View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5892-Insertion-10 (Length: 254)

Name: NF5892-Insertion-10
Description: NF5892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5892-Insertion-10
NF5892-Insertion-10
[»] chr3 (6 HSPs)
chr3 (25-189)||(35687491-35687653)
chr3 (9-134)||(1772452-1772577)
chr3 (9-174)||(40796152-40796315)
chr3 (9-132)||(2487705-2487828)
chr3 (9-70)||(23330074-23330135)
chr3 (101-180)||(39655282-39655359)
[»] chr2 (14 HSPs)
chr2 (9-186)||(38342522-38342696)
chr2 (9-173)||(3547077-3547239)
chr2 (9-136)||(42576523-42576650)
chr2 (9-186)||(43371467-43371639)
chr2 (9-186)||(4427835-4428010)
chr2 (9-134)||(14331438-14331563)
chr2 (9-113)||(26755664-26755766)
chr2 (9-134)||(30978836-30978963)
chr2 (21-134)||(18485573-18485684)
chr2 (9-134)||(6164526-6164656)
chr2 (22-109)||(24051696-24051781)
chr2 (9-57)||(44057785-44057833)
chr2 (13-48)||(7314764-7314799)
chr2 (76-134)||(44057860-44057919)
[»] chr4 (23 HSPs)
chr4 (9-170)||(16216673-16216832)
chr4 (9-198)||(30266322-30266509)
chr4 (9-198)||(30285679-30285866)
chr4 (9-134)||(568333-568458)
chr4 (9-197)||(21544495-21544681)
chr4 (9-180)||(18423506-18423675)
chr4 (9-195)||(29527729-29527912)
chr4 (8-173)||(1866566-1866728)
chr4 (9-198)||(10574411-10574604)
chr4 (9-172)||(45065165-45065326)
chr4 (9-200)||(31782531-31782718)
chr4 (31-186)||(14605929-14606081)
chr4 (9-113)||(41915060-41915164)
chr4 (9-179)||(31415942-31416109)
chr4 (9-111)||(30672879-30672981)
chr4 (9-126)||(11172885-11173002)
chr4 (9-134)||(24637110-24637233)
chr4 (21-186)||(47103661-47103829)
chr4 (9-183)||(15733533-15733697)
chr4 (60-134)||(15132185-15132259)
chr4 (101-189)||(26564839-26564925)
chr4 (101-180)||(6382282-6382359)
chr4 (100-195)||(12825456-12825549)
[»] chr7 (20 HSPs)
chr7 (9-186)||(31425923-31426098)
chr7 (9-180)||(18683889-18684058)
chr7 (9-173)||(32546107-32546269)
chr7 (9-179)||(29157264-29157434)
chr7 (9-189)||(29014952-29015136)
chr7 (9-189)||(30839134-30839312)
chr7 (9-113)||(42908104-42908208)
chr7 (9-171)||(28309408-28309567)
chr7 (21-189)||(27063067-27063231)
chr7 (9-198)||(21750701-21750884)
chr7 (9-134)||(37103180-37103305)
chr7 (9-134)||(43218198-43218323)
chr7 (9-113)||(2471910-2472014)
chr7 (9-76)||(27062375-27062442)
chr7 (43-186)||(44845138-44845278)
chr7 (48-186)||(22973342-22973478)
chr7 (83-180)||(27063323-27063418)
chr7 (141-189)||(2472028-2472076)
chr7 (9-56)||(22962479-22962526)
chr7 (103-180)||(25979926-25980001)
[»] scaffold0013 (2 HSPs)
scaffold0013 (9-189)||(128121-128299)
scaffold0013 (9-179)||(105479-105647)
[»] chr8 (11 HSPs)
chr8 (9-189)||(40789499-40789677)
chr8 (9-180)||(15068597-15068765)
chr8 (21-189)||(2183606-2183771)
chr8 (21-127)||(2189907-2190013)
chr8 (21-131)||(8031062-8031170)
chr8 (23-185)||(10297381-10297542)
chr8 (9-58)||(4594264-4594313)
chr8 (101-195)||(17469257-17469349)
chr8 (88-186)||(15173883-15173979)
chr8 (61-134)||(14507280-14507350)
chr8 (103-195)||(30904050-30904139)
[»] chr1 (13 HSPs)
chr1 (9-185)||(16237308-16237482)
chr1 (41-189)||(35069889-35070035)
chr1 (9-189)||(12718772-12718943)
chr1 (9-134)||(10450112-10450237)
chr1 (9-130)||(37032251-37032372)
chr1 (9-108)||(19003733-19003832)
chr1 (91-186)||(23058459-23058552)
chr1 (9-113)||(19892886-19892987)
chr1 (14-56)||(17516343-17516385)
chr1 (23-76)||(23058319-23058372)
chr1 (141-195)||(16433161-16433215)
chr1 (101-134)||(41477005-41477038)
chr1 (101-180)||(29936419-29936496)
[»] chr6 (11 HSPs)
chr6 (9-198)||(29199876-29200063)
chr6 (9-189)||(18908804-18908981)
chr6 (11-178)||(20610993-20611158)
chr6 (9-189)||(9458575-9458751)
chr6 (9-76)||(9458230-9458297)
chr6 (101-189)||(256492-256578)
chr6 (51-172)||(17546919-17547038)
chr6 (101-180)||(32053090-32053167)
chr6 (101-180)||(27738774-27738851)
chr6 (83-180)||(9458842-9458937)
