View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5881_high_14 (Length: 224)
Name: NF5881_high_14
Description: NF5881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5881_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 35080035 - 35080247
Alignment:
| Q |
1 |
gccattaatactctttgttcttttttgttgacccgactcaattcacaccagtattgatatgctgtatttttcaaaaaattgccatttcattcaattttca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35080035 |
gccattaatactctttgttcttttttgttgacccgactcaattcacaccagtattgatatgctgtatttttcaaaaaattgccatttcattcaattttca |
35080134 |
T |
|
| Q |
101 |
caaatcacgagatattaatggttgtcatttcctatatatacatatactccgattgatgaatttcttatgtataagatctataaacgtgatcttcaattat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35080135 |
caaatcacgagatattaatggttgtcatttcctatatatacatatactccgattgatgaatttcttatgtataagatctataaacgtgatcttcaattat |
35080234 |
T |
|
| Q |
201 |
cctcgtgagaata |
213 |
Q |
| |
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||||||||||||| |
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| T |
35080235 |
cctcgtgagaata |
35080247 |
T |
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