtaatccacaatttaaaaatgaatcaaacattaaaattaaaatt 30969121  T
Q  116 aacttttt 123  Q
    ||||||||    
T  30969120 aacttttt 30969113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 13956254 - 13956151
Alignment:
Q  22 agtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaact 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||  || |   |||||||||||| |||||||||||     
T  13956254 agtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt--aactttttcaaacattaaaatcaaaattaaca 13956157  T
Q  120 ttttca 125  Q
    ||||||    
T  13956156 ttttca 13956151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 36867043 - 36867148
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||| ||| ||  ||||||||||||||||| ||| |||||||||  | ||||||||    
T  36867043 taagtccaagatgttgcaaacattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaa 36867142  T
Q  118 cttttt 123  Q
    ||||||    
T  36867143 cttttt 36867148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 25500820 - 25500713
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||| ||  || |||||||||||||| ||||||| | |||  | ||||||||    
T  25500820 taagtctaagatgttgcaagcattactagatgaaatactgttgatcattaatcagtaattaacaatttaaaaatgaatcaaatactaagattaaaattaa 25500721  T
Q  118 ctttttca 125  Q
    ||||||||    
T  25500720 ctttttca 25500713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 1429056 - 1429005
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaat 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1429056 taagtccaagatgttgcaagcattactagatgaattactattgatcattaat 1429005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 23116116 - 23116017
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||         |||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  23116116 taagtccaagatgttgcaagcattactg--------actattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 23116025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 27318376 - 27318277
Alignment:
Q  27 aagatgttgcaagcattactagatgaattactattgatcattaat--tagatcaacaa-tttaaaaataaatcaaacattaaattcaaaattaacttttt 123  Q
    |||||||||||| |||||||| |||||||||||||||||||||||   | |||||||| ||||||||| |||||||||||||  | ||||||||||||||    
T  27318376 aagatgttgcaaacattactatatgaattactattgatcattaatcaaaaatcaacaattttaaaaatgaatcaaacattaagattaaaattaacttttt 27318277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 26269097 - 26269198
Alignment:
Q  27 aagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttc 124  Q
    ||||||||| ||||| |||||||| |||||||| ||||||||||| ||  ||||||||||||||||| || ||| ||||||  | |||||||||||||||    
T  26269097 aagatgttgtaagcaatactagataaattactactgatcattaatcagtaatcaacaatttaaaaatgaaccaatcattaagattaaaattaactttttc 26269196  T
Q  125 at 126  Q
    ||    
T  26269197 at 26269198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 21088656 - 21088576
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaa 105  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || || || | |||||||||||| |||||||||||||    
T  21088656 tccaagatgttgtaagcattactagatgaattactattaatcatgaa-taaataatcaatttaaaaatgaatcaaacattaa 21088576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 23954669 - 23954589
Alignment:
Q  40 cattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||| ||||||||||||||||||||||||     ||||||||||||||| ||| |||||||||  ||| ||||||||||||||    
T  23954669 cattacttgatgaattactattgatcattaat-----caacaatttaaaaatgaattaaacattaagatcataattaactttttca 23954589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 14919405 - 14919326
Alignment:
Q  47 agatgaattactattgatcattaattaga--tcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||| ||||||||||||| |||  || | ||||||||||| |||||||||||||  |||||||||| |||||||    
T  14919405 agatgaattac-attgatcattaatcagaaatctaaaatttaaaaatgaatcaaacattaagatcaaaattaattttttca 14919326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 6824380 - 6824329
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatca 66  Q
    |||| |||||| |||||||||||||||| |||||||||  ||||||||||||    
T  6824380 acatgtaagtctaagatgttgcaagcatcactagatgagatactattgatca 6824329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 2960025 - 2960132
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  2960025 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 2960124  T
Q  118 ctttttca 125  Q
    ||||||||    
T  2960125 ctttttca 2960132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 11742272 - 11742160
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  11742272 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 11742173  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  11742172 attaactttttca 11742160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 28564687 - 28564575
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||||| |||||    
T  28564687 acatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaa 28564588  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  28564587 attaactttttca 28564575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 10923004 - 10923111
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  10923004 taagtccaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 10923103  T
Q  118 ctttttca 125  Q
    ||||||||    
T  10923104 ctttttca 10923111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 22170988 - 22171095
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  22170988 taagtctaagatgttgcaaacattattagataaattactattgatcattaattagtaatcaacaatttaaaaataaatcaaacattaaaatcaaaattaa 22171087  T
Q  118 ctttttca 125  Q
    ||||||||    
T  22171088 ctttttca 22171095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 37451562 - 37451669
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | ||||||||    
T  37451562 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaa 37451661  T
Q  118 ctttttca 125  Q
    ||||||||    
T  37451662 ctttttca 37451669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 19899673 - 19899563
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaa 111  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||    
T  19899673 acatgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaa 19899574  T
Q  112 aattaactttt 122  Q
    |||||||||||    
T  19899573 aattaactttt 19899563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 23999624 - 23999730
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||||    
T  23999624 taagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 23999723  T
Q  117 acttttt 123  Q
    |||||||    
T  23999724 acttttt 23999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 30254695 - 30254805
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |   ||||||||||||||||| |||||||||||||| |||||    
T  30254695 acatgtaagtccaagatgttgcaagcattactagatgaattactattgattattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaa 30254794  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  30254795 attaacttttt 30254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 8222400 - 8222512
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat-aaatcaaacattaaattcaa 111  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| ||||||||||||||| ||||    
T  8222400 acatgtaagtccaagatgttgcaagcattactagatgaatta-tattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaa 8222498  T
Q  112 aattaactttttca 125  Q
    ||||||||||||||    
T  8222499 aattaactttttca 8222512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 32216332 - 32216437
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  32216332 taagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 32216431  T
Q  118 cttttt 123  Q
    ||||||    
T  32216432 cttttt 32216437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 34012281 - 34012176
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  34012281 taagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 34012182  T
Q  118 cttttt 123  Q
    ||||||    
T  34012181 cttttt 34012176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 14758304 - 14758416
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||| ||||||||  |||||    
T  14758304 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaa 14758403  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  14758404 attaactttttca 14758416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 15383214 - 15383318
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat-aaatcaaacattaaattcaaaattaactt 120  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  15383214 tccaagatgttgcaagcattactagatgaattactattgattattaatcagcaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactt 15383313  T
Q  121 tttca 125  Q
    |||||    
T  15383314 tttca 15383318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 32267314 - 32267418
Alignment:
Q  23 gtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactt 120  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||| |||||||||||||| |||||||||| ||    
T  32267314 gtccaagatgttgcaagcattactagatgaattactattgaacattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattt 32267413  T
Q  121 tttca 125  Q
    |||||    
T  32267414 tttca 32267418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 46931686 - 46931794
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||||    
T  46931686 taagtccaagatgttgcaagcattactagatgaatatattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 46931785  T
Q  117 actttttca 125  Q
    |||||||||    
T  46931786 actttttca 46931794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 9902953 - 9902846
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||| |||||| ||||||||||    
T  9902953 taagtccaagatgctgcaagcactactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaa 9902854  T
Q  118 ctttttca 125  Q
    ||||||||    
T  9902853 ctttttca 9902846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 25160904 - 25161015
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat-aaatcaaacattaaattcaa 111  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||| ||||    
T  25160904 acatgtaagtccaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaa 25161003  T
Q  112 aattaacttttt 123  Q
    ||||||| ||||    
T  25161004 aattaacctttt 25161015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 28769930 - 28770037
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||| | ||||||||    
T  28769930 taagtccaagatgttgcaaacattgctagatgaattactattgatcattaattaataatcaacaatttaaaaatgaatcaaacattaaaattaaaattaa 28770029  T
Q  118 ctttttca 125  Q
    ||||||||    
T  28770030 ctttttca 28770037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 47279466 - 47279573
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  47279466 taagtccaagatgttgcaaacattattagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 47279565  T
Q  118 ctttttca 125  Q
    ||||||||    
T  47279566 ctttttca 47279573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 3309430 - 3309539
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaaca-ttaaattcaaaatta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||| ||| ||| |||||||    
T  3309430 taagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatttagatttaaaatta 3309529  T
Q  117 actttttcat 126  Q
    ||||||||||    
T  3309530 actttttcat 3309539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 16415918 - 16416027
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  |||||    
T  16415918 acatgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaa 16416017  T
Q  113 attaactttt 122  Q
    ||||| ||||    
T  16416018 attaattttt 16416027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 1547543 - 1547655
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  1547543 acatgtaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 1547642  T
Q  113 attaactttttca 125  Q
    ||||| |||||||    
T  1547643 attaattttttca 1547655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 15168368 - 15168480
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||| |||| ||||||||  |||||    
T  15168368 acatgtaagtacaagatgttgcaagcattattagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaa 15168467  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  15168468 attaactttttca 15168480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 27227384 - 27227280
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||| ||| |||||||||  ||||||||||    
T  27227384 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaccatttaaaaatgaattaaacattaatatcaaaattaa 27227285  T
Q  118 ctttt 122  Q
    |||||    
T  27227284 ctttt 27227280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 27532885 - 27532774
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||| |||||||||||||  | |||    
T  27532885 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaa-ttaaaaatgaatcaaacattaagattaaa 27532787  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  27532786 attaactttttca 27532774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 27763210 - 27763102
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||||    
T  27763210 taagttcaagatgttgcaagcattactagataaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 27763111  T
Q  117 actttttca 125  Q
    |||||||||    
T  27763110 actttttca 27763102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 48353819 - 48353926
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  48353819 taagtccaagatattgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 48353918  T
Q  118 ctttttca 125  Q
    ||||||||    
T  48353919 ctttttca 48353926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 21289875 - 21289981
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatt 115  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||    
T  21289875 tataagtccaagatgttgcaaacattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 21289974  T
Q  116 aactttt 122  Q
    || ||||    
