View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5884_high_9 (Length: 361)
Name: NF5884_high_9
Description: NF5884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5884_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 108 - 345
Target Start/End: Complemental strand, 35035249 - 35035012
Alignment:
| Q |
108 |
caacaatggcaccagacaaagtaccttaaatgaaatagtaaatatgtaaataaaagacaaaattatgtagcctaaatatcattcggtgtcaggaacattt |
207 |
Q |
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| T |
35035249 |
caacaatggcaccagacaaagtaccttaaatgaaatagtaaatatgtaaataaaagacaaaattatgtagcctaaatatcattcggtgtcaggaacattt |
35035150 |
T |
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| Q |
208 |
gtagcttcctgatcagctggtgaagtacccatgaaaggaaagactggagcagcaacaataccatttccaccaacctgaagaaaatccccaccatatggta |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35035149 |
gtagcttcctgatcagctggtgaagtacccatgaaaggaaagactggagcagcaacaataccatttccaccaacctgaagaaaatccccaccatatggta |
35035050 |
T |
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| Q |
308 |
caatgtgaaatggtggtaatgatggtgatatcggaaat |
345 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
35035049 |
caatgtgaaatggtggtaatgatggtgatatcggaaat |
35035012 |
T |
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