View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5882-Insertion-3 (Length: 819)

Name: NF5882-Insertion-3
Description: NF5882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5882-Insertion-3
NF5882-Insertion-3
[»] chr4 (65 HSPs)
chr4 (9-533)||(34141105-34141627)
chr4 (9-186)||(34137442-34137618)
chr4 (9-221)||(34133531-34133741)
chr4 (9-142)||(34127258-34127391)
chr4 (307-383)||(16304089-16304165)
chr4 (306-382)||(23809944-23810020)
chr4 (306-382)||(7230275-7230351)
chr4 (306-382)||(12322668-12322744)
chr4 (306-382)||(28435238-28435314)
chr4 (306-382)||(38453260-38453336)
chr4 (306-382)||(50362129-50362205)
chr4 (325-382)||(34247435-34247492)
chr4 (329-382)||(36203231-36203284)
chr4 (317-382)||(39171371-39171436)
chr4 (330-382)||(2186347-2186399)
chr4 (306-382)||(19588149-19588225)
chr4 (331-375)||(22040652-22040696)
chr4 (330-382)||(52270044-52270096)
chr4 (306-377)||(20383488-20383559)
chr4 (307-382)||(26033270-26033345)
chr4 (331-382)||(43374287-43374338)
chr4 (331-382)||(46745185-46745236)
chr4 (330-388)||(19935175-19935233)
chr4 (329-383)||(37193243-37193297)
chr4 (317-383)||(37921740-37921806)
chr4 (329-382)||(9946422-9946475)
chr4 (329-382)||(11949776-11949829)
chr4 (330-379)||(12698595-12698644)
chr4 (329-382)||(14577520-14577573)
chr4 (329-382)||(20799407-20799460)
chr4 (329-382)||(23304029-23304082)
chr4 (329-382)||(24665004-24665057)
chr4 (329-382)||(43722760-43722813)
chr4 (330-382)||(23247612-23247664)
chr4 (330-382)||(43034356-43034408)
chr4 (309-377)||(56204947-56205014)
chr4 (330-382)||(56564997-56565049)
chr4 (329-376)||(897426-897473)
chr4 (329-380)||(6459937-6459988)
chr4 (331-382)||(21052572-21052623)
chr4 (331-382)||(30051882-30051933)
chr4 (331-382)||(35021482-35021533)
chr4 (306-381)||(49041971-49042046)
chr4 (306-364)||(9196226-9196284)
chr4 (306-376)||(11198329-11198399)
chr4 (326-380)||(38812859-38812913)
chr4 (317-379)||(47266150-47266212)
chr4 (329-374)||(2649746-2649791)
chr4 (306-379)||(5924647-5924720)
chr4 (333-382)||(12671765-12671814)
chr4 (333-382)||(16743301-16743350)
chr4 (329-382)||(19479490-19479543)
chr4 (333-382)||(19854560-19854609)
chr4 (306-379)||(21317328-21317401)
chr4 (331-380)||(30380527-30380576)
chr4 (327-376)||(31760247-31760296)
chr4 (315-380)||(33413329-33413394)
chr4 (329-382)||(35287520-35287573)
chr4 (341-382)||(35997994-35998035)
chr4 (329-382)||(47814264-47814317)
chr4 (331-372)||(48251923-48251964)
chr4 (329-382)||(49473640-49473693)
chr4 (330-383)||(52132316-52132369)
chr4 (326-371)||(53190301-53190346)
chr4 (326-379)||(55421579-55421632)
[»] chr2 (53 HSPs)
chr2 (306-379)||(25186232-25186305)
chr2 (326-382)||(6723087-6723143)
chr2 (329-382)||(29734686-29734739)
chr2 (329-382)||(33063981-33064034)
chr2 (307-382)||(44526123-44526198)
chr2 (328-382)||(1861821-1861875)
chr2 (306-371)||(4509543-4509608)
chr2 (333-385)||(10195679-10195731)
chr2 (306-382)||(22571855-22571931)
chr2 (330-382)||(27244652-27244704)
chr2 (333-381)||(34464426-34464474)
chr2 (306-382)||(35820291-35820367)
chr2 (330-378)||(39761437-39761485)
chr2 (331-382)||(3197094-3197145)
chr2 (331-382)||(9383224-9383275)
chr2 (329-384)||(35287677-35287732)
chr2 (330-388)||(4122027-4122085)
chr2 (330-384)||(10332289-10332343)
chr2 (306-380)||(20565065-20565139)
chr2 (326-380)||(25598572-25598626)
chr2 (330-380)||(43117204-43117254)
chr2 (331-380)||(9519729-9519778)
chr2 (329-378)||(12124544-12124593)
chr2 (329-382)||(20455886-20455939)
chr2 (329-382)||(21482532-21482585)
chr2 (329-382)||(27411087-27411140)
chr2 (329-382)||(34977199-34977252)
chr2 (330-382)||(2256966-2257018)
chr2 (334-386)||(4958644-4958696)
chr2 (306-382)||(10735821-10735897)
chr2 (330-382)||(15427687-15427739)
chr2 (331-383)||(19967412-19967464)
chr2 (329-380)||(19976150-19976202)
chr2 (306-382)||(31543007-31543083)
chr2 (330-382)||(36615047-36615099)
chr2 (334-385)||(13490717-13490768)
chr2 (331-382)||(16877119-16877170)
chr2 (331-382)||(16989250-16989301)
chr2 (331-382)||(22523027-22523078)
chr2 (307-382)||(30089044-30089119)
chr2 (307-382)||(30125648-30125723)
chr2 (329-383)||(7537104-7537158)
chr2 (330-376)||(35685075-35685121)
chr2 (329-379)||(42066710-42066760)
chr2 (329-382)||(7206120-7206173)
chr2 (326-379)||(24579678-24579731)
chr2 (329-378)||(24593375-24593424)
chr2 (329-378)||(28202296-28202345)
chr2 (333-378)||(28771581-28771626)
chr2 (332-377)||(37119274-37119319)
chr2 (333-378)||(39068725-39068770)
chr2 (329-370)||(41778957-41778998)
chr2 (329-382)||(42791290-42791343)
[»] chr8 (51 HSPs)
chr8 (307-384)||(8717466-8717543)
chr8 (329-382)||(27718907-27718960)
chr8 (306-382)||(6447184-6447260)
chr8 (328-382)||(14303160-14303214)
chr8 (306-384)||(17704006-17704084)
chr8 (307-377)||(30427731-30427800)
chr8 (331-384)||(26991772-26991825)
chr8 (327-384)||(29652211-29652268)
chr8 (306-382)||(6235541-6235617)
chr8 (331-386)||(12714385-12714440)
chr8 (329-384)||(22948094-22948149)
chr8 (329-380)||(37750012-37750063)
chr8 (328-382)||(7553674-7553728)
chr8 (326-380)||(33482159-33482213)
chr8 (329-382)||(6314336-6314389)
chr8 (329-382)||(11708981-11709034)
chr8 (329-382)||(19163549-19163602)
chr8 (329-382)||(23852906-23852959)
chr8 (329-382)||(37938490-37938543)
chr8 (330-382)||(7996935-7996987)
chr8 (330-382)||(12910820-12910872)
chr8 (306-382)||(13357431-13357507)
chr8 (306-382)||(17898074-17898150)
chr8 (306-382)||(25136834-25136910)
chr8 (306-382)||(27587216-27587292)
chr8 (326-382)||(29499766-29499822)
chr8 (330-382)||(33451363-33451415)
chr8 (330-382)||(39821879-39821931)
chr8 (330-382)||(42200676-42200728)
chr8 (330-381)||(498727-498778)
chr8 (331-382)||(2188541-2188592)
chr8 (328-371)||(31888032-31888075)
chr8 (306-377)||(32051522-32051593)
chr8 (331-382)||(32555249-32555300)
chr8 (307-382)||(44084263-44084337)
chr8 (330-380)||(1877676-1877726)
chr8 (326-384)||(8599513-8599571)
chr8 (329-383)||(42208482-42208536)
chr8 (329-382)||(574379-574432)
chr8 (330-371)||(6038289-6038330)
chr8 (331-384)||(10152449-10152502)
chr8 (333-382)||(13286126-13286175)
chr8 (333-382)||(13575284-13575333)
chr8 (330-382)||(15310317-15310370)
chr8 (330-382)||(15490686-15490739)
chr8 (329-378)||(19778064-19778113)
chr8 (329-382)||(27750917-27750970)
chr8 (331-384)||(28084275-28084328)
chr8 (329-382)||(31085877-31085930)
chr8 (326-383)||(33763809-33763866)
chr8 (330-382)||(34997453-34997506)
[»] chr3 (50 HSPs)
chr3 (306-382)||(18870715-18870791)
chr3 (306-380)||(3755336-3755410)
chr3 (315-385)||(5428435-5428505)
chr3 (331-384)||(20370296-20370349)
chr3 (330-382)||(7827503-7827555)
chr3 (330-382)||(7829891-7829943)
chr3 (330-382)||(10498709-10498761)
chr3 (306-382)||(25340914-25340990)
chr3 (306-382)||(29631181-29631257)
chr3 (331-382)||(21331432-21331483)
chr3 (327-382)||(43345018-43345073)
chr3 (334-384)||(37921016-37921066)
chr3 (306-382)||(334837-334914)
chr3 (317-382)||(16792975-16793040)
chr3 (330-387)||(27397626-27397683)
chr3 (329-382)||(44579631-44579684)
chr3 (334-383)||(51402731-51402780)
chr3 (331-376)||(51505874-51505919)
chr3 (330-382)||(1149083-1149135)
chr3 (330-382)||(4216413-4216465)
chr3 (330-382)||(7824802-7824854)
chr3 (330-378)||(12976616-12976664)
chr3 (330-382)||(21506772-21506824)
chr3 (331-371)||(21549044-21549084)
chr3 (306-382)||(38130949-38131025)
chr3 (330-386)||(43490431-43490487)
chr3 (306-378)||(51882190-51882262)
chr3 (330-382)||(53996294-53996346)
chr3 (331-382)||(16980369-16980420)
chr3 (331-382)||(17507714-17507765)
chr3 (331-382)||(29687077-29687128)
chr3 (331-382)||(53162193-53162244)
chr3 (329-371)||(977954-977996)
chr3 (330-384)||(8139708-8139762)
chr3 (332-382)||(20537877-20537927)
chr3 (328-382)||(33771685-33771739)
chr3 (330-379)||(35347309-35347359)
chr3 (329-382)||(7557547-7557600)
chr3 (329-382)||(11508496-11508549)
chr3 (330-371)||(25441514-25441555)
chr3 (329-378)||(32629079-32629128)
chr3 (306-379)||(32836171-32836244)
chr3 (309-378)||(33745098-33745167)
chr3 (333-382)||(38387967-38388016)
chr3 (331-380)||(39779021-39779070)
chr3 (330-371)||(45096032-45096073)
chr3 (329-382)||(46226090-46226143)
chr3 (329-382)||(48315037-48315090)
chr3 (306-379)||(50037309-50037382)
chr3 (331-376)||(54230114-54230159)
[»] chr1 (58 HSPs)
chr1 (306-377)||(34521180-34521251)
chr1 (332-382)||(44641522-44641572)
chr1 (306-382)||(15854078-15854154)
chr1 (310-382)||(26755611-26755683)
chr1 (329-382)||(7158768-7158821)
chr1 (330-382)||(3693810-3693862)
chr1 (330-382)||(42045386-42045438)
chr1 (329-380)||(563198-563249)
chr1 (327-378)||(45140017-45140068)
chr1 (331-377)||(3393583-3393629)
chr1 (329-382)||(16826349-16826402)
chr1 (329-382)||(25532968-25533021)
chr1 (333-382)||(27449462-27449511)
chr1 (329-382)||(31890762-31890815)
chr1 (329-382)||(36679585-36679638)
chr1 (338-383)||(51127912-51127957)
chr1 (329-382)||(52441524-52441577)
chr1 (306-382)||(1794591-1794667)
chr1 (318-382)||(7732417-7732481)
chr1 (331-379)||(16967209-16967257)
chr1 (326-378)||(17283950-17284002)
chr1 (317-377)||(17917139-17917199)
chr1 (330-382)||(21400037-21400089)
chr1 (330-382)||(29233988-29234040)
chr1 (330-378)||(30937474-30937522)
chr1 (330-382)||(37098495-37098547)
chr1 (306-382)||(44243868-44243944)
chr1 (330-382)||(49183168-49183220)
chr1 (329-377)||(49868011-49868059)
chr1 (329-380)||(3509954-3510005)
chr1 (324-379)||(13794516-13794571)
chr1 (317-380)||(16533034-16533097)
chr1 (331-378)||(24124845-24124892)
chr1 (307-382)||(27172713-27172788)
chr1 (331-386)||(43611415-43611470)
chr1 (331-382)||(48681948-48681999)
chr1 (309-379)||(7574111-7574181)
chr1 (331-377)||(8253739-8253785)
chr1 (337-379)||(9116893-9116935)
chr1 (332-382)||(24324416-24324466)
chr1 (330-382)||(3481555-3481608)
chr1 (329-382)||(3528482-3528535)
chr1 (317-378)||(5907798-5907859)
chr1 (309-346)||(12182881-12182918)
chr1 (329-382)||(17139530-17139583)
chr1 (330-382)||(24752661-24752714)
chr1 (329-382)||(26803464-26803517)
chr1 (333-382)||(34632164-34632213)
chr1 (329-378)||(38448879-38448928)
chr1 (326-379)||(39252267-39252320)
chr1 (331-380)||(41974758-41974807)
chr1 (329-378)||(42888574-42888623)
chr1 (337-382)||(43840346-43840391)
chr1 (329-382)||(45003395-45003448)
chr1 (306-371)||(45190259-45190324)
chr1 (328-381)||(49875611-49875664)
chr1 (326-371)||(50638926-50638971)
chr1 (317-382)||(52592428-52592493)
[»] scaffold0040 (1 HSPs)
scaffold0040 (306-382)||(56779-56854)
[»] chr6 (31 HSPs)
chr6 (306-382)||(18256878-18256954)
chr6 (332-386)||(17382075-17382129)
chr6 (330-382)||(20744133-20744185)
chr6 (307-371)||(33824887-33824951)
chr6 (331-382)||(32053783-32053834)
chr6 (326-380)||(21373416-21373470)
chr6 (331-377)||(24623332-24623378)
chr6 (329-382)||(13496111-13496164)
chr6 (306-387)||(28951389-28951470)
chr6 (306-379)||(30374522-30374595)
chr6 (306-382)||(8138448-8138524)
chr6 (306-378)||(8569708-8569780)
chr6 (326-382)||(21296753-21296809)
chr6 (329-380)||(1918471-1918522)
chr6 (331-382)||(12204364-12204415)
chr6 (327-382)||(12333579-12333634)
chr6 (308-382)||(27928098-27928175)
chr6 (333-379)||(3373398-3373444)
chr6 (316-382)||(9923235-9923301)
chr6 (329-379)||(20720794-20720844)
chr6 (329-379)||(26320576-26320626)
chr6 (329-382)||(655762-655815)
chr6 (329-378)||(4450261-4450310)
chr6 (330-371)||(4455610-4455651)
chr6 (329-382)||(9111042-9111095)
chr6 (329-382)||(9392681-9392734)
chr6 (329-374)||(16204803-16204848)
chr6 (329-382)||(28231438-28231491)
chr6 (331-380)||(32193874-32193923)
chr6 (331-380)||(33938694-33938743)
chr6 (341-382)||(34828301-34828342)
[»] chr5 (39 HSPs)
chr5 (306-382)||(40715939-40716015)
chr5 (317-383)||(16701582-16701648)
chr5 (329-382)||(37932325-37932378)
chr5 (306-382)||(22522791-22522867)
chr5 (330-382)||(40445978-40446030)
chr5 (334-380)||(39610359-39610405)
chr5 (329-382)||(6624771-6624824)
chr5 (317-382)||(15889406-15889471)
chr5 (329-382)||(28207127-28207180)
chr5 (329-382)||(32200460-32200513)
chr5 (330-382)||(6489002-6489054)
chr5 (334-382)||(17861974-17862022)
chr5 (330-382)||(18489090-18489142)
chr5 (330-382)||(33645703-33645755)
chr5 (331-382)||(5015276-5015326)
chr5 (329-380)||(8545002-8545053)
chr5 (331-382)||(24485694-24485745)
chr5 (331-378)||(25604015-25604062)
chr5 (331-382)||(36321509-36321560)
chr5 (331-382)||(42505867-42505918)
chr5 (330-384)||(11017169-11017223)
chr5 (330-380)||(16133079-16133129)
chr5 (306-384)||(20258538-20258616)
chr5 (326-380)||(32622892-32622946)
chr5 (332-382)||(34436846-34436896)
chr5 (316-382)||(35270681-35270747)
chr5 (329-379)||(41650952-41651002)
chr5 (329-382)||(3445260-3445313)
chr5 (329-382)||(4432111-4432164)
chr5 (329-382)||(5485181-5485234)
chr5 (329-382)||(10704344-10704397)
chr5 (335-376)||(18147719-18147760)
chr5 (329-382)||(18589880-18589933)
chr5 (333-382)||(20175720-20175769)
chr5 (337-378)||(22394034-22394075)
chr5 (329-378)||(26409252-26409301)
chr5 (306-379)||(27086076-27086149)
chr5 (331-380)||(27903110-27903159)
chr5 (337-378)||(33584083-33584124)
[»] chr7 (37 HSPs)
chr7 (330-381)||(44558788-44558839)
chr7 (329-382)||(10244722-10244775)
chr7 (329-386)||(38326869-38326926)
chr7 (306-382)||(3830063-3830139)
chr7 (306-382)||(19416509-19416585)
chr7 (306-382)||(27462426-27462502)
chr7 (334-382)||(35142167-35142215)
chr7 (329-385)||(41527552-41527608)
chr7 (331-386)||(3953432-3953487)
chr7 (331-382)||(30857243-30857294)
chr7 (333-382)||(3672569-3672618)
chr7 (315-380)||(5458070-5458135)
chr7 (329-382)||(19599140-19599193)
chr7 (333-382)||(39801701-39801750)
chr7 (329-382)||(42336065-42336118)
chr7 (330-382)||(1399157-1399209)
chr7 (326-378)||(8227348-8227400)
chr7 (306-382)||(16577850-16577926)
chr7 (306-382)||(16587736-16587812)
chr7 (333-381)||(25246767-25246815)
chr7 (330-382)||(35222919-35222971)
chr7 (329-376)||(41250060-41250107)
chr7 (307-382)||(42095934-42096009)
chr7 (329-382)||(20243250-20243304)
chr7 (332-382)||(38088033-38088083)
chr7 (334-376)||(45200194-45200236)
chr7 (333-382)||(8683065-8683114)
chr7 (330-371)||(15433473-15433514)
chr7 (330-383)||(17883882-17883935)
chr7 (329-382)||(19626538-19626591)
chr7 (337-382)||(20205817-20205862)
chr7 (329-370)||(25288671-25288712)
chr7 (334-379)||(39926556-39926601)
chr7 (329-378)||(41029271-41029320)
chr7 (329-382)||(45046228-45046281)
chr7 (329-382)||(46737780-46737833)
chr7 (329-378)||(48527189-48527238)
[»] scaffold0180 (1 HSPs)
scaffold0180 (306-380)||(17729-17802)
[»] scaffold0143 (1 HSPs)
scaffold0143 (326-380)||(4463-4517)
[»] scaffold0188 (1 HSPs)
scaffold0188 (317-382)||(28114-28179)
[»] scaffold0118 (1 HSPs)
scaffold0118 (331-380)||(39995-40044)
[»] scaffold0005 (1 HSPs)
scaffold0005 (329-382)||(239802-239855)
[»] scaffold0334 (1 HSPs)
scaffold0334 (330-382)||(5177-5229)
[»] scaffold0238 (1 HSPs)
scaffold0238 (326-386)||(25380-25440)
[»] scaffold0066 (1 HSPs)
scaffold0066 (331-382)||(17499-17550)
[»] scaffold0122 (2 HSPs)
scaffold0122 (333-375)||(31172-31214)
scaffold0122 (331-380)||(14201-14250)
[»] scaffold1694 (1 HSPs)
scaffold1694 (330-371)||(161-202)
[»] scaffold0735 (1 HSPs)
scaffold0735 (329-378)||(1527-1576)
[»] scaffold0350 (1 HSPs)
scaffold0350 (330-371)||(1254-1295)
[»] scaffold0038 (1 HSPs)
scaffold0038 (329-382)||(31935-31988)
[»] scaffold0031 (1 HSPs)
scaffold0031 (330-379)||(47255-47304)
[»] scaffold0011 (1 HSPs)
scaffold0011 (333-382)||(185258-185307)


Alignment Details
Target: chr4 (Bit Score: 381; Significance: 0; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 9 - 533
Target Start/End: Original strand, 34141105 - 34141627
Alignment:
Q  9 ccaatctccttaactaagctttcaatagcagatggatttggaacttcattgtggaatattggagagagatcaatttctggaatacctttggcttctatga 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34141105 ccaatctccttgactaagctttcaatagcagatggatttggaacttcattgtggaatattggagagagatcaatttctggaatacctttggcttctatga 34141204  T
Q  109 gggagagttttggtctgtgttctagctcttgaacgaaagttgggtctacctctcccatggtgatgatttttctgtttgttagagttgataaatcagtaat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34141205 gggagagttttggtctgtgttctagctcttgaacgaaagttgggtctacctctcccatggtgatgatttttctgtttgttagagttgataaatcagtaat 34141304  T
Q  209 gttgaagatggtttcttgtgttttctcttacatagatagagtatgtaggcgtagtagcgtagccattgtaagaaactaagtcaaatgtannnnnnnngtg 308  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||  |||||        |||    
T  34141305 gttgaagatggtttcttgtgttttctcttatatagatagagtatgtaggcatagtagcgtagccattgtaagaaagaaagtcgtatgtattttttttgtg 34141404  T
Q  309 gtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaagtcgatcatatttaataaagtc 408  Q
    |||| ||||||||||||||||||||||  ||||||||||  ||||||||| |||||||||||| |||| ||| |||||||||| | ||||||||||||||    
T  34141405 gtggttgaggtttggatcctggacctt-aatatattatcaattgtccataccaactgagctaacctcatgagaataaagtcgaacgtatttaataaagtc 34141503  T
Q  409 agatatgtcgcatgaaaatttgtacnnnnnnnnncttcctaaagcagcataaaagtttatcaaatcaaacggcaaagttacactttataaatgtaattaa 508  Q
    | |||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  34141504 acatatgtcgcatgaaaatttgtac-ttttttttcttcctaaagcagcataaaagtttatcagatcaaacggtaaagttacactttataaatgtaattaa 34141602  T
Q  509 ctccaaattttatagacaaaaagtc 533  Q
    |||||||||||||||||||||||||    
T  34141603 ctccaaattttatagacaaaaagtc 34141627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 34137442 - 34137618
Alignment:
Q  9 ccaatctccttaactaagctttcaatagcagatggatttggaacttcattgtggaatattggagagagatcaatttctggaatacctttggcttctatga 108  Q
    ||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||||| ||||||||||| ||||    
T  34137442 ccaatttccttcactaagttttcaatatcagatggatttggaacttcattgtggaatattggagagaggtcaattacgggaattcctttggcttcaatga 34137541  T
Q  109 gggagagttttggtctgtgttctagctcttgaacgaaagttgggtctacctctcccatggtgatgatttttctgtttg 186  Q
      ||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||||| ||||| ||||||||||||    
T  34137542 ttgagagttttggtctgtgttcttgctcttgaacaaaagctgggtctacttctcccatgatgatg-tttttctgtttg 34137618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 34133531 - 34133741
Alignment:
Q  9 ccaatctccttaactaagctttcaatagcagatggatttggaacttcattgtggaatattggagagagatcaatttctggaatacctttggcttctatga 108  Q
    ||||||||||| || ||| |||||||| ||||||||||||||||| ||| ||| |  ||||||||||| |||||||| ||||| ||||||||||| ||||    
T  34133531 ccaatctccttcaccaagttttcaatatcagatggatttggaactgcatggtgaagaattggagagaggtcaatttcgggaattcctttggcttcgatga 34133630  T
Q  109 gggagagttttggtctgtgttctagctcttgaacgaaagttgggtctacctctcccatggtgatgattt-ttctgtttgttagagttgataaatcagtaa 207  Q
     |||||||||||||||||||||| |||||||||| ||||  ||||| || |||||||||||  || ||| ||||| ||| |||||||  | ||||| |||    
T  34133631 tggagagttttggtctgtgttcttgctcttgaacaaaagcagggtccacttctcccatggt--tgttttgttctg-ttgctagagtttgtgaatcaataa 34133727  T
Q  208 tgttgaagatggtt 221  Q
    ||||||||||||||    
T  34133728 tgttgaagatggtt 34133741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 34127258 - 34127391
Alignment:
Q  9 ccaatctccttaactaagctttcaatagcagatggatttggaacttcattgtggaatattggagagagatcaatttctggaatacctttggcttctatga 108  Q
    ||||||| ||| || ||||| |||||||||||| ||| | ||||||||| |||||||||||| ||||| |||||||| ||||| |||| |||||| ||||    
T  34127258 ccaatcttcttcaccaagctatcaatagcagattgatcttgaacttcatggtggaatattggtgagaggtcaatttcgggaattccttcggcttcaatga 34127357  T
Q  109 gggagagttttggtctgtgttctagctcttgaac 142  Q
     ||| |||||||||||||||||| ||||||||||    
T  34127358 tggatagttttggtctgtgttcttgctcttgaac 34127391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 383
Target Start/End: Original strand, 16304089 - 16304165
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    ||||||| | |||||| |||| |||||||||||||||||| | ||||||||| ||||||||||||||| ||||||||    
T  16304089 tggtggccgcggtttgaatcccggaccttgcatatattatgcattgtccataccaactgagctaaacttacgaggat 16304165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 23810020 - 23809944
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | |||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  23810020 gtggtggccggggtttgaaccctgaaccttgcatatattatgctttgtccataccaactgagctaagctcacgagga 23809944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 7230351 - 7230275
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| |||||||| | || |||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  7230351 gtggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 7230275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 12322744 - 12322668
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | || ||| |||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  12322744 gtggtggctgaggtttgaaccccggaacttgcatatattatgcattgtccgtaccaactgagctaagctcacgagga 12322668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 28435238 - 28435314
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||| |||||| | || | |||||||||||||||| | ||||||||| |||||||||||||||||| ||||    
T  28435238 gtggtggctggggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacaagga 28435314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 38453336 - 38453260
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||| |||| | | ||||||||||||||||||||| | ||||||||  |||||||||||| ||||||||||    
T  38453336 gtggtggctggggttcgaaccctggaccttgcatatattatgcattgtccatgccaactgagctaagctcacgagga 38453260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 50362129 - 50362205
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||  ||||||| | ||||||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  50362129 gtggtggccaaggtttgaaccctggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 50362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 34247492 - 34247435
Alignment:
Q  325 tcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||||||| | |||||| || |||||||||||||||||| ||||    
T  34247492 tcctggaccttgcatatattatgcattgtccttaccaactgagctaaactcacaagga 34247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 36203284 - 36203231
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| ||||||||||||||| ||||||||||    
T  36203284 ggaccttgcatatattatgcattgtccttatcaactgagctaagctcacgagga 36203231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 39171371 - 39171436
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| | |||| ||||||||||| |||| | |||||||||||||||||||||| ||||||||||    
T  39171371 ggtttgaaccctgaaccttgcatattttatgcattgtccatatcaactgagctaagctcacgagga 39171436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 2186347 - 2186399
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  2186347 gaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 2186399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 19588225 - 19588149
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | |||||||||||||||| |||| | ||||||||| ||| |||||||| ||||||||||    
T  19588225 gtggtggccggggtttgaaccctggaccttgcatattttatgcattgtccataccaattgagctaagctcacgagga 19588149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 22040696 - 22040652
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactc 375  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  22040696 accttgcatatattatgcattgtccatatcaactgagctaaactc 22040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 52270044 - 52270096
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  52270044 gaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 52270096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 20383559 - 20383488
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    ||||||| || |||||| | || |||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  20383559 gtggtggatggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcac 20383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 26033345 - 26033270
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||  | |||| | |||||||||||||| | ||||||||||||||||| |||  ||||||||||    
T  26033345 tggtggctgaggtttaaaccctgaagcttgcatatattatgcattgtccatatcaactgaactaggctcacgagga 26033270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 43374287 - 43374338
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||| |||| | |||||||||||||||||||||| ||||||||||    
T  43374287 accttgcatattttatgcattgtccatatcaactgagctaagctcacgagga 43374338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 46745236 - 46745185
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | |||||||||||||||||| ||| ||||||||||    
T  46745236 accttgcatatattatacattgtccatatcaactgagataagctcacgagga 46745185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 19935175 - 19935233
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaagt 388  Q
    ||||||||||| ||||| | |||| | |||||||||||||||||||||||||| |||||    
T  19935175 gaccttgcatagattatgcattgttcttatcaactgagctaaactcacgaggacaaagt 19935233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 37193297 - 37193243
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    |||||||||||||||||| | |||||||||  ||||||||||| |||||||||||    
T  37193297 ggaccttgcatatattatacattgtccatactaactgagctaagctcacgaggat 37193243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 37921806 - 37921740
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    |||||| |||| |||||||||||||||||| | |||||| ||  |||||||||||||||| ||||||    
T  37921806 ggtttgaatcccggaccttgcatatattatgcattgtccttactaactgagctaaactcaggaggat 37921740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 9946475 - 9946422
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| ||||||||||    
T  9946475 ggaccttgcatattttatgcattgtccataccaactgagctaagctcacgagga 9946422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 11949776 - 11949829
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||| |||||||||||| |||| |||||    
T  11949776 ggaccttgcatatattatgcattgtccataccaactgagctaagctcatgagga 11949829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 12698644 - 12698595
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||||||||||||| | ||||||| |||||||||||||| |||||||    
T  12698644 gaccttgcatatattatgcattgtccaaatcaactgagctaagctcacga 12698595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 14577520 - 14577573
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| ||||||||||||| | |||||| || |||||||||||||||||||||||    
T  14577520 ggactttgcatatattatgcattgtccttaccaactgagctaaactcacgagga 14577573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 20799407 - 20799460
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  20799407 ggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 20799460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 23304029 - 23304082
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  23304029 ggaccttgcatatattatgccttgtccctaccaactgagctaagctcacgagga 23304082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 24665004 - 24665057
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | || |||||| |||||||||||| ||||||||||    
T  24665004 ggaccttgcatatattatgcattctccataccaactgagctaagctcacgagga 24665057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 43722813 - 43722760
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||||||||| | ||||||||| |||||||| ||||||||||||||    
T  43722813 ggaccttacatatattatgcattgtccataccaactgagttaaactcacgagga 43722760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 23247612 - 23247664
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||| ||||||| ||||||||||    
T  23247612 gaccttgcatatattatgcgttgtccataccaaccgagctaagctcacgagga 23247664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 43034356 - 43034408
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||| ||| ||||||||||    
T  43034356 gaccttgcatatattatgcattgtccataccaactgagttaagctcacgagga 43034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 56205014 - 56204947
Alignment:
Q  309 gtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    ||||| |||||||| |||| |||||||||||||||||| | |||||| || |||||||| |||||||||    
T  56205014 gtggccgaggtttgaatcc-ggaccttgcatatattatgcattgtccttaccaactgagttaaactcac 56204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 56564997 - 56565049
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| |||| | ||||||||||||| |||||||| ||||||||||    
T  56564997 gaccttgcatattttatgcattgtccatatcaattgagctaagctcacgagga 56565049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 897473 - 897426
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    ||||||| |||||||||| | ||||||||| |||||||||||||||||    
T  897473 ggaccttacatatattatacattgtccataccaactgagctaaactca 897426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 6459937 - 6459988
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||| |||||||||| | |||||||||||||||||| ||| ||||||||    
T  6459937 ggaccttacatatattatgcattgtccatatcaactgagttaagctcacgag 6459988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 21052572 - 21052623
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||   || |||||| |||||||||||||||||||||||    
T  21052572 accttgcatatattatgtattatccataccaactgagctaaactcacgagga 21052623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 30051882 - 30051933
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| ||||||| |||| ||||||||||    
T  30051882 accttgcatatattatgcattgtccataacaactgaactaagctcacgagga 30051933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 35021482 - 35021533
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||| ||||   |||||||||||||||||||||| ||||||||||    
T  35021482 accttgcatattttatgtattgtccatatcaactgagctaagctcacgagga 35021533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 381
Target Start/End: Original strand, 49041971 - 49042046
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagg 381  Q
    |||||||| | |||||| | || |||||||||||||||||| | ||||| |||||||||  ||||| |||||||||    
T  49041971 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtctatatcaactaggctaagctcacgagg 49042046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 9196284 - 9196226
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaact 364  Q
    |||||||||||||||   | ||||||||| ||||||||||| | |||||||||||||||    
T  9196284 gtggtggctgaggttcaaaccctggacctggcatatattatgcattgtccatatcaact 9196226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 11198399 - 11198329
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    |||||||| | |||||| | || |||||||||||||||||| | ||||||||   ||||||||||||||||    
T  11198399 gtggtggccggggtttgaaccccggaccttgcatatattatgccttgtccattctaactgagctaaactca 11198329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 38812859 - 38812913
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||| |||||||||||||| | |||||| || | |||||||||||||||||||    
T  38812859 cctggatcttgcatatattatgcattgtccctaccgactgagctaaactcacgag 38812913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 47266212 - 47266150
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||| ||||| |||||| |||||||||| | ||||| ||| ||||||| ||||||||||||    
T  47266212 ggtttgaatcctagaccttacatatattatacattgtctataccaactgatctaaactcacga 47266150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 2649746 - 2649791
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaact 374  Q
    |||||||||||||||||| | |||||| || |||||||||||||||    
T  2649746 ggaccttgcatatattatgcattgtccctaccaactgagctaaact 2649791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 5924720 - 5924647
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||  |||||||| | || ||||||| ||||||||||   ||||||||| |||||||||||| |||||||    