T  21289975 aattttt 21289981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 3535200 - 3535305
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||||  | |||| |||    
T  3535200 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcaaacattaagattaaaactaa 3535299  T
Q  118 cttttt 123  Q
    ||||||    
T  3535300 cttttt 3535305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 30326856 - 30326751
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat-aaatcaaacattaaattcaa 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||| |||||||| |||||| ||||    
T  30326856 acatttaagtccaagatgttgcaagcattactagatgaattactattgatcatcaatcagtaatcaacaatttaaaaatgaaatcaaatattaaaatcaa 30326757  T
Q  112 aattaa 117  Q
    ||||||    
T  30326756 aattaa 30326751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 39393665 - 39393766
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||| |||||||||| | ||||||||||||    
T  39393665 tccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaataaaacattaaaattaaaattaacttt 39393764  T
Q  122 tt 123  Q
    ||    
T  39393765 tt 39393766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 51129131 - 51129241
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||  |||||| |  ||    
T  51129131 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagtattaaaat--aa 51129228  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  51129229 attaactttttca 51129241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 42721308 - 42721418
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||  |||||||||| |||||||||||||||||||| ||  ||||| ||||||||||| |||||||||||||| ||| |    
T  42721308 acatgtaagtccaagatgttgcaattattactagattaattactattgatcattaatgagtaatcaataatttaaaaatgaatcaaacattaaaatcata 42721407  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  42721408 attaacttttt 42721418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 4330558 - 4330662
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||| ||||||| |||||||||||||  ||||||||||    
T  4330558 taagtccaatatgttgcaagcattactagatgaattacaattgatcattaatcagtaatcaacaatataaaaatgaatcaaacattaagatcaaaattaa 4330657  T
Q  118 ctttt 122  Q
     ||||    
T  4330658 ttttt 4330662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 10181906 - 10181802
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |   ||||||||||||||||| |||||||||||||  ||| ||||||    
T  10181906 taagtccaaaatgttgcaagcattactagatgaattactattgaacattaatcaacaatcaacaatttaaaaatgaatcaaacattaagatcataattaa 10181807  T
Q  118 ctttt 122  Q
    |||||    
T  10181806 ctttt 10181802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 27563804 - 27563700
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||| ||  ||||||||||||||||  |||||||||||||  ||| ||||||    
T  27563804 taagtccaagatgttgcaagtattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaaagaatcaaacattaagatcataattaa 27563705  T
Q  118 ctttt 122  Q
    |||||    
T  27563704 ctttt 27563700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 238412 - 238305
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  ||| ||||||||||||| |||||||||||||  | ||||| ||    
T  238412 taagtccaagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatccacaatttaaaaatgaatcaaacattaagattaaaatcaa 238313  T
Q  118 ctttttca 125  Q
    ||||||||    
T  238312 ctttttca 238305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 38823491 - 38823596
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| || |||| |||||  | ||||||||    
T  38823491 taagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaacaaatattaagattaaaattaa 38823590  T
Q  118 cttttt 123  Q
    ||||||    
T  38823591 cttttt 38823596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 18422922 - 18423006
Alignment:
Q  14 cacatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacatt 103  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||     ||||||||||||||||| |||||||||||    
T  18422922 cacatgtaagtccaagatgttgcaagcattgctagatgaattactattgatcatta-----atcaacaatttaaaaatgaatcaaacatt 18423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 27267099 - 27266995
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||| |   ||||| ||||||||||| ||| |||||||||  ||||||||||    
T  27267099 taagtctaagatgttgcaagcattactagatgaattactattgataattaatcaataatcaataatttaaaaatgaattaaacattaagatcaaaattaa 27267000  T
Q  118 ctttt 122  Q
    |||||    
T  27266999 ctttt 27266995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 7078962 - 7078855
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||||| ||||||  | ||||||||    
T  7078962 taagtctaagatattgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaaaattaa 7078863  T
Q  118 ctttttca 125  Q
    ||||||||    
T  7078862 ctttttca 7078855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 15752301 - 15752411
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||| |||||||   |||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||| |||||||||  |||||    
T  15752301 acatgtaagtccaagaagttgcaatttttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaa 15752400  T
Q  113 attaacttttt 123  Q
    ||||| |||||    
T  15752401 attaatttttt 15752411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 31962900 - 31963001
Alignment:
Q  27 aagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaa-tttaaaaataaatcaaacattaaattcaaaattaacttttt 123  Q
    |||||||||||||||||| |||||||| |||||||||||||||||  |  |||||||| |||||||||||||||||||||||  | ||||||||||||||    
T  31962900 aagatgttgcaagcattattagatgaactactattgatcattaatcggtaatcaacaattttaaaaataaatcaaacattaagattaaaattaacttttt 31962999  T
Q  124 ca 125  Q
    ||    
T  31963000 ca 31963001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 40885085 - 40885177
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaa 105  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||| |||||| |||| || |||||    
T  40885085 acatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaattagcaatcaataattcaaaaatgaatcgaatattaa 40885177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 1359834 - 1359747
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaa 105  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| |||||||||| ||  ||||||||||||||||| |||||||||||||    
T  1359834 taagttcaaaatgttgcaagcattactggatgaattactatcgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa 1359747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 47682389 - 47682286
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||  || |||||||||||||  ||| |||||||||  | |||||||||||     
T  47682389 tccaagatgttgcaagcattactaaatgaattactattgatcattaatcagtaattaacaatttaaaaaagaattaaacattaagattaaaattaacttg 47682290  T
Q  122 ttca 125  Q
    ||||    
T  47682289 ttca 47682286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 31621453 - 31621340
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaat--tagatcaacaattt-aaaaataaatcaaacattaaattcaa 111  Q
    |||| ||||| ||| ||||||||||||||| |||||||| |||||||||||||||||  |  ||||||||||| |||||| |||| ||||||||  ||||    
T  31621453 acatgtaagttcaatatgttgcaagcattagtagatgaactactattgatcattaatcatcaatcaacaatttaaaaaatgaatcgaacattaagatcaa 31621354  T
Q  112 aattaactttttca 125  Q
    ||||||||||||||    
T  31621353 aattaactttttca 31621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 41926434 - 41926537
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||   |||||  |||||||| | |||||||||||||| ||| ||||||    
T  41926434 taagtccaagatatt-caagcattactagatgaattactattgatcattaattaataatcaatgatttaaaattgaatcaaacattaaaatcataattaa 41926532  T
Q  118 ctttt 122  Q
     ||||    
T  41926533 ttttt 41926537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 37618805 - 37618705
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |   |||||||||||||    || |||||||||||| |||||    
T  37618805 acatgtaagtccaagatgttgcaagcattactagatgaattagtattgaccattaatcaataatcaacaatttaa----aattcaaacattaaaatcaaa 37618710  T
Q  113 attaa 117  Q
    |||||    
T  37618709 attaa 37618705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 48620906 - 48620973
Alignment:
Q  53 attactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    |||||||||||||||||||     ||||||||| ||||| |||||||||||||  | ||||||||||||||||    
T  48620906 attactattgatcattaat-----caacaattttaaaatgaatcaaacattaagattaaaattaactttttca 48620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 33725478 - 33725403
Alignment:
Q  53 attactattgatcattaattag--atcaacaatt-taaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||| ||  ||||||||||  |||||| |||| ||||||||  ||||||| ||||||||||    
T  33725478 attactattgatcattaatcagcaatcaacaattaaaaaaatgaatcgaacattaagatcaaaataaactttttca 33725403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 38759814 - 38759846
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaatta 56  Q
    ||||||||||||||||||||||||||| |||||    
T  38759814 tccaagatgttgcaagcattactagattaatta 38759846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 35025501 - 35025389
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||    
T  35025501 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaaa-tcaaa 35025403  T
Q  113 attaactttttcat 126  Q
    ||||||||||||||    
T  35025402 attaactttttcat 35025389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 34361424 - 34361314
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaat 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||    
T  34361424 tataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaat 34361325  T
Q  115 taactttttca 125  Q
    |||||||||||    
T  34361324 taactttttca 34361314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 25184389 - 25184501
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||| |||||||||||||  |||||    
T  25184389 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaa 25184488  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  25184489 attaactttttca 25184501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 32579722 - 32579834
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||  |||||    
T  32579722 acatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcaaacattaagatcaaa 32579821  T
Q  113 attaactttttca 125  Q
    ||||| |||||||    
T  32579822 attaattttttca 32579834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 6864316 - 6864423
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||||| ||||||||||    
T  6864316 taagttcaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 6864415  T
Q  118 ctttttca 125  Q
    ||||||||    
T  6864416 ctttttca 6864423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 23431836 - 23431943
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||| | ||||||||    
T  23431836 taagtccaagatgttgcaagcattagtagatgaattactattgatcattaattagtaatcaacaatttaaaaatgcatcaaacattaaaattaaaattaa 23431935  T
Q  118 ctttttca 125  Q
    ||||||||    
T  23431936 ctttttca 23431943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 19440583 - 19440473
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||| |||||||||||||  |||||    
T  19440583 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaattaatcaaacattaagatcaaa 19440484  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  19440483 attaacttttt 19440473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 879478 - 879373
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  879478 taagtccaagatgttgcaagcattactagatgaattattattgatcattaataagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 879379  T
Q  118 cttttt 123  Q
    ||||||    
T  879378 cttttt 879373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 3042895 - 3043007
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||| ||||||||||||||||||||||||||| ||||||| |||||| ||  ||||||||||||||||| |||||||||||||| |||||    
T  3042895 acatgtaagtccaacatgttgcaagcattactagatgaattagtattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaa 3042994  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  3042995 attaactttttca 3043007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 27396895 - 27397000
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||  | ||||||||    
T  27396895 tataagtccaaaatgttgcaagcattactagatgaattactattgatcattaatgtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 27396994  T
Q  118 cttttt 123  Q
    ||||||    
T  27396995 cttttt 27397000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 19089383 - 19089280
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| | ||||| ||||||||||    
T  19089383 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 19089284  T
Q  118 cttt 121  Q
    ||||    
T  19089283 cttt 19089280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 33816446 - 33816339
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||| ||||||||  ||||||||||    
T  33816446 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaa 33816347  T
Q  118 ctttttca 125  Q
    ||||||||    
T  33816346 ctttttca 33816339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 37663671 - 37663568
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| | ||||| ||||||||||    
T  37663671 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 37663572  T
Q  118 cttt 121  Q
    ||||    
T  37663571 cttt 37663568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 50697527 - 50697630
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| | |||||||| |||    
T  50697527 tccaagatgttgtaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaatttt 50697626  T
Q  122 ttca 125  Q
    ||||    
T  50697627 ttca 50697630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 46884035 - 46883937
Alignment:
Q  29 gatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  46884035 gatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaataaaaattaattttttca 46883937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 50764996 - 50765106
