View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5876_low_46 (Length: 289)

Name: NF5876_low_46
Description: NF5876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5876_low_46
NF5876_low_46
[»] chr8 (42 HSPs)
chr8 (1-289)||(1826136-1826424)
chr8 (1-289)||(1860581-1860869)
chr8 (251-289)||(3869294-3869332)
chr8 (251-289)||(37393480-37393518)
chr8 (250-289)||(16645893-16645932)
chr8 (238-289)||(24456997-24457048)
chr8 (251-289)||(119120-119158)
chr8 (251-289)||(5416815-5416853)
chr8 (251-289)||(6843498-6843536)
chr8 (251-289)||(8653939-8653977)
chr8 (251-289)||(24456737-24456775)
chr8 (251-289)||(30568621-30568659)
chr8 (251-289)||(30872786-30872824)
chr8 (251-289)||(37393822-37393860)
chr8 (251-289)||(39240033-39240071)
chr8 (243-289)||(39240364-39240410)
chr8 (251-289)||(40040165-40040203)
chr8 (251-289)||(44678320-44678358)
chr8 (238-286)||(6844788-6844836)
chr8 (249-289)||(9495368-9495408)
chr8 (245-289)||(31230958-31231002)
chr8 (251-286)||(11639055-11639090)
chr8 (250-289)||(18018131-18018170)
chr8 (246-289)||(26736123-26736166)
chr8 (251-289)||(758347-758385)
chr8 (251-281)||(1825813-1825843)
chr8 (251-281)||(1860258-1860288)
chr8 (259-289)||(5417158-5417188)
chr8 (251-285)||(8654285-8654319)
chr8 (251-289)||(11639380-11639418)
chr8 (251-281)||(12873399-12873429)
chr8 (251-289)||(18017793-18017831)
chr8 (251-289)||(29027313-29027351)
chr8 (259-289)||(31230624-31230654)
chr8 (251-289)||(35223777-35223815)
chr8 (251-289)||(35224112-35224150)
chr8 (259-289)||(39912264-39912294)
chr8 (253-289)||(14920416-14920452)
chr8 (253-289)||(14920756-14920792)
chr8 (251-283)||(21512416-21512448)
chr8 (238-282)||(32733695-32733739)
chr8 (245-289)||(40032423-40032467)
[»] chr6 (24 HSPs)
chr6 (243-289)||(9173896-9173942)
chr6 (251-289)||(25551350-25551388)
chr6 (251-289)||(11524708-11524746)
chr6 (251-289)||(24604878-24604916)
chr6 (251-289)||(25551681-25551719)
chr6 (251-289)||(33971931-33971969)
chr6 (248-289)||(13155839-13155880)
chr6 (248-289)||(13160695-13160736)
chr6 (251-288)||(35132936-35132973)
chr6 (251-289)||(3288933-3288971)
chr6 (243-285)||(3289259-3289301)
chr6 (251-289)||(3338480-3338518)
chr6 (251-289)||(3338820-3338858)
chr6 (251-281)||(6220059-6220089)
chr6 (251-289)||(11525110-11525148)
chr6 (259-289)||(24605218-24605248)
chr6 (251-289)||(29009957-29009995)
chr6 (243-281)||(32283021-32283059)
chr6 (251-289)||(33329209-33329247)
chr6 (251-289)||(33544825-33544863)
chr6 (251-289)||(33548202-33548240)
chr6 (251-289)||(35132604-35132642)
chr6 (251-284)||(1860835-1860868)
chr6 (261-289)||(11524778-11524806)
[»] chr4 (46 HSPs)
chr4 (243-289)||(34958827-34958873)
chr4 (243-289)||(46535518-46535564)
chr4 (251-289)||(29864520-29864558)
chr4 (251-289)||(32384656-32384694)
chr4 (251-289)||(38866401-38866439)
chr4 (251-289)||(52914955-52914993)
chr4 (244-289)||(18862786-18862831)
chr4 (246-289)||(10014463-10014506)
chr4 (246-289)||(10017813-10017856)
chr4 (246-289)||(10021604-10021647)
chr4 (246-289)||(40067693-40067736)
chr4 (251-289)||(1157551-1157589)
chr4 (251-285)||(8247095-8247129)
chr4 (251-289)||(9010850-9010888)
chr4 (251-289)||(21217850-21217888)
chr4 (251-289)||(32385156-32385194)
chr4 (251-289)||(44710406-44710444)
chr4 (251-289)||(45911919-45911957)
chr4 (251-289)||(46200487-46200525)
chr4 (251-289)||(46535867-46535905)
chr4 (251-289)||(46621272-46621310)
chr4 (251-289)||(54136094-54136132)
chr4 (252-289)||(33625868-33625905)
chr4 (252-289)||(33882294-33882331)
chr4 (252-289)||(46620931-46620968)
chr4 (245-289)||(33626209-33626253)
chr4 (251-282)||(54191936-54191967)
chr4 (251-289)||(1205381-1205419)
chr4 (251-289)||(1205722-1205760)
chr4 (251-289)||(8751290-8751328)
chr4 (251-289)||(9010508-9010546)
chr4 (251-281)||(9657670-9657700)
chr4 (251-281)||(11102328-11102358)
chr4 (259-289)||(11242809-11242839)
chr4 (251-289)||(21218192-21218230)
chr4 (251-289)||(25593436-25593474)
chr4 (251-289)||(29970196-29970234)
chr4 (251-289)||(37515798-37515836)
chr4 (251-289)||(38866745-38866783)
chr4 (251-285)||(40067351-40067385)
chr4 (251-289)||(43969557-43969595)
chr4 (251-281)||(44169982-44170012)
chr4 (251-285)||(45683466-45683500)
chr4 (259-289)||(48209959-48209989)
chr4 (252-289)||(44432969-44433006)
chr4 (251-288)||(46200831-46200868)
[»] chr2 (54 HSPs)
chr2 (243-289)||(20908856-20908902)
chr2 (245-289)||(18565348-18565392)
chr2 (250-289)||(39912629-39912668)
chr2 (251-289)||(4104504-4104542)
chr2 (251-289)||(16261215-16261253)
chr2 (251-289)||(16655951-16655989)
chr2 (251-289)||(27132514-27132552)
chr2 (243-289)||(41377699-41377745)
chr2 (244-289)||(4104155-4104200)
chr2 (252-289)||(16655610-16655647)
chr2 (251-287)||(34820626-34820662)
chr2 (246-289)||(4121108-4121151)
chr2 (251-289)||(12303788-12303826)
chr2 (251-289)||(13354522-13354560)
chr2 (251-289)||(16736104-16736142)
chr2 (251-289)||(17856534-17856572)
chr2 (251-289)||(20908514-20908552)
chr2 (251-289)||(25642613-25642651)
chr2 (251-289)||(28631619-28631657)
chr2 (251-289)||(31450669-31450707)
chr2 (243-289)||(31451011-31451057)
chr2 (251-289)||(32933594-32933632)
chr2 (243-285)||(32933940-32933982)
chr2 (251-289)||(36211744-36211782)
chr2 (251-289)||(40694198-40694236)
chr2 (244-285)||(28202856-28202897)
chr2 (251-287)||(27132857-27132893)
chr2 (251-289)||(4120767-4120805)
chr2 (251-289)||(5961672-5961710)
chr2 (259-289)||(12304130-12304160)
chr2 (251-289)||(13354180-13354218)
chr2 (259-289)||(16260882-16260912)
chr2 (243-289)||(20297405-20297451)
chr2 (251-289)||(27476369-27476407)
chr2 (251-289)||(27476712-27476750)
chr2 (251-289)||(28203205-28203243)
chr2 (251-289)||(34127909-34127947)
chr2 (251-289)||(34484238-34484276)
chr2 (251-289)||(36442136-36442174)
chr2 (251-289)||(36442479-36442517)
chr2 (251-289)||(37412596-37412634)
chr2 (259-289)||(37744460-37744490)
chr2 (251-289)||(38275480-38275518)
chr2 (251-289)||(38275802-38275840)
chr2 (251-289)||(39150170-39150208)
chr2 (251-289)||(39454454-39454492)
chr2 (251-289)||(41377358-41377395)
chr2 (251-289)||(43183928-43183966)
chr2 (251-285)||(44610865-44610899)
chr2 (252-289)||(34127570-34127607)
chr2 (252-289)||(34820283-34820320)
chr2 (253-289)||(10833380-10833416)
chr2 (253-289)||(25642273-25642309)
chr2 (251-287)||(45389134-45389170)
[»] chr3 (49 HSPs)
chr3 (248-289)||(14353392-14353433)
chr3 (251-289)||(2829410-2829448)
chr3 (243-289)||(8846071-8846117)
chr3 (251-289)||(41998159-41998197)
chr3 (251-289)||(44069468-44069506)
chr3 (251-289)||(54081629-54081667)
chr3 (252-289)||(49222040-49222077)
chr3 (246-289)||(8846421-8846464)
chr3 (246-289)||(44069121-44069164)
chr3 (251-289)||(4846941-4846979)
chr3 (251-289)||(10756721-10756759)
chr3 (251-289)||(12123093-12123131)
chr3 (251-289)||(17274121-17274159)
chr3 (251-289)||(21169669-21169707)
chr3 (251-289)||(34521602-34521640)
chr3 (251-289)||(35580294-35580332)
chr3 (251-289)||(40410715-40410753)
chr3 (243-289)||(43527018-43527064)
chr3 (251-289)||(45171071-45171109)
chr3 (251-289)||(45871700-45871738)
chr3 (251-289)||(54081287-54081325)
chr3 (251-289)||(54107672-54107710)
chr3 (252-289)||(22354946-22354983)
chr3 (253-289)||(35753408-35753444)
chr3 (238-285)||(52609711-52609758)
chr3 (251-289)||(7274656-7274694)
chr3 (259-289)||(9028202-9028232)
chr3 (259-289)||(12123424-12123454)
chr3 (251-289)||(15862520-15862558)
chr3 (251-289)||(26332322-26332360)
chr3 (259-289)||(27940283-27940313)
chr3 (251-289)||(28691117-28691155)
chr3 (251-289)||(28691458-28691496)
chr3 (251-289)||(31513866-31513904)
chr3 (251-289)||(31514207-31514245)
chr3 (259-289)||(33812735-33812765)
chr3 (251-289)||(34521269-34521307)
chr3 (251-289)||(34629985-34630023)
chr3 (251-289)||(41208404-41208442)
chr3 (251-289)||(41208745-41208783)
chr3 (259-289)||(41997830-41997860)
chr3 (251-289)||(45171412-45171450)
chr3 (259-289)||(45872034-45872064)
chr3 (251-289)||(46766959-46766997)
chr3 (251-289)||(51170726-51170764)
chr3 (252-289)||(7274987-7275024)
chr3 (260-289)||(7743110-7743139)
chr3 (244-285)||(43899107-43899148)
chr3 (253-289)||(53841371-53841407)
[»] scaffold0188 (1 HSPs)
scaffold0188 (243-289)||(13886-13932)
[»] chr7 (26 HSPs)
chr7 (243-289)||(11679047-11679093)
chr7 (251-289)||(23472596-23472634)
chr7 (251-289)||(39118013-39118051)
chr7 (251-289)||(2357400-2357438)
chr7 (251-289)||(8769285-8769323)
chr7 (251-289)||(9034660-9034698)
chr7 (251-289)||(10625429-10625467)
chr7 (245-287)||(23472903-23472945)
chr7 (251-289)||(31715966-31716004)
chr7 (251-289)||(32706735-32706773)
chr7 (251-289)||(35085742-35085780)
chr7 (251-289)||(47250891-47250929)
chr7 (251-286)||(21522564-21522599)
chr7 (258-289)||(48704153-48704184)
chr7 (251-289)||(8769627-8769665)
chr7 (255-289)||(9231022-9231056)
chr7 (259-289)||(10625117-10625147)
chr7 (251-289)||(18731022-18731060)
chr7 (251-289)||(31715636-31715674)
chr7 (251-289)||(34568586-34568624)
chr7 (251-289)||(35086085-35086123)
chr7 (251-289)||(43726587-43726625)
chr7 (251-289)||(44486277-44486315)
chr7 (251-289)||(47251241-47251279)
chr7 (251-281)||(47305130-47305160)
chr7 (251-287)||(43726247-43726283)
[»] chr5 (45 HSPs)
chr5 (251-289)||(10656097-10656135)
chr5 (251-289)||(15670496-15670534)
chr5 (251-289)||(42710695-42710733)
chr5 (243-287)||(40589049-40589093)
chr5 (243-287)||(40589652-40589696)
chr5 (251-289)||(3878484-3878522)
chr5 (251-289)||(5088473-5088511)
chr5 (251-289)||(5460291-5460329)
chr5 (251-289)||(5624382-5624420)
chr5 (251-289)||(7399080-7399118)
chr5 (251-289)||(8418529-8418567)
chr5 (251-289)||(15476269-15476307)
chr5 (251-289)||(19204947-19204985)
chr5 (251-289)||(25923121-25923159)
chr5 (251-289)||(26288994-26289032)
chr5 (255-289)||(26289027-26289061)
chr5 (251-289)||(29023940-29023978)
chr5 (251-289)||(35263497-35263535)
chr5 (251-289)||(36751905-36751943)
chr5 (252-289)||(5087811-5087848)
chr5 (244-289)||(28392115-28392160)
chr5 (252-289)||(39706396-39706433)
chr5 (249-289)||(9693263-9693303)
chr5 (251-282)||(5460191-5460222)
chr5 (242-289)||(18514282-18514329)
chr5 (251-289)||(3879357-3879395)
chr5 (251-289)||(9692922-9692959)
chr5 (251-289)||(10656439-10656477)
chr5 (251-289)||(12593459-12593497)
chr5 (251-285)||(14051892-14051926)
chr5 (243-285)||(17861034-17861076)
chr5 (251-289)||(19205288-19205326)
chr5 (251-289)||(19615425-19615463)
chr5 (251-289)||(21750813-21750851)
chr5 (251-289)||(31909275-31909313)
chr5 (251-289)||(33699278-33699316)
chr5 (251-289)||(35263839-35263877)
chr5 (251-289)||(36752246-36752284)
chr5 (251-289)||(38416479-38416517)
chr5 (251-289)||(40589399-40589437)
chr5 (251-289)||(40590002-40590040)
chr5 (252-289)||(12695031-12695068)
chr5 (260-289)||(31656370-31656399)
chr5 (261-289)||(17736592-17736620)
chr5 (253-289)||(28391773-28391809)
[»] chr1 (50 HSPs)
chr1 (243-289)||(24590570-24590616)
