View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5877_low_1 (Length: 583)

Name: NF5877_low_1
Description: NF5877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5877_low_1
NF5877_low_1
[»] chr8 (7 HSPs)
chr8 (349-566)||(35945780-35946003)
chr8 (225-322)||(35946045-35946142)
chr8 (9-79)||(35946248-35946318)
chr8 (183-241)||(39116872-39116930)
chr8 (187-241)||(39117363-39117417)
chr8 (183-241)||(7888968-7889026)
chr8 (183-241)||(10635439-10635497)
[»] chr7 (12 HSPs)
chr7 (388-529)||(12132650-12132791)
chr7 (399-528)||(12133021-12133149)
chr7 (183-241)||(42665394-42665452)
chr7 (183-239)||(39140487-39140543)
chr7 (183-241)||(3312039-3312097)
chr7 (183-241)||(36965785-36965843)
chr7 (187-241)||(36966194-36966248)
chr7 (183-241)||(42665875-42665933)
chr7 (183-241)||(46293817-46293875)
chr7 (187-241)||(46294308-46294362)
chr7 (182-271)||(3126419-3126507)
chr7 (181-241)||(15309064-15309124)
[»] chr3 (11 HSPs)
chr3 (182-335)||(3192258-3192410)
chr3 (182-329)||(27939293-27939442)
chr3 (183-241)||(2892233-2892291)
chr3 (183-241)||(2892715-2892773)
chr3 (183-241)||(41496375-41496433)
chr3 (183-241)||(41805101-41805159)
chr3 (31-76)||(27939589-27939634)
chr3 (184-241)||(54035819-54035876)
chr3 (32-76)||(3192527-3192571)
chr3 (260-320)||(27940562-27940624)
chr3 (187-241)||(41496867-41496921)
[»] chr4 (9 HSPs)
chr4 (9-77)||(24858462-24858531)
chr4 (183-241)||(11315744-11315802)
chr4 (183-241)||(46263948-46264006)
chr4 (211-244)||(24316931-24316964)
chr4 (185-241)||(46264525-46264581)
chr4 (225-317)||(24858835-24858929)
chr4 (188-241)||(49403647-49403701)
chr4 (185-230)||(5339892-5339937)
chr4 (188-241)||(35323111-35323164)
[»] chr1 (11 HSPs)
chr1 (182-273)||(39093279-39093370)
chr1 (183-241)||(15623719-15623777)
chr1 (183-241)||(28419160-28419218)
chr1 (183-241)||(36087913-36087971)
chr1 (183-241)||(36322616-36322674)
chr1 (183-239)||(9359989-9360045)
chr1 (183-239)||(45216333-45216389)
chr1 (182-241)||(36725721-36725780)
chr1 (183-241)||(28419691-28419749)
chr1 (187-241)||(36096795-36096849)
chr1 (183-241)||(36323103-36323161)
[»] chr2 (6 HSPs)
chr2 (183-241)||(41426418-41426476)
chr2 (183-241)||(16026868-16026926)
chr2 (183-241)||(18129018-18129076)
chr2 (187-241)||(16027347-16027401)
chr2 (183-241)||(41426898-41426956)
chr2 (35-76)||(31443382-31443423)
[»] chr6 (7 HSPs)
chr6 (183-241)||(17408641-17408699)
chr6 (183-241)||(8980481-8980539)
chr6 (187-241)||(8980969-8981023)
chr6 (183-241)||(13219692-13219750)
chr6 (183-241)||(28535782-28535840)
chr6 (185-241)||(17409218-17409274)
chr6 (187-241)||(13219103-13219157)
[»] chr5 (5 HSPs)
chr5 (183-241)||(24115835-24115893)
chr5 (186-241)||(24116328-24116383)
chr5 (183-241)||(25434936-25434994)
chr5 (187-241)||(42833478-42833532)
chr5 (182-241)||(32780293-32780352)
[»] scaffold0025 (1 HSPs)
scaffold0025 (183-241)||(3876-3934)


Alignment Details
Target: chr8 (Bit Score: 162; Significance: 4e-86; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 349 - 566
Target Start/End: Complemental strand, 35946003 - 35945780
Alignment:
Q  349 ggaccaatgacatatttaagt----tacaca---catatatcttcactccaattaagttcttcatgctttcatcgccctaaacaaataacaaaatcgata 441  Q
    |||||||||||||||||||||    ||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |     
T  35946003 ggaccaatgacatatttaagtcagatacacaatacatatatcttcactccaattaagttcttcatgctttcattgccctaaacaagtaacaaaatcggtt 35945904  T
Q  442 tttgcatcaagaacttggttaatctaattatttgattgatttctttattataatagatgcaggagtttcatcagtcaagcaaaagtcagcaaaagctagt 541  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  35945903 tttgcatcaagaacttg-ttaatctaattatttgattgatttctttattataatagatgcaggagtttcatcagtcaagcaagagtcaacaaaagctagt 35945805  T
Q  542 tgtgtttgtgtctgcagatcaagtt 566  Q
    |||||||||||||||||||||||||    
T  35945804 tgtgtttgtgtctgcagatcaagtt 35945780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 35946142 - 35946045
Alignment:
Q  225 aaagtgcaaggactaataatgaattaaatccttagaatattttaatttttaaaattgtcttttagtatgctacatggcgtggattgattggtccacat 322  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35946142 aaagtgcaaggactaataatgaattaaatccttggaatattttaatttttaaaattgtcttttagtgtgctacatggcgtggattgattggtccacat 35946045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 35946318 - 35946248
Alignment:
Q  9 agcagagacatcacattcagagaaaaaagacgatgcaataagattaaagcttaatcttttattaaaaatga 79  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35946318 agcagagacatcacatttagagaaaaaagacgatgcaataagattaaagcttaatcttttattaaaaatga 35946248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 39116930 - 39116872
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  39116930 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 39116872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 39117363 - 39117417
