View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5887_low_33 (Length: 238)

Name: NF5887_low_33
Description: NF5887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5887_low_33
NF5887_low_33
[»] chr5 (15 HSPs)
chr5 (106-238)||(41334571-41334703)
chr5 (112-238)||(2614563-2614689)
chr5 (106-238)||(18034042-18034174)
chr5 (105-238)||(5257055-5257188)
chr5 (105-238)||(33801529-33801662)
chr5 (131-238)||(22512365-22512472)
chr5 (104-238)||(7617193-7617327)
chr5 (104-204)||(25914902-25915002)
chr5 (112-238)||(38470639-38470765)
chr5 (104-211)||(39122262-39122369)
chr5 (131-237)||(39122366-39122472)
chr5 (106-178)||(30622627-30622699)
chr5 (107-178)||(32473303-32473374)
chr5 (132-195)||(6679724-6679788)
chr5 (132-195)||(28177801-28177865)
[»] chr8 (25 HSPs)
chr8 (105-238)||(36743390-36743523)
chr8 (112-238)||(11582826-11582952)
chr8 (107-238)||(42197344-42197475)
chr8 (112-238)||(29705422-29705548)
chr8 (106-238)||(2547056-2547188)
chr8 (106-238)||(9241612-9241744)
chr8 (104-236)||(30912468-30912600)
chr8 (112-238)||(2165877-2166003)
chr8 (104-238)||(20148820-20148954)
chr8 (110-238)||(29800862-29800990)
chr8 (106-237)||(31384725-31384856)
chr8 (104-238)||(30660648-30660782)
chr8 (107-238)||(26125695-26125825)
chr8 (105-238)||(45397376-45397508)
chr8 (106-237)||(3743832-3743963)
chr8 (129-238)||(5754963-5755072)
chr8 (106-238)||(42295255-42295386)
chr8 (104-238)||(1375602-1375736)
chr8 (106-235)||(40528542-40528671)
chr8 (104-178)||(34304908-34304981)
chr8 (106-178)||(10678060-10678132)
chr8 (105-178)||(35181636-35181709)
chr8 (106-178)||(33629901-33629973)
chr8 (202-238)||(42699317-42699353)
chr8 (106-178)||(19386473-19386545)
[»] scaffold0038 (1 HSPs)
scaffold0038 (104-238)||(112715-112849)
[»] chr4 (39 HSPs)
chr4 (104-238)||(27550369-27550503)
chr4 (104-238)||(28982728-28982862)
chr4 (106-238)||(35017792-35017924)
chr4 (105-238)||(23036040-23036173)
chr4 (106-238)||(33703201-33703333)
chr4 (104-238)||(1771172-1771306)
chr4 (106-238)||(25051753-25051885)
chr4 (106-238)||(27893750-27893882)
chr4 (106-236)||(43514594-43514724)
chr4 (104-238)||(55966252-55966386)
chr4 (104-238)||(27864624-27864758)
chr4 (105-238)||(31680962-31681095)
chr4 (106-238)||(43949709-43949841)
chr4 (106-238)||(51512173-51512305)
chr4 (104-238)||(43735802-43735936)
chr4 (106-238)||(23204686-23204818)
chr4 (109-238)||(48463361-48463490)
chr4 (112-238)||(12497016-12497142)
chr4 (124-238)||(39631161-39631275)
chr4 (110-238)||(45490225-45490353)
chr4 (105-238)||(27316619-27316753)
chr4 (104-235)||(28988536-28988666)
chr4 (104-237)||(21687067-21687200)
chr4 (105-238)||(56215805-56215937)
chr4 (111-235)||(41848034-41848158)
chr4 (104-238)||(41878466-41878593)
chr4 (118-238)||(46412389-46412509)
chr4 (133-235)||(41327478-41327580)
chr4 (11-91)||(48187484-48187566)
chr4 (105-178)||(19880074-19880147)
chr4 (106-178)||(55272284-55272356)
chr4 (107-178)||(35037125-35037195)
chr4 (104-178)||(17619058-17619132)
chr4 (110-178)||(712080-712148)
chr4 (106-178)||(48435487-48435559)
chr4 (104-178)||(46827612-46827686)
chr4 (104-144)||(32728511-32728551)
chr4 (108-154)||(960753-960799)
chr4 (105-178)||(3756159-3756232)
[»] chr3 (27 HSPs)
chr3 (104-238)||(36150190-36150324)
chr3 (104-238)||(42394325-42394459)
chr3 (106-238)||(24688310-24688442)
chr3 (106-238)||(40808925-40809057)
chr3 (106-238)||(54237156-54237288)
chr3 (105-238)||(46941113-46941246)
chr3 (106-238)||(40480809-40480941)
chr3 (106-238)||(53581766-53581898)
chr3 (105-238)||(52629888-52630021)
chr3 (104-238)||(54246054-54246188)
chr3 (105-238)||(25413741-25413874)
chr3 (104-238)||(47190932-47191066)
chr3 (106-238)||(45126836-45126968)
chr3 (114-238)||(42100748-42100872)
chr3 (106-238)||(27748623-27748746)
chr3 (104-204)||(1078312-1078412)
chr3 (104-238)||(53273599-53273724)
chr3 (154-238)||(51249368-51249452)
chr3 (104-196)||(29556865-29556956)
chr3 (104-184)||(19148882-19148962)
chr3 (104-238)||(11064628-11064762)
chr3 (106-178)||(9434244-9434316)
chr3 (106-178)||(51757713-51757784)
chr3 (104-178)||(4190171-4190245)
chr3 (106-168)||(54429173-54429235)
chr3 (132-194)||(26141543-26141606)
chr3 (104-178)||(10457798-10457872)
[»] chr2 (28 HSPs)
chr2 (104-238)||(19047217-19047351)
chr2 (104-238)||(30838692-30838826)
chr2 (105-237)||(4764633-4764765)
chr2 (104-238)||(43490307-43490441)
chr2 (107-238)||(42849768-42849898)
chr2 (106-238)||(43335671-43335803)
chr2 (106-238)||(1750474-1750606)
chr2 (112-238)||(12302167-12302293)
chr2 (106-238)||(16096807-16096940)
chr2 (104-235)||(34817682-34817813)
chr2 (139-238)||(13780676-13780775)
chr2 (112-238)||(42026829-42026955)
chr2 (105-238)||(39149201-39149332)
chr2 (156-237)||(8896541-8896622)
chr2 (104-178)||(34895647-34895721)
chr2 (106-178)||(11825562-11825634)
chr2 (104-178)||(6518400-6518474)
chr2 (104-178)||(18491825-18491899)
chr2 (104-178)||(41281880-41281954)
chr2 (106-178)||(966742-966814)
chr2 (106-178)||(43114677-43114749)
chr2 (106-170)||(12415368-12415432)
chr2 (106-170)||(12427428-12427492)
chr2 (106-178)||(16804088-16804160)
chr2 (106-178)||(16843370-16843442)
chr2 (104-178)||(12531569-12531643)
chr2 (106-178)||(4299328-4299400)
chr2 (132-194)||(40613913-40613976)
[»] chr7 (29 HSPs)
chr7 (106-238)||(41861736-41861868)
chr7 (112-238)||(24000926-24001052)
chr7 (112-238)||(42538345-42538471)
chr7 (104-237)||(16180263-16180396)
chr7 (110-238)||(5015455-5015583)
chr7 (104-238)||(5810830-5810964)
chr7 (112-238)||(32029731-32029857)
chr7 (112-238)||(42972912-42973038)
chr7 (104-238)||(44326238-44326372)
chr7 (105-238)||(44416841-44416974)
chr7 (106-238)||(26898310-26898442)
chr7 (106-238)||(43343532-43343664)
chr7 (104-238)||(45326080-45326214)
chr7 (105-238)||(4638106-4638239)
chr7 (112-238)||(27393174-27393300)
chr7 (104-238)||(35069781-35069915)
chr7 (124-238)||(38160505-38160619)
chr7 (106-237)||(10573810-10573941)
chr7 (112-238)||(9216361-9216487)
chr7 (106-238)||(43317503-43317635)
chr7 (106-238)||(5194139-5194271)
chr7 (104-218)||(47279630-47279744)
chr7 (157-237)||(24280555-24280635)
chr7 (105-178)||(40237039-40237112)
chr7 (104-178)||(31408539-31408613)
chr7 (104-178)||(33384991-33385065)
chr7 (104-178)||(27535137-27535211)
chr7 (104-178)||(31513407-31513481)
chr7 (132-176)||(35522902-35522947)
[»] chr6 (18 HSPs)
chr6 (110-238)||(7292807-7292935)
chr6 (112-238)||(9698247-9698373)
chr6 (104-238)||(21279989-21280123)
chr6 (104-238)||(26669915-26670049)
chr6 (107-238)||(13743130-13743261)
chr6 (107-238)||(13748630-13748761)
chr6 (112-238)||(7367609-7367735)
chr6 (106-238)||(30736042-30736174)
chr6 (104-238)||(3213460-3213594)
chr6 (105-238)||(21293584-21293717)
chr6 (106-238)||(24203895-24204027)
chr6 (104-236)||(26466861-26466993)
chr6 (104-238)||(7273241-7273375)
chr6 (107-237)||(30014404-30014534)
chr6 (106-178)||(33242523-33242595)
chr6 (104-178)||(27441662-27441736)
chr6 (105-178)||(33254034-33254107)
chr6 (104-178)||(31109128-31109202)
[»] chr1 (24 HSPs)
chr1 (106-238)||(5489836-5489968)
chr1 (106-238)||(48498870-48499002)
chr1 (106-238)||(43570994-43571126)
chr1 (104-238)||(7447885-7448019)
chr1 (105-238)||(4401388-4401521)
chr1 (107-238)||(37814838-37814969)
chr1 (104-238)||(24769405-24769539)
chr1 (106-238)||(23989431-23989563)
chr1 (104-238)||(750211-750345)
chr1 (105-238)||(50448167-50448300)
chr1 (105-238)||(2497469-2497602)
chr1 (105-238)||(4888103-4888235)
chr1 (106-178)||(35000021-35000093)
chr1 (104-178)||(35003414-35003488)
chr1 (104-178)||(44112797-44112871)
chr1 (106-178)||(45705945-45706017)
chr1 (109-178)||(48119748-48119817)
chr1 (106-178)||(45639640-45639712)
chr1 (104-178)||(26585582-26585656)
chr1 (104-178)||(38113101-38113175)
chr1 (105-175)||(45427652-45427722)
chr1 (105-178)||(41065271-41065344)
chr1 (132-195)||(45044570-45044634)
chr1 (126-178)||(46168503-46168555)
[»] scaffold0119 (1 HSPs)
scaffold0119 (104-238)||(745-879)
[»] scaffold0187 (2 HSPs)
scaffold0187 (106-238)||(14097-14228)
scaffold0187 (106-238)||(24425-24556)
[»] scaffold0385 (1 HSPs)
scaffold0385 (106-238)||(11311-11443)
[»] scaffold0157 (1 HSPs)
scaffold0157 (112-238)||(23335-23461)
[»] scaffold0003 (1 HSPs)
scaffold0003 (104-178)||(45625-45699)
[»] scaffold0100 (1 HSPs)
scaffold0100 (112-163)||(35370-35421)


Alignment Details
Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 41334571 - 41334703
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41334571 gagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 41334670  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  41334671 agtgtggttgtgagatgaacttaccaaaatatc 41334703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 2614563 - 2614689
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2614563 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 2614662  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||    
T  2614663 gttgtgagatgaacttaccaaaatatc 2614689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 18034174 - 18034042
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18034174 gagtgatgatacatgtaccaccccatatggcaatacaccctttacacccatataaaattctgacacgtggcaacctggaccccacacaaatagaagataa 18034075  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||| ||||||||    
T  18034074 agtgtggttgtgagatgaacttacaaaaatatc 18034042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 5257188 - 5257055
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| ||||||| || ||||||||| ||||||||||||    
T  5257188 agagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagata 5257089  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||| |||||||||||||    
T  5257088 aagtgtggttgtgagatgaaattaccaaaatatc 5257055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 33801662 - 33801529
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||| |||||||  |||||||||||||||||  |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  33801662 agagtgatgatatatgtaccttcccatgtggcaatacactctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagata 33801563  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||| ||||||||    
T  33801562 aagtgtggttgtgagatgaacttactaaaatatc 33801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 22512472 - 22512365
Alignment:
Q  131 tgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 230  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22512472 tgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 22512373  T
Q  231 aaaatatc 238  Q
    ||||||||    
T  22512372 aaaatatc 22512365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 7617327 - 7617193
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||| ||||||||||||||||||||| |||||||| | |||||||||||||| ||| |||| | || |||||| |||||||||||    
T  7617327 aagagtgatgatacatgtatcaccccatgtggcaatacaccttttacaccaacacaaaattctgacatgtgacaacttagatcccacataaatagaagat 7617228  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  7617227 aaagtgtggttgtgagatgaacttaccaaaatatc 7617193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 25914902 - 25915002
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25914902 aagagtgatgatacatgtaccacctcatgtggcaatacaccatttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 25915001  T