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  50764996 acatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 50765095  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  50765096 attaacttttt 50765106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 23761350 - 23761459
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatt 115  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||| ||||||||||| |||||||||||||  | ||||||    
T  23761350 tataagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaataatttaaaaatgaatcaaacattaagattaaaatt 23761449  T
Q  116 aactttttca 125  Q
    ||||||||||    
T  23761450 aactttttca 23761459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 29584135 - 29584023
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||| |||||||||| |||||||||||||  | |||    
T  29584135 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaa 29584036  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  29584035 attaactttttca 29584023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 30002576 - 30002464
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||| |||||||||||||  | |||    
T  30002576 acatttaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaataaacaatttaaaaatgaatcaaacattaagattaaa 30002477  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  30002476 attaactttttca 30002464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 32912510 - 32912402
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||| |    
T  32912510 taagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatga 32912411  T
Q  117 actttttca 125  Q
    | |||||||    
T  32912410 attttttca 32912402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 7703790 - 7703897
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  7703790 taagtcgaagatgttgcaagcattactagatgaattactatttatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 7703889  T
Q  118 ctttttca 125  Q
    ||||||||    
T  7703890 ctttttca 7703897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 39400289 - 39400396
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  39400289 taagttcaagatgttgcaagcattactagatgaatgactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 39400388  T
Q  118 ctttttca 125  Q
    ||||||||    
T  39400389 ctttttca 39400396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 46888084 - 46887981
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |   ||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  46888084 tccaagatgttacaagcattactagatgaattactattgatcattaatcactaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaacttt 46887985  T
Q  122 ttca 125  Q
    ||||    
T  46887984 ttca 46887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 33341674 - 33341784
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  33341674 acatgtaagtccaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 33341773  T
Q  113 attaacttttt 123  Q
    ||||| |||||    
T  33341774 attaatttttt 33341784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 37775934 - 37776044
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  |  ||    
T  37775934 acatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattgaa 37776033  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  37776034 attaacttttt 37776044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 47254022 - 47254128
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaac 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| ||||||  | |||||||||    
T  47254022 aagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 47254121  T
Q  119 tttttca 125  Q
    |||||||    
T  47254122 tttttca 47254128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 55477826 - 55477716
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  || |||||||||||||| |||||||||||||  |||||    
T  55477826 acatttaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaa 55477727  T
Q  113 attaacttttt 123  Q
    ||||| |||||    
T  55477726 attaatttttt 55477716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 1815586 - 1815687
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||||||    
T  1815586 tccaagatgttgcaaacattactagatgaattacaattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 1815685  T
Q  122 tt 123  Q
    ||    
T  1815686 tt 1815687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 37288004 - 37288117
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaa-attcaa 111  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||  ||||| ||||||||||| ||||||||||||| ||| ||    
T  37288004 acatgtaagtccaagatgttgcaagcattattagatgaattactattgagcattaatcagtaatcaataatttaaaaatgaatcaaacattaagatttaa 37288103  T
Q  112 aattaactttttca 125  Q
    ||||||||||||||    
T  37288104 aattaactttttca 37288117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 17272240 - 17272352
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |  || ||| |||||||||| |||||||||||||  | |||    
T  17272240 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatgaacgatttaaaaatgaatcaaacattaagattaaa 17272339  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  17272340 attaactttttca 17272352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 28002921 - 28002809
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||| ||||||||  |||||    
T  28002921 acatgtaagtccaagatgttgctaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaa 28002822  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  28002821 attaactttttca 28002809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 34948030 - 34947923
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  34948030 acatgtaagtccaagatgttgcaagcattactagatgaaatactattgatcgttaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 34947931  T
Q  113 attaactt 120  Q
    ||||||||    
T  34947930 attaactt 34947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 4205260 - 4205372
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||  ||||| ||||||||||| |||||||||||||| | |||    
T  4205260 acatgtaagtccaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaa 4205359  T
Q  113 attaactttttca 125  Q
    | |||||||||||    
T  4205360 agtaactttttca 4205372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 17167989 - 17168101
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||  ||||| ||||||||||| |||||||||||||| | |||    
T  17167989 acatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcattaattagtaatcaataatttaaaaatgaatcaaacattaaaattaaa 17168088  T
Q  113 attaactttttca 125  Q
    | ||| |||||||    
T  17168089 agtaattttttca 17168101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 49376243 - 49376355
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||  ||||| ||||||||||| ||| |||||||||  |||||    
T  49376243 acatgtaagtccaagaagttgaaagcattactaaatgaattactattgatcattaatcagtaatcaagaatttaaaaatgaattaaacattaagatcaaa 49376342  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  49376343 attaactttttca 49376355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 7152134 - 7152027
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||||  | |||| |||    
T  7152134 taagtccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatgaaaaataa 7152035  T
Q  118 ctttttca 125  Q
    ||||||||    
T  7152034 ctttttca 7152027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 4598258 - 4598368
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  4598258 acatttaaatccaagatgttgcaagcattattagattaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaa 4598357  T
Q  113 attaacttttt 123  Q
    |||||| ||||    
T  4598358 attaacatttt 4598368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 26896378 - 26896474
Alignment:
Q  30 atgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttttt 123  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  26896378 atgttgcaaacattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcgaacattaaaatcaaaattaacttttt 26896474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 55241040 - 55240928
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||||| |   ||||||||||||||||| |||||||||||||  | |||    
T  55241040 acatgtaagtccaagatgttgcaaacattactagataaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaa 55240941  T
Q  113 attaactttttca 125  Q
    ||||| |||||||    
T  55240940 attaaatttttca 55240928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 9139505 - 9139612
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaac-aatttaaaaataaatcaaacattaaattcaaaa 113  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| | || | | ||||||||||| |||||||||||||  ||| ||    
T  9139505 acatgtaagtccaagatgttgcaagcattactagacgaattactattgatcattaatca-ataatctaatttaaaaatgaatcaaacattaagatcataa 9139603  T
Q  114 ttaactttt 122  Q
    |||||||||    
T  9139604 ttaactttt 9139612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 32592365 - 32592472
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||| ||||| |   ||||||||||||||||| |||||||||||||  | ||||||||    
T  32592365 taagttcaagatgttgaaagcattactaaatgaattactattgatcgttaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 32592464  T
Q  118 ctttttca 125  Q
    ||||||||    
T  32592465 ctttttca 32592472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 36493619 - 36493512
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||||||||  |  || |||||||||||||| |||||||||||||  ||| ||||||    
T  36493619 taagtctaagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaa 36493520  T
Q  118 ctttttca 125  Q
    ||||||||    
T  36493519 ctttttca 36493512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 38012568 - 38012650
Alignment:
Q  45 ctagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  38012568 ctagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttca 38012650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 17173566 - 17173678
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||| ||||| ||| ||  ||||| ||||||||||| |||||||||||||| | |||    
T  17173566 acatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaa 17173665  T
Q  113 attaactttttca 125  Q
    | ||| |||||||    
T  17173666 agtaattttttca 17173678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 35020965 - 35020856
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactat----tgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaa 113  Q
    |||||||||||| |||||| |||||||||||||||||||||    |||||||||||  |  ||||||||||||||||| |||||||||||||  ||||||    
T  35020965 taagtccaagatattgcaaacattactagatgaattactatatattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacattaagatcaaaa 35020866  T
Q  114 ttaacttttt 123  Q
    ||||||||||    
T  35020865 ttaacttttt 35020856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 42200011 - 42200118
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||||||| ||  ||||| ||||||||||| |||||||||| ||| || ||||||    
T  42200011 taagtccaagatgttgcaagcattactagatgaatatactactgttcattaatcagtaatcaataatttaaaaattaatcaaacatcaaaatc-aaatta 42200109  T
Q  117 actttttca 125  Q
    |||||||||    
T  42200110 actttttca 42200118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 5047901 - 5047789
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||  ||||||||| ||||| ||||||||| |||| |   || |||||||||||||| |||| ||||||||| |||||    
T  5047901 acatgtaagtccaagatgttgcaagttttactagataaattattattgatcagtaatcaacaataaacaatttaaaaatgaatcgaacattaaaatcaaa 5047802  T
Q  113 attaactttttca 125  Q
    ||||| |||||||    
T  5047801 attaattttttca 5047789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 25700979 - 25700879
Alignment:
Q  27 aagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttc 124  Q
    ||||| |||||||||||  |||||||||||||||||||||||||| |   ||  ||||||||||||| |||||||||||||  |||||||||||||||||    
T  25700979 aagattttgcaagcattgttagatgaattactattgatcattaatcaataatgtacaatttaaaaatgaatcaaacattaagatcaaaattaactttttc 25700880  T
Q  125 a 125  Q
    |    
T  25700879 a 25700879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 4934133 - 4934035
Alignment:
Q  30 atgttgcaagcattactagatgaattactattgatcattaattag--atcaacaattt-aaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    |||||||| |||||| |||||||||| ||||| ||||||||| ||  ||||| ||||| |||||||||| |||||||||  ||||||||||||| ||||    
T  4934133 atgttgcacgcattaatagatgaatttctattaatcattaatcagtaatcaaaaattttaaaaataaattaaacattaagatcaaaattaacttgttca 4934035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 46297666 - 46297561
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  46297666 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 46297567  T
Q  118 cttttt 123  Q
    ||||||    
T  46297566 cttttt 46297561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 22622627 - 22622515
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||| |||||||||||||| |||||    
T  22622627 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaactatttaaaaatgaatcaaacattaaaatcaaa 22622528  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  22622527 attaactttttca 22622515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 4015726 - 4015838
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  4015726 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 4015825  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  4015826 attaactttttca 4015838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 11357285 - 11357181
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  11357285 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 11357186  T
Q  118 ctttt 122  Q
    |||||    
T  11357185 ctttt 11357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 26941169 - 26941057
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| | ||||| |||||    
T  26941169 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagcgttaaaatcaaa 26941070  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  26941069 attaactttttca 26941057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 54506077 - 54506187