T  5924720 gtggtggtcgaggtttgaaccccggaccttccatatattatgtattgtccatagcaactgagctaagctcacga 5924647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 12671765 - 12671814
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||| |||| | ||||| ||| |||||||||||||||||||||||    
T  12671765 cttgcatattttatgcattgtctataccaactgagctaaactcacgagga 12671814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 16743301 - 16743350
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| | || ||||||||||||||||||| ||||| ||||    
T  16743301 cttgcatatattatgcattatccatatcaactgagctaagctcacaagga 16743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 19479490 - 19479543
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||| ||||| ||||||||||| ||||| ||||    
T  19479490 ggaccttgcatatattatgcattgttcatattaactgagctaagctcacaagga 19479543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 19854609 - 19854560
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| | ||||||||| |||||||||||| ||||| ||||    
T  19854609 cttgcatatattatgcattgtccataccaactgagctaagctcacaagga 19854560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 21317328 - 21317401
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||| ||||||||| | ||  ||||||||||||||||| | |||||  || |||||||||||| |||||||    
T  21317328 gtggtggttgaggtttgaacccctgaccttgcatatattatgcattgtctctaccaactgagctaagctcacga 21317401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 30380576 - 30380527
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | |||||| || |||||||| ||||||||||||    
T  30380576 accttgcatatattatacattgtccttaccaactgagttaaactcacgag 30380527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 31760296 - 31760247
Alignment:
Q  327 ctggaccttgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    |||||||||||||||||||| | ||||| ||| |||||||||||| ||||    
T  31760296 ctggaccttgcatatattatacattgtctataccaactgagctaagctca 31760247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 33413329 - 33413394
Alignment:
Q  315 gaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||| |||  |||| ||| ||||||||| | |||||| |||||||||||||||| |||||||    
T  33413329 gaggtttgaatctcggacattgaatatattatgcattgtccttatcaactgagctaaattcacgag 33413394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 35287520 - 35287573
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| |||| | |||| |||| |||||||||||| ||||||||||    
T  35287520 ggaccttgcatattttatgcattgttcataccaactgagctaagctcacgagga 35287573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 35998035 - 35997994
Alignment:
Q  341 tattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| | |||||||||||||||||||||||||||| ||||    
T  35998035 tattatgcattgtccatatcaactgagctaaactcacaagga 35997994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 47814264 - 47814317
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||||   ||||||||| |||||||||||| || |||||||    
T  47814264 ggaccttgcatatattatgtgttgtccataccaactgagctaagcttacgagga 47814317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 48251923 - 48251964
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaa 372  Q
    |||||||||||||||| | |||| ||||||||||||||||||    
T  48251923 accttgcatatattatacattgttcatatcaactgagctaaa 48251964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 49473693 - 49473640
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| || |||||| ||||| ||||||||||    
T  49473693 ggaccttgcatatattatgcattgtccttaccaactgggctaagctcacgagga 49473640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 383
Target Start/End: Original strand, 52132316 - 52132369
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    ||||||||||||||||| | ||||||| | |||||||||||  |||||||||||    
T  52132316 gaccttgcatatattatgcattgtccaaaccaactgagctatgctcacgaggat 52132369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 53190346 - 53190301
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    ||||||||||||||||||||| | || |||||| ||||||||||||    
T  53190346 cctggaccttgcatatattatgcattatccataccaactgagctaa 53190301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 55421579 - 55421632
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||| |||||||||||||||| | ||||||| | |||||||||||| |||||||    
T  55421579 cctgaaccttgcatatattatgcattgtccaaaccaactgagctaagctcacga 55421632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 25186232 - 25186305
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||| |||||| | || |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  25186232 gtggtggctggggtttgaaccccggaccttgcatatattatgcattgtccatatcaactgagctaaactcacga 25186305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 6723087 - 6723143
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  6723087 cctggaccttgcatatattatacattgtccatatcaactgagttaaactcacgagga 6723143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 29734739 - 29734686
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  29734739 ggaccttgcatatattatgcattgtccatatcaactgagctaaactcacaagga 29734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 33064034 - 33063981
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  33064034 ggaccttgcatatattatgcattgtccatatcaactgagctaagctcacgagga 33063981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 44526198 - 44526123
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| | |||||| |||| ||||||||| |||||||| | ||||||||| |||||||||||| ||||||||||    
T  44526198 tggtggccggggtttgaatcccggaccttgcgtatattatgcattgtccataccaactgagctaagctcacgagga 44526123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 1861821 - 1861875
Alignment:
Q  328 tggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||||| | |||||||||||| ||||||||| ||||||||||    
T  1861821 tggaccttgcatatattatgcattgtccatatcagctgagctaagctcacgagga 1861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 4509608 - 4509543
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    |||||||||||| |||| | | ||||||||||||||||||| | |||||||||||||| |||||||    
T  4509608 gtggtggctgagatttgaaccttggaccttgcatatattatgcattgtccatatcaaccgagctaa 4509543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 10195679 - 10195731
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataa 385  Q
    |||||||||||||| | || ||||||||||||||||||| |||||||||||||    
T  10195679 cttgcatatattatgcattatccatatcaactgagctaagctcacgaggataa 10195731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 22571855 - 22571931
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| |||| | || |||| ||||||||||||| | ||||| ||||||||||||||||  |||||||||    
T  22571855 gtggtggctgagatttgaaccccggacattgcatatattatgcattgtctatatcaactgagctaagttcacgagga 22571931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 27244704 - 27244652
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | |||||| ||||||||||||||| ||||||||||    
T  27244704 gaccttgcatatattatgcattgtccctatcaactgagctaagctcacgagga 27244652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 34464426 - 34464474
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagg 381  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  34464426 cttgcatatattatgcattgtccataccaactgagctaaactcacgagg 34464474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 35820291 - 35820367
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| |||||||| | || ||||||||||| |||||| | |||||| || |||||||||||| ||||||||||    
T  35820291 gtggtggccgaggtttgaaccccggaccttgcatgtattatgcattgtccctaccaactgagctaagctcacgagga 35820367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 39761485 - 39761437
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  39761485 gaccttgcatatattatgcattgtccttatcaactgagctaaactcacg 39761437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 3197094 - 3197145
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | |||||| || |||||||||||||||||||||||    
T  3197094 accttgcatatattatgcattgtccctaccaactgagctaaactcacgagga 3197145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 9383224 - 9383275
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  9383224 accttgcatatattatgcattgtccataccaactgagctaagctcacgagga 9383275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 329 - 384
Target Start/End: Original strand, 35287677 - 35287732
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    ||||||||||| |||||| | |||||| |||||||||||| |||||||||||||||    
T  35287677 ggaccttgcatctattatgcattgtccctatcaactgagccaaactcacgaggata 35287732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 4122027 - 4122085
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaagt 388  Q
    ||||||||||||||||| | ||||||||| || ||||||||| |||||||||| |||||    
T  4122027 gaccttgcatatattatgcattgtccataccagctgagctaagctcacgaggacaaagt 4122085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 330 - 384
Target Start/End: Original strand, 10332289 - 10332343
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    |||||| |||||||||| | |||||| ||||||||||||||| ||||||||||||    
T  10332289 gaccttccatatattatgcattgtccttatcaactgagctaagctcacgaggata 10332343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 20565065 - 20565139
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||| || |||||| | || |||||||||||||||||| | |||||| || |||||||||||| ||||||||    
T  20565065 gtggtggttggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgag 20565139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 25598572 - 25598626
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||  |||||||    
T  25598572 cctggaccttgcatatattatgcattgtccataccaactgagctaagttcacgag 25598626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 43117204 - 43117254
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||||||| | |||||| || |||||||||||||||||||||    
T  43117204 gaccttgcatatattatgcattgtccttaccaactgagctaaactcacgag 43117254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 9519729 - 9519778
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | ||||||||||||| |||||||| ||||||||    
T  9519729 accttgcatatattatgcattgtccatatcaattgagctaagctcacgag 9519778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 12124593 - 12124544
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||||| | |||||| || |||||||||||||||||||    
T  12124593 ggaccttgcatatattatgcattgtccttaccaactgagctaaactcacg 12124544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 20455939 - 20455886
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||| ||| |||||||| ||||||||||    
T  20455939 ggaccttgcatatattatgcattgtccataccaattgagctaagctcacgagga 20455886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 21482532 - 21482585
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | || ||| || |||||||||||||||||||||||    
T  21482532 ggaccttgcatatattatacattatccttaccaactgagctaaactcacgagga 21482585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 27411140 - 27411087
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| |   |||||||||||||||||||| ||||||||||    
T  27411140 ggaccttgcatatattatgcaaggtccatatcaactgagctaagctcacgagga 27411087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 34977252 - 34977199
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||| |||||||| ||| ||||||||||    
T  34977252 ggaccttgcatatattatgcattgtccataccaactgagttaagctcacgagga 34977199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 2257018 - 2256966
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||| ||| ||||||||||    
T  2257018 gaccttgcatatattatgcattgtccataccaactgagttaagctcacgagga 2256966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 4958696 - 4958644
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaa 386  Q
    ||||||| ||||| | ||||||||||||||||||||||||| ||||| |||||    
T  4958696 ttgcatacattatacattgtccatatcaactgagctaaacttacgagcataaa 4958644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 10735821 - 10735897
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || |||||||||||||||||| | | |||| || |||||||||||| ||||||||||    
T  10735821 gtggtggccggggtttgaaccccggaccttgcatatattatgcatcgtccctaccaactgagctaagctcacgagga 10735897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 15427739 - 15427687
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||   |||||||||||||||||||||| |||| |||||    
T  15427739 gaccttgcatatattatatattgtccatatcaactgagctaagctcatgagga 15427687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 19967464 - 19967412
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    |||||||| ||||||| | |||| ||||||||||||||||| |||||||||||    
T  19967464 accttgcacatattatgcattgttcatatcaactgagctaagctcacgaggat 19967412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 380
Target Start/End: Complemental strand, 19976202 - 19976150
Alignment:
Q  329 ggaccttgcatat-attatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||| ||||| | ||||||||| |||||||||||||||||||||    
T  19976202 ggaccttgcatattattatgcattgtccataccaactgagctaaactcacgag 19976150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 31543083 - 31543007
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| || |||||| | || |||||||||||||||||| | || |||||| || ||||||||| ||||||||||    
T  31543083 gtggtggttggggtttgaaccccggaccttgcatatattatgcattatccataccatctgagctaagctcacgagga 31543007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 36615047 - 36615099
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| ||||| ||||||||| |||||||| ||| ||||||||||    
T  36615047 gaccttgcatatactatccattgtccataccaactgagttaagctcacgagga 36615099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 13490768 - 13490717
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataa 385  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||| |||||    
T  13490768 ttgcatatattatacattgtctctatcaactgagctaaactcacgaagataa 13490717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 16877170 - 16877119
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| || ||||||||| ||||||||||    
T  16877170 accttgcatatattatgcattgtccataccagctgagctaagctcacgagga 16877119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 16989301 - 16989250
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| || ||||||||| ||||||||||    
T  16989301 accttgcatatattatgcattgtccataccagctgagctaagctcacgagga 16989250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 22523027 - 22523078
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||   ||||||||| |||||||||||| ||||||||||    
T  22523027 accttgcatatattatgtattgtccataccaactgagctaagctcacgagga 22523078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 30089119 - 30089044
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||||||| | || |||||||| ||||||||| | |||||| || ||||||||||||  |||||||||    
T  30089119 tggtggccgaggtttgaaccccggaccttgtatatattatgcattgtccctaccaactgagctaagttcacgagga 30089044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 30125723 - 30125648
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||||||| | || |||||||| ||||||||| | |||||| || ||||||||||||  |||||||||    
T  30125723 tggtggccgaggtttgaaccccggaccttgtatatattatgcattgtccctaccaactgagctaagttcacgagga 30125648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 7537158 - 7537104
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    |||||||||||||||||| | |||| | ||||||||||| ||| |||||||||||    
T  7537158 ggaccttgcatatattatgcattgttcctatcaactgagttaatctcacgaggat 7537104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 376
Target Start/End: Original strand, 35685075 - 35685121
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    ||||||||||||||||| | |||||| || |||||||||||||||||    