Q  204 a 204  Q
    |    
T  25915002 a 25915002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 38470765 - 38470639
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    |||||||||||||||| ||| |||||||||||| |||||||||| | |||||||||| |||||| || |||||||||||| |||||||||||||||||||    
T  38470765 tgatacatgtaccacctcatatggcaatacaccctttacacccacataaaattctgatacgtggtaatctggaccccacataaatagaagataaagtgtg 38470666  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
     |||||| ||||| |||||||||||||    
T  38470665 attgtgaaatgaatttaccaaaatatc 38470639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 211
Target Start/End: Original strand, 39122262 - 39122369
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||| ||| |||| ||||||||| ||||||||||  ||||||||||||||||||||    
T  39122262 aagagtggtgatacatgtaccaccccatgtgacaatatatcatttacatccacacaagattctgacatgtggcaacctaaaccccacacaaatagaagat 39122361  T
Q  204 aaagtgtg 211  Q
    ||||||||    
T  39122362 aaagtgtg 39122369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 39122366 - 39122472
Alignment:
Q  131 tgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 230  Q
    |||| ||||| | |||||||| ||| |||| ||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  39122366 tgtgacaatatatcatttacatccacacaagattctgacatgtggcaacctaaaccccacacaaatagaagataaagtgtagttgtgagatgaatttacc 39122465  T
Q  231 aaaatat 237  Q
    |||||||    
T  39122466 aaaatat 39122472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 30622627 - 30622699
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||| |||||||| ||||| |||||||    
T  30622627 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaattttgacatgtggcaa 30622699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 32473303 - 32473374
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||  | |||||||||||||||||  ||||||||| |||||||||||||| |||||||    
T  32473303 agtggtgatacatgtacacctccatgtggcaatacacctcttacacccacacaaaattctgacatgtggcaa 32473374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 6679724 - 6679788
Alignment:
Q  132 gtggcaatacaccattt-acacccatacaaaattctgacacgtggcaacctggaccccacacaaa 195  Q
    ||||||||||||| ||| ||||||| |||||| ||||||||||||  || |||||||| ||||||    
T  6679724 gtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaa 6679788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 28177801 - 28177865
Alignment:
Q  132 gtggcaatacaccattt-acacccatacaaaattctgacacgtggcaacctggaccccacacaaa 195  Q
    ||||||||||||| ||| ||||||| |||||| ||||||||||||  || |||||||| ||||||    
T  28177801 gtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaa 28177865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 36743390 - 36743523
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36743390 agagtgatgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagata 36743489  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||||    
T  36743490 aagtgtggttgtgagatgaacttaccaaaatatc 36743523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 11582952 - 11582826
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11582952 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 11582853  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||    
T  11582852 gttgtgagatgaacttaccaaaatatc 11582826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 42197344 - 42197475
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaa 206  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  42197344 agtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaa 42197443  T
Q  207 gtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||    
T  42197444 gtgtggttgtgagatgaacttaccaaaatatc 42197475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 29705548 - 29705422
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  29705548 tgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccgcacaaatagaagataaagtgtg 29705449  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||| |||||||||    
T  29705448 gttgtgagatgaacttatcaaaatatc 29705422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 2547188 - 2547056
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  2547188 gagtgatgatacatgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagataa 2547089  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||| ||||||||    
T  2547088 agtgtggttgtgagatgaacttactaaaatatc 2547056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 9241744 - 9241612
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9241744 gagtgatgatacatgtaccaccccatgtggcaacacaccctttgcacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 9241645  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||| ||||||||    
T  9241644 agtgtggttgtgagatgaacttacaaaaatatc 9241612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 30912468 - 30912600
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  30912468 aagagtgatgatacatgtaccaccccatgtggcaatacactctttacacccacacaaaattctgacacgtggcaacctagaccccacacaaatagaagat 30912567  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaata 236  Q
    || ||| ||||||||||||||||||||||||||    
T  30912568 aaggtgcggttgtgagatgaacttaccaaaata 30912600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 2165877 - 2166003
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    |||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2165877 tgatacatgtaccatcccatgtgacaatacaccctttacacccacacaaaattctgacacgtggcaacctgaaccccacacaaatagaagataaagtgtg 2165976  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    ||| |||||||||||||||||||||||    
T  2165977 gttatgagatgaacttaccaaaatatc 2166003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 20148954 - 20148820
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||| |||||| ||||||| |||    
T  20148954 aagagtggtgatacatgtaccacaccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatgat 20148855  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  20148854 aaagtgtggttgtgagatgaacttaccaaaatatc 20148820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 29800862 - 29800990
Alignment:
Q  110 ggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtg 209  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| ||||||| || ||||||||| |||||||||||||||||    
T  29800862 ggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtg 29800961  T
Q  210 tggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||    
T  29800962 tggttgtgagatgaacttaccaaaatatc 29800990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 31384856 - 31384725
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||| ||||||||||||||||||||||| ||| |||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  31384856 gagtgatgatatatgtaccaccccatgtggcaatataccctttacatccacataaaattctgacacgtagcaacctggaccccacacaaatagaagataa 31384757  T
Q  206 agtgtggttgtgagatgaacttaccaaaatat 237  Q
    ||||||||||||||||||||||||||||||||    
T  31384756 agtgtggttgtgagatgaacttaccaaaatat 31384725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 30660648 - 30660782
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||| || || ||||||||||||||| |||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  30660648 aagagtgatgatacatgtatcatcctatgtggcaatacaccctttacatccacataaaattctgacacgtggcaacctggaccccacacaaatagaagat 30660747  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||| |||||||||||||||||||||    
T  30660748 aaagtgtggttgtaagatgaacttaccaaaatatc 30660782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 107 - 238
Target Start/End: Complemental strand, 26125825 - 26125695
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaa 206  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||  | |||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  26125825 agtggtgatatatgtaccaccccatgtggcaatacaccctttacacccgcataaaattctgacacgtggcaatctgga-cccacataaatagaagataaa 26125727  T
Q  207 gtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||    
T  26125726 gtgtggttgtgagatgaacttaccaaaatatc 26125695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 45397508 - 45397376
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  45397508 agagtgatgatacatgtaccaccc-atgtggcaacacaccctttacacccacacaaaattctgacacgtggcaatctggagcccacacaaatagaagata 45397410  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    || |||||||||||||||||||||| ||||||||    
T  45397409 aattgtggttgtgagatgaacttacaaaaatatc 45397376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 3743963 - 3743832
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||| |||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||||| ||| |||| ||| |||||||||||||    
T  3743963 gagtgatgatatatgtaccaccccatgtagcaatacaccctttacacccacataaaattctgacacgtggcaatctgaaccctacataaatagaagataa 3743864  T
Q  206 agtgtggttgtgagatgaacttaccaaaatat 237  Q
    ||||||||||||||||||||||| ||||||||    
T  3743863 agtgtggttgtgagatgaacttatcaaaatat 3743832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 5755072 - 5754963
Alignment:
Q  129 catgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaactta 228  Q
    |||| ||||||||||| |||||||||| |||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  5755072 catggggcaatacaccctttacacccacacaaaattctaacacgtggcaacttggatcccacataaatagaagataaagtgtggttgtgagatgaactta 5754973  T
Q  229 ccaaaatatc 238  Q
    ||||||||||    
T  5754972 ccaaaatatc 5754963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 42295386 - 42295255
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||| |||||||| || ||||||||||| ||| |||||| ||| |||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  42295386 gagtgatgataaatgtaccatcctatgtggcaatataccctttacatccacacaaaattctgacatgtggcaacttggaccc-acataaatagaagataa 42295288  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  42295287 agtgtggttgtgagatgaacttaccaaaatatc 42295255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 1375736 - 1375602
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||||| ||||| |||||||   |||||||||| |||| ||||| ||||||||||| ||| || |||||||||||||||||    
T  1375736 aagagtggtgatacatgtaccaccctatgtgacaatacattctttacacccacacaagattctaacacgtggcaatctgaactccacacaaatagaagat 1375637  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||| |||||||||| || |||||||||||||    
T  1375636 aaagtgtagttgtgagataaatttaccaaaatatc 1375602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 40528542 - 40528671
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    |||||||||||||||| |  || |||||| ||||| | |||||||| ||| |||||||| ||||| ||| |||| || ||||||||||||||||||| ||    
T  40528542 gagtggtgatacatgtgcaccctcatgtgacaatatatcatttacatccacacaaaattatgacatgtgacaacttgaaccccacacaaatagaagagaa 40528641  T
Q  206 agtgtggttgtgagatgaacttaccaaaat 235  Q
    |||||||||||||||| || ||| ||||||    
T  40528642 agtgtggttgtgagataaatttatcaaaat 40528671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 34304981 - 34304908
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  34304981 aagagtggtgatacatgtac-accccatgtggcaatacacctcttacacccaaacaaaatcctgacatgtggcaa 34304908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 10678060 - 10678132
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  ||||||||||||||||| |  ||||||||| ||||||| |||||| |||||||    