chr6 (101-186)||(14410858-14410941)
[»] chr5 (12 HSPs)
chr5 (9-180)||(23045001-23045169)
chr5 (12-189)||(2681130-2681304)
chr5 (9-189)||(20634091-20634270)
chr5 (9-189)||(20650205-20650384)
chr5 (9-130)||(12915383-12915504)
chr5 (9-134)||(43523671-43523794)
chr5 (72-198)||(12712549-12712673)
chr5 (72-198)||(12773813-12773937)
chr5 (10-76)||(10834122-10834188)
chr5 (9-134)||(18116560-18116683)
chr5 (9-172)||(12250882-12251041)
chr5 (9-134)||(34259171-34259290)
[»] scaffold0059 (1 HSPs)
scaffold0059 (9-171)||(70005-70165)
[»] scaffold0015 (1 HSPs)
scaffold0015 (21-134)||(55950-56063)
[»] scaffold0008 (2 HSPs)
scaffold0008 (9-179)||(67659-67827)
scaffold0008 (9-179)||(75502-75670)
[»] scaffold0005 (1 HSPs)
scaffold0005 (31-186)||(211297-211449)
[»] scaffold0184 (1 HSPs)
scaffold0184 (11-189)||(2881-3057)
[»] scaffold0182 (1 HSPs)
scaffold0182 (9-134)||(16878-17002)
[»] scaffold0036 (1 HSPs)
scaffold0036 (102-186)||(33396-33478)


Alignment Details
Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 35687653 - 35687491
Alignment:
Q  25 caaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||| |||||||||||||| | |    
T  35687653 caaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacatttctacattcgggtagggttttggtatggatttgggatag 35687554  T
Q  125 gtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||||  ||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  35687553 gtacat--atatcacagttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactca 35687491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 1772577 - 1772452
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||| |||| |||||||||||| |||||| |    
T  1772577 atatcatgataattatcaaacaaaataacatgacatatcattatcaacccccttaacaaaaacaaaaatatggtctttctacattcgggtagggtttgtg 1772478  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||  || |||||||||||||||||    
T  1772477 tatgagttcggggtgggtacatatat 1772452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 40796315 - 40796152
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||||| || |||||||| ||||||||| ||||| ||||||| |||||||||||||    
T  40796315 atatcatgacaattatcaaaccaaataacaggacatatcattatcaacccccttaacaaaaataaaaatatgacctttctacattccggtaaggtttggg 40796216  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcgga 174  Q
    ||||  ||||||||||||||  || ||| |   ||||||||| |||| ||||||| ||||||||||    
T  40796215 tatgactttggggtgggtac--atgtatcctcattacccgtcccgtacccgtattttgaaatcgga 40796152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 2487705 - 2487828
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||| ||||| ||||||  |||| ||||||||    
T  2487705 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacatttaggtagggtttggg 2487804  T
Q  109 tatggatttggggtgggtacatat 132  Q
    ||||| || |||||||||||||||    
T  2487805 tatgggttcggggtgggtacatat 2487828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 23330074 - 23330135
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaa 70  Q
    ||||||||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  23330074 atatcatgacaattatcaaaccgaataacatgacatatcattattaaccccctcaacaaaaa 23330135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 39655359 - 39655282
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||||||||||| |||||||||||||| ||||||  || |||||||||| | || |||| || ||| ||||| ||||||    
T  39655359 ggtttgggtatgggtttggggtgggtacctatata--cctgttacccgtcccatacccgtgttttgagatcggggaaaac 39655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 6e-49; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 38342696 - 38342522
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||| |||||||||||| ||||||||    
T  38342696 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccc-ctcaacaaaaacaaaaacacgacctttctacattcgggtagggtttggg 38342598  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    ||||| || |||||||||||||  |||| || |||||||||| |||||||||||| | ||||||| ||||||||||||    