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaat 114  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||    
T  54506077 tataagtccaaaatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaat 54506176  T
Q  115 taactttttca 125  Q
    |||||||||||    
T  54506177 taactttttca 54506187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 37157975 - 37158087
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||    
T  37157975 acatgtaagtccaatatgtcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaa 37158074  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  37158075 attaactttttca 37158087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 40552168 - 40552056
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||| |||||||||||||  |||||    
T  40552168 acatgtaagtccatgatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaa 40552069  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  40552068 attaactttttca 40552056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 47481794 - 47481902
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||||    
T  47481794 taagttcaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 47481893  T
Q  117 actttttca 125  Q
    |||||||||    
T  47481894 actttttca 47481902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 29099618 - 29099725
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  29099618 taagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaatattaaaattaa 29099717  T
Q  118 ctttttca 125  Q
    ||||||||    
T  29099718 ctttttca 29099725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 39282928 - 39283031
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  39282928 tccaaaatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttt 39283027  T
Q  122 ttca 125  Q
    ||||    
T  39283028 ttca 39283031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 42505979 - 42505876
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| | ||||| ||||||||||    
T  42505979 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 42505880  T
Q  118 cttt 121  Q
    ||||    
T  42505879 cttt 42505876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 3655112 - 3654996
Alignment:
Q  14 cacatataagtccaagatgttgcaagcattactag--atgaattactattgatcattaattag--atcaacaatttaaaaat-aaatcaaacattaaatt 108  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||| ||  ||||||||||||||||| ||||||||||||||| |    
T  3655112 cacatataagtccaagatgttgcaagcattactagatatgaattactattgattattaatcagtaatcaacaatttaaaaataaaatcaaacattaaaat 3655013  T
Q  109 caaaattaactttttca 125  Q
    |||||||||| ||||||    
T  3655012 caaaattaacattttca 3654996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 36012410 - 36012519
Alignment:
Q  19 ataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacatt-aaattcaaaatt 115  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||| ||| ||    
T  36012410 ataagtccaaaatgctgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaattaaaattt 36012509  T
Q  116 aactttttca 125  Q
    ||||||||||    
T  36012510 aactttttca 36012519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 22451235 - 22451347
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||| ||||||||||| |||| ||||||||  |||||    
T  22451235 acatgtaagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagcaatcaaaaatttaaaaatgaatcgaacattaagatcaaa 22451334  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  22451335 attaactttttca 22451347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 14586584 - 14586477
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||  | ||||||||    
T  14586584 taagtccaagatgttgcaagcattactagataaattactactgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaa 14586485  T
Q  118 ctttttca 125  Q
     |||||||    
T  14586484 ttttttca 14586477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 37203340 - 37203447
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| || | ||||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  37203340 taagtccaatatatcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 37203439  T
Q  118 ctttttca 125  Q
    ||||||||    
T  37203440 ctttttca 37203447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 48355213 - 48355320
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||| ||  | ||||||||||||||| |||||||||||||  ||||||||||    
T  48355213 taagtccaagatgttgcaagtattactagatgaattattattgatcattaatcagtaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 48355312  T
Q  118 ctttttca 125  Q
    ||||||||    
T  48355313 ctttttca 48355320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 21009706 - 21009600
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||||    
T  21009706 taagtctaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 21009607  T
Q  117 acttttt 123  Q
    | |||||    
T  21009606 atttttt 21009600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 1089969 - 1090070
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||||  ||||||||||||||    
T  1089969 tccaagattttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 1090068  T
Q  122 tt 123  Q
    ||    
T  1090069 tt 1090070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 52040831 - 52040722
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||| ||  ||||||||||||||||| |||||||||||||  |||||    
T  52040831 acatgtaagtccaagatgttgcaaacattactagatgaatgattattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaagatcaaa 52040732  T
Q  113 attaactttt 122  Q
    ||||||||||    
T  52040731 attaactttt 52040722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 53229061 - 53228952
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |   ||||||||||||||||| |||||||||||||  |||||    
T  53229061 acatgtaagttcaagatgttgcaagcattactagatgaattagtattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaa 53228962  T
Q  113 attaactttt 122  Q
    ||||||||||    
T  53228961 attaactttt 53228952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 24708024 - 24707912
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||| ||||||||||||| ||||| |||||||||| ||||||||| ||  ||||||||||||||||| |||||||||||||| | |||    
T  24708024 acatgtaagtccaagaagttgcaagcattattagataaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaa 24707925  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  24707924 attaactttttca 24707912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 3362528 - 3362631
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaac 118  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||| |||||||    
T  3362528 aagtccaatatgttgcaagcattactggatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcataattaac 3362627  T
Q  119 tttt 122  Q
    ||||    
T  3362628 tttt 3362631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 4761554 - 4761447
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatt 115  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||| ||  ||||||||||| ||||| |||||||||||||| ||||||||    
T  4761554 tataagtccaaaatgttgcaaacattaccagatgaattactattaatcattaatcagaaatcaacaatttgaaaatgaatcaaacattaaaatcaaaatt 4761455  T
Q  116 aacttttt 123  Q
    ||||||||    
T  4761454 aacttttt 4761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 29164081 - 29164179
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaact 119  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||  | ||||||||||    
T  29164081 taagtctaagatgttacaagcattactagatgaattactattgatcatta-----atcaacaatttaaaaataaatcaaacattaagattaaaattaact 29164175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 44186421 - 44186315
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  44186421 taagtctaagatgttgcaagcattactagataaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 44186322  T
Q  118 ctttttc 124  Q
    | |||||    
T  44186321 cattttc 44186315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 44891770 - 44891874
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaac 118  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||| |||||| ||||||  | |||||||||    
T  44891770 aagtctaagatgttgcaagcattactagatgaattactgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 44891869  T
Q  119 ttttt 123  Q
    |||||    
T  44891870 ttttt 44891874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 21193879 - 21193986
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||| |||||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  21193879 taagttcaagatgttgcaaccattactaaatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 21193978  T
Q  118 ctttttca 125  Q
    ||||||||    
T  21193979 ctttttca 21193986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 43975796 - 43975689
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||| ||||||||  |||| |||||    
T  43975796 taagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaagattaa 43975697  T
Q  118 ctttttca 125  Q
     |||||||    
T  43975696 ttttttca 43975689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 40936246 - 40936352
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaac 118  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||  |  |||||||||||||||||||||||| ||||||  |  ||||||||    
T  40936246 aagtctaagatgttgcaagcattactagataaattactattgatcattaatcggtaatcaacaatttaaaaataaatcaatcattaagattgaaattaac 40936345  T
Q  119 tttttca 125  Q
    |||||||    
T  40936346 tttttca 40936352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 7327386 - 7327281
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||| ||||||  |||||  | ||||||||    
T  7327386 taagtctaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaa 7327287  T
Q  118 cttttt 123  Q
    ||||||    
T  7327286 cttttt 7327281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 51212675 - 51212602
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatt--agatcaacaatttaaaaat 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  51212675 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattaaaaatcaacaatttaaaaat 51212602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 20373140 - 20373060
Alignment:
Q  47 agatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  20373140 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttca 20373060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 22445969 - 22445865
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||| ||  |||||||||||||| || |||||||||||||  ||| ||||||    
T  22445969 taagtccaaaatgttgcaagtattactggatgaattactattgatcattaatcagtaatcaacaatttaaatatgaatcaaacattaagatcataattaa 22445870  T
Q  118 ctttt 122  Q
    |||||    
T  22445869 ctttt 22445865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 33378694 - 33378582
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |   |||||| |||||||||| |||||||||||||  | |||    
T  33378694 acatgtaagttcaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacgatttaaaaatgaatcaaacattaagattaaa 33378595  T
Q  113 attaactttttca 125  Q
    ||||| |||||||    
T  33378594 attaattttttca 33378582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 33698425 - 33698532
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||  ||||||  | ||||||||    
T  33698425 taagtctaagatattgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatcagtcattaagattaaaattaa 33698524  T
Q  118 ctttttca 125  Q
    ||||||||    
T  33698525 ctttttca 33698532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 2008204 - 2008318
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag---------atcaacaatttaaaaataaatcaaacattaaattca 110  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||| ||         ||||||||||||||||| |||||||||||||  | |    
T  2008204 taagtccaagatgttgcaagcattactagatgaaataatattgatcattaatcagtaatcattaatcaacaatttaaaaatgaatcaaacattaagatta 2008303  T
Q  111 aaattaactttttca 125  Q
    |||||||||||||||    
T  2008304 aaattaactttttca 2008318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 46994565 - 46994492
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  46994565 taagtccaagatattgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaat 46994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 50475083 - 50475197
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta---------gatcaacaatttaaaaataaatcaaacattaaattca 110  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |          ||||| ||||||||||| |||||||||||||| |||    
T  50475083 taagtccaagatgttgcaagcattactagatgaattagtattgatcattaatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatca 50475182  T
Q  111 aaattaactttttca 125  Q
    ||||||| |||||||    
T  50475183 aaattaaatttttca 50475197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 24488866 - 24488761
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||| |   ||||| ||||||||||| |||||||||||||  | ||||||||    
T  24488866 taagttcaagatgttgcaagcattactagatgcattactattaatcatgaatcaataatcaataatttaaaaatgaatcaaacattaatattaaaattaa 24488767  T
Q  118 cttttt 123  Q
    ||||||    
T  24488766 cttttt 24488761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 25580009 - 25580116
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatt 115  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||| || ||| ||||||  | || |||    
T  25580009 tataaatctaagatattgcaagcattactagatgaattactattgatcattaatccgcaatcaacaatttaaaaatgaaccaatcattaagattaagatt 25580108  T
Q  116 aacttttt 123  Q
    ||||||||    
T  25580109 aacttttt 25580116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 32373742 - 32373813
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaa 89  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||    
T  32373742 taagtctaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaa 32373813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 54828610 - 54828554