T  10678060 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccacacaaaatcctgacatgtggcaa 10678132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 35181709 - 35181636
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||  |  ||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  35181709 agagtggtgatacatgtacaccttcatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 35181636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 33629901 - 33629973
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||| ||||||  |||||||||||||||||||  ||||||| | |||||||| ||||| |||||||    
T  33629901 gagtggtgatatatgtacacccccatgtggcaatacacctcttacacctacacaaaattttgacatgtggcaa 33629973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 42699353 - 42699317
Alignment:
Q  202 ataaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||| ||||||||    
T  42699353 ataaagtgtggttgtgagatgaacttacaaaaatatc 42699317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 19386473 - 19386545
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  | |||||||| ||| ||||   |||||||| ||||||| |||||| |||||||    
T  19386473 gagtggtgatacatgtacatctccatgtggtaatgcacctcatacacccacacaaaatcctgacatgtggcaa 19386545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 112849 - 112715
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  112849 aagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagat 112750  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  112749 aaagtgtggttgtgagatgaacttaccaaaatatc 112715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 27550503 - 27550369
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27550503 aagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacataaatagaagat 27550404  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||| |||||||||||||||||||||    
T  27550403 aaagtgtggttgtaagatgaacttaccaaaatatc 27550369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 28982728 - 28982862
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  28982728 aagagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 28982827  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||| ||||||||||||||||||||||||||||    
T  28982828 aaagtgcggttgtgagatgaacttaccaaaatatc 28982862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 35017924 - 35017792
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35017924 gagtgatgatacatgtaccaccccatgtggcaatacatcttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataa 35017825  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  35017824 agtgtggttgtgagatgaacttaccaaaatatc 35017792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 23036173 - 23036040
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23036173 agagtgatgatacatgtaccaccccatgtggcaacacatcctttacacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagata 23036074  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||| ||||||||    
T  23036073 aagtgtggttgtgagatgaacttacaaaaatatc 23036040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 33703333 - 33703201
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  33703333 gagtgatgatacatgtaccaccccatatggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccgcacaaatagaagataa 33703234  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  33703233 agtgtggttgtgagatgaacttaccaaaatatc 33703201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 1771172 - 1771306
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||| ||||||||||| |||||||||||    
T  1771172 aagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgagacgtggcaacttggaccccacataaatagaagat 1771271  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||| ||||||||||||||||||||| |||||||||    
T  1771272 aaaatgtggttgtgagatgaacttatcaaaatatc 1771306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 25051885 - 25051753
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  25051885 gagtgatgatacatgtaccaccccacgtggcaatacatcatttacatccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataa 25051786  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||| ||||||||||||||||||||||||||    
T  25051785 agtgtgattgtgagatgaacttaccaaaatatc 25051753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 27893750 - 27893882
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| ||||||| || ||||||||| |||||||||||||    
T  27893750 gagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataa 27893849  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||| |||||||||||||    
T  27893850 agtgtggttgtgagatgaaattaccaaaatatc 27893882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 43514594 - 43514724
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43514594 gagtgatgatacatgtaccaccccatgtggcaatacactctttacatccacaaaaaattctgacacgtggcaacctagaccccacacaaatagaagataa 43514693  T
Q  206 agtgtggttgtgagatgaacttaccaaaata 236  Q
     ||||||||||||||||||||||||||||||    
T  43514694 ggtgtggttgtgagatgaacttaccaaaata 43514724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 55966252 - 55966386
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||| ||||||| || ||||||||| |||||||||||    
T  55966252 aagagtggtgatacatgtaccactccatgtggcaatacaccctttacacccacataaaattctgacaggtggcaatctagaccccacataaatagaagat 55966351  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||| |||||||||||||||||||||||||||||||    
T  55966352 aaattgtggttgtgagatgaacttaccaaaatatc 55966386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 27864758 - 27864624
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||| |||| || ||| |||||||| |||||||| ||    
T  27864758 aagagtggtgatacatgtaccaccccatgtggcaatacaccctttacatccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaat 27864659  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  27864658 aaagtgtggttgtgagatgaacttaccaaaatatc 27864624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 31681095 - 31680962
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||||||||||||||| || |||||||||||||||||| |||||||| | | |||||||||||||||||||| ||  |||||||| ||||||||||||    
T  31681095 agagtggtgatacatgtagcatcccatgtggcaatacaccctttacacctacataaaattctgacacgtggcaatctaaaccccacataaatagaagata 31680996  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||||    
T  31680995 aagtgtggttgtgagatgaacttaccaaaatatc 31680962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 43949709 - 43949841
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||   |||| ||| ||||||||||||||||    
T  43949709 gagtgatgatacatgtaccaccctatttggcaatacaccctttatacccatacaaaattctgacacgtggcatattggatcccgcacaaatagaagataa 43949808  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  43949809 agtgtggttgtgagatgaacttaccaaaatatc 43949841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 51512173 - 51512305
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||| ||||||||||| | || | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  51512173 gagtgatgatacatgtaccaccccacgtggcaatacatctttaatacccacacaaaattctgacacgtggcaacctggaccccacacaaataaaagataa 51512272  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||| | |||||||||||||||||||||    
T  51512273 agtgtggttataagatgaacttaccaaaatatc 51512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 43735936 - 43735802
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||| ||| | |||||||||||||||| |||| |||| ||||||||||||||||||    
T  43735936 aagagtgatgatacatgtaccaccccacgtggcaatacaccctttacatccacataaaattctgacacgtgacaacttggatcccacacaaatagaagat 43735837  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||| |||||||||||||||| |||||||||    
T  43735836 aaagtgtgattgtgagatgaacttatcaaaatatc 43735802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 23204686 - 23204818
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||| |||||| |||||||||||||| | | |||||||||| | |||||||||||| |||||||||||||||||||| |||||||||||||    
T  23204686 gagtgatgatacacgtaccatcccatgtggcaatatatcctttacacccacataaaattctgacatgtggcaacctggaccccacataaatagaagataa 23204785  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||| |||||||||| ||||||||    
T  23204786 agtgtggttgtgacatgaacttacaaaaatatc 23204818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 48463361 - 48463490
Alignment:
Q  109 tggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagt 208  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||| | |||||||||||| |||| || ||| |||||||| |||||||| |||||||    
T  48463361 tggtgatacatgtaccactctatgtggcaatacaccctttacacccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaataaagt 48463460  T
Q  209 gtggttgtgagatgaacttaccaaaatatc 238  Q
     |||||||||||||||||||||||||||||    
T  48463461 atggttgtgagatgaacttaccaaaatatc 48463490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 12497142 - 12497016
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||||||| ||||||||||||| ||||||||  |||||||||| |||||||||| |||||||||||  || ||| ||||||||||||||||||||||||    
T  12497142 tgatacatgcaccaccccatgtgacaatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataaagtgtg 12497043  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
     |||| |||||||||||||||||||||    
T  12497042 attgtaagatgaacttaccaaaatatc 12497016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 39631275 - 39631161
Alignment:
Q  124 caccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatga 223  Q
    ||||||||||| ||||||| | |||||||||| |||||||||||||||||| ||   || ||||||||||||||||||||||||||||||||||||||||    
T  39631275 caccccatgtgacaatacatcctttacacccacacaaaattctgacacgtgacatattgaaccccacacaaatagaagataaagtgtggttgtgagatga 39631176  T
Q  224 acttaccaaaatatc 238  Q
    |||||||||||||||    
T  39631175 acttaccaaaatatc 39631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 45490225 - 45490353
Alignment:
Q  110 ggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtg 209  Q
    |||||||||||||  |||| ||||||||||| | |||||||||||| |||| ||||||||||||||||||||||| |||  |||||||||||||||||||    
T  45490225 ggtgatacatgtagtaccctatgtggcaatatatcatttacacccacacaagattctgacacgtggcaacctggatcccgtacaaatagaagataaagtg 45490324  T
Q  210 tggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||| |||| ||| ||||    
T  45490325 tggttgtgagatgaatttactaaagtatc 45490353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 27316619 - 27316753
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaa-ttctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    |||||| |||||||| || || |||||||| ||||||||| |||||| ||| |||||| ||||||||||||||||| ||||| ||| | |||||||||||    
T  27316619 agagtgatgatacatttatcatcccatgtgacaatacaccctttacatccacacaaaaattctgacacgtggcaacttggactccaaataaatagaagat 27316718  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||| |||||||||||||||||||||||    
T  27316719 aaagtgtggttatgagatgaacttaccaaaatatc 27316753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 28988666 - 28988536
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||  || |||||| |||||||||  |||| | |||||||||||||||||  ||||||||||||||||||||||||||||||     
T  28988666 aagagtggtgatacatgtacaccctcatgtgacaatacaccccttac-ctcatacaaaattctgacatatggcaacctggaccccacacaaatagaagag 28988568  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaat 235  Q
