View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5885_low_3 (Length: 675)
Name: NF5885_low_3
Description: NF5885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5885_low_3 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 572; Significance: 0; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 572; E-Value: 0
Query Start/End: Original strand, 18 - 666
Target Start/End: Complemental strand, 22914071 - 22913432
Alignment:
| Q |
18 |
tgaattaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagttttcaacaatggannn |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22914071 |
tgaattaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagttttcaacaatggaagt |
22913972 |
T |
|
| Q |
118 |
nnnnnnnnnnnnnnnggtgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttc |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22913971 |
agtagtaa---------tgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttc |
22913881 |
T |
|
| Q |
218 |
tttctccaacaaaatggttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggttt |
317 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22913880 |
tttctccaacaaaagggttaccaaattcactaccaagtcaataccttggtctattcaatgaatcaaacaatggaaacaacaataaccatgtttttggttt |
22913781 |
T |
|
| Q |
318 |
ggagcttgatactattatgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagca |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
22913780 |
ggagcttgatactattatgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcggca |
22913681 |
T |
|
| Q |
418 |
ggatattatgatattgatggtaatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaaga |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22913680 |
ggatattatgatattgatggtaatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaaga |
22913581 |
T |
|
| Q |
518 |
ttgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgt |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22913580 |
ttgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgt |
22913481 |
T |
|
| Q |
618 |
tggattctcatcttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22913480 |
tggattctcatcttcaacaggttcaattctaacttctcattatattctt |
22913432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 134 - 666
Target Start/End: Complemental strand, 22898559 - 22898030
Alignment:
| Q |
134 |
gtgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatg |
233 |
Q |
| |
|
|||| ||||||||||| ||||||||||| |||||||||| | || | | ||| | |||||||||||||||||||||||||||| | ||||| |||||| | |
|
|
| T |
22898559 |
gtgtttcttctttctcaactacttttgtgtttgccataagacctcaatatccaactcttagtggccatggaattgtttttgttgtctctcctacaaaagg |
22898460 |
T |
|
| Q |
234 |
gttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactatt |
333 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||| || || | || ||||||||||| | | ||||||||||||||| | || |||||||||||| |
|
|
| T |
22898459 |
gctaccaaattcactacaaagtcaataccttggtctctttaacaaatccaacaatggaaatagtagcaaccatgtttttggtgttgaacttgatactatt |
22898360 |
T |
|
| Q |
334 |
atgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgatattg |
433 |
Q |
| |
|
|| | || ||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||| || | ||||||||||||||| || |
|
|
| T |
22898359 |
attagtagtgagtttaatgatatcaatgataaccatgttggtattgatatcaatgatttgaaatcagctaaatcaactcctgcaggatattatgatgtta |
22898260 |
T |
|
| Q |
434 |
atggtaatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaagattgatgttactttagc |
533 |
Q |
| |
|
|||| | | |||||||||||| |||||| |||||| || ||||| | ||| | ||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
22898259 |
atgg---tcaactcaagaatttgacccttttcagtggcaatcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttactttagc |
22898163 |
T |
|
| Q |
534 |
tccaattaatgttgttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttggattctcatcttca |
633 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||||| | |||| |||||||||||||||||| ||||| | |
|
|