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaat 71  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  54828610 acatgtaagtccaagatgttgcaagcattactagataaattactattgatcattaat 54828554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 11357054 - 11356955
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||        ||||||||| ||||||||||||  ||||||||||||||||| |||| ||||||||  ||||||||||    
T  11357054 taagtccaagatgttgcaagcatta--------attactattcatcattaattagtaatcaacaatttaaaaatgaatccaacattaagatcaaaattaa 11356963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 34133207 - 34133288
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| |||  |  ||||||||||||||||| |||||||    
T  34133207 taagtccaagatgttgcaagcattactagatgaattactagtaatcatgaatcggtaatcaacaatttaaaaatgaatcaaa 34133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 45174778 - 45174821
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattga 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  45174778 taagtccaagatgttgcaagcattactagatgaattactattga 45174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 38591974 - 38592051
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaa 99  Q
    ||||||||||||||||||||| || |  |||||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  38591974 tccaagatgttgcaagcattattaaacaaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaa 38592051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 35844577 - 35844626
Alignment:
Q  76 tcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  35844577 tcaacaatttaaaaataaatcaaacattaaaattaaaattaactttttca 35844626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 27480242 - 27480175
Alignment:
Q  40 cattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaa 105  Q
    ||||||||||||||||||||||||| |||||| |  |||||||||||||||||| |||| ||||||||    
T  27480242 cattactagatgaattactattgattattaatcagcgatcaacaatttaaaaatgaatcgaacattaa 27480175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 11467115 - 11467189
Alignment:
Q  46 tagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||||||||     ||||||||||||||||| |||||| ||||||    ||||||||||||||||    
T  11467115 tagatgaattactattgatcatta-----atcaacaatttaaaaatgaatcaatcattaagaataaaattaactttttca 11467189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 11835537 - 11835494
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattga 63  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  11835537 taagtccaagatgttgcaaacattactaaatgaattactattga 11835494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 53811638 - 53811597
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactatt 61  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  53811638 taagtccaagatgttgcaggcattcctagatgaattactatt 53811597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 26357858 - 26357963
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  26357858 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 26357957  T
Q  118 cttttt 123  Q
    ||||||    
T  26357958 cttttt 26357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 35959176 - 35959280
Alignment:
Q  23 gtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||||||||    
T  35959176 gtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactt 35959275  T
Q  121 tttca 125  Q
    |||||    
T  35959276 tttca 35959280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 41961121 - 41961228
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||||| ||||||||||    
T  41961121 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 41961220  T
Q  118 ctttttca 125  Q
    ||||||||    
T  41961221 ctttttca 41961228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 43648167 - 43648060
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  43648167 taagtccaagatgtcgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 43648068  T
Q  118 ctttttca 125  Q
    ||||||||    
T  43648067 ctttttca 43648060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 2325296 - 2325195
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||  ||||||||||||||    
T  2325296 tccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttt 2325197  T
Q  122 tt 123  Q
    ||    
T  2325196 tt 2325195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 11366303 - 11366195
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | |||||||    
T  11366303 taagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaatta 11366204  T
Q  117 actttttca 125  Q
    |||||||||    
T  11366203 actttttca 11366195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 33660291 - 33660192
Alignment:
Q  28 agatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  33660291 agatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttca 33660192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 33709150 - 33709047
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaat--tagatcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||| |||||||||||||| | ||||||||||||    
T  33709150 tccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttt 33709051  T
Q  122 ttca 125  Q
    ||||    
T  33709050 ttca 33709047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 43770770 - 43770663
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  43770770 taagttcaagatgttgcaagcattactagatgaatttctattgatcattaattagaaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 43770671  T
Q  118 ctttttca 125  Q
    ||||||||    
T  43770670 ctttttca 43770663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 4763912 - 4764017
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||| ||  ||||| ||||||||||| |||||||||||||| ||||||||||    
T  4763912 taagtccaagatattgcaagcattactagttgaattactattgatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaa 4764011  T
Q  118 cttttt 123  Q
    ||||||    
T  4764012 cttttt 4764017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 5881805 - 5881918
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||| |||||||||||||  | |||    
T  5881805 acatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattattcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 5881904  T
Q  113 attaactttttcat 126  Q
    ||||||||||||||    
T  5881905 attaactttttcat 5881918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 18494208 - 18494096
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  18494208 acatgtaagtccaagatgttgtaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 18494109  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  18494108 attaactttttca 18494096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 7006860 - 7006753
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||| ||||||||||||   | ||||||||    
T  7006860 taagtccaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattatgattaaaattaa 7006761  T
Q  118 ctttttca 125  Q
    ||||||||    
T  7006760 ctttttca 7006753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 19289245 - 19289138
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||| ||| |||||||||  ||||||||||    
T  19289245 taagtccaagatattgcaagcattactagatgaattactattgatcattaatcagaaattaacaatttaaaaatgaattaaacattaagatcaaaattaa 19289146  T
Q  118 ctttttca 125  Q
    ||||||||    
T  19289145 ctttttca 19289138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 19424563 - 19424457
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaac 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| ||||||  | |||||||||    
T  19424563 aagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 19424464  T
Q  119 tttttca 125  Q
    |||||||    
T  19424463 tttttca 19424457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 37905985 - 37906099
Alignment:
Q  14 cacatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat-aaatcaaacattaaattca 110  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||  || |||||||||||||| ||||||||||||||| |||    
T  37905985 cacatgtaagtccaagatgttgcaagaattactggatgaattactattgatcattaatcagtaattaacaatttaaaaatgaaatcaaacattaaaatca 37906084  T
Q  111 aaattaactttttca 125  Q
    ||||||| |||||||    
T  37906085 aaattaattttttca 37906099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 41465777 - 41465889
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||  ||||||||||||||| | |||| ||||||||  |||||    
T  41465777 acatgtaagtccaagatgttgcaaacattactatatgaattactattgatcattaatcagcaatcaacaatttaaaattgaatcgaacattaagatcaaa 41465876  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  41465877 attaactttttca 41465889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 3177215 - 3177327
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||| || |||||||||||||||||||||||||| ||||| ||| ||  ||||||||||| |||||||||||||||||||| | |||    
T  3177215 acatgtaagtccaagatattacaagcattactagatgaattactatttatcatgaataagtaatcaacaatttgaaaataaatcaaacattaaaattaaa 3177314  T
Q  113 attaactttttca 125  Q
    | |||||||||||    
T  3177315 agtaactttttca 3177327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 19500831 - 19500739
Alignment:
Q  26 caagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||| |||||  |||||||||    
T  19500831 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaatta 19500739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 4167203 - 4167310
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||  ||||||||||||||||| ||| |||||||||  | ||||||||    
T  4167203 taagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaa 4167302  T
Q  118 ctttttca 125  Q
    ||||||||    
T  4167303 ctttttca 4167310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 27349870 - 27349789
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaa 99  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  27349870 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaa 27349789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 31862133 - 31862240
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| ||| |  |||||||||||||||||||||||||||||||| ||  |||||| |||||||||| ||||||| |||||  ||||||||||    
T  31862133 taagtccaagatattgtagacattactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaa 31862232  T
Q  118 ctttttca 125  Q
    ||||||||    
T  31862233 ctttttca 31862240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 31570649 - 31570551
Alignment:
Q  27 aagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttttt 123  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||  |||||||||| |||||| ||||||| | ||||||||||||||    
T  31570649 aagatgttgcaagcattgctagatgaattactattgatcattaatcagtaatcaaatatttaaaaatgaatcaatcattaaaatgaaaattaacttttt 31570551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 44913940 - 44914055
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactaga---tgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattc 109  Q
    |||| ||||||||||||||||||||||||| ||||   |||||||||||| ||||| ||| ||  ||||||||||||||||| |||||||||||||  |     
T  44913940 acatgtaagtccaagatgttgcaagcattattagaaaatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagatt 44914039  T
Q  110 aaaattaactttttca 125  Q
    ||||||||||||||||    
T  44914040 aaaattaactttttca 44914055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 33550908 - 33550800
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaattag------atcaacaatttaaaaataaatcaaacattaaattcaaaat 114  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||       ||||||||||||||||| |||||||||||||  |||||||    
T  33550908 aagtccaatatgttgcaagcattactagatgaataactattgattatttattaaccagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaat 33550809  T
Q  115 taacttttt 123  Q
    |||||||||    
T  33550808 taacttttt 33550800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 4478646 - 4478717
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaa 89  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||    
T  4478646 taagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaa 4478717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 13711740 - 13711847
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||||||| ||  |||||| |||||||||| |||||| |||| || | ||||||||    
T  13711740 taagtctaagatgttgcaaacaatactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaatcatttaaattaaaattaa 13711839  T
Q  118 ctttttca 125  Q
     |||||||    
T  13711840 ttttttca 13711847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 19314126 - 19314179
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaat 71  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19314126 tataagtctaagatgttgcaagcattactagatgaattactattgatcattaat 19314179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 39167296 - 39167184
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||| || || ||| ||  ||||||||||||||||| ||| |||||||||  | |||    
T  39167296 acatgtaagtccaaattgttgctagcattactagatgaattactattaattatgaatcagtaatcaacaatttaaaaatgaataaaacattaagattaaa 39167197  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  39167196 attaactttttca 39167184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 29242046 - 29241963
Alignment:
Q  41 attactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttt 122  Q
    ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  29242046 attactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaactttt 29241963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 33902317 - 33902400
Alignment:
Q  42 ttactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttttt 123  Q
    ||||||||||||||| ||||||| ||||||  |  |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  33902317 ttactagatgaattattattgattattaatctgtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttt 33902400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 41051222 - 41051115
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| |||||||||| ||||||| |||||||||||  |||||||||||||| |   |||||||||| |||||| |||||||||||||| | ||||||||    
T  41051222 taagttcaagatgttgtaagcattgctagatgaattgttattgatcattaatcaataatcaacaattcaaaaatgaatcaaacattaaaattaaaattaa 41051123  T