    ||||||||||| ||||||||| ||| ||||||    
T  28988567 aaagtgtggttatgagatgaatttatcaaaat 28988536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 237
Target Start/End: Complemental strand, 21687200 - 21687067
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||| |||||||| || |||||||||||||   ||||||  || |||||||||||||||||||||||||| || ||| |||||||||||||    
T  21687200 aagagtgatgatatatgtaccaacctatgtggcaatacattctttacattcacacaaaattctgacacgtggcaacctgaactccagacaaatagaagat 21687101  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatat 237  Q
    ||||| ||||| |||||||||||||| |||||||    
T  21687100 aaagtatggttatgagatgaacttactaaaatat 21687067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 56215805 - 56215937
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||||||||||||||||  | ||||||||| |||||||  ||||||||| ||||||||||||||  | ||||||| |||||||||||||||| ||| |    
T  56215805 agagtggtgatacatgtacaccaccatgtggccatacacctcttacacccacacaaaattctgacatatagcaacctagaccccacacaaatag-agaga 56215903  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||| || || ||||||||||    
T  56215904 aagtgtggttgtgagataaattttccaaaatatc 56215937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 41848158 - 41848034
Alignment:
Q  111 gtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgt 210  Q
    |||||||||||||  |||||||||||||||||||  ||||| |||  ||||||||||||| ||| ||| ||| ||||||||||||||||||| |||||||    
T  41848158 gtgatacatgtacacccccatgtggcaatacaccccttacatccacgcaaaattctgacatgtgacaatctgaaccccacacaaatagaagagaaagtgt 41848059  T
Q  211 ggttgtgagatgaacttaccaaaat 235  Q
    ||||||| |||||| || |||||||    
T  41848058 ggttgtgcgatgaatttgccaaaat 41848034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 41878593 - 41878466
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||||     ||  |||||||  |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||     
T  41878593 aagagtggtgatacatgtaccacc-----tg--aatacactctttacaccaacacaaaattctgacacgtgacaatctggaccccacacaaatagaagag 41878501  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    || || ||||||||||||||||||| |||||||||    
T  41878500 aaggtttggttgtgagatgaacttatcaaaatatc 41878466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 238
Target Start/End: Original strand, 46412389 - 46412509
Alignment:
Q  118 atgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtg 217  Q
    ||||||||||| || || ||||| ||  |||||| | | ||||||||||||||||||||||  |  |||||||| |||||||||||||||||||||||||    
T  46412389 atgtaccaccctatatgacaatatactttttacatctacacaaaattctgacacgtggcaatttaaaccccacataaatagaagataaagtgtggttgtg 46412488  T
Q  218 agatgaacttaccaaaatatc 238  Q
    ||| |||||||||||||||||    
T  46412489 agaagaacttaccaaaatatc 46412509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 41327478 - 41327580
Alignment:
Q  133 tggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaa 232  Q
    ||||||||||||  |||||| || | |||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||    
T  41327478 tggcaatacaccccttacactcacaaaaaattctaacatgtggcaacctggaccccacacaaattgaagagaaagtgtggatgtgagatgaatttaccaa 41327577  T
Q  233 aat 235  Q
    |||    
T  41327578 aat 41327580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 48187566 - 48187484
Alignment:
Q  11 cataggtaaaccaaatagtcagtcgtacaaatacaattttaccataaataaacacaag--cttaacggactaagttcggaacg 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |  ||||   ||||||||||||||||||||||    
T  48187566 cataggtaaaccaaatagtcagtcgtacaaatacaattttaccataaacacaagcaagatattaacggactaagttcggaacg 48187484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 19880147 - 19880074
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  19880147 agagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 19880074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 55272284 - 55272356
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  55272284 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 55272356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 35037195 - 35037125
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||| || |||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  35037195 agtggtgatacatgtac-actccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 35037125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 17619058 - 17619132
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  |||||  ||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  17619058 aagagtggtgatacatgtacatccccacctggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 17619132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 712148 - 712080
Alignment:
Q  110 ggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||  | |||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  712148 ggtgatacatgtacacctccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 712080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 48435487 - 48435559
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  ||||||||| ||||||| |  ||||||||| ||||||| |||||| |||||||    
T  48435487 gagtggtgatacatgtacacccccatgtgacaatacatctcttacacccacacaaaatcctgacatgtggcaa 48435559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 46827612 - 46827686
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  | |||||||| |||||| |  ||||||||| ||||||| |||||| |||||||    
T  46827612 aagagtggtgatacatgtacacctccatgtggaaatacatctcttacacccacacaaaatcctgacatgtggcaa 46827686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 32728551 - 32728511
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacacc 144  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  32728551 aagagtggtgatacatgtacacccccatgtggcaatacacc 32728511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 960753 - 960799
Alignment:
Q  108 gtggtgatacatgtaccaccccatgtggcaatacaccatttacaccc 154  Q
    ||||||||||||||||  |||||||||||||||||||  ||||||||    
T  960753 gtggtgatacatgtacacccccatgtggcaatacacctcttacaccc 960799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 3756159 - 3756232
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||   |||||||||||||||| |  ||||||||| | |||||  ||||| |||||||    
T  3756159 agagtggtgatacatgtacactcccatgtggcaatacaactcttacacccacataaaatcatgacatgtggcaa 3756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 36150324 - 36150190
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  36150324 aagagtggtgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggactccacacaaatagaagat 36150225  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  36150224 aaagtgtggttgtgagatgaacttaccaaaatatc 36150190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 42394325 - 42394459
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42394325 aagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagat 42394424  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  42394425 aaagtgtggttgtgagatgaacttaccaaaatatc 42394459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 24688310 - 24688442
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24688310 gagtgatgatacatgtaccaccccatgtggcaatacaccatttacccccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 24688409  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  24688410 agtgtggttgtgagatgaacttaccaaaatatc 24688442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 40809057 - 40808925
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40809057 gagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 40808958  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  40808957 agtgtggttgtgagatgaacttaccaaaatatc 40808925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 54237288 - 54237156
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  54237288 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaatattctgacacgtggcaatctggaccccacacaaatagaagataa 54237189  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  54237188 agtgtggttgtgagatgaacttaccaaaatatc 54237156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 46941246 - 46941113
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  46941246 agagtgatgatacatgtaccaccccatgtggcaatacactctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagata 46941147  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||||    
T  46941146 aagtgtggttgtgagatgaacttaccaaaatatc 46941113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 40480941 - 40480809
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40480941 gagtgatgatacatgtatcaccccatgcggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggaccctacacaaatagaagataa 40480842  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  40480841 agtgtggttgtgagatgaacttaccaaaatatc 40480809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 53581766 - 53581898
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53581766 gagtgatgatacctgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 53581865  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||| |||||||||    
T  53581866 agtgtggttgtgagatgaacttatcaaaatatc 53581898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 52630021 - 52629888
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  52630021 agagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtagcaacctggaccctacataaatagaagata 52629922  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||| ||||||||    
T  52629921 aagtgtggttgtgagatgaacttacaaaaatatc 52629888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 54246054 - 54246188
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| |||||||||||||||||||||||||||||||   |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||    
T  54246054 aagagtgatgatacatgtaccaccccatgtggcaatacattctttacacccacataaaattctgacatgtggcaacctggaccccacacaaatagaagat 54246153  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||| ||||||||    
T  54246154 aaagtgtggttgtgagatgaacttacaaaaatatc 54246188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 25413874 - 25413741
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| |||||||||||||||||||| || ||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  25413874 agagtgatgatacatgtaccaccccatatgacaatacaccctttacacccacacaaaactctgacacgtggtaacctggaccccacacaaatagaagata 25413775  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||| ||||||||    
T  25413774 aagtgtggttgtgagatgaacttacaaaaatatc 25413741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 47190932 - 47191066
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||    
T  47190932 aagagtgatgatacatgtaccattccatgtggcaatacaccctttacacccacacaaaattctgacatgtggtaacttggaccccacacaaatagaagat 47191031  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||| |||||||||    
T  47191032 aaagtgtggttgtgagatgaacttatcaaaatatc 47191066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 45126836 - 45126968
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||| || |||| || |||||||||||| |||||||| ||||    
T  45126836 gagtggtgatacatgtaccactccatgtggcaatacaccctttacacccacataaaattctggcatgtggtaatctggaccccacataaatagaaaataa 45126935  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  45126936 agtgtggttgtgagatgaacttaccaaaatatc 45126968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 42100872 - 42100748