| T |
22898162 |
tccaattaatgttgttaaaccaaaacaacctttgttgtcattgaccagagatctttctccaattttaaacaatagtatgtatgttggattttcatcagct |
22898063 |
T |
|
| Q |
634 |
acaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
|| |||||| || | |||||||||||||||||| |
|
|
| T |
22898062 |
actggttcagttttcacttctcattatattctt |
22898030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 192 - 666
Target Start/End: Complemental strand, 22894182 - 22893711
Alignment:
| Q |
192 |
tagtggccatggaattgtttttgttctttctccaacaaaatggttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatgga |
291 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| || ||||||||||||| | | || |||||||||||| || | || || ||||||||| |
|
|
| T |
22894182 |
tagtggccatggaattgtttttgttctttctcctacaaaagggctaccaaattcactccaaggttcataccttggtctctttgacgattccaacaatgga |
22894083 |
T |
|
| Q |
292 |
aacaacaataaccatgtttttggtttggagcttgatactattatgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtt |
391 |
Q |
| |
|
|| | ||||| ||||||||| | || |||||||||||| ||| ||||| |||||||||||||| ||||||||||| ||||||||||||| || |
|
|
| T |
22894082 |
aatcctagcaaccacgtttttggtgttgaacttgatactattgaaaatcgtgagtttgatgatatcaatgataaccatgttggtattgatatcaatgatt |
22893983 |
T |
|
| Q |
392 |
tgaaatcagagaaatcggcttcagcaggatattatgatattgatggtaatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggtt |
491 |
Q |
| |
|
||||||||| || || || | ||||||||||||||| | ||||| | ||||||||| | |||||| | ||||||| || ||||| | ||| | |
|
|
| T |
22893982 |
tgaaatcagctaattcaactcctgcaggatattatgatggtaatggtcaa---ttcaagaatataagccttatcagtggctatcctatgcaggtatggat |
22893886 |
T |
|
| Q |
492 |
ggaatatgatggagtgaagaaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttatcattgaacaaagatctttct |
591 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22893885 |
tgaatatgatggtgaaaagaaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttatcattgaccaaagatctttct |
22893786 |
T |
|
| Q |
592 |
tcaattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||| | || |||||| ||||||||||||||||||||||| |
|
|
| T |
22893785 |
ccaattcttaacaatagtatgtatgttggattttcatcagctactggttcatttctaacttctcattatattctt |
22893711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 134 - 666
Target Start/End: Complemental strand, 22809940 - 22809399
Alignment:
| Q |
134 |
gtgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatg |
233 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| | || | | ||| | ||||||| |||||||||||| |||||| |||| || |||||| | |
|
|
| T |
22809940 |
gtgtatcttctttctcaactacttttgtatttgccataagacctcaatatccaactcttagttcccatggaattgtatttgttgtttcacctacaaaagg |
22809841 |
T |
|
| Q |
234 |
gttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactatt |
333 |
Q |
| |
|
| | ||||||||| | |||||||||| |||||||| || || | || ||||||||||||| | |||||||||||| ||| | || || |||||| || |
|
|
| T |
22809840 |
gctgccaaattcaaaagcaagtcaatatcttggtctctttaaccaatccaacaatggaaacagtagtaaccatgttttcggtgttgaactagatactctt |
22809741 |
T |
|
| Q |
334 |
atgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgatattg |
433 |
Q |
| |
|
| | || ||||| |||||||||||||| |||||| |||| ||||||||||||| ||||||||||| || || || | |||||||||||||||| | |
|
|
| T |
22809740 |
ctaagtagtgagtttgatgatatcaatgataaccatattggtattgatatcaatgatttgaaatcagctaattcaactcctgcaggatattatgatagta |
22809641 |
T |
|
| Q |
434 |
atggtaatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaagattgatgttactttagc |
533 |
Q |
| |
|
||||| | ||||||||| |||||||||| ||||||| || ||||| | ||| | ||||||||||| | |||||||||||||||| ||||||||| |
|
|
| T |
22809640 |
atggtcaa---ttcaagaatatgagccttttcagtggctatcctatgcatgtatggattgaatatgatggtgaaaagaaaaagattgatgctactttagc |
22809544 |
T |
|
| Q |
534 |
tccaattaatgttg------------ttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttgga |
621 |
Q |
| |
|
|||||||||||||| ||||||||| || ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22809543 |