Q  118 ctttttca 125  Q
     |||||||    
T  41051122 ttttttca 41051115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 4264003 - 4263926
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaa 90  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||||||||| || ||  ||||||||||||||||    
T  4264003 acatataagttcaagatgttgcaagcattactagatgaaataatattgatcattgatcagtaatcaacaatttaaaaa 4263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 18257453 - 18257353
Alignment:
Q  27 aagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttc 124  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||  ||| ||||||| ||||| ||| ||  |||||  | |||||||||||||||    
T  18257453 aagatgttgcaagcattactagatgaattattatttatcattaatcagtaatcgacaattttaaaatgaataaattattaatattaaaattaactttttc 18257354  T
Q  125 a 125  Q
    |    
T  18257353 a 18257353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 45328026 - 45328078
Alignment:
Q  73 agatcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  45328026 agatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttca 45328078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 44286230 - 44286281
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaat 71  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  44286230 taagtctaagatgttgcaagcattgttagatgaattactattgatcattaat 44286281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 41463512 - 41463407
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||| || ||||| ||||| |||||||||||||||||||| |   || || ||||||||||| |||||| ||||||  | ||||||||    
T  41463512 taagtctaagatgttgtaaacattaatagataaattactattgatcattaatcaataattaataatttaaaaatgaatcaatcattaagattaaaattaa 41463413  T
Q  118 cttttt 123  Q
    ||||||    
T  41463412 cttttt 41463407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 16446785 - 16446678
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||| ||||||||| ||||||||||    
T  16446785 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatctaacattaaaatcaaaattaa 16446686  T
Q  118 ctttttca 125  Q
    ||||||||    
T  16446685 ctttttca 16446678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 23854341 - 23854234
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  23854341 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 23854242  T
Q  118 ctttttca 125  Q
    ||||||||    
T  23854241 ctttttca 23854234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 38644253 - 38644365
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||  | |||    
T  38644253 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaaaatttaaaaataaatcaaacattaagattaaa 38644352  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  38644353 attaactttttca 38644365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 43643510 - 43643398
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||| |||||||||||||  |||||    
T  43643510 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaa 43643411  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  43643410 attaactttttca 43643398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 1149542 - 1149435
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||| |||||||||||||| ||||||||||    
T  1149542 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 1149443  T
Q  118 ctttttca 125  Q
     |||||||    
T  1149442 ttttttca 1149435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 37970429 - 37970322
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  37970429 taagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 37970330  T
Q  118 ctttttca 125  Q
    ||||||||    
T  37970329 ctttttca 37970322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 16223138 - 16223248
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||    
T  16223138 acatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaa 16223237  T
Q  113 attaacttttt 123  Q
    ||||| |||||    
T  16223238 attaatttttt 16223248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 24823309 - 24823199
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||||||||||  | |||    
T  24823309 acatgtaagtccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaa 24823210  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  24823209 attaacttttt 24823199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 34895237 - 34895347
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||    
T  34895237 acatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaa 34895336  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  34895337 attaacttttt 34895347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 44869776 - 44869884
Alignment:
Q  19 ataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||| |||||||||||||| | |||||||    
T  44869776 ataagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaaccaacaatttaaaaatgaatcaaacattaaaattaaaatta 44869875  T
Q  117 actttttca 125  Q
    |||||||||    
T  44869876 actttttca 44869884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 6098423 - 6098336
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  6098423 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaa 6098336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 35459621 - 35459514
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  35459621 taagtccaaaatgttgcaaacattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 35459522  T
Q  118 ctttttca 125  Q
    ||||||||    
T  35459521 ctttttca 35459514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 35859222 - 35859321
Alignment:
Q  28 agatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  35859222 agatgttgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttca 35859321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 8803732 - 8803619
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaa 111  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||  || |||||||||||||| |||||||||||||| ||||    
T  8803732 acatgtaagtccaagatgttgcaagcattaccagatgaatatactattgatcattaatcagtaatgaacaatttaaaaatgaatcaaacattaaaatcaa 8803633  T
Q  112 aattaactttttca 125  Q
    ||||||||||||||    
T  8803632 aattaactttttca 8803619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 4132596 - 4132492
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| ||| | |||||||  ||||||||||    
T  4132596 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatttgtaatcaacaatttaaaaatgaattacacattaagatcaaaattaa 4132497  T
Q  118 ctttt 122  Q
    |||||    
T  4132496 ctttt 4132492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 5299861 - 5299749
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||| ||| |||||||||  | |||    
T  5299861 acatgtaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaa 5299762  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  5299761 attaactttttca 5299749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 7890872 - 7890760
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| || |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||| |||||  |||||    
T  7890872 acatgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaa 7890773  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  7890772 attaactttttca 7890760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 466112 - 466219
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  466112 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 466211  T
Q  118 ctttttca 125  Q
    ||| ||||    
T  466212 cttattca 466219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 27082753 - 27082641
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| |   ||||||||||||||||| ||| |||||||||  |||||    
T  27082753 acatgtaagtccaagatgttgcaagcattactagatgaattactacttatcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaa 27082654  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  27082653 attaactttttca 27082641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 12587862 - 12587969
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||| |||||||||||||  ||||||||||    
T  12587862 taagtcaaagattttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaa 12587961  T
Q  118 ctttttca 125  Q
     |||||||    
T  12587962 ttttttca 12587969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 11727304 - 11727409
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||  |||||  | ||||||||    
T  11727304 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaa 11727403  T
Q  118 cttttt 123  Q
    ||||||    
T  11727404 cttttt 11727409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 39099029 - 39098924
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||||  ||||||||||||| | ||||||||    
T  39099029 taagtccaaaatgttgcaagcattactagatgaattactattgatcattaattaataatcaataatttaaaaatgcatcaaacattaaaattaaaattaa 39098930  T
Q  118 cttttt 123  Q
     |||||    
T  39098929 tttttt 39098924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 34951972 - 34951860
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| |||||||||||||  |||||| ||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  34951972 acatgtaagtctaagatgttgcaagtcttactacatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 34951873  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  34951872 attaactttttca 34951860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 36694881 - 36694769
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||||| ||||| ||| ||  ||||| |||||||||||||||||||||||||| | |||    
T  36694881 acatgtaaatccaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaataaatcaaacattaaaattaaa 36694782  T
Q  113 attaactttttca 125  Q
    | |||||||||||    
T  36694781 agtaactttttca 36694769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 1205207 - 1205312
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |   |||| |||||||||||| |||||||||  ||  ||||||||||    
T  1205207 taagtccaagatgttgcaagtattactagatgaattactattgatcattaatcactaatcagcaatttaaaaatgaatcaaacaacaagatcaaaattaa 1205306  T
Q  118 cttttt 123  Q
    ||||||    
T  1205307 cttttt 1205312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 10555114 - 10555010
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaatt--actattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||||||| || || |||||||||||||| |||||||||||||  ||||||||||    
T  10555114 taagtccaagatattgcaagcattactagatgaattacactattgatcattaagta-ataaacaatttaaaaatgaatcaaacattaagatcaaaattaa 10555016  T
Q  118 cttttt 123  Q
     |||||    
T  10555015 tttttt 10555010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 33906487 - 33906597
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||  ||||||||||| |||| || | |||  |||||    
T  33906487 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatca--aatttaaaaatgaatcgaatagtaagatcaaa 33906584  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  33906585 attaactttttca 33906597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 18259354 - 18259466
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| |||||||||||||||||||||||||||||| | ||||||| |||| ||  ||||||||||||||||| |||||| ||||||| | |||    
T  18259354 acatgtaagtctaagatgttgcaagcattactagatgaattattgttgatcagtaatgagtaatcaacaatttaaaaatgaatcaatcattaaaattaaa 18259453  T
Q  113 attaactttttca 125  Q
    |||||| ||||||    
T  18259454 attaaccttttca 18259466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 1953894 - 1953791
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| |   ||||||||||| ||||| |||||||||||||  |||||||||| |||    
T  1953894 tccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaattttaaaatgaatcaaacattaagatcaaaattaatttt 1953795  T
Q  122 ttca 125  Q
    ||||    
T  1953794 ttca 1953791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 12876385 - 12876495
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||| ||||| ||| ||  ||||||| ||| |||||||||||||||||||| | |||    
T  12876385 acatgtaagtccaagatgttacaggcattactagatgaattactatttatcatgaataagtaatcaacagtttgaaaataaatcaaacattaaaattaaa 12876484  T
Q  113 attaacttttt 123  Q
    | |||||||||    
T  12876485 agtaacttttt 12876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 1149830 - 1149757
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  1149830 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat 1149757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 30654493 - 30654386
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    |||||||||||||||||||||||||||| |||||| || |||||||||||||| ||  || |||||||| ||||| ||||||| |||||| |||||||||    
T  30654493 taagtccaagatgttgcaagcattactaaatgaatatattattgatcattaatcagtaattaacaattt-aaaatgaatcaaatattaaaatcaaaatta 30654395  T
Q  117 actttttca 125  Q
    |||||||||    
T  30654394 actttttca 30654386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 33198077 - 33198189
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| || ||||||||||||| |||||||||||||||||||||||||||| |   ||||||||||||||||| |||||| ||||||  | ||     
T  33198077 acatgtaagtctaaaatgttgcaagcatcactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaag 33198176  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  33198177 attaactttttca 33198189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 40862694 - 40862807
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaattt-aaaaataaatcaaacattaaattcaa 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||  ||| ||||||| |||||| |||||||||||||  | ||    
T  40862694 acatgtaagtccaagatgttgcaagcattactagatgaattactatttgtcataaatcagtaatcgacaatttaaaaaatgaatcaaacattaagattaa 40862793  T
Q  112 aattaactttttca 125  Q
    || |||||||||||    
T  40862794 aagtaactttttca 40862807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 31933796 - 31933689
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||| |||||  ||||||||||||||||| |||||||||||||| ||  |||||| |||||||||| ||||||| |||||  ||||||||||    
