View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5876_high_87 (Length: 229)
Name: NF5876_high_87
Description: NF5876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5876_high_87 |
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Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 29079652 - 29079454
Alignment:
| Q |
11 |
gaagaatataagatactataaattatacataaatatatcattttgtcattcattgtttatttctagaagttatatttttatcattcaacactattactgc |
110 |
Q |
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| T |
29079652 |
gaagaatataagatactataaattatacataaatatatcattttgtcattcattgtttatttctagaagttatatttttatcattcaacactattactgc |
29079553 |
T |
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| Q |
111 |
tcatgtggattttgtctctttctcttatgaaaggttacaatagaatgacacaatattataaagggttgatagaaatttgatttcattttttatgtgtta |
209 |
Q |
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| T |
29079552 |
tcatgtggattttgtctctttctcttatgaaaggttacaatagaatgacacaatattataaagggttgatagaaatttgatttcattttttatgtgtta |
29079454 |
T |
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