Alignment:
Q  114 atacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggt 213  Q
    |||||||||||||| ||||||||||| |||| |||||||||| | |||||||||||||||||||||||| || ||||||||||| |||||||| ||||||    
T  42100872 atacatgtaccacctcatgtggcaatgcaccctttacacccacataaaattctgacacgtggcaacctgaactccacacaaataaaagataaaatgtggt 42100773  T
Q  214 tgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||    
T  42100772 tgtgagatgaacttaccaaaatatc 42100748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 27748746 - 27748623
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    |||||||||||||||||||||||||||||||||||||||          | |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27748746 gagtggtgatacatgtaccaccccatgtggcaatacaccg---------acacaaaattctgacatgtggcaacctggaccccacacaaatagaagataa 27748656  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||| | |||||||||||||||||||||||||||    
T  27748655 agtattgttgtgagatgaacttaccaaaatatc 27748623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 1078412 - 1078312
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||||| || |||||||||||||||||    
T  1078412 aagagtgatgatacatgtaccacctcatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctgaactccacacaaatagaagat 1078313  T
Q  204 a 204  Q
    |    
T  1078312 a 1078312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 53273599 - 53273724
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| |||||||||||||| ||||||||||||||||||   |||||      |||||||||| |||||| |||||||| |||||| ||||| |||||    
T  53273599 aagagtgatgatacatgtaccatcccatgtggcaatacacc---tacac------aaaattctgatacgtggtaacctggatcccacataaataaaagat 53273689  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||| |||||||||||||||||||||||||||||    
T  53273690 aaagtatggttgtgagatgaacttaccaaaatatc 53273724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 51249452 - 51249368
Alignment:
Q  154 catacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  51249452 catacaaaattctgacatgtggcaatctggatcccacacaaatagaagagaaagtgtggttgtgagatgaatttaccaaaatatc 51249368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 29556865 - 29556956
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaat 196  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||||||||    
T  29556865 aagagtggtgatacatgtaccactacatgtggcaatacacaatttacacccatataaaa-tctgacatgtggcaacctgaaccccacacaaat 29556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 19148962 - 19148882
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctgga 184  Q
    |||| |||||| ||||||||  |||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||    
T  19148962 aagaatggtgacacatgtacacccccatgtggcaatacaccacttacacccacacaaaattctgacatatggcaacctgga 19148882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 11064628 - 11064762
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||   |   |||| |||||||||  ||||||||| |||||||| ||||| |||| || || ||||||||||||||||||||     
T  11064628 aagagtggtgatacatgtacactcttgtgtgacaatacaccccttacacccacacaaaattttgacatgtggtaatctagaccccacacaaatagaagag 11064727  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
     ||||||| || ||||||||| | | |||||||||    
T  11064728 taagtgtgattatgagatgaattaatcaaaatatc 11064762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 9434316 - 9434244
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||   ||||||||||||||||||  ||||||||| |||||||||||||| |||||||    
T  9434316 gagtggtgatacatgtacactcccatgtggcaatacacctcttacacccacacaaaattctgacatgtggcaa 9434244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 51757784 - 51757713
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||| |||||||||||||||| |||  ||||||||| ||| ||| |||||| |||||||    
T  51757784 gagtggtgatacatgtac-accccatgtggcaatatacctcttacacccacacacaatcctgacatgtggcaa 51757713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 4190171 - 4190245
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||   ||  |||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  4190171 aagagtggtgatacatgtatacccttatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 4190245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 54429173 - 54429235
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctga 168  Q
    |||||| |||||||||||  |||||| ||||||||||||  ||||||||| ||||||||||||    
T  54429173 gagtggcgatacatgtacacccccatatggcaatacacctcttacacccacacaaaattctga 54429235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 26141606 - 26141543
Alignment:
Q  132 gtggcaatacaccattta-cacccatacaaaattctgacacgtggcaacctggaccccacacaa 194  Q
    ||||||||||||| |||| |||||| |||||| ||||||||||||  || ||||||||||||||    
T  26141606 gtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaa 26141543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 10457798 - 10457872
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||| |||||||||||   || ||||||||||||||||  ||||| ||| ||||||| |||||| |||||||    
T  10457798 aagagtgttgatacatgtataccctcatgtggcaatacacctcttacatccacacaaaatcctgacatgtggcaa 10457872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 6e-61; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 19047351 - 19047217
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  19047351 aagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagat 19047252  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  19047251 aaagtgtggttgtgagatgaacttaccaaaatatc 19047217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 30838826 - 30838692
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  30838826 aagagtgatgatacatgtaccaccccatgtggcaatacaccttttacacctacacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 30838727  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  30838726 aaagtgtggttgtgagatgaacttaccaaaatatc 30838692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 4764633 - 4764765
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4764633 agagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 4764732  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatat 237  Q
    |||||||||||||||||||| ||||||||||||    
T  4764733 aagtgtggttgtgagatgaatttaccaaaatat 4764765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 43490307 - 43490441
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| || ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  43490307 aagagtgatgctacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacataaatagaagat 43490406  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||| |||||||||||||||||||||||    
T  43490407 aaagtgtggttatgagatgaacttaccaaaatatc 43490441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 42849768 - 42849898
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaa 206  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  42849768 agtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaa-ataaa 42849866  T
Q  207 gtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||| |||||||||    
T  42849867 gtgtggttgtgagatgaacttatcaaaatatc 42849898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 43335671 - 43335803
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  43335671 gagtgatgatacatgtaccaccccatgtggcaatataccttttacatccacacaaaattctgacacgtggcaacctggatcccacataaatagaagataa 43335770  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||| |||||||||||||||||||||||||||    
T  43335771 agtgtagttgtgagatgaacttaccaaaatatc 43335803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 1750606 - 1750474
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| |||||  |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1750606 gagtgatgatatttgtaccaccccatgtggcaacacaccctttacactcacacaaaattctgacacgtggcaatctggaccccacacaaatagaagataa 1750507  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||| ||||||||    
T  1750506 agtgtggttgtgagatgaacttacaaaaatatc 1750474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 12302167 - 12302293
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||||||||| ||||||||||||||||||| | |||||| ||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  12302167 tgatacatgtatcaccccatgtggcaatacatcctttacatccacacaaaattctgacacatggtaacctggaccccacataaatagaagataaagtgtg 12302266  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||| ||||||||    
T  12302267 gttgtgagatgaacttacaaaaatatc 12302293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 16096940 - 16096807
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctgga-ccccacacaaatagaagata 204  Q
    ||||| |||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||||||| | || ||||||| || |||||||||    
T  16096940 gagtgatgatacatgtaccacatcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttagacccccacataagtagaagata 16096841  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||| |||| |||||||||||    
T  16096840 aagtgtggttgtgagattaactcaccaaaatatc 16096807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 34817682 - 34817813
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||  |||||||||||||| | ||  |||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||     
T  34817682 aagagtgatgatacatgtacacccccatgtggcaatgctccccttacacccatacaaaattctgacatgtggcaacctggatcccgtacaaatagaagag 34817781  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaat 235  Q
    ||||||||||||||||||||| ||||||||||    
T  34817782 aaagtgtggttgtgagatgaatttaccaaaat 34817813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 13780676 - 13780775
Alignment:
Q  139 tacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||||    
T  13780676 tacaccctttacacctatacaaaattctgacatgtggcaacctggaccccacataaatagaagagaaagtgtggttgtgagatgaatttatcaaaatatc 13780775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 42026955 - 42026829
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||||||||||  | |||||||||||||||||  ||||||||| ||||||||||||||  | ||||||| |||||||||||||||||| | |||||||     
T  42026955 tgatacatgtacacctccatgtggcaatacaccccttacacccacacaaaattctgacatcttgcaacctagaccccacacaaatagaaaagaaagtgta 42026856  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||| || ||||||||||    
T  42026855 gttgtgagatgaatttgccaaaatatc 42026829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 39149201 - 39149332
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||| |||||| |||||||| |||||||||| |||||||| ||| |||||| ||  | ||||| ||||||||| ||||||    
T  39149201 agagtgatgatacatgtaccaccc-atgtggtaatacaccttttacacccacacaaaattatgagacgtggtaatttagaccc-acacaaataaaagata 39149298  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||| |||||| ||||||||||||||||||||    
T  39149299 aagtgtagttgtgggatgaacttaccaaaatatc 39149332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 8896541 - 8896622
Alignment:
Q  156 tacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatat 237  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  8896541 tacaaaattctgacatgtggcaacctgaacctcacacaaatagaaaagaaagtgtgattgtgagatgaatttaccaaaatat 8896622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 34895647 - 34895721
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  34895647 aagagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 34895721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 11825562 - 11825634