T  31933796 taagtctaagatattgcagacattactagatgaattattattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaa 31933697  T
Q  118 ctttttca 125  Q
     |||||||    
T  31933696 ttttttca 31933689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 41362723 - 41362809
Alignment:
Q  41 attactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    ||||||||||||||||||||||||||||||  ||  ||||||||||||||||| ||| |||||||||  |||||||||| |||||||    
T  41362723 attactagatgaattactattgatcattaaccagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttca 41362809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 43025974 - 43026059
Alignment:
Q  40 cattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttttt 123  Q
    ||||| ||||| |||||||||||||||| ||| ||  ||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  43025974 cattattagataaattactattgatcatgaatcagtgatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 43026059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 9864428 - 9864509
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaa 99  Q
    ||||| ||||||||||||||||||||||||||||| |||| | ||||| |||  |  ||||||||||||||||| |||||||    
T  9864428 taagttcaagatgttgcaagcattactagatgaataactagtaatcatgaatcggtaatcaacaatttaaaaatgaatcaaa 9864509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 24211995 - 24212105
Alignment:
Q  18 tataagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaat 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| |||||||    
T  24211995 tataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaat 24212094  T
Q  115 taactttttca 125  Q
    |||||||||||    
T  24212095 taactttttca 24212105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 18797583 - 18797688
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  18797583 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 18797682  T
Q  118 cttttt 123  Q
    ||||||    
T  18797683 cttttt 18797688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 37110125 - 37110234
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | |||    
T  37110125 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaa 37110224  T
Q  113 attaactttt 122  Q
    ||||||||||    
T  37110225 attaactttt 37110234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 26588002 - 26587890
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||  | |||    
T  26588002 acatgtaagtccaagatgttgcaggcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaa 26587903  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  26587902 attaactttttca 26587890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 9355731 - 9355624
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |   ||||||||||||||||| |||||||||||||| ||||||||||    
T  9355731 taagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 9355632  T
Q  118 ctttttca 125  Q
    ||||||||    
T  9355631 ctttttca 9355624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 17842494 - 17842385
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | |||    
T  17842494 acatgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaa 17842395  T
Q  113 attaactttt 122  Q
    ||||||||||    
T  17842394 attaactttt 17842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 31578974 - 31578862
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||| ||||||||||| ||||||||| |||| |||||    
T  31578974 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaataatttaaaaatgaatcaaacaataaaatcaaa 31578875  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  31578874 attaactttttca 31578862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 35353359 - 35353471
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||||||| |||| ||||||||  |||||    
T  35353359 acatttaagtccaagatgttgcaagcattactagatgaatcactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaa 35353458  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  35353459 attaactttttca 35353471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 29173778 - 29173885
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  29173778 taagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 29173877  T
Q  118 ctttttca 125  Q
    ||||||||    
T  29173878 ctttttca 29173885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 30055783 - 30055886
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| | ||||| ||||||||||    
T  30055783 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 30055882  T
Q  118 cttt 121  Q
    ||||    
T  30055883 cttt 30055886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 22687482 - 22687594
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||| ||||| |||||||  | |||    
T  22687482 acatgtaagtccaagatgttgcaagcattaatagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcatacattaagattaaa 22687581  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  22687582 attaactttttca 22687594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 27284000 - 27284100
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat-aaatcaaacattaaattcaaaatta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||| ||||||||||||||| |||||||||    
T  27284000 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaataaaatcaaacattaaaatcaaaatta 27284099  T
Q  117 a 117  Q
    |    
T  27284100 a 27284100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 46481039 - 46480927
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||  ||| |    
T  46481039 acatgtaagtctaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaataaaacattaagatcata 46480940  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  46480939 attaactttttca 46480927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 37703403 - 37703296
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |   ||||||||||||||||| ||| |||||||||  ||||||||||    
T  37703403 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaa 37703304  T
Q  118 ctttttca 125  Q
    ||||||||    
T  37703303 ctttttca 37703296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 37704438 - 37704536
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||| |||| ||||    
T  37704438 taagtccaagatgttgcaagcattaccagatgaattactattgatcattaattagtaatcaacaatttacaaatgaatcaaacattaaaatcaagatta 37704536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 7335053 - 7335156
Alignment:
Q  24 tccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttt 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||| ||||||||||| |||||||||||||  |||||||||| |||    
T  7335053 tccaagatgttgcaagcattactagatgaattactattaatcattaatcagaaatcaataatttaaaaatgaatcaaacattaagatcaaaattaatttt 7335152  T
Q  122 ttca 125  Q
    ||||    
T  7335153 ttca 7335156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 10481861 - 10481968
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||  || |||||||||||||||||| ||| |||||  ||||||||||    
T  10481861 taagtccaagatgttgcaagtattactagatgaattactattgatcgttaatcagtaattaacaatttaaaaataaattaaatattaagatcaaaattaa 10481960  T
Q  118 ctttttca 125  Q
    ||||||||    
T  10481961 ctttttca 10481968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 11071459 - 11071558
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaat--tagatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |  ||||||||||||||||| |||||||||||||| ||| ||||||    
T  11071459 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa 11071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 31520646 - 31520539
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |  || |||||||||||||| |||||||||||||  ||| ||||||    
T  31520646 taagtccaagatgttgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaa 31520547  T
Q  118 ctttttca 125  Q
    ||||||||    
T  31520546 ctttttca 31520539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 32820963 - 32820853
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||| |||||| || |   ||||||||||||||||| |||||||||||||  |||||    
T  32820963 acatgtaagtctaagatgttgcaagcattactagatgaattactattaatcattcatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaa 32820864  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  32820863 attaacttttt 32820853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 48928207 - 48928097
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |   |||||||||||||||||||||| |||||| |  |||||    
T  48928207 acatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaataaatcgaacatttagatcaaa 48928108  T
Q  113 attaacttttt 123  Q
    ||||| |||||    
T  48928107 attaatttttt 48928097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 8861536 - 8861648
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| ||||||||| |||  | |||    
T  8861536 acatgtaagtctaagatgttgcatgcattactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacactaagattaaa 8861635  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  8861636 attaactttttca 8861648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 43925354 - 43925458
Alignment:
Q  23 gtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaactt 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||| |   ||||||||||||||||| |||||||||||||  | |||||||||||    
T  43925354 gtccaagatgttgcaagcattactagatgaattactattaatcatgaatcactaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactt 43925453  T
Q  121 tttca 125  Q
    |||||    
T  43925454 tttca 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 6546775 - 6546882
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| ||||||  | ||||||||    
T  6546775 taagtctaagatgaggcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaa 6546874  T
Q  118 ctttttca 125  Q
    ||||||||    
T  6546875 ctttttca 6546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 10359119 - 10359012
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||||||| |   ||||||||||||||||| ||||||||||||   ||||||||||    
T  10359119 taagtccaagattttgcaagcattactaaatgatttactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattatgatcaaaattaa 10359020  T
Q  118 ctttttca 125  Q
    ||||||||    
T  10359019 ctttttca 10359012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 25691455 - 25691344
Alignment:
Q  14 cacatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaa 111  Q
    ||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | ||    
T  25691455 cacatgtaagttcaaaatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaa 25691356  T
Q  112 aattaacttttt 123  Q
    |||||| |||||    
T  25691355 aattaaattttt 25691344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 37347277 - 37347384
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||  |  || |||||||||||||| |||||||||||||  ||| ||||||    
T  37347277 taagtccaagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaa 37347376  T
Q  118 ctttttca 125  Q
    ||||||||    
T  37347377 ctttttca 37347384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 34362083 - 34361974
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaa--attcaaaatt 115  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||  || |||||||||||||| |||||||||||||  ||| ||||||    
T  34362083 taagtccaagatattgcaaacattactagatgaattacttttgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaatt 34361984  T
Q  116 aactttttca 125  Q
    ||||||||||    
T  34361983 aactttttca 34361974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 5657391 - 5657278
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaa-ttcaa 111  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||| ||| || |||||||  | ||    
T  5657391 acatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatgagtaatcaaaaatttaaaaatgaataaatcattaaagattaa 5657292  T
Q  112 aattaactttttca 125  Q
    ||||||||||||||    
T  5657291 aattaactttttca 5657278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 15612664 - 15612559
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| |||||||||||||||||||||||||||||| | |||||||||||| ||  ||||||||||||||||| |||||| ||||||  | ||||||||    
T  15612664 taagtctaagatgttgcaagcattactagatgaattattgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaa 15612565  T
Q  118 cttttt 123  Q
    ||||||    
T  15612564 cttttt 15612559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 41764988 - 41764876
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||  ||||||||||||||||| || | ||||||||  |||||    
T  41764988 acatgtaagtccaagattttgcaagcattactggatgaattattattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaa 41764889  T
Q  113 attaactttttca 125  Q
    |||||| ||||||    
T  41764888 attaaccttttca 41764876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 44411445 - 44411345
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||  ||||||||||||||||| ||| |||||||||  ||| ||||||    
T  44411445 taagtccaagatgttgcaagcattactagatgaattaatattgaccattaatcagtaatcaacaatttaaaaatgaatgaaacattaagatcataattaa 44411346  T
Q  118 c 118  Q
    |    
T  44411345 c 44411345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 4583175 - 4583282
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||| ||| ||  ||||||||||||||||| ||| |||||||||  | ||||||||    
T  4583175 taagttcaagatgttgcaagcattactggatgaattactattaatcatgaatcagtcatcaacaatttaaaaatgaattaaacattaagattaaaattaa 4583274  T
Q  118 ctttttca 125  Q
    ||||||||    
T  4583275 ctttttca 4583282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 23111455 - 23111553
Alignment:
Q  27 aagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttttt 123  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||| ||  ||||||||||||||||| |||||||||||||  ||||| ||||||||||    
T  23111455 aagatgttgaaagcattactagaagaattactattgatcataaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaagttaacttttt 23111553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 12165999 - 12166072