T  35685075 gaccttgcatatattatgcattgtccttaccaactgagctaaactca 35685121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 42066760 - 42066710
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||||||||| | | ||||||||| |||||||||||| |||||||    
T  42066760 ggaccttgcatatattgtgcattgtccataccaactgagctaagctcacga 42066710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 7206173 - 7206120
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||  || |||||||||||| ||||||||||    
T  7206173 ggaccttgcatatattatgcattgtctctaccaactgagctaagctcacgagga 7206120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 24579678 - 24579731
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||||||||||||||||| | ||||||| | ||||| |||||| |||||||    
T  24579678 cctggaccttgcatatattatgcattgtccaaaccaactaagctaagctcacga 24579731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 24593424 - 24593375
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||||| | |||||| || |||||||||||| ||||||    
T  24593424 ggaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 24593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 28202345 - 28202296
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||| |||||||||| | |||||| ||||||||||||||| ||||||    
T  28202345 ggaccttacatatattatgcattgtccctatcaactgagctaagctcacg 28202296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 378
Target Start/End: Complemental strand, 28771626 - 28771581
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||| | |||||| || |||||||||||||||||||    
T  28771626 cttgcatatattatgcattgtccttaccaactgagctaaactcacg 28771581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 37119274 - 37119319
Alignment:
Q  332 ccttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    ||||||||||||||| | |||| ||||||||||||| |||||||||    
T  37119274 ccttgcatatattatgcattgttcatatcaactgagttaaactcac 37119319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 39068725 - 39068770
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||    
T  39068725 cttgcatatattatgcattgtccttatcaactgagctaagctcacg 39068770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 41778957 - 41778998
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagcta 370  Q
    |||||||||||||||||| | ||||||| |||||||||||||    
T  41778957 ggaccttgcatatattatgcattgtccaaatcaactgagcta 41778998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 42791343 - 42791290
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||||  |||| |||||||| ||||||||||    
T  42791343 ggaccttgcatatattatgcattgtccaagtcaagtgagctaagctcacgagga 42791290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 8e-17; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 8717466 - 8717543
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    ||||||| |||||||| | || | |||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  8717466 tggtggccgaggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacgaggata 8717543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 27718907 - 27718960
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  27718907 ggaccttgcatatattatgcattgtccatatcaactgagctaagctcacgagga 27718960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 6447260 - 6447184
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| |||| |  | |||||||||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  6447260 gtggtggctgagatttgaactccggaccttgcatatattatgcattgtccataccaactgagttaaactcacgagga 6447184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 14303214 - 14303160
Alignment:
Q  328 tggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||| ||||||||| | ||||||||| |||||||||||||||||||||||    
T  14303214 tggaccttgtatatattatacattgtccataccaactgagctaaactcacgagga 14303160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 384
Target Start/End: Complemental strand, 17704084 - 17704006
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    |||||||| |||||||| |||   ||||||||||||||||| | |||||| || |||||||||||| ||||||||||||    
T  17704084 gtggtggccgaggtttgaatcacagaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggata 17704006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 30427800 - 30427731
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    ||||| |||||||||| | ||||||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  30427800 tggtgactgaggtttgaa-cctggaccttgcatatattatgcattgtccataccaactgagctaagctcac 30427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 26991772 - 26991825
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||| |||||||    
T  26991772 accttgcatatattatgcattgtccatatcaactgagccaaactcatgaggata 26991825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 29652268 - 29652211
Alignment:
Q  327 ctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    |||||||||||||||||||| | |||| | |||||||||||||||||||| |||||||    
T  29652268 ctggaccttgcatatattatgcattgttcttatcaactgagctaaactcatgaggata 29652211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 6235541 - 6235617
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| |||| ||||||| |||||||||| | | ||||||| |||||||||||||||||| ||||    
T  6235541 gtggtggccggggtttgaatcccggaccttacatatattatgcatcgtccataccaactgagctaaactcacaagga 6235617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 12714385 - 12714440
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaa 386  Q
    |||||||||||||||| | |||||| |  |||||||||||||||||||||||||||    
T  12714385 accttgcatatattatgcattgtcccttccaactgagctaaactcacgaggataaa 12714440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 329 - 384
Target Start/End: Original strand, 22948094 - 22948149
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    |||||||||||||||||| | |||||| ||||||||| || |||||||||||||||    
T  22948094 ggaccttgcatatattatgcattgtccctatcaactgggccaaactcacgaggata 22948149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 37750012 - 37750063
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  37750012 ggactttgcatatattatgcattgttcatatcaactgagctaaactcacgag 37750063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 7553728 - 7553674
Alignment:
Q  328 tggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||||| | |||||| || |||||||| ||||||||||||||    
T  7553728 tggaccttgcatatattatgcattgtccctaccaactgagttaaactcacgagga 7553674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 33482159 - 33482213
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||||| ||||| | |||||| |||||||| |||||||||||||||    
T  33482159 cctggaccttgcataaattatgcattgtccctatcaactaagctaaactcacgag 33482213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 6314336 - 6314389
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| |||| | |||||| ||||||||||||||| ||||||||||    
T  6314336 ggaccttgcatattttatgcattgtccttatcaactgagctaagctcacgagga 6314389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 11709034 - 11708981
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  11709034 ggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 11708981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 19163549 - 19163602
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| ||||| | ||||||||| |||||||||||| ||||||||||    
T  19163549 ggaccttgcataaattatgcattgtccataccaactgagctaagctcacgagga 19163602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 23852959 - 23852906
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||| | |||||||||| ||||||||||    
T  23852959 ggaccttgcatatattatgcattgtccataccgactgagctaagctcacgagga 23852906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 37938543 - 37938490
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| ||||||||||||| | || |||||| |||||||||||||||||||||||    
T  37938543 ggactttgcatatattatgcattatccataccaactgagctaaactcacgagga 37938490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 7996987 - 7996935
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||| ||||    
T  7996987 gaccttgcatatattatgcgttgtccataccaactgagctaagctcacaagga 7996935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 12910820 - 12910872
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||| ||||    
T  12910820 gaccttgcatatattatgcattgtccataccaactgagctaatctcacaagga 12910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 13357431 - 13357507
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| |||||||| | |  | |||||||||||||||| | ||||||||| |||||||| ||| ||||||||||    
T  13357431 gtggtggccgaggtttgaacctcgtaccttgcatatattatgcattgtccataccaactgagttaagctcacgagga 13357507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 17898150 - 17898074
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||| | |||| ||||||||||||||||||  |||||||||| |||||||| ||| ||||| ||||    
T  17898150 gtggtggccggggttagaatcccggaccttgcatatattatgttttgtccataccaactgagttaagctcactagga 17898074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 25136834 - 25136910
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| |||||||| | |  ||||||||||||| |||| | ||||||||| |||||||||||  ||||||||||    
T  25136834 gtggtggccgaggtttgaacctcggaccttgcatattttatgccttgtccataccaactgagctatgctcacgagga 25136910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 27587292 - 27587216
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || ||||||||||||||| || | |||||| || |||||||||||| ||||||||||    
T  27587292 gtggtggccggggtttgaaccccggaccttgcatatatcatgcattgtccttaccaactgagctaagctcacgagga 27587216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 29499822 - 29499766
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| |||| | ||||||||| ||| |||||||| ||||||||||    
T  29499822 cctggaccttgcatattttatgcattgtccataccaattgagctaagctcacgagga 29499766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 33451363 - 33451415
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | || |||||| |||||||||||| ||||||||||    
T  33451363 gaccttgcatatattatgcattatccataccaactgagctaagctcacgagga 33451415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 39821931 - 39821879
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  39821931 gaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 39821879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 42200676 - 42200728
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| |||||||||||| | |||||| ||||||||||||||| ||||||||||    
T  42200676 gaccatgcatatattatacattgtccctatcaactgagctaagctcacgagga 42200728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 330 - 381
Target Start/End: Complemental strand, 498778 - 498727
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagg 381  Q
    ||||||||||||||||| | ||||||||| |||||||| ||| |||||||||    
T  498778 gaccttgcatatattatgcattgtccataccaactgagataacctcacgagg 498727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 2188592 - 2188541
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| ||||| ||||||||| |||||||| ||| ||||||||||    
T  2188592 accttgcatatactatccattgtccataccaactgagttaagctcacgagga 2188541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 371
Target Start/End: Complemental strand, 31888075 - 31888032
Alignment:
Q  328 tggaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    ||||||||||||||||||||| |||||| || ||||||||||||    
T  31888075 tggaccttgcatatattatccattgtccttaccaactgagctaa 31888032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 32051522 - 32051593
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    |||||||| | |||||| | || |||||||||||||||||| | ||||||| | |||||||||||| |||||    
T  32051522 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgagctaagctcac 32051593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 32555300 - 32555249
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||| |||| | ||||||||| ||||| |||||||||||||||||    
T  32555300 accttgcatattttatgcattgtccataccaactaagctaaactcacgagga 32555249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 44084263 - 44084337
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||||||| | || |||||||||||||||||| | |||| |  |||||||||||| ||||||||||||    
T  44084263 tggtggccgaggtttgaaccc-ggaccttgcatatattatgcattgttctaatcaactgagcttaactcacgagga 44084337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 1877676 - 1877726
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||||||| | ||||| |||||||||||| ||| ||||||||    
T  1877676 gaccttgcatatattatgcattgtctatatcaactgagttaagctcacgag 1877726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 8599513 - 8599571
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    |||||||||| | ||||||||   ||||||||| |||||||||||||||||| ||||||    
T  8599513 cctggaccttacgtatattatatattgtccataacaactgagctaaactcacaaggata 8599571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 383
Target Start/End: Original strand, 42208482 - 42208536
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    |||||||||||||||||| | |||||| || ||||||||||||| ||||| ||||    
T  42208482 ggaccttgcatatattatgcattgtccttaccaactgagctaaattcacggggat 42208536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 574432 - 574379
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||||||||| | ||||| |||||||||||||||| ||||| ||||    
T  574432 ggaccttacatatattatgcattgtctatatcaactgagctaagctcacaagga 574379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Original strand, 6038289 - 6038330
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    |||||| |||||||||| | ||||||||||||||||||||||    
T  6038289 gaccttacatatattatgcattgtccatatcaactgagctaa 6038330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 10152502 - 10152449
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    ||||||||||| |||| | ||||| ||| |||||||||||| ||||||||||||    
T  10152502 accttgcatattttatacattgtctataccaactgagctaagctcacgaggata 10152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 13286175 - 13286126
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| | ||||| ||| |||||||||||| ||||||||||    
T  13286175 cttgcatatattatgcattgtctataccaactgagctaagctcacgagga 13286126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 13575333 - 13575284
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||| |||| | |||||| || |||||||||||||||||||||||    
T  13575333 cttgcatatgttatgcattgtccctaccaactgagctaaactcacgagga 13575284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 15310370 - 15310317
Alignment:
Q  330 gaccttgcatatatt-atcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||| || | ||||| |||||||||||||||| ||||||||||    
T  15310370 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcacgagga 15310317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 15490739 - 15490686
Alignment:
Q  330 gaccttgcatatatt-atcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||| || | ||||| |||||||||||||||| ||||||||||    
T  15490739 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcacgagga 15490686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 19778113 - 19778064
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||||| | |||||| || |||||||||||| ||||||    
T  19778113 ggaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 19778064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 27750917 - 27750970
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| |  ||||| || |||||||||||| ||||||||||    
T  27750917 ggaccttgcatatattatgcactgtccttaccaactgagctaagctcacgagga 27750970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 28084328 - 28084275
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    |||||||||||||||| | |||||  ||||||||||| ||| ||||||||||||    
T  28084328 accttgcatatattattcattgtctctatcaactgagttaagctcacgaggata 28084275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 31085877 - 31085930