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  11825562 gagtggtgatacatgtacatccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 11825634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 6518400 - 6518474
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  | ||||||| ||||||||| |||||||||| ||||||| |||||| |||||||    
T  6518400 aagagtggtgatacatgtacacctccatgtgtcaatacaccttttacacccacacaaaatcctgacatgtggcaa 6518474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 18491899 - 18491825
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||| || ||| |||||||    
T  18491899 aagagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctaacatgtggcaa 18491825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 41281880 - 41281954
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  |||||| ||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  41281880 aagagtggtgatacatgtacacccccatatggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 41281954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 966742 - 966814
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  |||||||||| ||||||||  ||||||||| ||||||| |||||| |||||||    
T  966742 gagtggtgatacatgtacatccccatgtggaaatacacctcttacacccacacaaaatcctgacatgtggcaa 966814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 43114749 - 43114677
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  || ||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  43114749 gagtggtgatacatgtacaccctcatgtggcaatacacctcttacacccacacaaaatcctgacaagtggcaa 43114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 12415368 - 12415432
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgaca 170  Q
    ||||||||||||||||||   ||||||||||||||||||  ||||| ||| ||||||||||||||    
T  12415368 gagtggtgatacatgtacactcccatgtggcaatacacctcttacatccacacaaaattctgaca 12415432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 12427428 - 12427492
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgaca 170  Q
    ||||||||||||||||||   ||||||||||||||||||  ||||| ||| ||||||||||||||    
T  12427428 gagtggtgatacatgtacactcccatgtggcaatacacctcttacatccacacaaaattctgaca 12427492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 16804160 - 16804088
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  ||| || || |||||||||  ||||||||| |||||||||||||| |||||||    
T  16804160 gagtggtgatacatgtacacccctatatgacaatacacctcttacacccacacaaaattctgacatgtggcaa 16804088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 16843442 - 16843370
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  ||| || || |||||||||  ||||||||| |||||||||||||| |||||||    
T  16843442 gagtggtgatacatgtacacccctatatgacaatacacctcttacacccacacaaaattctgacatgtggcaa 16843370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 12531569 - 12531643
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||| ||||||||||||  | |||| ||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  12531569 aagagtgatgatacatgtacacctccatatggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 12531643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 4299328 - 4299400
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  |  |||||||||||||| |  ||||||||| ||||||| |||||| |||||||    
T  4299328 gagtggtgatacatgtacaccttcatgtggcaatacatctcttacacccacacaaaatcctgacatgtggcaa 4299400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 40613976 - 40613913
Alignment:
Q  132 gtggcaatacaccattt-acacccatacaaaattctgacacgtggcaacctggaccccacacaa 194  Q
    ||||||||||||| ||| ||||||| |||||| ||||||||||||| || |||||||| |||||    
T  40613976 gtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaa 40613913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 41861868 - 41861736
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41861868 gagtggtgatacatgtaccactccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccatacaaatagaagataa 41861769  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||| ||||||||||||||||    
T  41861768 agtgtggttgtgagataaacttaccaaaatatc 41861736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 24000926 - 24001052
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24000926 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 24001025  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||    
T  24001026 gttgtgagatgaacttaccaaaatatc 24001052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 42538345 - 42538471
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42538345 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 42538444  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||    
T  42538445 gttgtgagatgaacttaccaaaatatc 42538471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 104 - 237
Target Start/End: Original strand, 16180263 - 16180396
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16180263 aagagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 16180362  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatat 237  Q
    ||||||||||||||||||||| ||||||||||||    
T  16180363 aaagtgtggttgtgagatgaatttaccaaaatat 16180396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 5015583 - 5015455
Alignment:
Q  110 ggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtg 209  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5015583 ggtgatacatgtaccaccccatgtggcaatacaccttttacactcacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtg 5015484  T
Q  210 tggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||    
T  5015483 tggttgtgagatgaacttaccaaaatatc 5015455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 5810830 - 5810964
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  5810830 aagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacatgtggcaacttggaccccacacaaatagaagat 5810929  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||| |||||||||    
T  5810930 aaagtgtggttgtgagatgaacttatcaaaatatc 5810964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 32029731 - 32029857
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  32029731 tgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtg 32029830  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    ||||| ||||||| |||||||||||||    
T  32029831 gttgttagatgaatttaccaaaatatc 32029857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 42973038 - 42972912
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    |||||||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  42973038 tgatacatgtactatcctatgtggcaatacaccatttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaaatgtg 42972939  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||    
T  42972938 gttgtgagatgaacttaccaaaatatc 42972912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 44326372 - 44326238
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||| |||||| ||||||| |||    
T  44326372 aagagtggtgatacatgtaccacaccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatgat 44326273  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  44326272 aaagtgtggttgtgagatgaacttaccaaaatatc 44326238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 44416841 - 44416974
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44416841 agagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagata 44416940  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||| |||||||||    
T  44416941 aagtgtggttgtgagatgaacttatcaaaatatc 44416974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 26898310 - 26898442
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  26898310 gagtggtgatacatgtaccatcctatgtggcaatacaccttttacacccacataaaattctgacacgtggtaacctggaccccacacaaatagaatataa 26898409  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||| |||||||||||||||||||||    
T  26898410 agtgtggttgtaagatgaacttaccaaaatatc 26898442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 43343532 - 43343664
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||| ||| ||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  43343532 gagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagataa 43343631  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||| |||||||||    
T  43343632 agtgtggttgtgagatgaacttatcaaaatatc 43343664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 45326214 - 45326080
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| |||| |  |||||||||||| |||||||||||    
T  45326214 aagagtggtgatacatgtaccaccccatgtgacaatacaccatttacacccacataaaattctgacaggtggtagtctggaccccacataaatagaagat 45326115  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||| ||||||||||||||||||||||||||    
T  45326114 aaagtgtgattgtgagatgaacttaccaaaatatc 45326080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 4638106 - 4638239
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||||||||||||||||||||| | ||| ||||||||| |||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  4638106 agagtggtgatacatgtaccaccctacgtgacaatacaccctttacatccatacaagattctgacacgtggtaacctagaccccacacaaatagaagata 4638205  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||| |||||||||||||||||||||||||||||    
T  4638206 aagtatggttgtgagatgaacttaccaaaatatc 4638239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 27393174 - 27393300
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  27393174 tgatacatgtaccaccccatgtggcaatacatcctttacacccacataaaattctgacatgaggcaacctggaccccacataaatagaagataaagtgtg 27393273  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||| ||||||||    
T  27393274 gttgtgagatgaacttacaaaaatatc 27393300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 35069915 - 35069781
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| |||||||||||||| || ||||||||||| | | |||||| | | ||||||||||||||||||||||| |||||| |||| |||||||||||    
T  35069915 aagagtgatgatacatgtaccatcctatgtggcaatatatcctttacatctacacaaaattctgacacgtggcaacttggacctcacataaatagaagat 35069816  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  35069815 aaagtgtggttgtgagatgaacttaccaaaatatc 35069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 38160505 - 38160619
Alignment:
Q  124 caccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatga 223  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  38160505 caccccatgtggcaatacaccccttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtagttgtgagatga 38160604  T
Q  224 acttaccaaaatatc 238  Q
    | |||| ||||||||    
T  38160605 agttactaaaatatc 38160619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 10573941 - 10573810
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    |||||||||||||||||||||| |||||| ||||| | | |||||||||| | |||||||||| | ||||||| || ||||||||| |||||||||||||    
T  10573941 gagtggtgatacatgtaccaccgcatgtgacaatatatcctttacacccacataaaattctgatatgtggcaatcttgaccccacataaatagaagataa 10573842  T
Q  206 agtgtggttgtgagatgaacttaccaaaatat 237  Q
    ||||||||||||||||||| ||||||||||||    
T  10573841 agtgtggttgtgagatgaatttaccaaaatat 10573810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 9216487 - 9216361
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||| || |||||||||||||| ||||||||| |||||| ||| |||||||||||||| | |||||| |  ||||||||||||||||||||||| ||||    