chr1 (251-289)||(50118350-50118388)
chr1 (248-289)||(19986467-19986508)
chr1 (245-289)||(51691871-51691915)
chr1 (251-285)||(5117996-5118030)
chr1 (251-289)||(9881555-9881593)
chr1 (251-289)||(14118533-14118571)
chr1 (251-289)||(16268034-16268072)
chr1 (251-289)||(23281355-23281393)
chr1 (251-289)||(25088019-25088057)
chr1 (251-289)||(25088360-25088398)
chr1 (251-289)||(28112724-28112762)
chr1 (251-289)||(29256835-29256873)
chr1 (251-289)||(30293357-30293395)
chr1 (251-289)||(33753228-33753266)
chr1 (251-289)||(34028724-34028762)
chr1 (251-289)||(34029066-34029104)
chr1 (251-289)||(34279586-34279624)
chr1 (251-289)||(45305754-45305792)
chr1 (251-289)||(50921063-50921101)
chr1 (244-289)||(22584697-22584742)
chr1 (251-287)||(11395007-11395043)
chr1 (257-289)||(51810483-51810515)
chr1 (250-289)||(10923364-10923403)
chr1 (246-289)||(13944856-13944899)
chr1 (238-289)||(18794038-18794089)
chr1 (246-289)||(19886259-19886302)
chr1 (254-289)||(50574862-50574897)
chr1 (251-289)||(1832009-1832047)
chr1 (251-289)||(4045102-4045140)
chr1 (259-289)||(10654374-10654404)
chr1 (251-289)||(11787743-11787781)
chr1 (251-289)||(14775748-14775786)
chr1 (251-289)||(14776080-14776118)
chr1 (251-285)||(16267718-16267752)
chr1 (251-289)||(28970422-28970460)
chr1 (251-289)||(30293016-30293054)
chr1 (251-289)||(30611566-30611604)
chr1 (251-289)||(31125939-31125977)
chr1 (251-289)||(35986235-35986273)
chr1 (251-289)||(36077274-36077312)
chr1 (251-289)||(36884725-36884763)
chr1 (251-289)||(37199266-37199304)
chr1 (259-289)||(50921436-50921466)
chr1 (251-285)||(51692219-51692253)
chr1 (259-289)||(52412609-52412639)
chr1 (251-288)||(10654033-10654070)
chr1 (251-288)||(34279243-34279280)
chr1 (252-281)||(36657854-36657883)
chr1 (251-283)||(32563962-32563994)
[»] scaffold0168 (1 HSPs)
scaffold0168 (245-289)||(11832-11876)
[»] scaffold0051 (2 HSPs)
scaffold0051 (246-289)||(40697-40740)
scaffold0051 (251-289)||(40355-40393)
[»] scaffold0809 (2 HSPs)
scaffold0809 (251-289)||(4663-4701)
scaffold0809 (251-285)||(4341-4375)
[»] scaffold0022 (1 HSPs)
scaffold0022 (243-281)||(93183-93221)
[»] scaffold0016 (1 HSPs)
scaffold0016 (244-289)||(90801-90846)


Alignment Details
Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 1826424 - 1826136
Alignment:
1 catataactcaaaatcttttaaatctagaacacaaaacaccctctccaaacatgaatctctccaacaacaaataattattcttcctattacagacaactc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
1826424 catataactcaaaatcttttaaatctagaacacaaaacaccctctccaaacatgaatctctccaacaacaaaaaattattcttcctattacagacaactc 1826325  T
101 tcaaaagactagacaccttaatatcatctcccaaaactcagccacattgaaaaccaatatttagtaacaagcacctcaatccacaaaccctctaattcac 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
1826324 tcaaaagactagacaccttaataccatctcccaaaactcagccacattgaaaaccaatatttagtaacaagcacctcaatccacaaaccctctaattcac 1826225  T
201 atacactctcctacaacttgacccatattctctctccatttgtttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
1826224 atacactctcctacaacttgacccatattctctctccatttgtttttggataaattgtatttttggtcccttaactatttaggtagtat 1826136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 1860869 - 1860581
Alignment:
1 catataactcaaaatcttttaaatctagaacacaaaacaccctctccaaacatgaatctctccaacaacaaataattattcttcctattacagacaactc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
1860869 catataactcaaaatcttttaaatctagaacacaaaacaccctctccaaacatgaatctctccaacaacaaaaaattattcttcctattacagacaactc 1860770  T
101 tcaaaagactagacaccttaatatcatctcccaaaactcagccacattgaaaaccaatatttagtaacaagcacctcaatccacaaaccctctaattcac 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
1860769 tcaaaagactagacaccttaataccatctcccaaaactcagccacattgaaaaccaatatttagtaacaagcacctcaatccacaaaccctctaattcac 1860670  T
201 atacactctcctacaacttgacccatattctctctccatttgtttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
1860669 atacactctcctacaacttgacccatattctctctccatttgtttttggataaattgtatttttggtcccttaactatttaggtagtat 1860581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 3869332 - 3869294
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
3869332 taaattgtatttttggtcccttaactatttaggtagtat 3869294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 37393480 - 37393518
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
37393480 taaattgtatttttggtcccttaactatttaggtagtat 37393518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 16645932 - 16645893
Alignment:
250 ataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||| |||||||||||||||||||||||||||||||    
16645932 ataaattgcatttttggtcccttaactatttaggtagtat 16645893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 24457048 - 24456997
Alignment:
238 atttgtttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| |||| || ||||||| |||||||||||||||||||||||||||||||    
24457048 atttattttaggctaaattgcatttttggtcccttaactatttaggtagtat 24456997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 119120 - 119158
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
119120 taaattgcatttttggtcccttaactatttaggtagtat 119158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 5416815 - 5416853
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||| ||||||||||||||||||    
5416815 taaattgtatttttggtcccctaactatttaggtagtat 5416853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 6843498 - 6843536
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
6843498 taaattgcatttttggtcccttaactatttaggtagtat 6843536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 8653939 - 8653977
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||| ||||||||||||||||||    
8653939 taaattgtatttttggtcccctaactatttaggtagtat 8653977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 24456737 - 24456775
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
24456737 taaattgcatttttggtcccttaactatttaggtagtat 24456775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 30568659 - 30568621
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||| ||||||    
30568659 taaattgtatttttggtcccttaactatttagttagtat 30568621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 30872786 - 30872824
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
30872786 taaattgcatttttggtcccttaactatttaggtagtat 30872824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 37393860 - 37393822
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
37393860 taaattgcatttttggtcccttaactatttaggtagtat 37393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 39240033 - 39240071
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
39240033 taaattgcatttttggtcccttaactatttaggtagtat 39240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 39240410 - 39240364
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||    
39240410 tttttggttaaattgcatttttggtcccttaattatttaggtagtat 39240364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 40040165 - 40040203
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
40040165 taaattgcatttttggtcccttaactatttaggtagtat 40040203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 44678320 - 44678358
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
44678320 taaattgcatttttggtcccttaactatttaggtagtat 44678358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 6844836 - 6844788
Alignment:
238 atttgtttttggataaattgtatttttggtcccttaactatttaggtag 286  Q
    |||| ||||||| ||||||| |||||||||| |||||||||||||||||    
6844836 atttttttttgggtaaattgcatttttggtctcttaactatttaggtag 6844788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 9495408 - 9495368
Alignment:
249 gataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
9495408 gataaattgcatttttggtcccttaactatttaagtagtat 9495368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 31231002 - 31230958
Alignment:
245 tttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||    
31231002 tttggctaaattacatttttggtcccttaactatttaggtagtat 31230958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 286
Target Start/End: Original strand, 11639055 - 11639090
Alignment:
251 taaattgtatttttggtcccttaactatttaggtag 286  Q
    |||||||||||||| |||||||||||||||||||||    
11639055 taaattgtattttttgtcccttaactatttaggtag 11639090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 18018170 - 18018131
Alignment:
250 ataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||| ||||||||||||||||||||||||| |||||    
18018170 ataaattgcatttttggtcccttaactatttaggaagtat 18018131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 26736123 - 26736166
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||    
26736123 ttggttaaattgcatttttggtctcttaactatttaggtagtat 26736166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 758347 - 758385
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||| ||||||||||||||||||||||    
758347 taaattgcatttttggccccttaactatttaggtagtat 758385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 1825813 - 1825843
Alignment:
251 taaattgtatttttggtcccttaactattta 281  Q
    |||||||||||||||||||||||||||||||    
1825813 taaattgtatttttggtcccttaactattta 1825843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 1860258 - 1860288
Alignment:
251 taaattgtatttttggtcccttaactattta 281  Q
    |||||||||||||||||||||||||||||||    
1860258 taaattgtatttttggtcccttaactattta 1860288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 5417188 - 5417158
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
5417188 atttttggtcccttaactatttaggtagtat 5417158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 8654319 - 8654285
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||| |||||||||||||||||||||||||||    
8654319 taaattgcatttttggtcccttaactatttaggta 8654285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 11639418 - 11639380
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
11639418 taaattgcatttttcgtcccttaactatttaggtagtat 11639380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Complemental strand, 12873429 - 12873399
Alignment:
251 taaattgtatttttggtcccttaactattta 281  Q
    |||||||||||||||||||||||||||||||    
12873429 taaattgtatttttggtcccttaactattta 12873399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 18017793 - 18017831
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| || ||||||||||||||||||||||||||||    
18017793 taaattgcatatttggtcccttaactatttaggtagtat 18017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 29027351 - 29027313
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||| ||||||||||||||||||||    
29027351 taaattatatttttggtctcttaactatttaggtagtat 29027313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 31230624 - 31230654
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
31230624 atttttggtcccttaactatttaggtagtat 31230654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 35223777 - 35223815
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||| ||||||||||||||||    
