View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5884-Insertion-7 (Length: 257)
Name: NF5884-Insertion-7
Description: NF5884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5884-Insertion-7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 9 - 257
Target Start/End: Original strand, 24880663 - 24880906
Alignment:
| Q |
9 |
catcttacattcctttttaattgccaaagacagccataagttctaatttttagccatactttggtttattttttggtcaaaggatttaaaaacaagattt |
108 |
Q |
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| T |
24880663 |
catcttacattcctttttaattgccaaagacagccataagttctaatttttagccatactttggtttattttttggtcaaaggatttaaaaacaagattt |
24880762 |
T |
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| Q |
109 |
cttccattaatccaattaactccatttgttagtattgtctttctccacaccggttttggattccattgaattgaaatggaaattgcatcaaaggttaatg |
208 |
Q |
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| T |
24880763 |
cttccattaatccaattaactccatttgttagtattgtctttctccacaccggttttggattcc-----attgaaatggaaattgcattaatggttaatg |
24880857 |
T |
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| Q |
209 |
gatgccgtattaagtgccgcatagacaaatcaaattctttgcatcatat |
257 |
Q |
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| T |
24880858 |
gatgccgtattaagtgccacatagacaaatcaaattctttgcatcatat |
24880906 |
T |
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