T  38342597 tatgggttcggggtgggtacat--atatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaac 38342522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 3547077 - 3547239
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||| |||||||     
T  3547077 atatcatgacaattatcaaaccaaataacatagcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttgga 3547176  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcgg 173  Q
    ||||| || ||||||||||||||||| |  | |||||||||| |||| ||||||| |||||||||    
T  3547177 tatgggttcggggtgggtacatatatct--ccgttacccgtcccgtacccgtattttgaaatcgg 3547239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 42576523 - 42576650
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||| ||||| |||||||||||| |||||| |    
T  42576523 atatcatgacaattatcaaaccaaataacatgacatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttgtg 42576622  T
Q  109 tatggatttggggtgggtacatatatat 136  Q
    ||||| ||  ||||||||||||||||||    
T  42576623 tatgggttcagggtgggtacatatatat 42576650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 43371467 - 43371639
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||   ||  |||||||| ||||||| ||||||||||||||||||||| | ||| |||||||||||| ||||||||    
T  43371467 atatcatgacaattatcaaaccaaata---tgggatatcattttcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttggg 43371563  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    ||||  ||||||||||||||  |||||| || |||||||||| |||| ||||||| | ||||||| ||||||||||||    
T  43371564 tatgagtttggggtgggtac--atatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaac 43371639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 4427835 - 4428010
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||  ||||| |||||||||||| ||||||||    
T  4427835 atatcatgatagttatcaaaccaaataacatgacatatcattatgaaccccctcaacaaaaacaaaaacataacctttctacattcgggtagggtttggg 4427934  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    ||||| || | ||||| | |  ||||||  | ||| |||||| | || |||||||||||| |||| |||||| |||||    
T  4427935 tatgggttcgaggtggatcc--atatatcaccgttgcccgtcccttacccgtattatgaagtcggggaaaacccaaac 4428010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 14331438 - 14331563
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    |||||||| || |||||||||||||||||||  |||||||||||  |||| ||||||||||||||||||||| | ||| |||||||||||| ||||||||    
T  14331438 atatcatgttaattatcaaaccaaataacatagcatatcattatataccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttggg 14331537  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||| || || ||||||||||||||    
T  14331538 tatgggttcggagtgggtacatatat 14331563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 26755664 - 26755766
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||  ||| ||||| |||||||||||| ||||||||    
T  26755664 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacctcctcaacaaaaataaaa--atgacctttttacattcgggtagggtttggg 26755761  T
Q  109 tatgg 113  Q
    |||||    
T  26755762 tatgg 26755766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 30978836 - 30978963
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactc--aacaaaaacaaaaatatggcctttgtacattcgggtaaggtttg 106  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||| || |||  || ||||| ||||| ||| ||||| |||||| ||||| ||||||    
T  30978836 atatcatgacaattatcaaaccaaataacatgacatataattatcaaacccctcataaaaaaaaaaaaaaaatgacctttctacatttgggtagggtttg 30978935  T
Q  107 ggtatggatttggggtgggtacatatat 134  Q
    ||||||| || ||||||| |||||||||    
T  30978936 ggtatgggttcggggtggatacatatat 30978963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 18485573 - 18485684
Alignment:
Q  21 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggg 120  Q