tccaattaatgttggttttaatgttgttaaaccaacacgacctttgttatcattcaccaaagatctttctccaattcttaacactagtatgtatgttgga |
22809444 |
T |
|
| Q |
622 |
ttctcatcttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||||| ||||| |
|
|
| T |
22809443 |
ttctcatcttcaacaggttctattctatcttctcattatgttctt |
22809399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 134 - 666
Target Start/End: Complemental strand, 22876212 - 22875680
Alignment:
| Q |
134 |
gtgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatg |
233 |
Q |
| |
|
|||| ||||||||||| ||||||||||| |||||||||| | || | | ||| | | ||||||| ||||||||||||||||| ||||||| |||||| | |
|
|
| T |
22876212 |
gtgtgtcttctttctcaactacttttgtatttgccataagacctcaatatccaactattagtggtgatggaattgtttttgttgtttctcctacaaaagg |
22876113 |
T |
|
| Q |
234 |
gttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactatt |
333 |
Q |
| |
|
| ||||||| ||||||||| |||||||||||||||| || || | |||||||||||||||| | ||||||||||||||| | || |||||| || || |
|
|
| T |
22876112 |
gctaccaaactcactaccacgtcaataccttggtctctttaacaattcaaacaatggaaacagtagcaaccatgtttttggtgttgaacttgattctgtt |
22876013 |
T |
|
| Q |
334 |
atgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgatattg |
433 |
Q |
| |
|
||| || ||||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||| | || |||| |||||||||| || || |
|
|
| T |
22876012 |
ttgactaatgagtttaatgatatcgatgataaccatgttggaattgatatcaatgatttgaaatcagctatttcaacttctacaggatattacga---tg |
22875916 |
T |
|
| Q |
434 |
atggtaatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaagattgatgttactttagc |
533 |
Q |
| |
|
| |||| |||| | |||| |||||| ||||| | || ||||| | ||| | || |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22875915 |
aatataatcgattcagggatttatcccttttcagtggatatcccatgcaggtatggattgactatgatggagtgaaaaaaaagattgatgttactttagc |
22875816 |
T |
|
| Q |
534 |
tccaattaatg-ttgt--taaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttggattctcatct |
630 |
Q |
| |
|
|||||| ||| | || |||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||| ||| ||||||||||||||||||||| |
|
|
| T |
22875815 |
tccaatagatgctagtaataaaccaacacaacctttgttatcattgaccaaagatctttctccaattctcaacaatagaatgtatgttggattctcatct |
22875716 |
T |
|
| Q |
631 |
tcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
|||||||||| |||| || ||||||||||||||||| |
|
|
| T |
22875715 |
tcaacaggtttaattttagcttctcattatattctt |
22875680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 139 - 666
Target Start/End: Complemental strand, 22889583 - 22889050
Alignment:
| Q |
139 |
tcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatggttac |
238 |
Q |
| |
|
||||||||||| ||||||||| | |||||||||| | || | | | | ||| || ||||||||||||||||||||||| |||||||||||||| || ||| |
|
|
| T |
22889583 |
tcttctttctcaactacttttttatttgccataatacctcaatatgcaaatattggtggccatggaattgtttttgttatttctccaacaaaagggctac |
22889484 |
T |
|
| Q |
239 |
caaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactattatgaa |
338 |
Q |
| |
|
|| |||||||||||||||||||||||||||| || || || || |||| |||||||| | ||||||||||||||| | |||||||| ||| | || |
|
|
| T |
22889483 |
cagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacagtagcaaccatgtttttggtgttgagcttgacactcgtcaaaa |
22889384 |
T |
|
| Q |
339 |
tacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgatattgatggt |
438 |
Q |
| |
|
| ||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||||| | || || | ||||||||||||||| | |||| |
|
|
| T |
22889383 |
ttttgagtttgatgatatcaacgataaccatgttggaattgatatcaatgatttgaaatcagctgattcaactcctgcaggatattatgatggttatgg- |
22889285 |
T |
|
| Q |
439 |
aatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaagattgatgttactttagctccaa |
538 |
Q |
| |
|
| | |||||| |||| ||||| ||||| | || ||||| | ||| | ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22889284 |
--tcaattcaaggatttatccctttccagtggataccctatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttactttagcaccaa |
22889187 |
T |
|
| Q |
539 |