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaat 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  12165999 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat 12166072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 12390559 - 12390450
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||  ||  ||||||||||||| ||  |||||||||  |||||    
T  12390559 acatgtaagtccaagatgttgcaaccattactagatgaattactatttatcattaatcagtaattgacaatttaaaaatgaaataaacattaagatcaaa 12390460  T
Q  113 attaactttt 122  Q
    ||||||||||    
T  12390459 attaactttt 12390450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 15672664 - 15672557
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  || |   ||||||||||||||||| ||| |||||||||  | ||||||||    
T  15672664 taagtccaaaatgttgcaagcattactagatgaattactattgatcatgcatcaataatcaacaatttaaaaatgaattaaacattaaggttaaaattaa 15672565  T
Q  118 ctttttca 125  Q
     |||||||    
T  15672564 ttttttca 15672557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 26980562 - 26980669
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||||||||||  |  ||||||||||||||||| |||||| ||||||  | ||||||||    
T  26980562 taagtctaagatgttgcaagtattactagatgaattattgttgatcattaatcggtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaa 26980661  T
Q  118 ctttttca 125  Q
    ||||||||    
T  26980662 ctttttca 26980669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 38258867 - 38258942
Alignment:
Q  52 aattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactttttca 125  Q
    |||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  38258867 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttca 38258942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 32432703 - 32432813
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||| ||||| ||| |   ||||||||||||||||| |||||||||||||  | |||    
T  32432703 acatgtaagtccaaggtgttgcaagcattactagatgaattattattaatcatgaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaa 32432802  T
Q  113 attaacttttt 123  Q
    | |||||||||    
T  32432803 agtaacttttt 32432813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 33688172 - 33688117
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaa 70  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33688172 acatgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaa 33688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 21991892 - 21991990
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaact 119  Q
    ||||||||||||||||||||||     ||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||  | |||||||||     
T  21991892 taagtccaagatgttgcaagca-----agatgaattactattgatcatca-tta-atcaacaatttaaaaatgaatcaaacattaagattaaaattaacc 21991984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 32593116 - 32593005
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||| |||  |||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||| |||  ||||||||  |||||    
T  32593116 acatgtaagtccaagatgttacaaatattactagataaattactatggatcattaatcagcaatcaacaattt-aaaatgaattgaacattaagatcaaa 32593018  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  32593017 attaactttttca 32593005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 44598917 - 44598971
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaat 71  Q
    |||| |||||| |||||||| ||||||||||||||||||  ||||||||||||||||    
T  44598917 acatgtaagtctaagatgttacaagcattactagatgaa--actattgatcattaat 44598971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 27421275 - 27421217
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta 73  Q
    |||| |||||||||||||||||||   |||| ||||||| || ||||||||||||||||    
T  27421275 acatgtaagtccaagatgttgcaaatgttacaagatgaaataatattgatcattaatta 27421217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 43686296 - 43686330
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat 54  Q
    ||||||||||||||||||||||||||| |||||||    
T  43686296 taagtccaagatgttgcaagcattactggatgaat 43686330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 6091085 - 6090980
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||||    
T  6091085 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 6090986  T
Q  118 cttttt 123  Q
    ||||||    
T  6090985 cttttt 6090980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 3879842 - 3879735
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||| |||||||||||||  | ||||||||    
T  3879842 taagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 3879743  T
Q  118 ctttttca 125  Q
    ||||||||    
T  3879742 ctttttca 3879735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 4318724 - 4318626
Alignment:
Q  21 aagtccaagatgttgcaagcattactagatgaattactattgatcattaat--tagatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||| | ||||||||    
T  4318724 aagtccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaataaatcaaacattaaaattaaaattaa 4318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 20768358 - 20768470
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||  ||||||||  |||||    
T  20768358 acatgtaagtccaaggtgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattgaacattaagatcaaa 20768457  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  20768458 attaactttttca 20768470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 1946110 - 1946221
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaa 111  Q
    |||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||    
T  1946110 acatgtaagtccaagatgttacaagcattattagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaa 1946209  T
Q  112 aattaacttttt 123  Q
    ||||||||||||    
T  1946210 aattaacttttt 1946221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 7234943 - 7234828
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta-----gatcaacaatttaaaaataaatcaaacattaaattc 109  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |      |||||||||||||||||||||| ||||||||  ||    
T  7234943 acatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaacaacaatcaacaatttaaaaataaatcgaacattaagatc 7234844  T
Q  110 aaaattaactttttca 125  Q
    ||||||||||||||||    
T  7234843 aaaattaactttttca 7234828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 8513509 - 8513609
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaact 119  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||||||||||||| | ||||||||||    
T  8513509 taagtccaaaatcttgcaagcattactagatgaattactattgatcatta-----atcaacaatttaaaaatgaatcaaacattaaaattaaaattaact 8513603  T
Q  120 ttttca 125  Q
    ||||||    
T  8513604 ttttca 8513609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 33892920 - 33892808
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||||  | |||    
T  33892920 acatgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaggttaaa 33892821  T
Q  113 attaactttttca 125  Q
    |||||||||||||    
T  33892820 attaactttttca 33892808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 5627672 - 5627778
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||  ||||||||||||||||| ||||||| |||||| |||||||||    
T  5627672 taagtccaagatgttgcaagcattactaggtgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaatta 5627771  T
Q  117 acttttt 123  Q
    | |||||    
T  5627772 atttttt 5627778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 6089184 - 6089284
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaattaact 119  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||     ||||||||||||||||| |||||||||||||| | |||||||| |    
T  6089184 taagtccaaaatgttgcaagcattactatatgaattactattgatcatta-----atcaacaatttaaaaatgaatcaaacattaaaattaaaattaatt 6089278  T
Q  120 ttttca 125  Q
    ||||||    
T  6089279 ttttca 6089284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 7054676 - 7054568
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||||||| |   |||||||||||||| || |||||||||||||| |||||||||    
T  7054676 taagtccaagatgttgcaaacattactaaatgaatatactattgatcattaatcattaatcaacaatttaaagatgaatcaaacattaaaatcaaaatta 7054577  T
Q  117 actttttca 125  Q
    |||||||||    
T  7054576 actttttca 7054568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 33619106 - 33619219
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatta-----gatcaacaatttaaaaataaatcaaacattaaattc 109  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |      ||||||||||||||||| |||| ||||||||  |     
T  33619106 acatgtaagtccaatatgttgcaagcattactagatgaattactattgatcattaatgatcagcaatcaacaatttaaaaatgaatcgaacattaagatt 33619205  T
Q  110 aaaattaacttttt 123  Q
    ||||||||||||||    
T  33619206 aaaattaacttttt 33619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 21017014 - 21016916
Alignment:
Q  27 aagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaacttttt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||||||||||| |||| ||||||| |||||  | ||||||||||||||    
T  21017014 aagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttataaatgaatcaaatattaagattaaaattaacttttt 21016916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 29182445 - 29182549
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||| ||||||||||||| |||||||||||||||||   ||||||||||| |   ||||||||||||||||| |||||| ||||||    ||||||||    
T  29182445 taagtctaagatgttgcaagtattactagatgaattac---tgatcattaatcaacaatcaacaatttaaaaatgaatcaatcattaagactaaaattaa 29182541  T
Q  118 ctttttca 125  Q
    ||||||||    
T  29182542 ctttttca 29182549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 33724103 - 33724062
Alignment:
Q  77 caacaatttaaaaataaatcaaacattaaattcaaaattaac 118  Q
    ||||||||||||||| |||||||||||||  |||||||||||    
T  33724103 caacaatttaaaaatgaatcaaacattaagatcaaaattaac 33724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 408338 - 408226
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||| | |||    
T  408338 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaa 408239  T
Q  113 attaactttttca 125  Q
    ||||| |||||||    
T  408238 attaattttttca 408226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 94004 - 93900
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatta--gatcaacaatttaaaaataaatcaaacattaaattcaaaattaa 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |   ||||||||||| ||||| |||||||||||||| ||||||||||    
T  94004 taagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcactaatcaacaattt-aaaatgaatcaaacattaaaatcaaaattaa 93906  T
Q  118 cttttt 123  Q
    ||||||    
T  93905 cttttt 93900  T

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Target: scaffold0002; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 412 - 516
Alignment:
Q  23 gtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaattaactt 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  ||||||||||||||||| |||||||||||||  | |||||||||||    
T  412 gtccaagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactt 511  T
Q  121 tttca 125  Q
    |||||    
T  512 tttca 516  T

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Target: scaffold0291 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 8163 - 8271
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||| | ||||| |||||    
T  8163 acatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaa 8262  T
Q  113 attaacttt 121  Q
    |||||||||    
T  8263 attaacttt 8271  T

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Target: scaffold0318 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 12185 - 12294
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||  | |||    
T  12185 acatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat-aatcaaacattaagattaaa 12283  T
Q  113 attaacttttt 123  Q
    |||||||||||    
T  12284 attaacttttt 12294  T

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Target: scaffold0061 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 44232 - 44344
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||  ||||||||||||||||| ||| |||||||||| |||||    
T  44232 acatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaa 44331  T
Q  113 attaactttttca 125  Q
    || ||||||||||    
T  44332 atcaactttttca 44344  T

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Target: scaffold0017 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 154555 - 154443
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaa 112  Q
    |||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||  ||||||||||||||||| ||| |||||||||| |||||    
T  154555 acatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaa 154456  T
Q  113 attaactttttca 125  Q
    || ||||||||||    
T  154455 atcaactttttca 154443  T

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Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 145920 - 145812
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaat-tactattgatcattaattag--atcaacaatttaaaaataaatcaaacattaaattcaaaatta 116  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||||||||| ||  || || ||||||||||| ||| |||||||||| |||||||||    
T  145920 taagtccaagatgttgcaagcattactaaatgaatatacaattgatcattaatcagtaataaaaaatttaaaaatgaattaaacattaaaatcaaaatta 145821  T
Q  117 actttttca 125  Q
    |||||||||    
T  145820 actttttca 145812  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 100996 - 101045
Alignment:
Q  20 taagtccaagatgttgcaagcattactagatgaattactattgatcattaat 71  Q
    |||||||||||||||||||||||||||| ||| |||||||  ||||||||||    
T  100996 taagtccaagatgttgcaagcattactaaatgcattacta--gatcattaat 101045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 267561 - 267664
Alignment:
Q  15 acatataagtccaagatgttgcaagcattactagatgaattactattgatcattaattagatcaacaatttaaaaataaatcaaacattaaattcaaaat 114  Q
    |||| ||||||||||||| |||||| ||||||||||||||||      | || | | || ||||||||||||||||| ||||||| |||||  |||||||    
T  267561 acatgtaagtccaagatgctgcaagaattactagatgaatta------accaatcagta-atcaacaatttaaaaatgaatcaaatattaagatcaaaat 267653  T
Q  115 taactttttca 125  Q
    ||| |||||||    
T  267654 taattttttca 267664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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