35223777 taaattgcatttttggtccctttactatttaggtagtat 35223815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 35224150 - 35224112
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||| ||||||    
35224150 taaattgcatttttggtcccttaactatttagttagtat 35224112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 39912294 - 39912264
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
39912294 atttttggtcccttaactatttaggtagtat 39912264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 14920416 - 14920452
Alignment:
253 aattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||||| |||||||||||||||||||||    
14920416 aattgcatttttggttccttaactatttaggtagtat 14920452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 14920792 - 14920756
Alignment:
253 aattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||||||||||||||||||| |||||||    
14920792 aattgcatttttggtcccttaactatttaagtagtat 14920756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 21512416 - 21512448
Alignment:
251 taaattgtatttttggtcccttaactatttagg 283  Q
    |||||||||||||| ||||||||||||||||||    
21512416 taaattgtatttttcgtcccttaactatttagg 21512448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 32733695 - 32733739
Alignment:
238 atttgtttttggataaattgtatttttggtcccttaactatttag 282  Q
    |||| |||| || |||||||||||||||||| |||||||||||||    
32733695 atttattttaggttaaattgtatttttggtctcttaactatttag 32733739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 40032423 - 40032467
Alignment:
245 tttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||| |||||||||| ||||| ||||||||||||||    
40032423 tttggctaaattgcatttttggtcacttaattatttaggtagtat 40032467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 9173896 - 9173942
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
9173896 tttttggctaaattgtatttttggtcccttaactatttaggtagtat 9173942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 25551350 - 25551388
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
25551350 taaattgtatttttggtcccttaactatttaggtagtat 25551388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 11524708 - 11524746
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||| |||||||||||||||||||    
11524708 taaattgtatttttggtcctttaactatttaggtagtat 11524746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 24604878 - 24604916
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
24604878 taaattgcatttttggtcccttaactatttaggtagtat 24604916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 25551719 - 25551681
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||| |||||||    
25551719 taaattgtatttttggtcccttaactatttaagtagtat 25551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 33971931 - 33971969
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
33971931 taaattgcatttttggtcccttaactatttaggtagtat 33971969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 13155839 - 13155880
Alignment:
248 ggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
13155839 ggataaattatatttttggtctcttaactatttaggtagtat 13155880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 13160695 - 13160736
Alignment:
248 ggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
13160695 ggataaattatatttttggtctcttaactatttaggtagtat 13160736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 35132973 - 35132936
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagta 288  Q
    ||||||||||||| ||||||||||||||||||||||||    
35132973 taaattgtattttcggtcccttaactatttaggtagta 35132936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 3288933 - 3288971
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||| ||||||||||||||||||||||||||    
3288933 taaattgcatttatggtcccttaactatttaggtagtat 3288971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 3289301 - 3289259
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||    
3289301 tttttggctaaattgcatttttggtccctaaactatttaggta 3289259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 3338480 - 3338518
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
3338480 taaattgcattttttgtcccttaactatttaggtagtat 3338518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 3338858 - 3338820
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||| |||||||    
3338858 taaattttatttttggtcccttaactatttaagtagtat 3338820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 6220059 - 6220089
Alignment:
251 taaattgtatttttggtcccttaactattta 281  Q
    |||||||||||||||||||||||||||||||    
6220059 taaattgtatttttggtcccttaactattta 6220089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 11525148 - 11525110
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||| |||||||||||||    
11525148 taaattgcatttttggtcccttaacaatttaggtagtat 11525110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 24605248 - 24605218
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
24605248 atttttggtcccttaactatttaggtagtat 24605218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 29009957 - 29009995
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||||||||| |||||||    
29009957 taaattgaatttttggtcccttaactatttacgtagtat 29009995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 32283021 - 32283059
Alignment:
243 tttttggataaattgtatttttggtcccttaactattta 281  Q
    ||||||| |||||| ||||||||||||||||||||||||    
32283021 tttttggctaaattatatttttggtcccttaactattta 32283059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 33329209 - 33329247
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
33329209 taaattgcatttttgatcccttaactatttaggtagtat 33329247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 33544825 - 33544863
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||||||||| |||||||    
33544825 taaattgcatttttggtcccttaactatttaagtagtat 33544863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 33548240 - 33548202
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
33548240 taaattgaatttttagtcccttaactatttaggtagtat 33548202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 35132604 - 35132642
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
35132604 taaattgcatttttggtccattaactatttaggtagtat 35132642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 1860868 - 1860835
Alignment:
251 taaattgtatttttggtcccttaactatttaggt 284  Q
    ||||||| ||||||||||||||||||||||||||    
1860868 taaattgcatttttggtcccttaactatttaggt 1860835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Original strand, 11524778 - 11524806
Alignment:
261 ttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||    
11524778 ttttggtcccttaactatttaggtagtat 11524806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 34958827 - 34958873
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
34958827 tttttggctaaattgtatttttggtcccttaactatttaggtagtat 34958873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 46535518 - 46535564
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
46535518 tttttggctaaattgtatttttggtcccttaactatttaggtagtat 46535564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 29864558 - 29864520
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
29864558 taaattgtatttttggtcccttaactatttaggtagtat 29864520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 32384656 - 32384694
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
32384656 taaattgtatttttggtcccttaactatttaggtagtat 32384694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 38866401 - 38866439
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
38866401 taaattgtatttttggtcccttaactatttaggtagtat 38866439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 52914955 - 52914993
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
52914955 taaattgtatttttggtcccttaactatttaggtagtat 52914993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 18862831 - 18862786
Alignment:
244 ttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
18862831 ttttggctaaattgcatttttggtcccttaactatttaggtagtat 18862786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 10014463 - 10014506
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
10014463 ttggctaaattgcatttttggtcccttaactatttaggtagtat 10014506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 10017813 - 10017856
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
10017813 ttggctaaattgcatttttggtcccttaactatttaggtagtat 10017856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 10021604 - 10021647
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
10021604 ttggctaaattgcatttttggtcccttaactatttaggtagtat 10021647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 40067736 - 40067693
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
40067736 ttggctaaattgtatttttgatcccttaactatttaggtagtat 40067693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 1157589 - 1157551
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||| ||||||||||||||||||||||||    
1157589 taaattgtatttttagtcccttaactatttaggtagtat 1157551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 8247129 - 8247095
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    |||||||||||||||||||||||||||||||||||    
8247129 taaattgtatttttggtcccttaactatttaggta 8247095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 9010888 - 9010850
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||||||||||||||||||||||||    
9010888 taaattatatttttggtcccttaactatttaggtagtat 9010850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 21217850 - 21217888
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
21217850 taaattgcatttttggtcccttaactatttaggtagtat 21217888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 32385194 - 32385156
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
32385194 taaattgcatttttggtcccttaactatttaggtagtat 32385156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 44710406 - 44710444
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
44710406 taaattgcatttttggtcccttaactatttaggtagtat 44710444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 45911957 - 45911919
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||| ||||||||||||||||||    
45911957 taaattgtatttttggtcccctaactatttaggtagtat 45911919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 46200487 - 46200525
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
46200487 taaattgcatttttggtcccttaactatttaggtagtat 46200525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 46535905 - 46535867
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||| ||||||||||||||||||||    
46535905 taaattgtatttttggtcacttaactatttaggtagtat 46535867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 46621310 - 46621272
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
46621310 taaattgcatttttggtcccttaactatttaggtagtat 46621272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 54136094 - 54136132