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||| ||||| | |||| ||||||||||||||||| ||||||||||    
T  31085877 ggaccttacatacattatacattgttcatatcaactgagctaagctcacgagga 31085930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 33763866 - 33763809
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    |||| |||||||||||||||| | |||||| |||||| ||||| |||| |||||||||    
T  33763866 cctgtaccttgcatatattatgcattgtccttatcaattgagcgaaacccacgaggat 33763809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 34997506 - 34997453
Alignment:
Q  330 gaccttgcatatatt-atcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||| || | ||||| |||||||||||||||| ||||||||||    
T  34997506 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcacgagga 34997453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 3e-16; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 18870715 - 18870791
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| |||||||| ||| ||||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  18870715 gtggtggccgaggtttgaatcatggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 18870791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 3755410 - 3755336
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||| |||||||  | ||||||||||||||||||||| | |||||| || |||| ||||||||||||||||    
T  3755410 gtggtggccgaggtttaaaccctggaccttgcatatattatgcattgtccctaccaaccgagctaaactcacgag 3755336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 315 - 385
Target Start/End: Original strand, 5428435 - 5428505
Alignment:
Q  315 gaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataa 385  Q
    |||||||| ||||||||||||||||||||||| | ||||   |||||| |||||||||||||| |||||||    
T  5428435 gaggtttgaatcctggaccttgcatatattatgcattgtttttatcaattgagctaaactcacaaggataa 5428505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 20370296 - 20370349
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    ||||||||||| |||| | |||||||||||||||||||||| ||||||||||||    
T  20370296 accttgcatattttatgcattgtccatatcaactgagctaagctcacgaggata 20370349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 7827555 - 7827503
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| |||||||||| | |||||||||||||||||| ||||||||||||||    
T  7827555 gaccttacatatattatgcattgtccatatcaactgagttaaactcacgagga 7827503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 7829943 - 7829891
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| |||||||||| | |||||||||||||||||| ||||||||||||||    
T  7829943 gaccttacatatattatgcattgtccatatcaactgagttaaactcacgagga 7829891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 10498709 - 10498761
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  10498709 gaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 10498761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 25340914 - 25340990
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || ||||||||||||| |||| | ||||||||| |||||||||||| ||||||||||    
T  25340914 gtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgagga 25340990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 29631257 - 29631181
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| |||| | |||||||||||||||| | ||||||||| |||||||||||| |||| |||||    
T  29631257 gtggtggccggggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgagctaagctcatgagga 29631181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 21331432 - 21331483
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  21331432 accttgcatatattatgcattgtccataacaactgagctaagctcacgagga 21331483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 43345018 - 43345073
Alignment:
Q  327 ctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||||||   |||| |||| |||||||||||||||||||||||    
T  43345018 ctggaccttgcatatattatgtattgttcataccaactgagctaaactcacgagga 43345073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 37921016 - 37921066
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    ||||||||||||| | || ||| ||||||||||||||||||||||||||||    
T  37921016 ttgcatatattatgcattatccctatcaactgagctaaactcacgaggata 37921066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 334837 - 334914
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcc-tttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || ||||||||||||| |||| | |||||||||| |||||||| ||||||||||||||    
T  334837 gtggtggccggggtttgaaccccggaccttgcatattttatgcatttgtccataccaactgagttaaactcacgagga 334914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 16792975 - 16793040
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| | ||||||||||||||||||||| | ||||| ||| |||||| ||||| ||||||||||    
T  16792975 ggtttgaaccctggaccttgcatatattatgcattgtctataccaactgtgctaagctcacgagga 16793040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 27397626 - 27397683
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaag 387  Q
    ||||||||||||||||| | ||||||||| |||||||| |||||||||| ||| ||||    
T  27397626 gaccttgcatatattatacattgtccataccaactgagttaaactcacgtggacaaag 27397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 44579684 - 44579631
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| ||||||||||    
T  44579684 ggaccttgcatattttatgcattgtccataccaactgagctaagctcacgagga 44579631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 51402731 - 51402780
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    |||||| |||||| | ||||||||||||||||||||||||| ||||||||    
T  51402731 ttgcatgtattatgcattgtccatatcaactgagctaaacttacgaggat 51402780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 376
Target Start/End: Complemental strand, 51505919 - 51505874
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  51505919 accttgcatattttatgcattgtccatatcaactgagctaaactca 51505874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 1149083 - 1149135
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  1149083 gaccttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 1149135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 4216413 - 4216465
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | |||||| |||||||||||||||  |||||||||    
T  4216413 gaccttgcatatattatgcattgtccttatcaactgagctaagttcacgagga 4216465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 7824854 - 7824802
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||   ||||| |||||||||||| ||||||||||||||    
T  7824854 gaccttgcatatattatgtattgtctatatcaactgagttaaactcacgagga 7824802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 12976616 - 12976664
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||||||||||||| | |||||| ||||||||||| ||||||||||    
T  12976616 gaccttgcatatattatgcattgtccctatcaactgagttaaactcacg 12976664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 21506772 - 21506824
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| |||| | ||||||||| |||||||||||| ||||||||||    
T  21506772 gaccttgcatattttatgcattgtccataccaactgagctaagctcacgagga 21506824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 371
Target Start/End: Complemental strand, 21549084 - 21549044
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  21549084 accttgcatatattatacattgtccatatcaactgagctaa 21549044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 38130949 - 38131025
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || |||||||||||||||||| | ||||||||| |||||||| ||| ||||| ||||    
T  38130949 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagctcacaagga 38131025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 43490431 - 43490487
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaa 386  Q
    ||||||||||||||||| | |||| |||| |||||||||||| |||||||| |||||    
T  43490431 gaccttgcatatattatgcattgttcataccaactgagctaagctcacgagcataaa 43490487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 378
Target Start/End: Original strand, 51882190 - 51882262
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||| | |||||| | |||||| |||||||||||||| | ||||||||| |||||||| ||| ||||||    
T  51882190 gtggtggccggggtttgaaccctggatcttgcatatattatgcattgtccataccaactgagttaagctcacg 51882262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 53996346 - 53996294
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||| ||||    
T  53996346 gaccttgcatatattatgcattgtccataccaactgagctaagctcacaagga 53996294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 16980369 - 16980420
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  16980369 accttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 16980420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 17507714 - 17507765
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||| ||||||||||||||||  |||||||||    
T  17507714 accttgcatatattatgcattgtcaatatcaactgagctaatttcacgagga 17507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 29687128 - 29687077
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| |||   |||||||||||||||||||||| ||||||||||    
T  29687128 accttgcatataatatatattgtccatatcaactgagctaagctcacgagga 29687077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 53162244 - 53162193
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||| |||| | ||||||||||||| |||||||| ||||||||||    
T  53162244 accttgcatattttatgcattgtccatatcaattgagctaagctcacgagga 53162193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 371
Target Start/End: Original strand, 977954 - 977996
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    |||||||||||||||||| | ||||||||| ||||||||||||    
T  977954 ggaccttgcatatattatgcattgtccataccaactgagctaa 977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 8139762 - 8139708
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    ||||||||||||||||| | ||||||||| ||||| | |||| ||||||||||||    
T  8139762 gaccttgcatatattatgcattgtccataccaactaaactaagctcacgaggata 8139708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 20537927 - 20537877
Alignment:
Q  332 ccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| |||||||||| | |||||||||||||||||||||| ||| ||||||    
T  20537927 ccttccatatattatgcattgtccatatcaactgagctaagctcgcgagga 20537877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 33771739 - 33771685
Alignment:
Q  328 tggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||||| | |||||| || |||||||| ||| ||||||||||    
T  33771739 tggaccttgcatatattatacattgtccttaccaactgagttaagctcacgagga 33771685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 35347309 - 35347359
Alignment:
Q  330 gaccttgcatatattatcc-tttgtccatatcaactgagctaaactcacga 379  Q
    ||||||||||||||||| | |||||||||| |||||||||||| |||||||    
T  35347309 gaccttgcatatattatgcatttgtccatagcaactgagctaagctcacga 35347359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 7557547 - 7557600
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| ||||| | ||||||||| |||||||| ||| ||||||||||    
T  7557547 ggaccttgcatacattatgcattgtccataccaactgagttaagctcacgagga 7557600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 11508496 - 11508549
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||| ||||||||| || | |||||||||||||| ||||||| ||||||||||    
T  11508496 ggaccctgcatatatcatgcattgtccatatcaaccgagctaagctcacgagga 11508549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Original strand, 25441514 - 25441555
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    ||||||||||||||||| | ||||||||| ||||||||||||    
T  25441514 gaccttgcatatattatgcattgtccataccaactgagctaa 25441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 32629128 - 32629079
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| ||||||    
T  32629128 ggaccttgcatattttatgcattgtccataccaactgagctaagctcacg 32629079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 32836244 - 32836171
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||||||||||| | |  ||| ||| ||||||| |||| | ||||||||| |||||||||||| |||||||    
T  32836244 gtggtggctgaggttcgaactctgaaccgtgcatattttatgcattgtccataccaactgagctaagctcacga 32836171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 378
Target Start/End: Complemental strand, 33745167 - 33745098
Alignment:
Q  309 gtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||| |||||| | ||  |||||||||||| |||| | ||||||||||||| |||||||| ||||||    
T  33745167 gtggctggggtttgaaccccagaccttgcatattttatgcattgtccatatcaattgagctaagctcacg 33745098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 38388016 - 38387967
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| | |||||  ||||||||||||||| ||||||||||    
T  38388016 cttgcatatattatgcattgtcactatcaactgagctaagctcacgagga 38387967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 39779070 - 39779021
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | ||||||||| |||| |||||| |||||||||    
T  39779070 accttgcatatattatgcattgtccataccaaccgagctatactcacgag 39779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 45096073 - 45096032
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    ||||||||||||||||| | |||||| |||||||||||||||    
T  45096073 gaccttgcatatattatgcattgtccttatcaactgagctaa 45096032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 46226090 - 46226143
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| || ||| |||| ||||||||||||||    
T  46226090 ggaccttgcatatattatgcattgtccctaccaattgagttaaactcacgagga 46226143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 48315037 - 48315090
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | || ||| || |||||||||||| ||||||||||    
T  48315037 ggaccttgcatatattatgcattatccttaccaactgagctaagctcacgagga 48315090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 50037382 - 50037309
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||||||  ||||| | || | |||||||||| ||||| | ||||||||| |||||||||||| |||||||    
T  50037382 gtggtggctggagtttgaaccccgaaccttgcatacattatgcattgtccataccaactgagctaagctcacga 50037309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 376
Target Start/End: Original strand, 54230114 - 54230159
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    |||||||||||||||| | |||||| || |||||||||||||||||    
T  54230114 accttgcatatattatgcattgtccttaccaactgagctaaactca 54230159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 34521180 - 34521251
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    |||||||| |||||||| | || |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  34521180 gtggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaaactcac 34521251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 44641572 - 44641522
Alignment:
Q  332 ccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  44641572 ccttgcatatattatgcattgtccatatcaactgagctaaactcacgagga 44641522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 15854078 - 15854154
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| |||||||| |||||||| |||||||||||||| | | ||||||| |||||||||||| |||| |||||    
T  15854078 gtggtggccgaggtttgaatcctggatcttgcatatattatgcatcgtccataccaactgagctaagctcatgagga 15854154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 310 - 382
Target Start/End: Complemental strand, 26755683 - 26755611
Alignment:
Q  310 tggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| |||||||| | || ||||||||||||||| || | |||||||||||||||||||||| ||||||||||    
T  26755683 tggccgaggtttgaaccccggaccttgcatatataatgcattgtccatatcaactgagctaagctcacgagga 26755611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 7158821 - 7158768
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| |||| | |||||||||||||||| ||||||||||||||||    
T  7158821 ggaccttgcatattttatgcattgtccatatcaactgggctaaactcacgagga 7158768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 3693810 - 3693862
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||    