ttaatgttg---------ttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttggattctcatc |
629 |
Q |
| |
|
| | ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
22889186 |
tgagtgttggtgctagtaataaaccaacacaacctttgttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcatc |
22889087 |
T |
|
| Q |
630 |
ttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
||||||||| | ||| || ||||||| ||||||||| |
|
|
| T |
22889086 |
ttcaacagggttaatggtagcttctcagtatattctt |
22889050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 134 - 666
Target Start/End: Complemental strand, 22815323 - 22814785
Alignment:
| Q |
134 |
gtgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatg |
233 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||| |||| | || | | ||| | |||||||||| ||||||||||||||||||||||| |||||| | |
|
|
| T |
22815323 |
gtgtgtcttctttctcaactacttttgtgtttgcaataagacctcaatatccaccttttagtggccaaggaattgtttttgttctttctcctacaaaagg |
22815224 |
T |
|
| Q |
234 |
gttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactatt |
333 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| || || || || ||||||||||||| || ||||||||||||||| | |||||||| ||| | |
|
|
| T |
22815223 |
gctaccaaattcactaccaagtcaataccttggtctctttaacgattccaacaatggaaacagtaacaaccatgtttttggtgttgagcttgacactcgt |
22815124 |
T |
|
| Q |
334 |
atgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgatattg |
433 |
Q |
| |
|
|| | |||| |||||||||||||| ||||||||||| || ||||||||| ||||||||||| || || || | |||||||||||| || | |
|
|
| T |
22815123 |
caagatttgcagtttgatgatatcaatgataaccatgttggtatcgatatcaattatttgaaatcagctaattcaactcctgcaggatattataatgatc |
22815024 |
T |
|
| Q |
434 |
atggtaatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaagattgatgttactttagc |
533 |
Q |
| |
|
|||| | | |||| | | || ||||| | ||| || || || || | ||| | || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22815023 |
atgg---tcaattcagggagttatccctttccaatggatttcctatacaggtatggattgactatgatggagtgaagaaaaagattgatgttactttagc |
22814927 |
T |
|
| Q |
534 |
tccaattaatgttg---------ttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttggattc |
624 |
Q |
| |
|
|||||| | ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
22814926 |
tccaatgagtgttggtgctagtaataaaccaacacaacctttgttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattc |
22814827 |
T |
|
| Q |
625 |
tcatcttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
|||||||||||||| | | || || ||||||||||||||||| |
|
|
| T |
22814826 |
tcatcttcaacagggttacttgtagcttctcattatattctt |
22814785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 134 - 664
Target Start/End: Complemental strand, 22840348 - 22839812
Alignment:
| Q |
134 |
gtgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatg |
233 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||| ||||||||||| | ||| | |||||||||||||||||||||||| ||| ||||||| |||||| | |
|
|
| T |
22840348 |
gtgtttcttctttctcaactacttttgtattttccataaaatcttcatatccaactcttagtggccatggaattgttttcgttatttctcctacaaaagg |
22840249 |
T |
|
| Q |
234 |
gttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactatt |
333 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| || || | || |||| ||||||| ||||||||||||||| | || ||||||||| || |
|
|
| T |
22840248 |
gctaccaaattcactaccaagtcaataccttggtctctttaaccaatccaacattggaaacggtggcaaccatgtttttggtgttgaacttgatactctt |
22840149 |
T |
|
| Q |
334 |
atgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgatattg |
433 |
Q |
| |
|
| | || ||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||| || || || | ||||||||||| || || |
|
|
| T |
22840148 |
ctaagtagtgagtttgatgatatcaatgataaccatgttggtattgatatcaatgatttgaaatcagctaattcaactcctgcaggatattacga---tg |
22840052 |
T |
|
| Q |
434 |
atggtaatgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaagattgatgttactttagc |
533 |
Q |
| |
|
| |||| |||| | |||| ||| | ||||| | || |||||| | ||| | ||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