T  9216487 tgatatatataccaccccatgtgacaatacaccttttacatccacacaaaattctgacatgcggcaacttaaaccccacacaaatagaagataaaatgtg 9216388  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||    
T  9216387 gttgtgagatgaacttaccaaaatatc 9216361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 43317635 - 43317503
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||||||||||||||||  ||   ||||||||||||||  ||||||||| |||||||||||||| ||||||| || ||||||||||||||||||||  |    
T  43317635 gagtggtgatacatgtacacccttgtgtggcaatacaccccttacacccacacaaaattctgacatgtggcaatctagaccccacacaaatagaagagta 43317536  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||| |||||||||||| ||| |||||||||    
T  43317535 agtgtgattgtgagatgaatttatcaaaatatc 43317503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 5194139 - 5194271
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    |||| |||||||||||||  ||   |||||||||||| |  ||||||||| |||||||| ||||| ||||||| || ||||||||||||||||||||  |    
T  5194139 gagtagtgatacatgtacacccttgtgtggcaatacaacccttacacccacacaaaattttgacatgtggcaatctagaccccacacaaatagaagagta 5194238  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||| |||||||||||| ||| |||||||||    
T  5194239 agtgtgattgtgagatgaatttatcaaaatatc 5194271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 47279630 - 47279744
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    |||||||||||||||||||||| ||||| || ||||||||| |||| ||||| | |||||||||| | |||| || ||||| || | | |||||||||||    
T  47279630 aagagtggtgatacatgtaccatcccatctgacaatacaccctttatacccacataaaattctgatatgtggtaatctggatcctatataaatagaagat 47279729  T
Q  204 aaagtgtggttgtga 218  Q
    |||||||||||||||    
T  47279730 aaagtgtggttgtga 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 24280555 - 24280635
Alignment:
Q  157 acaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatat 237  Q
    |||||||||||| |  ||||||| |||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  24280555 acaaaattctgatatatggcaacttggaccccacacaaatagaagagaaagtgtgattgtgagatgaatttaccaaaatat 24280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 40237112 - 40237039
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  40237112 agagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 40237039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 31408539 - 31408613
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  ||||||||| |||||||||  ||||||||| | ||||| |||||| |||||||    
T  31408539 aagagtggtgatacatgtacacccccatgtgacaatacacctcttacacccacataaaatcctgacatgtggcaa 31408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 33385065 - 33384991
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||   ||||||||| |||||||||  ||||||||||||||||| |||| | |||||||    
T  33385065 aagagtggtgatacatgtaaacccccatgtgacaatacacctcttacacccatacaaaatcctgatatgtggcaa 33384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 27535137 - 27535211
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||   | ||||||||||||||| |  ||||| ||| |||||||||||||| |||||||    
T  27535137 aagagtggtgatacatgtattcctccatgtggcaatacatctcttacatccacacaaaattctgacatgtggcaa 27535211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 31513481 - 31513407
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  ||  |||||||||||||||  ||||| | | ||||||| |||||| |||||||    
T  31513481 aagagtggtgatacatgtacacccttatgtggcaatacacctcttacatctacacaaaatcctgacatgtggcaa 31513407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 35522902 - 35522947
Alignment:
Q  132 gtggcaatacaccattta-cacccatacaaaattctgacacgtggc 176  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||    
T  35522902 gtggcaatacaccatttaacacccacacaaaaatctgacacgtggc 35522947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 7292935 - 7292807
Alignment:
Q  110 ggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtg 209  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7292935 ggtgatacatgtaccaccccatgtggcaatacaccctttacacacaaacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtg 7292836  T
Q  210 tggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||    
T  7292835 tggttgtgagatgaacttaccaaaatatc 7292807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 9698247 - 9698373
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9698247 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 9698346  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||    
T  9698347 gttgtgagatgaacttaccaaaatatc 9698373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 21280123 - 21279989
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  21280123 aagagtgatgatacatgtaccaccccatgtggcaatataccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 21280024  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||| |||||||||||||    
T  21280023 aaagtgtggttgtgagatgaatttaccaaaatatc 21279989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 26669915 - 26670049
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||| ||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  26669915 aagagcggtgatatatgtaccacctcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaagat 26670014  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  26670015 aaagtgtggttgtgagatgaacttaccaaaatatc 26670049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 13743130 - 13743261
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaa 206  Q
    |||||||||||||||||||||| ||||||||||| | | |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13743130 agtggtgatacatgtaccaccctatgtggcaatatatcctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaa 13743229  T
Q  207 gtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||    
T  13743230 gtgtggttgtgagatgaacttaccaaaatatc 13743261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 13748630 - 13748761
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaa 206  Q
    |||||||||||||||||||||| ||||||||||| | | |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13748630 agtggtgatacatgtaccaccctatgtggcaatatatcctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaa 13748729  T
Q  207 gtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||    
T  13748730 gtgtggttgtgagatgaacttaccaaaatatc 13748761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 7367735 - 7367609
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  7367735 tgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggatcccacataaatagaaaataaagtgtg 7367636  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||    
T  7367635 gttgtgagatgaacttaccaaaatatc 7367609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 30736174 - 30736042
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| |||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30736174 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 30736075  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||| ||||||||||||||||||||||||||    
T  30736074 agtgtgattgtgagatgaacttaccaaaatatc 30736042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 3213594 - 3213460
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| |||||||||||| |||||||||||    
T  3213594 aagagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagat 3213495  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||| ||||||||| ||||| |||||||||||||    
T  3213494 aaagtatggttgtgaaatgaatttaccaaaatatc 3213460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 21293584 - 21293717
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||||    
T  21293584 agagtggtgatacatgtaccacctcatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagata 21293683  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||| ||||| |||||||||||||    
T  21293684 aagtgtggttgtgaaatgaatttaccaaaatatc 21293717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 24203895 - 24204027
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||| ||||||| ||||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  24203895 gagtgatgatacatgtaccactccatgtgacaatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaatataa 24203994  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  24203995 agtgtggttgtgagatgaacttaccaaaatatc 24204027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 26466993 - 26466861
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||| |||||||||||||    
T  26466993 aagagtgatgatacatttaccaccctatgtggcaatacaccttttacacccatacaaaatcctgatacgtggcaacctgaaccccaaacaaatagaagat 26466894  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaata 236  Q
    |||||||||||||||||||||||||||||||||    
T  26466893 aaagtgtggttgtgagatgaacttaccaaaata 26466861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 7273241 - 7273375
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| |||| ||||||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  7273241 aagagtgatgatgcatgtaccaccccatgtggtaatacactctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagat 7273340  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||| ||||||||||||||||||||||||||    
T  7273341 aaagtgtgattgtgagatgaacttaccaaaatatc 7273375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 30014534 - 30014404
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaa 206  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||||||| | ||||||||||||||    
T  30014534 agtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggtaacttggaccccatataaatagaagataaa 30014435  T
Q  207 gtgtggttgtgagatgaacttaccaaaatat 237  Q
    || ||||||||||||||||||||||||||||    
T  30014434 gtatggttgtgagatgaacttaccaaaatat 30014404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 33242595 - 33242523
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  33242595 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 33242523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 27441736 - 27441662
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||   ||||||||||||||||||  ||||||||| | ||||| |||||| |||||||    
T  27441736 aagagtggtgatacatgtacacacccatgtggcaatacacctcttacacccacataaaatcctgacatgtggcaa 27441662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 33254107 - 33254034
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||||||  | ||||||||||||||||| |||| ||||| ||||||| | |||| |||||||    
T  33254107 agagtggtgatacatgtacacctccatgtggcaatacaccttttatacccacacaaaatccggacatgtggcaa 33254034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 31109128 - 31109202
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||| ||| |||||| |  ||| |||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  31109128 aagagtgttgacacatgtgcacccctatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 31109202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 5489968 - 5489836
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  5489968 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataa 5489869  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  5489868 agtgtggttgtgagatgaacttaccaaaatatc 5489836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 48498870 - 48499002