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
54136094 taaattgcatttttggtcccttaactatttaggtagtat 54136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 33625868 - 33625905
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||||||||||    
33625868 aaattgcatttttggtcccttaactatttaggtagtat 33625905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 33882331 - 33882294
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||||||||||    
33882331 aaattgcatttttggtcccttaactatttaggtagtat 33882294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 46620931 - 46620968
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||||||||||    
46620931 aaattgcatttttggtcccttaactatttaggtagtat 46620968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 33626253 - 33626209
Alignment:
245 tttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||    
33626253 tttggctaaatttcatttttggtcccttaactatttaggtagtat 33626209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 282
Target Start/End: Complemental strand, 54191967 - 54191936
Alignment:
251 taaattgtatttttggtcccttaactatttag 282  Q
    ||||||||||||||||||||||||||||||||    
54191967 taaattgtatttttggtcccttaactatttag 54191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 1205381 - 1205419
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| | |||||||||||||||||||||||||||||    
1205381 taaattgcacttttggtcccttaactatttaggtagtat 1205419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 1205760 - 1205722
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||||||||||| |||||    
1205760 taaattgcatttttggtcccttaactatttaggcagtat 1205722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 8751290 - 8751328
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
8751290 taaattgcatttttggtcctttaactatttaggtagtat 8751328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 9010508 - 9010546
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||| ||||||||||||||    
9010508 taaattgcatttttggtcccttaattatttaggtagtat 9010546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 9657670 - 9657700
Alignment:
251 taaattgtatttttggtcccttaactattta 281  Q
    |||||||||||||||||||||||||||||||    
9657670 taaattgtatttttggtcccttaactattta 9657700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Complemental strand, 11102358 - 11102328
Alignment:
251 taaattgtatttttggtcccttaactattta 281  Q
    |||||||||||||||||||||||||||||||    
11102358 taaattgtatttttggtcccttaactattta 11102328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 11242839 - 11242809
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
11242839 atttttggtcccttaactatttaggtagtat 11242809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 21218230 - 21218192
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
21218230 taaattgcatttttgatcccttaactatttaggtagtat 21218192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 25593474 - 25593436
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||| |||||||||||||||||| |||||    
25593474 taaattgtattttttgtcccttaactatttagggagtat 25593436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 29970196 - 29970234
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||| ||||||||||||||||||    
29970196 taaattgcatttttggtcccataactatttaggtagtat 29970234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 37515836 - 37515798
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||| ||||||||||||||||||||||||    
37515836 taaattttatttttagtcccttaactatttaggtagtat 37515798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 38866783 - 38866745
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||| | |||||||||||||||||||||    
38866783 taaattgtatttttgattccttaactatttaggtagtat 38866745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 40067351 - 40067385
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    |||||||||||||| ||||||||||||||||||||    
40067351 taaattgtattttttgtcccttaactatttaggta 40067385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 43969557 - 43969595
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||| |||||| |||||||    
43969557 taaattgtatttttggtcccttaattatttatgtagtat 43969595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 44169982 - 44170012
Alignment:
251 taaattgtatttttggtcccttaactattta 281  Q
    |||||||||||||||||||||||||||||||    
44169982 taaattgtatttttggtcccttaactattta 44170012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 45683500 - 45683466
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||||||||||||| |||||||||||||||||    
45683500 taaattgtatttttggttccttaactatttaggta 45683466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 48209959 - 48209989
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
48209959 atttttggtcccttaactatttaggtagtat 48209989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 44433006 - 44432969
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||| ||||||    
44433006 aaattgcatttttggtcccttaactatttagatagtat 44432969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 46200868 - 46200831
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagta 288  Q
    ||||||| |||||||||| |||||||||||||||||||    
46200868 taaattgcatttttggtctcttaactatttaggtagta 46200831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 20908902 - 20908856
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
20908902 tttttggctaaattgtatttttggtcccttaactatttaggtagtat 20908856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 18565392 - 18565348
Alignment:
245 tttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
18565392 tttggataaattgcatttttggtcccttaactatttaggtagtat 18565348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 39912629 - 39912668
Alignment:
250 ataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||||||||||||    
39912629 ataaattgtatttttggtcccttaactatttaggtagtat 39912668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 4104542 - 4104504
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
4104542 taaattgtatttttggtcccttaactatttaggtagtat 4104504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 16261253 - 16261215
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
16261253 taaattgtatttttggtcccttaactatttaggtagtat 16261215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 16655989 - 16655951
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
16655989 taaattgtatttttggtcccttaactatttaggtagtat 16655951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 27132514 - 27132552
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
27132514 taaattgtatttttggtcccttaactatttaggtagtat 27132552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 41377745 - 41377699
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
41377745 tttttggctaaattgcatttttggtcccttaactatttaggtagtat 41377699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 4104155 - 4104200
Alignment:
244 ttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
4104155 ttttggctaaattgcatttttggtcccttaactatttaggtagtat 4104200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 16655610 - 16655647
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||||||||||    
16655610 aaattgtatttttggtcccttaactatttaggtagtat 16655647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 34820662 - 34820626
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagt 287  Q
    |||||||||||||||||||||||||||||||||||||    
34820662 taaattgtatttttggtcccttaactatttaggtagt 34820626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 4121151 - 4121108
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
4121151 ttggttaaattgcatttttggtcccttaactatttaggtagtat 4121108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 12303788 - 12303826
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
12303788 taaattgcatttttggtcccttaactatttaggtagtat 12303826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 13354560 - 13354522
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||| |||||||||||||||||||||||||||||    
13354560 taaattgtaattttggtcccttaactatttaggtagtat 13354522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 16736104 - 16736142
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
16736104 taaattgcatttttggtcccttaactatttaggtagtat 16736142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 17856572 - 17856534
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
17856572 taaattgcatttttggtcccttaactatttaggtagtat 17856534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 20908514 - 20908552
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||| ||||||||||||||    
20908514 taaattgtatttttggtcccttaattatttaggtagtat 20908552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 25642651 - 25642613
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||| |||||||||||||||||||||||    
25642651 taaattgtatttttgttcccttaactatttaggtagtat 25642613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 28631657 - 28631619
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||| ||||||||    
28631657 taaattgtatttttggtcccttaactatttgggtagtat 28631619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 31450669 - 31450707
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
31450669 taaattgcatttttggtcccttaactatttaggtagtat 31450707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 31451057 - 31451011
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||    
31451057 tttttggctaaattgcatttttgatcccttaactatttaggtagtat 31451011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 32933594 - 32933632
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
32933594 taaattgcatttttggtcccttaactatttaggtagtat 32933632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 32933982 - 32933940
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
32933982 tttttggctaaattgcatttttggtcccttaactatttaggta 32933940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 36211782 - 36211744
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||| ||||||||||||||||||||    
36211782 taaattgtatttttggtctcttaactatttaggtagtat 36211744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 40694198 - 40694236
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||||||||||||||||||||||||    
40694198 taaattatatttttggtcccttaactatttaggtagtat 40694236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 28202856 - 28202897
Alignment:
244 ttttggataaattgtatttttggtcccttaactatttaggta 285  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
28202856 ttttggctaaattgcatttttggtcccttaactatttaggta 28202897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 27132893 - 27132857
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagt 287  Q
    ||||||| |||||||||||||||||||||||||||||    
27132893 taaattgcatttttggtcccttaactatttaggtagt 27132857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 4120767 - 4120805