    |||||||||||||||| ||| |||| |||||||||||| || ||  |||||||||||||  ||||| | |||| ||||||||||||||||||| ||  ||    
T  18485573 ttatcaaaccaaataagatggcataccattatcaaccccctaaa--aaaacaaaaatataacctttctgcatttgggtaaggtttgggtatgggttcagg 18485670  T
Q  121 gtgggtacatatat 134  Q
    ||||||||||||||    
T  18485671 gtgggtacatatat 18485684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 6164656 - 6164526
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaa-----caaaaatatggcctttgtacattcgggtaaggt 103  Q
    ||||||||| | |||||||| ||||||||||| |||||||||||||||||  ||||||||||      ||||||||| ||||| || ||||||||| |||    
T  6164656 atatcatgacaattatcaaatcaaataacatggcatatcattatcaaccccttcaacaaaaaaaaataaaaaatatgacctttctatattcgggtagggt 6164557  T
Q  104 ttgggtatggatttggggtgggtacatatat 134  Q
     | ||||||  || |||||||||||||||||    
T  6164556 ctaggtatgagttcggggtgggtacatatat 6164526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 24051781 - 24051696
Alignment:
Q  22 tatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggt 109  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||| |  ||||| | | ||||| |||||||||||| ||| |||||    
T  24051781 tatcaaaccaaataatatggcatatcattatcaaccccctcaacaaca--aaaaaaacgacctttctacattcgggtagggtatgggt 24051696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 44057785 - 44057833
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacc 57  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||||    
T  44057785 atatcatgacaattatcaaaccaaataacatagcatatcattatcaacc 44057833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 7314799 - 7314764
Alignment:
Q  13 catgatatttatcaaaccaaataacatgacatatca 48  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7314799 catgatatttatcaaacaaaataacatgacatatca 7314764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 44057860 - 44057919
Alignment:
Q  76 atatggcctttgtacattcgggtaaggtttgggtatggatt-tggggtgggtacatatat 134  Q
    ||||| ||||| |||||||||||| ||||||||||||| ||  |||||||||||||||||    
T  44057860 atatgacctttctacattcgggtagggtttgggtatgggttcgggggtgggtacatatat 44057919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 16216832 - 16216673
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||| |||||||||||| ||||||||    
T  16216832 atatcatgataattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctacattcgggtagggtttggg 16216733  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaat 170  Q
    || || |||||||  ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  16216732 taagggtttggggaaggtacatatatct-cca-ttacccgtctcgtatccgtattatgaaat 16216673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 30266509 - 30266322
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | | ||||| ||||||| |||| ||||||||    
T  30266509 atatcatgatagttatcaaaccaaataacatgtcatatcattatcaaccctctcaacaaaaacaaaaacacgacctttctacattcaggtagggtttggg 30266410  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 198  Q
    ||||| || ||||||| |||  |||||| || ||||||||||  ||| |||||||||||||||||| ||||  ||||| || ||||||||    
T  30266409 tatgggttcggggtggatac--atatatccccgttacccgtcctgtacccgtattatgaaatcggaaaaaaaccaaacccagtcaaatcg 30266322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 30285679 - 30285866
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | | ||||| ||||||| |||| ||||||||    
T  30285679 atatcatgatagttatcaaaccaaataacatgtcatatcattatcaaccctctcaacaaaaacaaaaacacgacctttctacattcaggtagggtttggg 30285778  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 198  Q
    ||||| || ||||||| |||  |||||| || ||||||||||  ||| |||||||||||||||||| ||||  ||||| || ||||||||    
T  30285779 tatgggttcggggtggatac--atatatccccgttacccgtcctgtacccgtattatgaaatcggaaaaaaaccaaacccagtcaaatcg 30285866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 568333 - 568458