22840051 |
aatataatcgattcagggatttatccctctccagtggatatcctatgcaagtatggattgaatatgatagagtgaagaaaaagattgatgttaccttagc |
22839952 |
T |
|
| Q |
534 |
tccaattaatgttg---------ttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttggattc |
624 |
Q |
| |
|
|||| ||| ||||| |||||||| |||||| ||||||||||| |||||||||||| ||||||| |||| ||| ||||||||||||||| |
|
|
| T |
22839951 |
tccatttagtgttggttttagtcataaaccaacacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattc |
22839852 |
T |
|
| Q |
625 |
tcatcttcaacaggttcaattctaacttctcattatattc |
664 |
Q |
| |
|
|||||||||||||| | ||| | ||||||||||||||| |
|
|
| T |
22839851 |
tcatcttcaacagggttcattgcagcttctcattatattc |
22839812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 142 - 664
Target Start/End: Complemental strand, 22831319 - 22830791
Alignment:
| Q |
142 |
tctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatggttaccaa |
241 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||||||| || ||| | |||||||||||||||||||||||||||||||||| |||||| || |||||| |
|
|
| T |
22831319 |
tctttctcaactacttttgtatttaccataaaatccatgtatccatctattagtggccatggaattgtttttgttctttctcctacaaaagggctaccaa |
22831220 |
T |
|
| Q |
242 |
attcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactattatgaatac |
341 |
Q |
| |
|
|||||||||||| ||||||| ||||||| || || |||| |||| |||||||| | ||||||||||||||| | |||||||| ||| || ||| |
|
|
| T |
22831219 |
attcactaccaaatcaatactttggtctctttaactactccaacattggaaacagtagcaaccatgtttttggtgttgagcttgacactcgtaaaaattt |
22831120 |
T |
|
| Q |
342 |
ggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgatattgatggtaat |
441 |
Q |
| |
|
||||| |||||||||||||| || |||||||||||||||||||||| ||||||||||| || || || | ||||||||||||||| | |||| |
|
|
| T |
22831119 |
tgagtttgatgatatcaatgataatcatgttggaattgatatcaatgatttgaaatcagctaattcaactcctgcaggatattatgatgatactggt--c |
22831022 |
T |
|
| Q |
442 |
gagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaagattgatgttactttagctccaatta |
541 |
Q |
| |
|
|| |||| |||||| |||| ||||| || ||||| | ||| | ||||||||||||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
22831021 |
ga-ttcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttaccttagctccagtta |
22830923 |
T |
|
| Q |
542 |
atgttg---------ttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttggattctcatcttc |
632 |
Q |
| |
|
||||| |||||||| |||||| ||||||||||| |||||||||||| ||||||| |||| ||| ||||||||||||||||||||||| |
|
|
| T |
22830922 |
gtgttggttttagtcataaaccaacacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttc |
22830823 |
T |
|
| Q |
633 |
aacaggttcaattctaacttctcattatattc |
664 |
Q |
| |
|
|||||| | ||| | ||||||||||||||| |
|
|
| T |
22830822 |
aacagggttcattgcagcttctcattatattc |
22830791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 496 - 666
Target Start/End: Complemental strand, 22805246 - 22805076
Alignment:
| Q |
496 |
tatgatggagtgaagaaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttatcattgaacaaagatctttcttcaa |
595 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| | ||||| ||||||| ||| ||||||||||||| ||| |
|
|
| T |
22805246 |
tatgatggagtgaagaaaaagattgatgttactttagctccagtttatgttgttaaaccaacaggaccttcgttatcaatgaccaaagatctttctccaa |
22805147 |
T |
|
| Q |
596 |
ttcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| | | || | ||||||||||||||||| |
|
|
| T |
22805146 |
ttcttaacaatagtatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatattctt |
22805076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 493 - 666
Target Start/End: Complemental strand, 22826189 - 22826016
Alignment:
| Q |
493 |
gaatatgatggagtgaagaaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttatcattgaacaaagatctttctt |
592 |
Q |
| |
|
||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| || |
|
|
| T |
22826189 |
gaatatgatggtgaaaataaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttttcattgaccagagatcttcctc |