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  39117363 taataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 39117417  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 7889026 - 7888968
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||||| || | |||| ||||||||| |||||||| | ||||||||    
T  7889026 ggactaataccaaagtgcaaggactaatatcaaaaaatgctgaaagtgtagggactaat 7888968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 10635497 - 10635439
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||| |||| || | |||| ||||||||| |||||||||| ||||||||    
T  10635497 ggactaataccaaaatgcatggactaatatcaaaaaatgctgaaagtgcagggactaat 10635439  T

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Target: chr7 (Bit Score: 86; Significance: 8e-41; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 388 - 529
Target Start/End: Original strand, 12132650 - 12132791
Alignment:
Q  388 ctccaattaagttcttcatgctttcatcgccctaaacaaataacaaaatcgatatttgcatcaagaacttggttaatctaattatttgattgatttcttt 487  Q
    |||||||||| |||| ||||||||||| ||||||||||| |||||||||    |||||||||||| | |||| |||||||| ||||||||||||||||||    
T  12132650 ctccaattaatttctacatgctttcattgccctaaacaagtaacaaaatatgcatttgcatcaagtatttgggtaatctaactatttgattgatttcttt 12132749  T
Q  488 attataatagatgcaggagtttcatcagtcaagcaaaagtca 529  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  12132750 attataatagatgcaggagttccatcagtcaagcaagagtca 12132791  T

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Target: chr7; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 399 - 528
Target Start/End: Complemental strand, 12133149 - 12133021
Alignment:
Q  399 ttcttcatgctttcatcgccctaaacaaataacaaaatcgatatttgcatcaagaacttggttaatctaattatttgattgatttctttattataataga 498  Q
    |||||| ||||||||| ||||||||||| |||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  12133149 ttcttcttgctttcattgccctaaacaagtaacaaaatcggcatttgcatcaa-aacttggttaatctaactatttgattgatttctttattatgataga 12133051  T
Q  499 tgcaggagtttcatcagtcaagcaaaagtc 528  Q
    |||||||||| |||||||||||||| ||||    
T  12133050 tgcaggagttccatcagtcaagcaagagtc 12133021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 42665452 - 42665394
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  42665452 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 42665394  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 39140487 - 39140543
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggacta 239  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||    
T  39140487 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggacta 39140543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 3312039 - 3312097
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||| ||||||| | |||| ||||||||| |||||||||| ||||||||    
T  3312039 ggactaataccaaaatgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 3312097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 36965843 - 36965785
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | ||||  |||||||| |||||||||| ||||||||    
T  36965843 ggactaataccaaagtgcagggactaatataaaaaaatgctgaaagtgcagggactaat 36965785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 36966194 - 36966248
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  36966194 taataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 36966248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 42665875 - 42665933
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||| |||| | |||| ||||||||| |||||||||| ||||||||    
T  42665875 ggactaataccaaagtgtagggactaatatcaaaaaatgctgaaagtgcagggactaat 42665933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 46293875 - 46293817
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||  |||||||||| ||||||||    
T  46293875 ggactaataccaaagtgcagggactaatatcaaaaaatactgaaagtgcagggactaat 46293817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 46294308 - 46294362
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  46294308 taataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 46294362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 3126419 - 3126507
Alignment:
Q  182 gggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaataatgaattaaatccttagaatattttaatt 271  Q
    ||||| ||| ||||||||||||  ||||||||| ||| |||||||||||   |||||||||||||||  ||| ||| ||||| |||||||    
T  3126419 gggacaaatgccaaagtgcagga-ccaataacataaagtgttgaaagtggtgggactaataatgaatataatacttggaatactttaatt 3126507  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 15309064 - 15309124
Alignment:
Q  181 tgggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||| |||||||||||||||||   |||| | ||||||| |||||||||| ||||||||    
