View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5876_low_85 (Length: 235)
Name: NF5876_low_85
Description: NF5876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5876_low_85 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 38944704 - 38944484
Alignment:
| Q |
1 |
atctccaacttatagttaactagctagctagatagacatgtgcacgcacgcatgtcaaactcaatcctatgattcatatcaaacattcaatgtaagaaca |
100 |
Q |
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| T |
38944704 |
atctccaacttatagttaactagctagctagatagacatgtgcacgcacgcatgtcaaactcaatcctatgattcatatcaaacattcaatgtaagaaca |
38944605 |
T |
|
| Q |
101 |
gtaatttgaaataaagttgaaagtgaatcgggtgcatatatatctaaatattacaagacagtaatgaccacctcatgtgcatgaaaatcaagaaaatagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38944604 |
gtaatttgaaataaagttgaaagtgaatcgggtgcatatatatctaaatattacaagacagtaatgaccacctcatgtgcatgaaaatcaagaaaatagc |
38944505 |
T |
|
| Q |
201 |
atatatgcaagataacaatga |
221 |
Q |
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||||||||||||||||||||| |
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| T |
38944504 |
atatatgcaagataacaatga |
38944484 |
T |
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