View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5884_high_24 (Length: 220)
Name: NF5884_high_24
Description: NF5884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5884_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 12 - 211
Target Start/End: Original strand, 34911467 - 34911663
Alignment:
| Q |
12 |
gagatgaaagtggaagaagagattgaaattgaaagtgtaatcgaatagtagtattatgaatgtgtagtgccatttacacttacacaaaagagaatgaatg |
111 |
Q |
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| T |
34911467 |
gagatgaaagtggaagaagagattgaaattgaaagtgtaatcgaatagt---attatgaatgtgtagtgccatttacacttacacaaaagagaatgaatg |
34911563 |
T |
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| Q |
112 |
aaggtgtagatgctatgctatgaaaaggaacaagattgaatttgaaacatgagttgagttgagaaacaagtaaagtgggtttggttttttgagtggatag |
211 |
Q |
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| T |
34911564 |
aaggtgtaaatgctatgctatgaaaaggaacaagattgaatttgaaacatgagttgagttgagaaacaagtaaagtgggtttggttttttgagtggatag |
34911663 |
T |
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