T  15309064 tgggaccaataccaaagtgcagggattaatatccaaaaatgctgaaagtgcagggactaat 15309124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 335
Target Start/End: Complemental strand, 3192410 - 3192258
Alignment:
Q  182 gggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaataatgaattaaatccttagaatattttaatttttaaaattg 281  Q
    ||||||||||| |||||| ||||  |||||||||||| ||||||||| ||||||||||||||| |||||||| |||  |||||||||||||| |||||||    
T  3192410 gggactaatac-aaagtgtagggatcaataacaaaaagtgttgaaagggcaaggactaataataaattaaatacttgaaatattttaattttgaaaattg 3192312  T
Q  282 tcttttagtatgctacatggcgtggattgattggtccacatggtaaaccgtcag 335  Q
    ||||||||| |||  | ||||||||| ||||| |||||| ||| ||||||||||    
T  3192311 tcttttagtgtgccgcgtggcgtggagtgatttgtccacgtggcaaaccgtcag 3192258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 27939442 - 27939293
Alignment:
Q  182 gggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaataatgaattaaatccttagaatattttaatttttaaaa--t 279  Q
    |||||||||||||||||| |||| ||||||| |||| ||  || ||||||| || ||||||||||||||||| ||| ||||||||| ||| | ||||  |    
T  27939442 gggactaataccaaagtgtagggaccaataagaaaatattatggaagtgcagggtctaataatgaattaaatacttggaatattttcattctaaaaattt 27939343  T
Q  280 tgtcttttagtatgctacatggcgtggattgattggtccacatggtaaac 329  Q
    ||||||||||| ||  || ||||||| | ||||||||||| |||| ||||    
T  27939342 tgtcttttagtgtgtcacgtggcgtgaagtgattggtccatatggcaaac 27939293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 2892291 - 2892233
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  2892291 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 2892233  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 2892715 - 2892773
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  2892715 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 2892773  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 41496433 - 41496375
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| ||||||||| |||||||||    
T  41496433 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgctaggactaat 41496375  T

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Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 41805159 - 41805101
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||||| || | |||| |||||||||||||||||||| ||||||||    
T  41805159 ggactaataccaaagtgcatggactaatatcaaaaaatgttgaaagtgcagggactaat 41805101  T

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Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 27939634 - 27939589
Alignment:
Q  31 aaaaaagacgatgcaataagattaaagcttaatcttttattaaaaa 76  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||    
T  27939634 aaaatagacgatgcaataagattaaagcttaatctttcattaaaaa 27939589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 54035876 - 54035819
Alignment:
Q  184 gactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||||||| | ||||  |||||||| |||||||||| ||||||||    
T  54035876 gactaataccaaagtgcagggactaatataaaaaaatgctgaaagtgcagggactaat 54035819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 3192571 - 3192527
Alignment:
Q  32 aaaaagacgatgcaataagattaaagcttaatcttttattaaaaa 76  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||    
T  3192571 aaaaagacgatgcaataaaattaaaacttaatctttcattaaaaa 3192527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 27940562 - 27940624
Alignment:
Q  260 aatattttaatttttaaaatt--gtcttttagtatgctacatggcgtggattgattggtccac 320  Q
    |||||||||||||| ||||||  |||||||||| ||| || ||||||||| ||||||||||||    
T  27940562 aatattttaattttgaaaattttgtcttttagtgtgccacgtggcgtggaatgattggtccac 27940624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 41496867 - 41496921
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | |||| ||||||||| |||||||||| | ||||||    
T  41496867 taataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcaggaactaat 41496921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 24858462 - 24858531
Alignment:
Q  9 agcagagacatcacattcagagaaaaaagacgatgcaataagatt-aaagcttaatcttttattaaaaat 77  Q
    |||| |||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  24858462 agcaaagacatcacaattagagaaaaaagacgatgcaataagattaaaagcttaatctttcattaaaaat 24858531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 11315802 - 11315744
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  11315802 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 11315744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 46264006 - 46263948
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  46264006 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 46263948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 24316931 - 24316964
Alignment:
Q  211 aacaaaaaatgttgaaagtgcaaggactaataat 244  Q
    ||||||||||||||||||||||||||||||||||    