22826090 |
T |
|
| Q |
593 |
caattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
||||| | |||| |||||||||||||||||||||||| | || |||||| || | |||||||||||||||||| |
|
|
| T |
22826089 |
caattttgaacaatagtatgtatgttggattctcatcagctactggttcagttttcacttctcattatattctt |
22826016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 134 - 295
Target Start/End: Complemental strand, 22805605 - 22805444
Alignment:
| Q |
134 |
gtgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatg |
233 |
Q |
| |
|
|||| ||||||||||| ||||||||||| |||||||||| | || | | ||| | ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22805605 |
gtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccaccttttactggccatggaattgtttttgttctttctccaacaaaagg |
22805506 |
T |
|
| Q |
234 |
gttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaaca |
295 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||| || ||||| || ||||||||||||| |
|
|
| T |
22805505 |
gctaccaaattcactaccaaatcaataccttggtctctttaatgattccaacaatggaaaca |
22805444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 549 - 666
Target Start/End: Complemental strand, 22885500 - 22885383
Alignment:
| Q |
549 |
taaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattcta |
648 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||| |||| || |||| ||| ||||||||||||||||||||||||||||| | |||| || |
|
|
| T |
22885500 |
taaaccaacacaacctttgttatcattgaccaaagatctttctccaatactcaacaatagaatgtatgttggattctcatcttcaacagggttaattgta |
22885401 |
T |
|
| Q |
649 |
acttctcattatattctt |
666 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
22885400 |
gcttctcattatattctt |
22885383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 493 - 666
Target Start/End: Complemental strand, 22858402 - 22858217
Alignment:
| Q |
493 |
gaatatgatggagtgaagaaaaagattgatgttactttagctccaattaat------------gttgttaaaccaaaacaacctttgttatcattgaaca |
580 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| || ||||||||||||||| | | |
|
|
| T |
22858402 |
gaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaatgttgttaaaccagcacgacctttgttatcattcacga |
22858303 |
T |
|
| Q |
581 |
aagatctttcttcaattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
||||||||||| ||||||| |||| ||| |||||||||||||||||||||||||| || |||| || |||| |||||||||||| |
|
|
| T |
22858302 |
aagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggtaattgtagcttcccattatattctt |
22858217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 496 - 666
Target Start/End: Complemental strand, 22880528 - 22880349
Alignment:
| Q |
496 |
tatgatggagtgaagaaaaagattgatgttactttagctccaattaatgttgtt---------aaaccaaaacaacctttgttatcattgaacaaagatc |
586 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||| |||| ||||| | ||||||| || || |||||| ||||||| |||||||| |
|
|
| T |
22880528 |
tatgatggagtgaagaaaaagattgaggttacattagctccgattagtgttggttttaataataaaccaacacgacatttgttgtcattgaccaaagatc |
22880429 |
T |
|
| Q |
587 |
tttcttcaattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||||| |||||||||||| | | |||| || ||||||||||| ||||| |
|
|
| T |
22880428 |
tttctccaattctcaacaatagtatgtatgttggattatcatcttcaacaaggttaattttagcttctcattatgttctt |
22880349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 134 - 429
Target Start/End: Complemental strand, 22885888 - 22885595
Alignment:
| Q |
134 |
gtgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatg |
233 |
Q |
| |
|
|||| ||||||||||| |||| || | | ||||| ||||||||| | | ||| | || ||||||||||||||||||||||||| |||| || |||||| | |
|
|
| T |
22885888 |
gtgtgtcttctttctcaactaattctttatttgctataaaatcttaatatccaactcatagtggccatggaattgtttttgttatttcacctacaaaagg |
22885789 |
T |
|
| Q |
234 |
gttaccaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactatt |
333 |
Q |
| |
|
| ||||||||||||||| | | ||||||||||||| | || | || ||||||||||||| | | ||||||||||||| | |||||||| ||| | |
|
|
| T |
22885788 |
