View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5887-Insertion-11 (Length: 270)
Name: NF5887-Insertion-11
Description: NF5887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5887-Insertion-11 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 8 - 265
Target Start/End: Original strand, 979857 - 980121
Alignment:
| Q |
8 |
aagatatttactaaatatctttgtatatctcgttaaataattaaccattcaga---attatttcttttctgacattatttaaaatttagcaagatattac |
104 |
Q |
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| T |
979857 |
aagatatttactaaatatctttgtatatcttgttaaataattaaccattcaaatcaattatttcttttttgacattatttaaaatttagcaagatattac |
979956 |
T |
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| Q |
105 |
attaaggatgaaattgaagatggagtatgtatagtctaacatatgttaactcatctaatatcacggacagatagttttattaataaacacgaataggttt |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | | ||||||||||||| |||||||||||||||| |
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| T |
979957 |
attaaggatgaaattgaagatggagtatgtatagtctaacatgtgttaactcattcaatatcacgaatatatagttttattaacaaacacgaataggttt |
980056 |
T |
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| Q |
205 |
taaaaaagaaagttaagggttc-----aaaccagataaactaacatataatcactgtcttgttaat |
265 |
Q |
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| T |
980057 |
t-aaaaagaaagttaagggttcaaattaaaccaaataaactaacatataatcactgtcttgttaat |
980121 |
T |
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