T  24316931 aacaaaaaatgttgaaagtgcaaggactaataat 24316964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 46264525 - 46264581
Alignment:
Q  185 actaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||| | |||| |||||||||  ||||||||| ||||||||    
T  46264525 actaataccaaagtgcagggactaatatcaaaaaatgcagaaagtgcagggactaat 46264581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 24858835 - 24858929
Alignment:
Q  225 aaagtgcaaggactaataatgaattaaatccttagaatattttaatttttaaaa--ttgtcttttagtatgctacatggcgtggattgattggtc 317  Q
    |||||| | |||||||||||||||||||  |||  |||||||||||| |  |||  |||||||||||| ||| || ||||||||| |||||||||    
T  24858835 aaagtgtagggactaataatgaattaaacacttgaaatattttaattctggaaattttgtcttttagtgtgccacgtggcgtggaatgattggtc 24858929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 49403701 - 49403647
Alignment:
Q  188 aataccaaagtgcagggtccaataacaaaaaa-tgttgaaagtgcaaggactaat 241  Q
    ||||||||||| ||||| |||||| ||||||| | ||||||||||||||||||||    
T  49403701 aataccaaagtacagggaccaatatcaaaaaagtattgaaagtgcaaggactaat 49403647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 5339937 - 5339892
Alignment:
Q  185 actaataccaaagtgcagggtccaataacaaaaaatgttgaaagtg 230  Q
    |||||||||||||||||||| | |||| ||||||||| ||||||||    
T  5339937 actaataccaaagtgcagggactaatatcaaaaaatgctgaaagtg 5339892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 35323164 - 35323111
Alignment:
Q  188 aataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||| | |||| |||||| | ||||||||||| ||||||||    
T  35323164 aataccaaagtgcagggactaatatcaaaaagtattgaaagtgcagggactaat 35323111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 9e-16; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 39093370 - 39093279
Alignment:
Q  182 gggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaataatgaattaaatccttagaatattttaatttt 273  Q
    ||||||||||||| ||||||||| ||||||  |||| ||| |||||||||| ||||||||||| ||| |||| | || ||||||||||||||    
T  39093370 gggactaataccagagtgcagggaccaatattaaaatatgctgaaagtgcagggactaataatcaataaaatacctaaaatattttaatttt 39093279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 15623719 - 15623777
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| |||||||||||||||||||| ||||||||    
T  15623719 ggactaataccaaagtgcagggactaatatcaaaaaatgttgaaagtgcagggactaat 15623777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 28419218 - 28419160
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||||| || | |||| |||||||||||||||||||| ||||||||    
T  28419218 ggactaataccaaagtgcatggactaatatcaaaaaatgttgaaagtgcacggactaat 28419160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 36087971 - 36087913
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  36087971 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcatggactaat 36087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 36322674 - 36322616
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||||| || | |||| |||||||||||||||||||| ||||||||    
T  36322674 ggactaataccaaagtgcatggactaatatcaaaaaatgttgaaagtgcagggactaat 36322616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 9360045 - 9359989
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggacta 239  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||    
T  9360045 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggacta 9359989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 45216333 - 45216389
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggacta 239  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||    
T  45216333 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggacta 45216389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 36725780 - 36725721
Alignment:
Q  182 gggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||| ||||||||||||||||| | ||||  ||||||||||||||||||||| ||||||    
T  36725780 gggaccaataccaaagtgcagggactaatataaaaaaatgttgaaagtgcaagaactaat 36725721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 28419691 - 28419749
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | ||||  |||||||| |||||||||| ||||||||    
T  28419691 ggactaataccaaagtgcagggactaatataaaaaaatgctgaaagtgcagggactaat 28419749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 36096795 - 36096849
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | |||| ||||||||| | |||||||| ||||||||    
T  36096795 taataccaaagtgcagggactaatatcaaaaaatgctaaaagtgcagggactaat 36096849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 36323103 - 36323161
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | ||||  ||||||||  ||||||||| ||||||||    
T  36323103 ggactaataccaaagtgcagggactaatataaaaaaatgcagaaagtgcagggactaat 36323161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 41426476 - 41426418