gctaccaaattcactacaatattaataccttggtctct--aacaattccaacaatggaaacagtagcagccatgtttttggtattgagcttgacactgat |
22885691 |
T |
|
| Q |
334 |
atgaatacggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgat |
429 |
Q |
| |
|
||| ||||| ||||| |||||||| |||||| |||| ||||||||||||| ||||||||||| || || || | ||||||||||||||| |
|
|
| T |
22885690 |
caaaattttgagtttgatgaaatcaatgataaccatattggtattgatatcaatgatttgaaatcagctaattcaactcctgcaggatattatgat |
22885595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 141 - 269
Target Start/End: Complemental strand, 22880853 - 22880725
Alignment:
| Q |
141 |
ttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatggttacca |
240 |
Q |
| |
|
||||||||| ||||||||||| |||||||| |||||| || | | | | ||||||||||| ||||||||||| |||| ||||||||| || ||||| |
|
|
| T |
22880853 |
ttctttctcaactacttttgtatttgccatcaaatctaggtatacagctacttgtggccatggacttgtttttgttgtttcaccaacaaaagggctacca |
22880754 |
T |
|
| Q |
241 |
aattcactaccaagtcaataccttggtct |
269 |
Q |
| |
|
||||| ||||||||| ||||||||||||| |
|
|
| T |
22880753 |
aattcgctaccaagtaaataccttggtct |
22880725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 22840447 - 22840366
Alignment:
| Q |
26 |
cctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagttttcaa |
107 |
Q |
| |
|
|||||| ||| ||||||||| | ||||||||| ||| |||| |||| || || |||||||||||||| |||||||||||||| |
|
|
| T |
22840447 |
cctcaactggcttactaagactcaccaatgatacaaaacaagaaaaaggacaagctttctatccaaatcctatagttttcaa |
22840366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 22894343 - 22894261
Alignment:
| Q |
22 |
ttaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagtttt |
104 |
Q |
| |
|
|||||||| ||||| ||||||||| | |||||||| | | |||| |||| | ||||||||||||||||||||||||||||| |
|
|
| T |
22894343 |
ttaacctccaatggcttactaagactcaccaatgacaccaaacaagaaaaagcacatgctttctatccaaaccctatagtttt |
22894261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 22842345 - 22842267
Alignment:
| Q |
237 |
accaaattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggt |
315 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| || || | || ||||||||||| | | ||||||||||||||| |
|
|
| T |
22842345 |
accaaattcactaccaggtcaataccttggtctctttaacaattccaacaatggaaatagtagcaaccatgtttttggt |
22842267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 22805708 - 22805623
Alignment:
| Q |
22 |
ttaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagttttcaa |
107 |
Q |
| |
|
||||||||| |||| |||||||| | ||||||||| || |||| || |||||||||||||||||||| || ||||||||||| |
|
|
| T |
22805708 |
ttaacctcagatggcatactaagactcaccaatgatacagaacaagtaataggtcatgctttctatccaaatccaatagttttcaa |
22805623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 22810043 - 22809958
Alignment:
| Q |
22 |
ttaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagttttcaa |
107 |
Q |
| |
|
|||||| || |||| ||||||||| | ||||||||| || ||| |||| || ||||||||||||||||| ||| |||||||||| |
|
|
| T |
22810043 |
ttaaccccagatggcttactaagactcaccaatgatacagaacatgaaaaaggacatgctttctatccaaatcctgtagttttcaa |
22809958 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 22842563 - 22842478
Alignment:
| Q |
22 |
ttaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagttttcaa |
107 |
Q |
| |
|
||||||||| ||| |||| |||| | ||||||||| ||| |||| | || ||||||||||| |||||||| || ||||||||||| |
|
|
| T |
22842563 |
ttaacctcaggtggcttaccaagactcaccaatgatacaaaacaatacaaaggtcatgctttatatccaaaaccaatagttttcaa |
22842478 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 22876315 - 22876230
Alignment:
| Q |
22 |
ttaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagttttcaa |
107 |
Q |
| |
|
|||||||||||||| ||||||| | | ||||||||| || | | |||| || |||| |||||||||||| |||||||||||||| |
|
|
| T |
22876315 |
ttaacctcaaatggcttactaaaactcaccaatgatacagaatatgaaaaaggacatggtttctatccaaatcctatagttttcaa |
22876230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 22898662 - 22898577