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
4120767 taaattgcattttttgtcccttaactatttaggtagtat 4120805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 5961672 - 5961710
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||| ||||||||||||||||||||||    
5961672 taaattgcatttttggccccttaactatttaggtagtat 5961710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 12304160 - 12304130
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
12304160 atttttggtcccttaactatttaggtagtat 12304130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 13354180 - 13354218
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||| |||||||||||||||||||||||||    
13354180 taaattgaattttcggtcccttaactatttaggtagtat 13354218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 16260882 - 16260912
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
16260882 atttttggtcccttaactatttaggtagtat 16260912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 20297405 - 20297451
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||  ||||||||||||||||||||| |||||||||    
20297405 tttttggctaaatttcatttttggtcccttaactattcaggtagtat 20297451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 27476369 - 27476407
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||  ||||||||||||||||    
27476369 taaattgtatttttggtccctagactatttaggtagtat 27476407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 27476750 - 27476712
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||| ||||||||||||||||||||    
27476750 taaattgcatttttggtctcttaactatttaggtagtat 27476712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 28203243 - 28203205
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||| ||||    
28203243 taaattgcatttttggtcccttaactatttaggtcgtat 28203205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 34127947 - 34127909
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||| |||||||||||||| |||||||    
34127947 taaattgtatttttggacccttaactatttaagtagtat 34127909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 34484238 - 34484276
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
34484238 taaattgcatttttggtcctttaactatttaggtagtat 34484276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 36442136 - 36442174
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||| |||||| ||||||||||||||||    
36442136 taaattgtatttttgttcccttcactatttaggtagtat 36442174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 36442517 - 36442479
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||||||||||||||||| ||||||    
36442517 taaattatatttttggtcccttaactatttagatagtat 36442479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 37412596 - 37412634
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||| ||||||    
37412596 taaattgcatttttggtcccttaactatttagttagtat 37412634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 37744460 - 37744490
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
37744460 atttttggtcccttaactatttaggtagtat 37744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 38275480 - 38275518
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||| ||||||||||||||| |||||||    
38275480 taaattgtatttttgatcccttaactatttatgtagtat 38275518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 38275840 - 38275802
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
38275840 taaattgcattttttgtcccttaactatttaggtagtat 38275802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 39150208 - 39150170
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
39150208 taaattgcatttttggtcctttaactatttaggtagtat 39150170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 39454454 - 39454492
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||||||||| |||||||    
39454454 taaattgcatttttggtcccttaactatttaagtagtat 39454492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 41377358 - 41377395
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||| |||||||||||||||||||    
41377358 taaattgtatttttggtcc-ttaactatttaggtagtat 41377395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 43183966 - 43183928
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||| ||||||||||||||    
43183966 taaattgcatttttggtcccttaattatttaggtagtat 43183928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 44610865 - 44610899
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||| |||||||||||||||||||||||||||    
44610865 taaattgcatttttggtcccttaactatttaggta 44610899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 34127570 - 34127607
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||| ||||||    
34127570 aaattgcatttttggtcccttaactatttagatagtat 34127607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 34820283 - 34820320
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||||||||||||||| |||||||    
34820283 aaattgcatttttggtcccttaactatttaagtagtat 34820320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 10833416 - 10833380
Alignment:
253 aattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||||||||||| |||||||||||||||    
10833416 aattgcatttttggtcccttagctatttaggtagtat 10833380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 25642273 - 25642309
Alignment:
253 aattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||| |||||||||||||||| |||||||    
25642273 aattgtatttttagtcccttaactatttaagtagtat 25642309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 45389134 - 45389170
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagt 287  Q
    ||||||| ||||||||||||| |||||||||||||||    
45389134 taaattgcatttttggtccctgaactatttaggtagt 45389170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 14353433 - 14353392
Alignment:
248 ggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||||||||||||||    
14353433 ggataaattgtatttttggtcccttaactatttaggtagtat 14353392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 2829410 - 2829448
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
2829410 taaattgtatttttggtcccttaactatttaggtagtat 2829448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 8846071 - 8846117
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
8846071 tttttggctaaattgcatttttggtcccttaactatttaggtagtat 8846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 41998197 - 41998159
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
41998197 taaattgtatttttggtcccttaactatttaggtagtat 41998159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 44069506 - 44069468
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
44069506 taaattgtatttttggtcccttaactatttaggtagtat 44069468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 54081667 - 54081629
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
54081667 taaattgtatttttggtcccttaactatttaggtagtat 54081629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 49222040 - 49222077
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||||||||||    
49222040 aaattgtatttttggtcccttaactatttaggtagtat 49222077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 8846464 - 8846421
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
8846464 ttggctaaattgcatttttggtcccttaactatttaggtagtat 8846421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 44069121 - 44069164
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
44069121 ttggctaaattgcatttttggtcccttaactatttaggtagtat 44069164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 4846979 - 4846941
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
4846979 taaattgcatttttggtcccttaactatttaggtagtat 4846941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 10756721 - 10756759
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||| |||||||||||||||    
10756721 taaattgtatttttggtcccttagctatttaggtagtat 10756759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 12123093 - 12123131
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
12123093 taaattgcatttttggtcccttaactatttaggtagtat 12123131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 17274159 - 17274121
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||| |||||||||||||||||||    
17274159 taaattgtatttttggtcctttaactatttaggtagtat 17274121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 21169669 - 21169707
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||| ||||||||||||||||||||    
21169669 taaattgtatttttggtctcttaactatttaggtagtat 21169707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 34521640 - 34521602
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
34521640 taaattgcatttttggtcccttaactatttaggtagtat 34521602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 35580332 - 35580294
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
35580332 taaattgcatttttggtcccttaactatttaggtagtat 35580294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 40410715 - 40410753
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
40410715 taaattgcatttttggtcccttaactatttaggtagtat 40410753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 43527018 - 43527064
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||    
43527018 tttttggctaaattgcatttttgatcccttaactatttaggtagtat 43527064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 45171071 - 45171109
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||| ||||||||||||||||||||||||||    
45171071 taaattgtatttctggtcccttaactatttaggtagtat 45171109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 45871700 - 45871738
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
45871700 taaattgcatttttggtcccttaactatttaggtagtat 45871738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 54081287 - 54081325
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||||| |||||    
54081287 taaattgtatttttggtcccttaactatttaggcagtat 54081325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 54107672 - 54107710
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
54107672 taaattgcatttttggtcccttaactatttaggtagtat 54107710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 22354946 - 22354983
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||| ||||||||||||||||||||||||    
22354946 aaattgtatttttagtcccttaactatttaggtagtat 22354983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 35753408 - 35753444
Alignment:
253 aattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| |||||||||||||||||||||||||||||||    
35753408 aattgcatttttggtcccttaactatttaggtagtat 35753444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 52609758 - 52609711
Alignment:
238 atttgtttttggataaattgtatttttggtcccttaactatttaggta 285  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||||||    
52609758 atttatttttggctaaattccatttttggtcccttaactatttaggta 52609711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 7274656 - 7274694