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| |||||||||||||||||||| ||||||||    
T  41426476 ggactaataccaaagtgcagggactaatatcaaaaaatgttgaaagtgcagggactaat 41426418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 16026926 - 16026868
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  16026926 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 16026868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 18129076 - 18129018
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  18129076 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 18129018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 16027347 - 16027401
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  16027347 taataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 16027401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 41426898 - 41426956
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | ||||  |||| ||| |||||||||| ||||||||    
T  41426898 ggactaataccaaagtgcagggactaatataaaaatatgctgaaagtgcagggactaat 41426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 31443423 - 31443382
Alignment:
Q  35 aagacgatgcaataagattaaagcttaatcttttattaaaaa 76  Q
    |||||||||||||| ||||||||||||||| ||| |||||||    
T  31443423 aagacgatgcaatacgattaaagcttaatccttttttaaaaa 31443382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 17408699 - 17408641
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  17408699 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 17408641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 8980539 - 8980481
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | ||||  |||||||| |||||||||| ||||||||    
T  8980539 ggactaataccaaagtgcagggactaatataaaaaaatgctgaaagtgcagggactaat 8980481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 8980969 - 8981023
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  8980969 taataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 8981023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 13219692 - 13219750
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||| |||| | |||| ||||||||| |||||||||| ||||||||    
T  13219692 ggactaataccaaagtgtagggactaatatcaaaaaatgctgaaagtgcagggactaat 13219750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 28535840 - 28535782
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||| |||||||||||| | ||||  ||||||||||||||||||| ||||||||    
T  28535840 ggactaatatcaaagtgcagggactaatataaaaaaatgttgaaagtgcagggactaat 28535782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 17409218 - 17409274
Alignment:
Q  185 actaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||| | |||| |||||||||  ||||||||| ||||||||    
T  17409218 actaataccaaagtgcagggactaatatcaaaaaatgcagaaagtgcagggactaat 17409274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 13219157 - 13219103
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | ||||  |||||||| |||||||||| ||||||||    
T  13219157 taataccaaagtgcagggactaatataaaaaaatgctgaaagtgcagggactaat 13219103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 24115893 - 24115835
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  24115893 ggactaataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 24115835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 24116328 - 24116383
Alignment:
Q  186 ctaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||| |||||| | |||| |||||||||||||||||||| ||||||||    
T  24116328 ctaataccaaagggcagggactaatatcaaaaaatgttgaaagtgcagggactaat 24116383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 25434936 - 25434994
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||||||||||||||| |||| | |||| ||||||||| |||||||||| ||||||||    
T  25434936 ggactaataccaaagtgtagggactaatatcaaaaaatgctgaaagtgcagggactaat 25434994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 42833532 - 42833478
Alignment:
Q  187 taataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||    
T  42833532 taataccaaagtgcagggactaatatcaaaaaatgctgaaagtgcagggactaat 42833478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 32780352 - 32780293
Alignment:
Q  182 gggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    ||||| ||||||||||||||||| |  |||  ||||||||||||||||||| ||||||||    
T  32780352 gggaccaataccaaagtgcagggactgatataaaaaaatgttgaaagtgcagggactaat 32780293  T

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Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 3934 - 3876
Alignment:
Q  183 ggactaataccaaagtgcagggtccaataacaaaaaatgttgaaagtgcaaggactaat 241  Q
    |||||||||||||||||||||| | ||||  |||||||| |||||||||| ||||||||    
T  3934 ggactaataccaaagtgcagggactaatataaaaaaatgctgaaagtgcagggactaat 3876  T

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