Alignment:
| Q |
22 |
ttaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatccaaaccctatagttttcaa |
107 |
Q |
| |
|
|||||||| ||||| ||||| ||| | ||||||||| | | ||| |||| | ||||||||||||||||| |||||||||||||| |
|
|
| T |
22898662 |
ttaacctccaatggcttacttagactcaccaatgataccaagcaagaaaaagcacatgctttctatccaaatcctatagttttcaa |
22898577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 22858710 - 22858670
Alignment:
| Q |
139 |
tcttctttctctactacttttgtttttgccataaaatctga |
179 |
Q |
| |
|
||||||||||| ||||||||| | ||||||||||||||||| |
|
|
| T |
22858710 |
tcttctttctcaactacttttttatttgccataaaatctga |
22858670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 117; Significance: 3e-59; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 141 - 666
Target Start/End: Original strand, 21150425 - 21150956
Alignment:
| Q |
141 |
ttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggccatggaattgtttttgttctttctccaacaaaatggttacca |
240 |
Q |
| |
|
|||||| || ||||||||||| |||||||||| | || | | ||| | |||| ||||||||||||||||||||||| ||||||| |||||| | ||||| |
|
|
| T |
21150425 |
ttctttttcaactacttttgtatttgccataagacctcaatatccaactcttggtggccatggaattgtttttgttatttctcctacaaaagagctacca |
21150524 |
T |
|
| Q |
241 |
aattcactaccaagtcaataccttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactattatgaata |
340 |
Q |
| |
|
||||||||||||| |||||||||||||| || || | || ||||||||||||| | ||||||||||||||| | |||||||| ||| || || |
|
|
| T |
21150525 |
aattcactaccaacacaataccttggtctctttaacaattccaacaatggaaacagtagcaaccatgtttttggtgttgagcttgacactgttcaagatt |
21150624 |
T |
|
| Q |
341 |
cggagttcgatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatcagagaaatcggcttcagcaggatattatgatattgatggtaa |
440 |
Q |
| |
|
||||| |||||||||||| | ||||||||||| ||||||||||||| ||||||||||| || || |||| ||||| |||||||| |||| | | |
|
|
| T |
21150625 |
ttgagtttgatgatatcaataataaccatgttggtattgatatcaatgatttgaaatcagctaactcaacttctgcaggctattatga---tgataatga |
21150721 |
T |
|
| Q |
441 |
tgagttcaagaatttgagcctttttagtggcttaccaatgcaaatttggttggaatatgatggagtgaagaaaaagattgatgttactttagctccaatt |
540 |
Q |
| |
|
|| ||||| |||| |||||| ||||| | || ||||| | ||| | ||||||||||| | ||||| |||||| |||||||||||||||||||| |
|
|
| T |
21150722 |
tggattcaatgatttatcccttttcagtggatatcctatgcatgtatggattgaatatgatggtgaaaagaagaagattaatgttactttagctccaatt |
21150821 |
T |
|
| Q |
541 |
aatgttgtt---------aaaccaaaacaacctttgttatcattgaacaaagatctttcttcaattcttaacactagtatgtatgttggattctcatctt |
631 |
Q |
| |
|
| ||||| | |||||| | ||||||||||||||||| ||||||||||||| || |||| |||| |||||||||||||||||||||||||| |
|
|
| T |
21150822 |
agtgttggttttaataaaaaaccagcaagacctttgttatcattgaccaaagatctttctccagttctcaacaatagtatgtatgttggattctcatctt |
21150921 |
T |
|
| Q |
632 |
caacaggttcaattctaacttctcattatattctt |
666 |
Q |
| |
|
||||||| | | || | ||||||||||||||||| |
|
|
| T |
21150922 |
caacagggttacttgcagcttctcattatattctt |
21150956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 380
Target Start/End: Original strand, 3741442 - 3741560
Alignment:
| Q |
262 |
cttggtctattcaatgactcaaacaatggaaacaacaataaccatgtttttggtttggagcttgatactattatgaatacggagttcgatgatatcaatg |
361 |
Q |
| |
|
|||||||| || ||| ||||||||||||||| ||| ||||||||||||||| | ||| ||||| | |||||||| ||||| |||||||||||| |
|
|
| T |
3741442 |
cttggtctttttaatctctcaaacaatggaaattccaacaaccatgtttttggtgttgagtttgatgtttttatgaatcaagagtttaatgatatcaatg |
3741541 |
T |
|
| Q |
362 |
acaaccatgttggaattga |
380 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3741542 |
ctaaccatgttggaattga |
3741560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 15628327 - 15628278
Alignment:
| Q |
349 |
gatgatatcaatgacaaccatgttggaattgatatcaatggtttgaaatc |
398 |
Q |
| |
|
|||||||| ||||| ||||||||||| || || ||||||||||||||||| |
|
|
| T |
15628327 |
gatgatattaatgataaccatgttggtatagacatcaatggtttgaaatc |
15628278 |
T |
|
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