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||| ||||||||||||||    
7274656 taaattgcatttttggtcccttaaatatttaggtagtat 7274694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 9028202 - 9028232
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
9028202 atttttggtcccttaactatttaggtagtat 9028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 12123454 - 12123424
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
12123454 atttttggtcccttaactatttaggtagtat 12123424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 15862558 - 15862520
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
15862558 taaattgcattttttgtcccttaactatttaggtagtat 15862520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 26332322 - 26332360
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||| ||||||||||||||||||    
26332322 taaattgcatttttggtcccctaactatttaggtagtat 26332360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 27940283 - 27940313
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
27940283 atttttggtcccttaactatttaggtagtat 27940313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 28691117 - 28691155
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||| ||||||||| ||||    
28691117 taaattgtatttttggtcccttaattatttaggtggtat 28691155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 28691496 - 28691458
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||| ||||||||| ||||||||||||||    
28691496 taaattgtattttttgtcccttaattatttaggtagtat 28691458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 31513866 - 31513904
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
31513866 taaattgcatttttggtccattaactatttaggtagtat 31513904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 31514245 - 31514207
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
31514245 taaattgcatttttagtcccttaactatttaggtagtat 31514207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 33812735 - 33812765
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
33812735 atttttggtcccttaactatttaggtagtat 33812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 34521269 - 34521307
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||| ||||||||||||||    
34521269 taaattgcatttttggtcccttaattatttaggtagtat 34521307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 34629985 - 34630023
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||| |||||||    
34629985 taaattatatttttggtcccttaactatttaagtagtat 34630023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 41208404 - 41208442
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||||||||| |||||||    
41208404 taaattgcatttttggtcccttaactatttaagtagtat 41208442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 41208783 - 41208745
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
41208783 taaattgcatttttagtcccttaactatttaggtagtat 41208745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 41997830 - 41997860
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
41997830 atttttggtcccttaactatttaggtagtat 41997860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 45171450 - 45171412
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
45171450 taaattgcatttttagtcccttaactatttaggtagtat 45171412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 45872064 - 45872034
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
45872064 atttttggtcccttaactatttaggtagtat 45872034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 46766997 - 46766959
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||| | ||||||    
46766997 taaattgtatttttggtcccttaactattttgctagtat 46766959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 51170764 - 51170726
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
51170764 taaattgcatttttgatcccttaactatttaggtagtat 51170726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 7275024 - 7274987
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||| |||||||||||||||||||    
7275024 aaattgcatttttggtccgttaactatttaggtagtat 7274987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 289
Target Start/End: Complemental strand, 7743139 - 7743110
Alignment:
260 tttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||    
7743139 tttttggtcccttaactatttaggtagtat 7743110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 43899107 - 43899148
Alignment:
244 ttttggataaattgtatttttggtcccttaactatttaggta 285  Q
    |||||| ||||||| ||||||||||| |||||||||||||||    
43899107 ttttggctaaattgcatttttggtcctttaactatttaggta 43899148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 53841407 - 53841371
Alignment:
253 aattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| |||||||||||||||||||||||| ||||||    
53841407 aattgcatttttggtcccttaactatttagctagtat 53841371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 13932 - 13886
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||    
13932 tttttggttaaattgtatttttggtcccctaactatttaggtagtat 13886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 11679093 - 11679047
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||    
11679093 tttttggctaaattgtatttttggtcccttaactatttaagtagtat 11679047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 23472596 - 23472634
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
23472596 taaattgtatttttggtcccttaactatttaggtagtat 23472634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 39118013 - 39118051
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
39118013 taaattgtatttttggtcccttaactatttaggtagtat 39118051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 2357438 - 2357400
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||| ||||||||||||||||||||||||||    
2357438 taaattgtatttctggtcccttaactatttaggtagtat 2357400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 8769285 - 8769323
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
8769285 taaattgcatttttggtcccttaactatttaggtagtat 8769323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 9034698 - 9034660
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||| |||||||||||||||||||    
9034698 taaattgtatttttggtcctttaactatttaggtagtat 9034660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 10625467 - 10625429
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
10625467 taaattgcatttttggtcccttaactatttaggtagtat 10625429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 23472945 - 23472903
Alignment:
245 tttggataaattgtatttttggtcccttaactatttaggtagt 287  Q
    ||||| ||||||| |||||||||||||||||||||||||||||    
23472945 tttggctaaattgcatttttggtcccttaactatttaggtagt 23472903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 31716004 - 31715966
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
31716004 taaattgcatttttggtcccttaactatttaggtagtat 31715966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 32706735 - 32706773
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
32706735 taaattgcatttttggtcccttaactatttaggtagtat 32706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 35085742 - 35085780
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
35085742 taaattgcatttttggtcccttaactatttaggtagtat 35085780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 47250929 - 47250891
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
47250929 taaattgcatttttggtcccttaactatttaggtagtat 47250891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 286
Target Start/End: Complemental strand, 21522599 - 21522564
Alignment:
251 taaattgtatttttggtcccttaactatttaggtag 286  Q
    |||||||| |||||||||||||||||||||||||||    
21522599 taaattgtgtttttggtcccttaactatttaggtag 21522564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 258 - 289
Target Start/End: Complemental strand, 48704184 - 48704153
Alignment:
258 tatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||||    
48704184 tatttttggtcccttaactatttaggtagtat 48704153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 8769665 - 8769627
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
8769665 taaattgcatttttagtcccttaactatttaggtagtat 8769627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 289
Target Start/End: Complemental strand, 9231056 - 9231022
Alignment:
255 ttgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||| |||||||||||||    
9231056 ttgtatttttggtcccttaacgatttaggtagtat 9231022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 10625117 - 10625147
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
10625117 atttttggtcccttaactatttaggtagtat 10625147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 18731022 - 18731060
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||| ||||||    
18731022 taaattgcatttttggtcccttaactatttagatagtat 18731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 31715636 - 31715674
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||| ||| ||||||||||||||||||||    
31715636 taaattgtattttttgtctcttaactatttaggtagtat 31715674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 34568586 - 34568624
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||| |||| |||||||||||||||||||    
34568586 taaattgtattttttgtcctttaactatttaggtagtat 34568624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 35086123 - 35086085
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
35086123 taaattgcatttttggtcctttaactatttaggtagtat 35086085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 43726625 - 43726587
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||| ||||    
43726625 taaattgcatttttggtcccttaactatttaggtggtat 43726587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 44486315 - 44486277
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
44486315 taaattgcatttttggtcctttaactatttaggtagtat 44486277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 47251279 - 47251241
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||    
47251279 taaattgcattttttgtcccttaactatttaggtagtat 47251241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 47305130 - 47305160
Alignment:
251 taaattgtatttttggtcccttaactattta 281  Q
    |||||||||||||||||||||||||||||||    
47305130 taaattgtatttttggtcccttaactattta 47305160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 43726247 - 43726283
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagt 287  Q
    |||||||||||||||||||||||| |||||| |||||    
43726247 taaattgtatttttggtcccttaattatttaagtagt 43726283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 10656097 - 10656135
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
10656097 taaattgtatttttggtcccttaactatttaggtagtat 10656135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 15670534 - 15670496
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
15670534 taaattgtatttttggtcccttaactatttaggtagtat 15670496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 42710733 - 42710695