T  3693810 gaccttacatatattatgctttgtctatatcaactgagctaagctcacgagga 3693862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 42045386 - 42045438
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  42045386 gaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 42045438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 329 - 380
Target Start/End: Complemental strand, 563249 - 563198
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||||||||  ||||||| ||||||||||||||| ||||||||    
T  563249 ggaccttgcatatattatgttttgtccttatcaactgagctaagctcacgag 563198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 45140017 - 45140068
Alignment:
Q  327 ctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||||||| | ||||||||| |||||||||||| ||||||    
T  45140017 ctggaccttgcatatattatgcattgtccataccaactgagctaagctcacg 45140068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 3393583 - 3393629
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||    
T  3393583 accttgcatatattatgcattgttcatatcaactgagctaaactcac 3393629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 16826402 - 16826349
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| ||||||||||    
T  16826402 ggaccttgcatattttatgcattgtccatagcaactgagctaagctcacgagga 16826349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 25533021 - 25532968
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||| ||||||| |||| ||||||||||    
T  25533021 ggaccttgcatatattatgcattgtccataccaactgaactaagctcacgagga 25532968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 27449462 - 27449511
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  27449462 cttgcatatattatgcattgtccatattaactgagctaagctcacgagga 27449511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 31890762 - 31890815
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| ||||||||||| | |||||| || |||||||||||||||||||||||    
T  31890762 ggacctcgcatatattatgcattgtccttaccaactgagctaaactcacgagga 31890815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 36679638 - 36679585
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||||| ||||||  ||||||||||| || ||||||||||    
T  36679638 ggaccttgcatatattatccattgtcccgatcaactgagccaagctcacgagga 36679585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 51127912 - 51127957
Alignment:
Q  338 atatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||    
T  51127912 atatattatgcattgtccatattaactgagctaaactcacgaggat 51127957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 52441524 - 52441577
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||| ||| |||||||||||| ||||||||||    
T  52441524 ggaccttgcatatattatgcattgtctataccaactgagctaagctcacgagga 52441577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 1794667 - 1794591
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||  |||||||| | || ||| |||||||||||||| | |||||||||  ||||||||||| ||||||||||    
T  1794667 gtggtggtcgaggtttgaaccccggatcttgcatatattatgcattgtccatactaactgagctaagctcacgagga 1794591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 7732481 - 7732417
Alignment:
Q  318 gtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||| |||| ||| |||| ||||||||| | || |||| |||||||||||||||||||||||||    
T  7732481 gtttgaatcccggatcttggatatattatgcattatccaaatcaactgagctaaactcacgagga 7732417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 16967209 - 16967257
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||||||||| | ||||||||||||||| |||||| |||||||    
T  16967209 accttgcatatattatgcattgtccatatcaactaagctaagctcacga 16967257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 17284002 - 17283950
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||||||||||||||||| | |||||| || |||||||||||| ||||||    
T  17284002 cctggaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 17283950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 17917139 - 17917199
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    |||||| |||| | ||||| ||||| |||| | ||||||||||||||||||||||||||||    
T  17917139 ggtttgaatcccgaaccttacatattttatgcattgtccatatcaactgagctaaactcac 17917199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 21400037 - 21400089
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  21400037 gaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 21400089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 29233988 - 29234040
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| |||| | ||||| ||| |||||||||||||||||||||||    
T  29233988 gaccttgcatattttatgcattgtctataccaactgagctaaactcacgagga 29234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 30937522 - 30937474
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||||||||||||| | |||||| |||||||| |||||||||||||    
T  30937522 gaccttgcatatattatacattgtccttatcaactaagctaaactcacg 30937474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 37098495 - 37098547
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  37098495 gaccttgcatatattattcattgtccctaccaactgagctaagctcacgagga 37098547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 44243944 - 44243868
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| || |||||| |  ||||||||| |||||||||| | |||| | || |||||||||||||||||||||||    
T  44243944 gtggtggttggggtttgaactctggaccttacatatattatgcattgttcctaccaactgagctaaactcacgagga 44243868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 49183220 - 49183168
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||   |||||| || |||||||||||||||||||||||    
T  49183220 gaccttgcatatattatgtattgtccttaccaactgagctaaactcacgagga 49183168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 377
Target Start/End: Complemental strand, 49868059 - 49868011
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    |||||||||||||||||| | || ||||||||||||||| |||||||||    
T  49868059 ggaccttgcatatattatgcattatccatatcaactgagttaaactcac 49868011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 3509954 - 3510005
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||||| | ||||||||| ||||||||||||  |||||||    
T  3509954 ggaccttgcatatattatgcattgtccataccaactgagctaagttcacgag 3510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 13794516 - 13794571
Alignment:
Q  324 atcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||| ||||||||||||||||| | || ||| ||||||||||||||| |||||||    
T  13794516 atcctagaccttgcatatattatgcattatccttatcaactgagctaagctcacga 13794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 380
Target Start/End: Original strand, 16533034 - 16533097
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||| ||||| ||||||||||||||||| | |||| | || |||| ||||||||||||||||    
T  16533034 ggtttgaatcctagaccttgcatatattatgcattgttcctaccaaccgagctaaactcacgag 16533097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 378
Target Start/End: Original strand, 24124845 - 24124892
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||| | |||||| || |||||||||||||||||||    
T  24124845 accttgcatatattatgcattgtccttaacaactgagctaaactcacg 24124892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 27172713 - 27172788
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| | |||||| | | |||| ||||||||||||||  |||||||||| |||||||| ||| ||||||||||    
T  27172713 tggtggcaggggtttgaaccttggagcttgcatatattatgttttgtccataccaactgagttaagctcacgagga 27172788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 386
Target Start/End: Complemental strand, 43611470 - 43611415
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaa 386  Q
    ||||| ||||||||||   ||||||||| |||||||||||||||||||| ||||||    
T  43611470 accttacatatattatgtattgtccataccaactgagctaaactcacgaagataaa 43611415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 48681948 - 48681999
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | |||| |||| |||||||||||| ||||||||||    
T  48681948 accttgcatatattatgcattgttcataccaactgagctaagctcacgagga 48681999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 379
Target Start/End: Original strand, 7574111 - 7574181
Alignment:
Q  309 gtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||||||| | | | ||||||||||||| ||| | |||||| || |||||||| |||||||||||    
T  7574111 gtggctgaggtttgaaccattgaccttgcatatactatgcattgtccttaccaactgagttaaactcacga 7574181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 8253785 - 8253739
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    |||||||||||||||| | ||||||||| |||||||||||| |||||    
T  8253785 accttgcatatattatgcattgtccataccaactgagctaagctcac 8253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 379
Target Start/End: Original strand, 9116893 - 9116935
Alignment:
Q  337 catatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||| | |||||||||||||||||| |||||||||||    
T  9116893 catatattatgcattgtccatatcaactgagttaaactcacga 9116935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 24324416 - 24324466
Alignment:
Q  332 ccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||| | |||||| ||||| ||||||||| ||||||||||    
T  24324416 ccttgcatatattatgcattgtccttatcacctgagctaagctcacgagga 24324466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 3481608 - 3481555
Alignment:
Q  330 gaccttgcatatattatcc-tttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||| || |||||||||||| ||||||||||    
T  3481608 gaccttgcatatattatgcatttgtccctaccaactgagctaagctcacgagga 3481555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 3528482 - 3528535
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||||||||| | ||||   ||||||||||||||||||||||||||    
T  3528482 ggaccttacatatattatacattgtttctatcaactgagctaaactcacgagga 3528535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 317 - 378
Target Start/End: Complemental strand, 5907859 - 5907798
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||| | ||||||||||||||||||||| | |||||| |  |||||||||||| ||||||    
T  5907859 ggtttgaaccctggaccttgcatatattatgcattgtccttgccaactgagctaagctcacg 5907798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 12182918 - 12182881
Alignment:
Q  309 gtggctgaggtttggatcctggaccttgcatatattat 346  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  12182918 gtggctgaggtttgaatccaggaccttgcatatattat 12182881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 17139530 - 17139583
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| ||||||||| | |||||| || |||||||||||| ||||||||||    
T  17139530 ggaccttgaatatattatgcattgtccctaccaactgagctaagctcacgagga 17139583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 24752661 - 24752714
Alignment:
Q  330 gaccttgcatat-attatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| ||||| | ||||||||| |||||||||||| ||||||||||    
T  24752661 gaccttgcatattattatgcattgtccataccaactgagctaagctcacgagga 24752714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 26803464 - 26803517
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| ||||||||||||| | ||||||||| ||||||||||||  |||||||||    
T  26803464 ggactttgcatatattatgcattgtccataccaactgagctaagttcacgagga 26803517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 34632213 - 34632164
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| | ||||| ||| |||||||||||| ||||||||||    
T  34632213 cttgcatatattatacattgtctataccaactgagctaagctcacgagga 34632164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 38448879 - 38448928
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||||| | |||||| || |||||||||||| ||||||    
T  38448879 ggaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 38448928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 39252267 - 39252320
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||| ||||||||||   ||||| |||||||||||||||| |||||||    
T  39252267 cctggaccttacatatattatgtattgtcgatatcaactgagctaagctcacga 39252320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 41974807 - 41974758
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | || ||| |||||||||| |||||||||||||    
T  41974807 accttgcatatattatgcattatccctatcaactgaactaaactcacgag 41974758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 42888623 - 42888574
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| ||||||    
T  42888623 ggaccttgcatattttatgcattgtccataccaactgagctaagctcacg 42888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 43840346 - 43840391
Alignment:
Q  337 catatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||| |||| | |||||||||||||||||| ||||||||||||||    
T  43840346 catattttatgcattgtccatatcaactgagttaaactcacgagga 43840391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 45003448 - 45003395
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||||| ||||||  ||||||||||  || ||||||||||    
T  45003448 ggaccttgcatatattatccattgtcccgatcaactgaggcaagctcacgagga 45003395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 45190259 - 45190324
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    |||||||||  |||||| |||| | |||||||||||||||| | ||||||||| ||||||| ||||    
T  45190259 gtggtggctagggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgaactaa 45190324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 381
Target Start/End: Original strand, 49875611 - 49875664
Alignment:
Q  328 tggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagg 381  Q
    ||||||||||||||||||| | |||||| || |||||||| ||| |||||||||    
T  49875611 tggaccttgcatatattatgcattgtccttaccaactgagttaagctcacgagg 49875664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 371
Target Start/End: Original strand, 50638926 - 50638971
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||    
T  50638926 cctggaccttgcatatattatgcattgtccttaccaactgagctaa 50638971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 52592428 - 52592493
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| ||||  |||||||||||||||||   |||||| || ||| |||||||||||||||||||    
T  52592428 ggtttgaatccccgaccttgcatatattatatattgtccttaccaattgagctaaactcacgagga 52592493  T

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Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 56854 - 56779
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||| |||||| | | ||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  56854 gtggtggctggggtttgaaac-tggaccttgcatatattatacattgtccataccaactgagctaagctcacgagga 56779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 18256954 - 18256878
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||| ||| || || |||||||||||||||||| | |||||| ||||||||||||||| ||||||||||    
T  18256954 gtggtggttgagattttgaacccggaccttgcatatattatgcattgtccttatcaactgagctaagctcacgagga 18256878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 17382129 - 17382075
Alignment:
Q  332 ccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaa 386  Q
    ||||||||||||||| | ||||||||| |||||||||||| ||||||||||||||    
T  17382129 ccttgcatatattatacattgtccataccaactgagctaagctcacgaggataaa 17382075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 20744185 - 20744133
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  20744185 gaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 20744133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 33824951 - 33824887
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    ||||||| |||||||| | || |||||||||||||||||| | |||||| |||||||||||||||    
T  33824951 tggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccttatcaactgagctaa 33824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 32053834 - 32053783
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  32053834 accttgcatatattatgcattgtccataccaactgagctaagctcacgagga 32053783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 21373416 - 21373470
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| |||| | ||||||||| ||| |||||||||||||||||    