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  48498870 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataa 48498969  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  48498970 agtgtggttgtgagatgaacttaccaaaatatc 48499002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 43570994 - 43571126
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  43570994 gagtgatgatatatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataa 43571093  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  43571094 agtgtggttgtgagatgaacttaccaaaatatc 43571126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 7448019 - 7447885
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  7448019 aagagtgatgatacatgtaccattccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 7447920  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||| |||||||||    
T  7447919 aaagtgtggttgtgagatgaacttatcaaaatatc 7447885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 4401521 - 4401388
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||   ||||||||||||||||||||||||    
T  4401521 agagtgatgatacatgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcatattggaccccacacaaatagaagata 4401422  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||||    
T  4401421 aagtgtggttgtgagatgaacttaccaaaatatc 4401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 107 - 238
Target Start/End: Complemental strand, 37814969 - 37814838
Alignment:
Q  107 agtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaa 206  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  37814969 agtggtgatacatgtaccaccccatgtggcaatacaccctttacatccatataaaattctgacacgtggcaatctggaccccacataaatagaagataaa 37814870  T
Q  207 gtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||| ||||| |||||||||||||    
T  37814869 gtgtggttgtgaaatgaatttaccaaaatatc 37814838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 24769405 - 24769539
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  24769405 aagagtgatgatacatgtaccaccccatgtggcaatacactctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 24769504  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||| | |||||||||||||||||    
T  24769505 aaagtgtggttgtgataagaacttaccaaaatatc 24769539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 23989431 - 23989563
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  23989431 gagtggtgatacatgtaccaccctatatggcaatacaccctttacacccacacaagattctgacatgtggcaacctggaccccacacaaatagaagataa 23989530  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||| || |||||||||||||    
T  23989531 agtgtggttgtgagataaatttaccaaaatatc 23989563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 750211 - 750345
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  750211 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggtaacatggaccccacacaaatagaagat 750310  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||| ||||||||| ||| |||||||||    
T  750311 aaagtgtggttttgagatgaatttatcaaaatatc 750345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 50448167 - 50448300
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  50448167 agagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaacccacaaaaatagaagata 50448266  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    || ||||||||| |||||||||||| ||||||||    
T  50448267 aaatgtggttgtaagatgaacttacaaaaatatc 50448300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 2497469 - 2497602
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||||||||||||||||||| ||||||||||||||||| |||| ||||| | |||||||||||||||| ||| ||||| |||||| ||||||| ||||    
T  2497469 agagtggtgatacatgtaccacaccatgtggcaatacaccctttatacccacataaaattctgacacgtgacaatctggatcccacataaatagatgata 2497568  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||||||||||||||||||||    
T  2497569 aagtgtggttgtgagatgaacttaccaaaatatc 2497602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 4888235 - 4888103
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 204  Q
    |||||| ||||||||||||||||| ||||||||||| | | |||||| ||| |||||||||||| || ||||||  ||||| |||||||||||||| |||    
T  4888235 agagtgatgatacatgtaccaccc-atgtggcaatatatcctttacatccacacaaaattctgatacatggcaatttggacaccacacaaatagaaaata 4888137  T
Q  205 aagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    ||||||||||||||||| ||||||||||||||||    
T  4888136 aagtgtggttgtgagataaacttaccaaaatatc 4888103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 35000021 - 35000093
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  ||||||||||||||||| |  ||||||||||||||||| |||||| |||||||    
T  35000021 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccatacaaaatcctgacatgtggcaa 35000093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 35003488 - 35003414
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||| ||  |||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  35003488 aagagtggtgatacatgcacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 35003414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 44112871 - 44112797
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  |  ||||||||||||||||  ||||||||| |||||||||||||| |||||||    
T  44112871 aagagtggtgatacatgtacaccttcatgtggcaatacacctcttacacccacacaaaattctgacatgtggcaa 44112797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 45706017 - 45705945
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  | |||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  45706017 gagtggtgatacatgtacacctccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 45705945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 48119817 - 48119748
Alignment:
Q  109 tggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  48119817 tggtgatacatgtacacccccacgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 48119748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 45639640 - 45639712
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||  |||| ||||||||||||||  ||||||||| ||||||| || ||| |||||||    
T  45639640 gagtggtgatacatgtacacccccttgtggcaatacacctcttacacccacacaaaatcctaacatgtggcaa 45639712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 26585656 - 26585582
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||  ||||||| ||||||||| |  ||||| ||| ||||||| |||||| |||||||    
T  26585656 aagagtggtgatacatgtacacccccatgcggcaatacatctcttacatccacacaaaatcctgacatgtggcaa 26585582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 38113101 - 38113175
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||| |||||||  | ||||||| |||||||||  ||||||||| ||||||| |||||| |||||||    
T  38113101 aagagtggtgattcatgtacacctccatgtgacaatacacctcttacacccacacaaaatcctgacatgtggcaa 38113175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 45427652 - 45427722
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtgg 175  Q
    |||||||||||||||||||  |||||||||||||||||||  || || ||| ||||||| |||||| ||||    
T  45427652 agagtggtgatacatgtacatccccatgtggcaatacacctcttccatccacacaaaatcctgacatgtgg 45427722  T

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Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 41065344 - 41065271
Alignment:
Q  105 agagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    |||||||||||| ||||||  |||||||||||||||||||  ||||| ||  ||||||| |||||| |||||||    
T  41065344 agagtggtgatatatgtacacccccatgtggcaatacacctcttacatccgcacaaaatcctgacatgtggcaa 41065271  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 45044634 - 45044570
Alignment:
Q  132 gtggcaatacaccattt-acacccatacaaaattctgacacgtggcaacctggaccccacacaaa 195  Q
    ||||||||||||||||| |||||||||||||| ||||||| || || || |||||||| ||||||    
T  45044634 gtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaa 45044570  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 46168555 - 46168503
Alignment:
Q  126 ccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||| |  ||||||||| |||||||| ||||| |||||||    
T  46168555 ccccatgtggcaatacatctcttacacccacacaaaattatgacatgtggcaa 46168503  T

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Target: scaffold0119 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 879 - 745
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 203  Q
    ||||| ||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  879 aagagcggtgatatatgtaccacctcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaagat 780  T
Q  204 aaagtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||||    
T  779 aaagtgtggttgtgagatgaacttaccaaaatatc 745  T

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Target: scaffold0187 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 14097 - 14228
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14097 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctgga-cccacacaaatagaagataa 14195  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||| ||||||||    
T  14196 agtgtggttgtgagatgaacttacaaaaatatc 14228  T

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Target: scaffold0187; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 106 - 238
Target Start/End: Original strand, 24425 - 24556
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24425 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctgga-cccacacaaatagaagataa 24523  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||| ||||||||    
T  24524 agtgtggttgtgagatgaacttacaaaaatatc 24556  T

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Target: scaffold0385 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 11443 - 11311
Alignment:
Q  106 gagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 205  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| |||||||||||  ||||||||||||    
T  11443 gagtgatgatacatgtaccatcccatgtggcaatacactatttacacctacacaaaattctgacacgtagcaacttggaccccacatcaatagaagataa 11344  T
Q  206 agtgtggttgtgagatgaacttaccaaaatatc 238  Q
    |||||||||||||||||||||||||||||||||    
T  11343 agtgtggttgtgagatgaacttaccaaaatatc 11311  T

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Target: scaffold0157 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 23335 - 23461
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 211  Q
    ||||||||| ||||||||||||| ||||||||  |||||||||| |||||||||| |||||||||||  || ||| ||||||||||||||||||||||||    
T  23335 tgatacatgcaccaccccatgtgacaatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataaagtgtg 23434  T
Q  212 gttgtgagatgaacttaccaaaatatc 238  Q
     |||| |||||||||||||||||||||    
T  23435 attgtaagatgaacttaccaaaatatc 23461  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 45625 - 45699
Alignment:
Q  104 aagagtggtgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaa 178  Q
    ||||||||||||||||||||   ||||||||||||||||||  ||||||||| | ||||| |||||| |||||||    
T  45625 aagagtggtgatacatgtacacacccatgtggcaatacacctcttacacccacataaaatcctgacatgtggcaa 45699  T

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Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 35370 - 35421
Alignment:
Q  112 tgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaat 163  Q
    ||||||||||||  |||||||||||||||||||  |||||||||||||||||    
T  35370 tgatacatgtacacccccatgtggcaatacacctcttacacccatacaaaat 35421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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