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
42710733 taaattgtatttttggtcccttaactatttaggtagtat 42710695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 40589049 - 40589093
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagt 287  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||    
40589049 tttttggctaaattgcatttttggtcccttaactatttaggtagt 40589093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 40589652 - 40589696
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagt 287  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||    
40589652 tttttggctaaattgcatttttggtcccttaactatttaggtagt 40589696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 3878484 - 3878522
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||| ||||||||||||||    
3878484 taaattgtatttttggtcccttaattatttaggtagtat 3878522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 5088511 - 5088473
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||| ||||||||||||||||||||    
5088511 taaattgtatttttggtctcttaactatttaggtagtat 5088473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 5460329 - 5460291
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||| ||||||    
5460329 taaattgtatttttggtcccttaactatttagatagtat 5460291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 5624382 - 5624420
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||| ||||||||||||||||||||    
5624382 taaattgtatttttggtctcttaactatttaggtagtat 5624420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 7399080 - 7399118
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
7399080 taaattgcatttttggtcccttaactatttaggtagtat 7399118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 8418567 - 8418529
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
8418567 taaattgcatttttggtcccttaactatttaggtagtat 8418529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 15476269 - 15476307
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||||||||||||||||||||||||    
15476269 taaattatatttttggtcccttaactatttaggtagtat 15476307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 19204947 - 19204985
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
19204947 taaattgcatttttggtcccttaactatttaggtagtat 19204985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 25923121 - 25923159
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||| |||||||||||||||||||||||    
25923121 taaattgtatttttgatcccttaactatttaggtagtat 25923159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 26288994 - 26289032
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||| ||||    
26288994 taaattgtatttttggtcccttaactatttaggttgtat 26289032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 289
Target Start/End: Original strand, 26289027 - 26289061
Alignment:
255 ttgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||    
26289027 ttgtatttttggtcccttaactatttaggtagtat 26289061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 29023940 - 29023978
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
29023940 taaattgcatttttggtcccttaactatttaggtagtat 29023978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 35263497 - 35263535
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
35263497 taaattgcatttttggtcccttaactatttaggtagtat 35263535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 36751905 - 36751943
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||| |||||||||||||||||||    
36751905 taaattgtatttttggtcctttaactatttaggtagtat 36751943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 5087811 - 5087848
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||||||||||    
5087811 aaattgaatttttggtcccttaactatttaggtagtat 5087848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 28392160 - 28392115
Alignment:
244 ttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||    
28392160 ttttggctaaattctatttttggtctcttaactatttaggtagtat 28392115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 39706433 - 39706396
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||||||||||||||||||||||||||||    
39706433 aaattgcatttttggtcccttaactatttaggtagtat 39706396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 9693303 - 9693263
Alignment:
249 gataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
9693303 gataaattgcatttttggtcccttaacgatttaggtagtat 9693263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 282
Target Start/End: Original strand, 5460191 - 5460222
Alignment:
251 taaattgtatttttggtcccttaactatttag 282  Q
    ||||||||||||||||||||||||||||||||    
5460191 taaattgtatttttggtcccttaactatttag 5460222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 18514282 - 18514329
Alignment:
242 gtttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| || ||||||| ||||||||||||||||||||||||| |||||    
18514282 gttttaggctaaattgcatttttggtcccttaactatttaggaagtat 18514329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 3879395 - 3879357
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||||||||| |||||||    
3879395 taaattgcatttttggtcccttaactatttaagtagtat 3879357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 9692922 - 9692959
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||| ||||||||||||||||||    
9692922 taaattgtatttttggtccc-taactatttaggtagtat 9692959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 10656477 - 10656439
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
10656477 taaattgcatttttgatcccttaactatttaggtagtat 10656439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 12593459 - 12593497
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
12593459 taaattgcatttttgatcccttaactatttaggtagtat 12593497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 14051892 - 14051926
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    |||||||||||||||||| ||||||||||||||||    
14051892 taaattgtatttttggtctcttaactatttaggta 14051926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 17861034 - 17861076
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||| |||||| |||||||||||| |||||||||||||||    
17861034 tttttggctaaattatatttttggtcctttaactatttaggta 17861076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 19205326 - 19205288
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
19205326 taaattgcatttttgatcccttaactatttaggtagtat 19205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 19615425 - 19615463
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||| ||||||||||||||||    
19615425 taaattgcatttttggtcccttgactatttaggtagtat 19615463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 21750813 - 21750851
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||  ||||||||||||||||||||||||||||||    
21750813 taaattgcctttttggtcccttaactatttaggtagtat 21750851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 31909313 - 31909275
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||| ||||||||||||    
31909313 taaattgcatttttggtcccttaactgtttaggtagtat 31909275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 33699278 - 33699316
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||| ||||||||||||||||||||||||||    
33699278 taaattgcatttatggtcccttaactatttaggtagtat 33699316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 35263877 - 35263839
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||| ||||||||||||||    
35263877 taaattgcatttttggtcccttaattatttaggtagtat 35263839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 36752284 - 36752246
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||||||||| |||||||    
36752284 taaattgcatttttggtcccttaactatttatgtagtat 36752246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 38416517 - 38416479
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||| ||||| ||||||||||||||    
38416517 taaattgtatttttggtctcttaattatttaggtagtat 38416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 40589437 - 40589399
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||| |||||||||||||||||||||    
40589437 taaattgcatttttggttccttaactatttaggtagtat 40589399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 40590040 - 40590002
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||| |||||||||||||||||||||    
40590040 taaattgcatttttggttccttaactatttaggtagtat 40590002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 12695068 - 12695031
Alignment:
252 aaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||| ||||||||||||||||||||||||    
12695068 aaattgcatttttagtcccttaactatttaggtagtat 12695031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 289
Target Start/End: Original strand, 31656370 - 31656399
Alignment:
260 tttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||||||||||||||||||    
31656370 tttttggtcccttaactatttaggtagtat 31656399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 289
Target Start/End: Complemental strand, 17736620 - 17736592
Alignment:
261 ttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||    
17736620 ttttggtcccttaactatttaggtagtat 17736592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 28391773 - 28391809
Alignment:
253 aattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||||||||||||||||||||| |||||    
28391773 aattgcatttttggtcccttaactatttaggcagtat 28391809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 24590616 - 24590570
Alignment:
243 tttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||    
24590616 tttttggctaaattatatttttggtcccttaactatttaggtagtat 24590570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 50118350 - 50118388
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||||||||    
50118350 taaattgtatttttggtcccttaactatttaggtagtat 50118388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 19986508 - 19986467
Alignment:
248 ggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||| |||||||||||||||||||||||||||||||    
19986508 ggataaattgcatttttggtcccttaactatttaggtagtat 19986467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 51691871 - 51691915
Alignment:
245 tttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||    
51691871 tttggctaaattgcatttttggtcccttaactatttaggtagtat 51691915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 5117996 - 5118030
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    |||||||||||||||||||||||||||||||||||    
5117996 taaattgtatttttggtcccttaactatttaggta 5118030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 9881555 - 9881593
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
9881555 taaattgcatttttggtcccttaactatttaggtagtat 9881593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 14118533 - 14118571
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
14118533 taaattgcatttttggtcccttaactatttaggtagtat 14118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 16268072 - 16268034