T  21373416 cctggaccttgcatattttatgcattgtccataccaattgagctaaactcacgag 21373470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 24623332 - 24623378
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcac 377  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||||    
T  24623332 accttacatatattatgcattgtccatatcaactgagctaaactcac 24623378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 13496164 - 13496111
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||| ||||||||||||| ||| ||||||||||    
T  13496164 ggaccttgcatatattatgcattgttcatatcaactgagttaagctcacgagga 13496111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 28951470 - 28951389
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaag 387  Q
    |||||||| |||||||  |  ||| |||||||||||||||| | |||| |||| |||||||| ||| |||||||||||||||    
T  28951470 gtggtggccgaggtttaaactctgaaccttgcatatattatgcattgttcataccaactgagttaagctcacgaggataaag 28951389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 30374522 - 30374595
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||||||||||||| ||||   |||||||||||||||| | |||||| || ||| |||| |||||||||||    
T  30374522 gtggtggctgaggtttgaatcccaaaccttgcatatattatacattgtccttaccaattgaggtaaactcacga 30374595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 8138448 - 8138524
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| ||||||||| | ||  |||||| |||||||||| | |||| | |||||||||||||||| |||||||||    
T  8138448 gtggtggttgaggtttgaaccccagaccttacatatattatgcattgttcttatcaactgagctaaattcacgagga 8138524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 8569780 - 8569708
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||| | |||||| | || |||||||||||||||||| | ||||||||| ||| |||| ||||||||||    
T  8569780 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaattgagttaaactcacg 8569708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 21296809 - 21296753
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| |||| | ||||||  | |||||||||||||||||||||||    
T  21296809 cctggaccttgcatattttatgcattgtcccaaccaactgagctaaactcacgagga 21296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 1918471 - 1918522
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||||| | ||||| ||| |||||||| ||||||||||||    
T  1918471 ggaccttgcatatattatgcattgtctataccaactgagttaaactcacgag 1918522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 12204415 - 12204364
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||| |||||||||| | |||||||||||||||||||||  ||||||||||    
T  12204415 accttacatatattatgcattgtccatatcaactgagctatgctcacgagga 12204364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 12333579 - 12333634
Alignment:
Q  327 ctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||| |||| | |||||||||  ||||||||||| ||||||||||    
T  12333579 ctggaccttgcatattttatgcattgtccatactaactgagctaagctcacgagga 12333634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 27928098 - 27928175
Alignment:
Q  308 ggtggctgaggtttggatcctggaccttgcatatattatcct---ttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||| |||| ||||||||||||||||||  |   |||||  || |||||||| ||||||||||||||    
T  27928098 ggtggctgaggtttgaatcccggaccttgcatatattattatgtattgtctctaccaactgagttaaactcacgagga 27928175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 3373398 - 3373444
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||||||| | |||||||||||||||||| |||| ||||||    
T  3373398 cttgcatatattatgcattgtccatatcaactgagttaaattcacga 3373444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 316 - 382
Target Start/End: Complemental strand, 9923301 - 9923235
Alignment:
Q  316 aggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||| | |||||| ||||||||| | |||||| |||||| |||||||||||||| ||||    
T  9923301 aggtttgaatcccgaaccttgtatatattatgcattgtccttatcaattgagctaaactcacaagga 9923235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 20720794 - 20720844
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||| |||||||||| | ||||||||| |||||||||||| |||||||    
T  20720794 ggaccttacatatattatgcattgtccataacaactgagctaagctcacga 20720844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 26320576 - 26320626
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| |||||||    
T  26320576 ggaccttgcatattttatgcattgtccataccaactgagctaagctcacga 26320626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 655762 - 655815
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||| ||| |||||||||||| ||||| ||||    
T  655762 ggaccttgcatatattatgcattgtcgataccaactgagctaagctcacaagga 655815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 4450310 - 4450261
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||||| | |||||  ||||||||||||||| ||||||    
T  4450310 ggaccttgcatatattatgcattgtctttatcaactgagctaagctcacg 4450261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Original strand, 4455610 - 4455651
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    ||||||||||||||||| | ||||||||| ||||||||||||    
T  4455610 gaccttgcatatattatgccttgtccataccaactgagctaa 4455651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 9111095 - 9111042
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||| |||| ||||||| |||| ||||||||||    
T  9111095 ggaccttgcatatattatgcattgttcataccaactgaactaagctcacgagga 9111042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 9392681 - 9392734
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | || | |||| |||||||||||| ||||||||||    
T  9392681 ggaccttgcatatattatgcatttttcataacaactgagctaagctcacgagga 9392734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 16204803 - 16204848
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaact 374  Q
    |||||||||||| ||||| | |||||||||||||| ||||||||||    
T  16204803 ggaccttgcatacattatgcattgtccatatcaaccgagctaaact 16204848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 28231438 - 28231491
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| |||||||||||| || ||||| ||||    
T  28231438 ggaccttgcatatattatgcattgtccctatcaactgagccaagctcactagga 28231491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 32193874 - 32193923
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | |||| | || |||||||||||||||||||||    
T  32193874 accttgcatatattatgcattgttcttaccaactgagctaaactcacgag 32193923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 33938694 - 33938743
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | |||| |||| |||||||||||| ||||||||    
T  33938694 accttgcatatattatgcattgttcataccaactgagctaagctcacgag 33938743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 34828342 - 34828301
Alignment:
Q  341 tattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| | ||||||||| |||||||||||||||||||||||    
T  34828342 tattatgcattgtccataccaactgagctaaactcacgagga 34828301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 40715939 - 40716015
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || |||||||||||||||||| | ||||||||||||| |||||||| ||||||||||    
T  40715939 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccatatcaattgagctaagctcacgagga 40716015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 16701582 - 16701648
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    |||||| |||| |||||||||||||||||| | |||||| || |||||||||||| |||||||||||    
T  16701582 ggtttgaatcccggaccttgcatatattattcattgtccctaccaactgagctaagctcacgaggat 16701648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 37932378 - 37932325
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  37932378 ggaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 37932325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 22522791 - 22522867
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || |||||||||||||||||| | ||||||||| |||| ||||||| ||||||||||    
T  22522791 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaaccgagctaagctcacgagga 22522867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 40446030 - 40445978
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | |||||| ||||||||||| ||||||||||||||    
T  40446030 gaccttgcatatattatgcattgtccttatcaactgagttaaactcacgagga 40445978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 39610359 - 39610405
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||    
T  39610359 ttgcatatattatgcattgtccatatcaactgagctaagctcacgag 39610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 6624824 - 6624771
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||  |||||||||||| ||||||||||    
T  6624824 ggaccttgcatatattatgcattgtccatgccaactgagctaagctcacgagga 6624771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 15889471 - 15889406
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| | ||| ||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  15889471 ggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 15889406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 28207180 - 28207127
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| ||||||||||    
T  28207180 ggaccttgcatattttatgcattgtccataccaactgagctaagctcacgagga 28207127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 32200460 - 32200513
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| | ||||||||||||| ||||||||||    
T  32200460 ggaccttgcatatattatgcattgtccctgtcaactgagctaagctcacgagga 32200513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 6489054 - 6489002
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  6489054 gaccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 6489002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 17862022 - 17861974
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| | |||||| || |||||||||||||||||||||||    
T  17862022 ttgcatatattatgcattgtccctaccaactgagctaaactcacgagga 17861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 18489090 - 18489142
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||| ||| |||||||||||||||||| ||||    
T  18489090 gaccttgcatatattatgcattgtctataccaactgagctaaactcacaagga 18489142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 33645703 - 33645755
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| |||||||| ||| ||||||||||    
T  33645703 gaccttgcatatattatacattgtccataccaactgagttaagctcacgagga 33645755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 5015326 - 5015276
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | |||||| || |||||||||||||||||||||||    
T  5015326 accttgcatatattattcattgtcc-taccaactgagctaaactcacgagga 5015276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 380
Target Start/End: Original strand, 8545002 - 8545053
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||||| | |||||| ||||||||||| ||| ||||||||    
T  8545002 ggaccttgcatatattatgcattgtccttatcaactgagttaagctcacgag 8545053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 24485745 - 24485694
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| ||||| |||||| ||||||||||    
T  24485745 accttgcatatattatgcattgtccataccaactaagctaagctcacgagga 24485694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 378
Target Start/End: Original strand, 25604015 - 25604062
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||| |  ||||||||||||||||||||| ||||||    
T  25604015 accttgcatatattatgcactgtccatatcaactgagctaagctcacg 25604062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 36321509 - 36321560
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  36321509 accttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 36321560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 42505918 - 42505867
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| |||||||||||| || |||||||    
T  42505918 accttgcatatattatgcattgtccataccaactgagctaagcttacgagga 42505867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 11017223 - 11017169
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    ||||||||||||||||| | || ||| || ||||||||||||||||||| |||||    
T  11017223 gaccttgcatatattatgcattatccctaccaactgagctaaactcacgcggata 11017169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 16133079 - 16133129
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||||||| | |||||| || |||||||||||| ||||||||    
T  16133079 gaccttgcatatattatgcattgtccttaccaactgagctaagctcacgag 16133129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 384
Target Start/End: Complemental strand, 20258616 - 20258538
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggata 384  Q
    ||||||| || |||| | |||||| |||||||||||||||| | || |||||| |||||||| ||| |||||| |||||    
T  20258616 gtggtggttggggttcgaatcctgcaccttgcatatattatgcattatccataccaactgagttaacctcacgtggata 20258538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 32622946 - 32622892
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||| ||||||||||| |||| | ||||||||| ||||||||||||| |||||||    
T  32622946 cctgaaccttgcatattttatacattgtccataccaactgagctaaattcacgag 32622892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 34436896 - 34436846
Alignment:
Q  332 ccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  34436896 ccttgcatatattatgcattgtccctaccaactgagctaagctcacgagga 34436846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 316 - 382
Target Start/End: Original strand, 35270681 - 35270747
Alignment:
Q  316 aggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| | |||||||||||||||| |||| | ||||||  | |||||||||||| ||||||||||    
T  35270681 aggtttgaaccctggaccttgcatattttatgcattgtcccaaccaactgagctaagctcacgagga 35270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 41650952 - 41651002
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||||||||||| | ||||||||| |||||||| ||| |||||||    
T  41650952 ggaccttgcatatattatgcattgtccataccaactgagttaagctcacga 41651002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 3445260 - 3445313
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||| ||||| | |||||| || |||||||||||| ||||||||||    
T  3445260 ggaccttgcatacattatgcattgtccttaccaactgagctaagctcacgagga 3445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 4432164 - 4432111
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||||||||| | |||||| ||||||||||| |||||| |||||||    
T  4432164 ggaccttacatatattatgcattgtccttatcaactgagttaaacttacgagga 4432111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 5485234 - 5485181
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| ||||||||||||| | |||||| || |||||||||||| ||||||||||    
T  5485234 ggacattgcatatattatgcattgtccctaccaactgagctaagctcacgagga 5485181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 10704344 - 10704397
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| ||||| ||||    
T  10704344 ggaccttgcatattttatgcattgtccataccaactgagctaagctcacaagga 10704397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 18147760 - 18147719
Alignment:
Q  335 tgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    |||||||||||| | |||||| ||||||||||||||||||||    
T  18147760 tgcatatattatgcattgtccttatcaactgagctaaactca 18147719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 18589880 - 18589933
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||| |||| |||||||| ||| ||||||||||    
T  18589880 ggaccttgcatatattatgcattgttcataccaactgagttaagctcacgagga 18589933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 20175769 - 20175720
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| ||||||||| | ||||||||| |||||||||||| ||||||||||    
T  20175769 cttgtatatattatacattgtccataccaactgagctaagctcacgagga 20175720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 22394075 - 22394034
Alignment:
Q  337 catatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||| | |||||||||||||||||||||| ||||||    
