View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5885-Insertion-12 (Length: 377)
Name: NF5885-Insertion-12
Description: NF5885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5885-Insertion-12 |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 9 - 279
Target Start/End: Original strand, 31553643 - 31553913
Alignment:
| Q |
9 |
gtaattgaagggtttttcactctcccatttcctcttttctctaccacctaccgtagagccatcaaggtgcatgcacctttattttattttttcctttatg |
108 |
Q |
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| T |
31553643 |
gtaattgaagggtttttcactctcccatttcctcttttctctaccacctaccgtagagccatcaaggtgcatgcacctttattttattttttcctttatg |
31553742 |
T |
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| Q |
109 |
agtttaatagatatgtatcatcgtaccaaatttatcaatatcatatttgttcgagtggaactatattcaaatctttaaacgggtcaaagtttcatacctt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31553743 |
agtttaatagatatgtatcatcgtaccaaatttatcaatatcatatttgttcgagtggaactatattcaaatctttaaacgggtcaaagtttcatacctt |
31553842 |
T |
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| Q |
209 |
gtgttaatgtgaatggaaggaacgactcatcaaaaaatagtgtaaaaatttttatgcatatattcaatcac |
279 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
31553843 |
gtgttaatgtgattggaaggaacgactcatcaaaaaatagtgtaaaaaattttatgcatatattcaatcac |
31553913 |
T |
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