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
16268072 taaattgcatttttggtcccttaactatttaggtagtat 16268034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 23281393 - 23281355
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
23281393 taaattgcatttttggtcccttaactatttaggtagtat 23281355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 25088019 - 25088057
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
25088019 taaattgcatttttggtcccttaactatttaggtagtat 25088057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 25088398 - 25088360
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||||||||||||||||||||||||    
25088398 taaattatatttttggtcccttaactatttaggtagtat 25088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 28112724 - 28112762
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
28112724 taaattgcatttttggtcccttaactatttaggtagtat 28112762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 29256835 - 29256873
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| ||||||||||||||||||||||||||||||||    
29256835 taaattatatttttggtcccttaactatttaggtagtat 29256873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 30293395 - 30293357
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
30293395 taaattgcatttttggtcccttaactatttaggtagtat 30293357  T

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Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 33753228 - 33753266
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
33753228 taaattgcatttttggtcccttaactatttaggtagtat 33753266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 34028724 - 34028762
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
34028724 taaattgcatttttggtcccttaactatttaggtagtat 34028762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 34029104 - 34029066
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
34029104 taaattgcatttttggtcccttaactatttaggtagtat 34029066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 34279624 - 34279586
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
34279624 taaattgcatttttggtcccttaactatttaggtagtat 34279586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 45305792 - 45305754
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
45305792 taaattgcatttttggtcccttaactatttaggtagtat 45305754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 50921063 - 50921101
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
50921063 taaattgcatttttggtcccttaactatttaggtagtat 50921101  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 22584742 - 22584697
Alignment:
244 ttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| |||||| |||||||||||||||||||| |||||||||||    
22584742 ttttggctaaattatatttttggtcccttaactaattaggtagtat 22584697  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 11395043 - 11395007
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagt 287  Q
    ||||||| |||||||||||||||||||||||||||||    
11395043 taaattgcatttttggtcccttaactatttaggtagt 11395007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 289
Target Start/End: Complemental strand, 51810515 - 51810483
Alignment:
257 gtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||||    
51810515 gtatttttggtcccttaactatttaggtagtat 51810483  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 10923364 - 10923403
Alignment:
250 ataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
10923364 ataaattatatttttggtcccttaattatttaggtagtat 10923403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 13944899 - 13944856
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||||||||||||||||||||  |||||||||||||    
13944899 ttggctaaattgtatttttggtcccttaatcatttaggtagtat 13944856  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 18794089 - 18794038
Alignment:
238 atttgtttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| |||| || ||||||| ||||||||||||||||||||||| |||||||    
18794089 atttattttaggctaaattgcatttttggtcccttaactatttaagtagtat 18794038  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 19886302 - 19886259
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||    
19886302 ttggttaaattgtatttttggtcctttaattatttaggtagtat 19886259  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 254 - 289
Target Start/End: Complemental strand, 50574897 - 50574862
Alignment:
254 attgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| |||||||||||||||||||||||||||||||    
50574897 attgcatttttggtcccttaactatttaggtagtat 50574862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 1832047 - 1832009
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||| || |||||||    
1832047 taaattgtatttttggtcccttaactatatatgtagtat 1832009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 4045102 - 4045140
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||| | ||||||||||||||||||||||    
4045102 taaattgtatttttagccccttaactatttaggtagtat 4045140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 10654404 - 10654374
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
10654404 atttttggtcccttaactatttaggtagtat 10654374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 11787743 - 11787781
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
11787743 taaattgaatttttgatcccttaactatttaggtagtat 11787781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 14775748 - 14775786
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||| |||||||| ||||||||||||||    
14775748 taaattgtatttttgttcccttaattatttaggtagtat 14775786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 14776118 - 14776080
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||| ||||||||||||||||||||    
14776118 taaattgcatttttggtcacttaactatttaggtagtat 14776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 16267718 - 16267752
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||| |||||||||||||||||||||||||||    
16267718 taaattgcatttttggtcccttaactatttaggta 16267752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 28970422 - 28970460
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
28970422 taaattgcatttttggtcctttaactatttaggtagtat 28970460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 30293016 - 30293054
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||||| |||||||||||||||||||    
30293016 taaattgcatttttggtccattaactatttaggtagtat 30293054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 30611604 - 30611566
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||| |||||||||||||||||| ||||    
30611604 taaattgtatttttgatcccttaactatttaggttgtat 30611566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 31125939 - 31125977
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
31125939 taaattgcatttttgatcccttaactatttaggtagtat 31125977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 35986235 - 35986273
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||| |||||||||||||||||||||||    
35986235 taaattgcatttttgttcccttaactatttaggtagtat 35986273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 36077274 - 36077312
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||| ||||||||||||||    
36077274 taaattgcatttttggtcccttaattatttaggtagtat 36077312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 36884725 - 36884763
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||||||||||| ||| |||||||||||||||||||    
36884725 taaattgtatttttgttcctttaactatttaggtagtat 36884763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 37199304 - 37199266
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| ||||||||| |||||||||||||||||||||    
37199304 taaattgcatttttggttccttaactatttaggtagtat 37199266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 50921466 - 50921436
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
50921466 atttttggtcccttaactatttaggtagtat 50921436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 51692253 - 51692219
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||| |||||||||||||||||||||||||||    
51692253 taaattgcatttttggtcccttaactatttaggta 51692219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 52412609 - 52412639
Alignment:
259 atttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||||||||||    
52412609 atttttggtcccttaactatttaggtagtat 52412639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 10654033 - 10654070
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagta 288  Q
    ||||||| |||||||||||||||| |||||||||||||    
10654033 taaattgcatttttggtcccttaattatttaggtagta 10654070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 34279243 - 34279280
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagta 288  Q
    ||||||| |||||||||| |||||||||||||||||||    
34279243 taaattgcatttttggtctcttaactatttaggtagta 34279280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 36657883 - 36657854
Alignment:
252 aaattgtatttttggtcccttaactattta 281  Q
    ||||||||||||||||||||||||||||||    
36657883 aaattgtatttttggtcccttaactattta 36657854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 32563962 - 32563994
Alignment:
251 taaattgtatttttggtcccttaactatttagg 283  Q
    ||||||| |||||||||||||||||||||||||    
32563962 taaattgcatttttggtcccttaactatttagg 32563994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 11876 - 11832
Alignment:
245 tttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||    
11876 tttggctaaattgcatttttggtcccttaactatttaggtagtat 11832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 40740 - 40697
Alignment:
246 ttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
40740 ttggctaaattgcatttttggtcccttaactatttaggtagtat 40697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 40355 - 40393
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||||||||||||||||||||| ||||||| ||||||    
40355 taaattgtatttttggtcccttaattatttagatagtat 40393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 4701 - 4663
Alignment:
251 taaattgtatttttggtcccttaactatttaggtagtat 289  Q
    ||||||| |||||||||||||||||||||||||||||||    
4701 taaattgcatttttggtcccttaactatttaggtagtat 4663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 4341 - 4375
Alignment:
251 taaattgtatttttggtcccttaactatttaggta 285  Q
    ||||||| |||||||||||||||||||||||||||    
4341 taaattgcatttttggtcccttaactatttaggta 4375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 93183 - 93221
Alignment:
243 tttttggataaattgtatttttggtcccttaactattta 281  Q
    ||||||| |||||||||||||||||||||||||||||||    
93183 tttttggctaaattgtatttttggtcccttaactattta 93221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 90801 - 90846
Alignment:
244 ttttggataaattgtatttttggtcccttaactatttaggtagtat 289  Q
    |||||| || |||| |||||| ||||||||||||||||||||||||    
90801 ttttggctacattgcatttttagtcccttaactatttaggtagtat 90846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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