T  22394075 catatattatgcattgtccatatcaactgagctaagctcacg 22394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 26409301 - 26409252
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||| |||||||||| | ||||||||| |||||||||||| ||||||    
T  26409301 ggaccttacatatattatgcattgtccataccaactgagctaagctcacg 26409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 27086149 - 27086076
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||| |||||| | ||||||||||||||||||||| | |||| | ||  |||||| |||| |||||||    
T  27086149 gtggtggctggggtttgaaccctggaccttgcatatattatacattgttcttacaaactgaactaagctcacga 27086076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 27903159 - 27903110
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | |||| |||| ||||||| |||||||||||||    
T  27903159 accttgcatatattatgcattgttcataccaactgaactaaactcacgag 27903110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 33584124 - 33584083
Alignment:
Q  337 catatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  33584124 catatattatacattgttcatatcaactgagctaaactcacg 33584083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 330 - 381
Target Start/End: Original strand, 44558788 - 44558839
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagg 381  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  44558788 gaccttgcatatattatgcattgtccataccaactgagctaaactcacgagg 44558839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 10244775 - 10244722
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  10244775 ggaccttgcatatattatgcattgtccataccaactgagctaagctcacgagga 10244722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 38326869 - 38326926
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaa 386  Q
    ||||||||||| ||||||  |||||||||| |||||||||||||||||| ||||||||    
T  38326869 ggaccttgcatgtattatgttttgtccataccaactgagctaaactcacaaggataaa 38326926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 3830139 - 3830063
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||| |||||| | ||||||||||||||||||||| | |||||| ||  |||||||||||  |||||||||    
T  3830139 gtggtggctggggtttgaaccctggaccttgcatatattatgcattgtccctacaaactgagctaagttcacgagga 3830063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 19416585 - 19416509
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || ||||||||||||| |||| | ||||||||| |||||||||||| ||||||||||    
T  19416585 gtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgagga 19416509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 27462426 - 27462502
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| | |||||| | || |||||||||||||||||| | ||||||||| |||||||||||  ||||||||||    
T  27462426 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctatgctcacgagga 27462502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 35142167 - 35142215
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  35142167 ttgcatatattatgcattgtccatatcaactgagctaagctcacgagga 35142215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 41527608 - 41527552
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataa 385  Q
    |||||||||||||||||| | ||||||||| ||||| |||||| |||||||||||||    
T  41527608 ggaccttgcatatattatgcattgtccataccaactaagctaagctcacgaggataa 41527552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 386
Target Start/End: Complemental strand, 3953487 - 3953432
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaa 386  Q
    |||||||||||||||| | ||||||||| | |||||||||| ||||||||||||||    
T  3953487 accttgcatatattatgcattgtccataccgactgagctaagctcacgaggataaa 3953432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 30857294 - 30857243
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | ||||||||| ||||| |||||||||||||||||    
T  30857294 accttgcatatattatgcattgtccataccaactaagctaaactcacgagga 30857243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 3672569 - 3672618
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||   |||||||||||||||||||||||||||| ||||    
T  3672569 cttgcatatattatgtattgtccatatcaactgagctaaactcacaagga 3672618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 5458070 - 5458135
Alignment:
Q  315 gaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||| ||||  ||||||||||||||||| | |||| | ||||||||||||||| ||||||||    
T  5458070 gaggtttgaatcccagaccttgcatatattatgcattgttcttatcaactgagctaagctcacgag 5458135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 19599193 - 19599140
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||||| |||||||| ||||||||| ||||    
T  19599193 ggaccttgcatatattatgcattgtccataccaactgagttaaactcaccagga 19599140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 39801750 - 39801701
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  39801750 cttgcatatattatgcattgtccataccaactgagctaagctcacgagga 39801701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 42336118 - 42336065
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||| |||||| | |||||| |||||||||||||||| |||||||||    
T  42336118 ggaccttgcatgtattatgcattgtccttatcaactgagctaaattcacgagga 42336065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 1399209 - 1399157
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| || | ||||||||| |||||||| ||||||||||||||    
T  1399209 gaccttgcatatatcatgcattgtccataccaactgagttaaactcacgagga 1399157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 8227400 - 8227348
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||| || |||||||||| | |||||| ||||||||||||||||||||||    
T  8227400 cctggactttacatatattatgcattgtccttatcaactgagctaaactcacg 8227348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 16577850 - 16577926
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| |||||||| | ||  |||||||||||||||||   |||||| || |||||||||||||| ||||||||    
T  16577850 gtggtggccgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactgagctaaacccacgagga 16577926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 16587812 - 16587736
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||| |||||||| | ||  |||||||||||||||||   |||||| || |||||||||||||| ||||||||    
T  16587812 gtggtggccgaggtttgaaccccagaccttgcatatattatgtattgtccctaccaactgagctaaacccacgagga 16587736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 25246815 - 25246767
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagg 381  Q
    |||||||||||||| | |||||  |||||||||||||||||||||||||    
T  25246815 cttgcatatattatgcattgtctttatcaactgagctaaactcacgagg 25246767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 35222971 - 35222919
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| || | |||||| |||||||||| |||||||||||||||    
T  35222971 gaccttgcatatatcatgcattgtccctatcaactgacctaaactcacgagga 35222919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 376
Target Start/End: Original strand, 41250060 - 41250107
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    |||||||||||||||||| | |||| | ||||||||||||||||||||    
T  41250060 ggaccttgcatatattatacattgttcttatcaactgagctaaactca 41250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 42095934 - 42096009
Alignment:
Q  307 tggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||| |||||||| | || |||||||||||||||||| | | |||||||| |||| |||||| |||| |||||    
T  42095934 tggtggcagaggtttgaaccccggaccttgcatatattatgcatggtccatataaactaagctaagctcatgagga 42096009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 20243304 - 20243250
Alignment:
Q  329 ggaccttgcatat-attatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||| ||||| | ||||||||| |||||||||||| ||||||||||    
T  20243304 ggaccttgcatattattatgcattgtccataccaactgagctaagctcacgagga 20243250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 38088033 - 38088083
Alignment:
Q  332 ccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||  ||||||| || |||||||||||| ||||||||||    
T  38088033 ccttgcatatattatgttttgtccttaccaactgagctaagctcacgagga 38088083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 45200236 - 45200194
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactca 376  Q
    |||||| |||||| | |||||||||||||||||||||||||||    
T  45200236 ttgcatgtattatgcattgtccatatcaactgagctaaactca 45200194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 8683114 - 8683065
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||| | ||||| ||| |||||||||||| ||||||||||    
T  8683114 cttgcatatattatgcattgtctataccaactgagctaagctcacgagga 8683065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Original strand, 15433473 - 15433514
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    |||||||||||||||||   ||||||||||||||||||||||    
T  15433473 gaccttgcatatattattaattgtccatatcaactgagctaa 15433514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 383
Target Start/End: Complemental strand, 17883935 - 17883882
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggat 383  Q
    ||||||||||||||||| | || |||||||||| ||||||||  ||||||||||    
T  17883935 gaccttgcatatattatacattatccatatcaagtgagctaaggtcacgaggat 17883882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 19626538 - 19626591
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||| | |||||||| ||| ||||||||||    
T  19626538 ggaccttgcatatattatgcattgtccaaaccaactgagttaagctcacgagga 19626591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 382
Target Start/End: Complemental strand, 20205862 - 20205817
Alignment:
Q  337 catatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||| | ||||||||| ||||||||||||||| |||||||    
T  20205862 catatattatgcattgtccataccaactgagctaaacttacgagga 20205817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 370
Target Start/End: Complemental strand, 25288712 - 25288671
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagcta 370  Q
    ||||||||||||| |||| | |||||||||||||||||||||    
T  25288712 ggaccttgcatatcttatgcattgtccatatcaactgagcta 25288671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 39926556 - 39926601
Alignment:
Q  334 ttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    ||||||||||||| | |||||| ||||||||||||||| |||||||    
T  39926556 ttgcatatattatgcattgtccttatcaactgagctaagctcacga 39926601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 41029320 - 41029271
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||||| | |||||| || |||||||||||| ||||||    
T  41029320 ggaccttgcatatattatacattgtccttaccaactgagctaagctcacg 41029271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 45046228 - 45046281
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||||    ||||||||||||||||||||  ||||||||||    
T  45046228 ggaccttgcatatattatgtactgtccatatcaactgagctatgctcacgagga 45046281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 46737833 - 46737780
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | ||||||| |  ||||||||||| ||||||||||    
T  46737833 ggaccttgcatatattatgcattgtccaaacaaactgagctaagctcacgagga 46737780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 48527238 - 48527189
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    |||||||||||||||||| | |||||| ||||||||||| ||| ||||||    
T  48527238 ggaccttgcatatattatgcattgtccttatcaactgagataagctcacg 48527189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 17802 - 17729
Alignment:
Q  306 gtggtggctgaggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||| |||||| | || ||||||||||| |||||| | ||||||||| |||||||||||||||||||||    
T  17802 gtggtggctggggtttgaaccc-ggaccttgcatgtattatgcattgtccataccaactgagctaaactcacgag 17729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 4517 - 4463
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    ||||||||||||||| ||||| | |||||| |||||||| |||||||||||||||    
T  4517 cctggaccttgcataaattatgcattgtccctatcaactaagctaaactcacgag 4463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 382
Target Start/End: Original strand, 28114 - 28179
Alignment:
Q  317 ggtttggatcctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||| ||||  |||||||||||  |||| | ||||||||| |||||||||||||||||||||||    
T  28114 ggtttgaatcccagaccttgcatacgttatgcattgtccataccaactgagctaaactcacgagga 28179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 40044 - 39995
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||||||||    
T  40044 accttgcatatattatgcattgtccataccaactgagctaagctcacgag 39995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 239855 - 239802
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||| ||||||||||||| | |||||| || |||||||||||||||||||||||    
T  239855 ggactttgcatatattatgcattgtccttaccaactgagctaaactcacgagga 239802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 5229 - 5177
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||||||||||| | ||||||||| ||| |||||||||||||| ||||    
T  5229 gaccttgcatatattatgcattgtccataccaattgagctaaactcacaagga 5177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 25440 - 25380
Alignment:
Q  326 cctggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgaggataaa 386  Q
    ||||||||||||||||||||| | |||||| || |||||||| ||| |||||| |||||||    
T  25440 cctggaccttgcatatattatgcattgtccttaccaactgagttaagctcacggggataaa 25380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 17550 - 17499
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||| | |||||||| ||| ||||||||||||||| ||||    
T  17550 accttgcatatattatgcattgtccatgtcagctgagctaaactcacaagga 17499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 375
Target Start/End: Original strand, 31172 - 31214
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactc 375  Q
    |||||||||||||| | ||||||||| ||||||||||||||||    
T  31172 cttgcatatattatgcattgtccataccaactgagctaaactc 31214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 14201 - 14250
Alignment:
Q  331 accttgcatatattatcctttgtccatatcaactgagctaaactcacgag 380  Q
    |||||||||||||||| | |||| |||| |||||||| ||||||||||||    
T  14201 accttgcatatattatgcattgttcataccaactgagttaaactcacgag 14250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1694 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1694
Description:

Target: scaffold1694; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 202 - 161
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    ||||||||||| ||||| | ||||||||||||||||||||||    
T  202 gaccttgcatacattatgcattgtccatatcaactgagctaa 161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 1576 - 1527
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacg 378  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| ||||||    
T  1576 ggaccttgcatattttatgcattgtccataccaactgagctaagctcacg 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 1295 - 1254
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaa 371  Q
    |||||| |||||||||| | ||||||||||||||||||||||    
T  1295 gaccttacatatattatgcattgtccatatcaactgagctaa 1254  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 31935 - 31988
Alignment:
Q  329 ggaccttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    |||||||||||||||||| | |||||| |||||||||||| || ||||| ||||    
T  31935 ggaccttgcatatattatgcattgtccctatcaactgagccaagctcactagga 31988  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 47255 - 47304
Alignment:
Q  330 gaccttgcatatattatcctttgtccatatcaactgagctaaactcacga 379  Q
    |||||||||||| |||| | ||||||||| |||||||||||| |||||||    
T  47255 gaccttgcatattttatgcattgtccataccaactgagctaagctcacga 47304  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 185307 - 185258
Alignment:
Q  333 cttgcatatattatcctttgtccatatcaactgagctaaactcacgagga 382  Q
    ||||||||| |||| | ||||||||| |||||||||||| ||||||||||    
T  185307 cttgcatattttatgcattgtccataccaactgagctaagctcacgagga 185258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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