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||    
T  568333 atatcatgacaattatcaaaccaaataacatgacatatcactatcaacccccttaacaaaaacaaaaatatgacctttctacattcgggtaaggtttggg 568432  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||| || |||||||||||||||||    
T  568433 tatgggttcggggtgggtacatatat 568458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 21544495 - 21544681
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||||| ||| |||||||| ||||||||    
T  21544495 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatatgacctttctaccttcgggtagggtttggg 21544594  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatc 197  Q
    ||||| || |||||||||||  |||||| ||  ||||| ||| |||| ||||||| |||||||||  ||||  ||||| ||||||||||    
T  21544595 tatgggttcggggtgggtac--atatatccccattacctgtcccgtacccgtattttgaaatcgggaaaaatccaaacccaatcaaatc 21544681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 18423506 - 18423675
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||| ||||| |||||||||||| ||||| ||    
T  18423506 atatcaagatagttatcaaaccaaataacatgacatatcattatcaattccctcaacaaaaacaaaaacatgacctttctacattcgggtagggtttagg 18423605  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||| || ||| || ||||||||||   |  |||||||||| ||||||||||||||||||| ||| |||||    
T  18423606 tatgggttcgggatgagtacatatatcctc--gttacccgtcccgtatccgtattatgaaattggaaaaaac 18423675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 29527729 - 29527912
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||| ||||||||||  ||||||||||||||| | |||||||||||| |||||||| ||||| ||||||||| || ||||||||    
T  29527729 atatcatgacaattatcaaatcaaataacatagcatatcattatcaactccctcaacaaaaac-aaaatatgacctttctacattcggatagggtttggg 29527827  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 195  Q
    ||||| || |||||||||||  |||||| || |||||||||| |||| ||||||| ||||||||| |||||| ||||| | ||||||    
T  29527828 tatgggttcggggtgggtac--atatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaaccctatcaaa 29527912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 173
Target Start/End: Complemental strand, 1866728 - 1866566
Alignment:
Q  8 aatatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgg 107  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| || |||||||||||||  ||| ||||| ||||||||||||  ||||||    
T  1866728 aatatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctaaacaaaaacaaaac-atgacctttctacattcgggtagagtttgg 1866630  T
Q  108 gtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcgg 173  Q
    |||||| || ||||||| |||||||||  ||   |||||||||||||| ||||||| |||||||||    
T  1866629 gtatgggttcggggtggatacatatatccgca--ttacccgtctcgtacccgtattttgaaatcgg 1866566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 10574604 - 10574411
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaaca------aaaacaaaaatatggcctttgtacattcgggtaagg 102  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||      |||||||||| |||  |||| |||||||||||| ||    
T  10574604 atatcatgatagttatcaaaccaaataacatgacatatcattatcaacctcctcaacacaaataaaaacaaaaacatgatctttctacattcgggtaggg 10574505  T
Q  103 tttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 198  Q
    ||||||||||  || |||| ||||||||  |||| || |||||||||| |||| | ||||||||||||||| ||||| |||||| || ||||||||    
T  10574504 tttgggtatgagttcggggcgggtacat--atatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattcaaacccagtcaaatcg 10574411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 45065165 - 45065326
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||   ||| |||||||||||| ||||||||    
T  45065165 atatcatgacaattatcaaaccaaataacatagcatatcattatcaaccccctcaacaaaaacaaaaatatgatatttctacattcgggtagggtttggg 45065264  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcg 172  Q
    ||||  || ||| |||||||  |||||| || ||||| |||| |||| ||||||| ||||||||    
T  45065265 tatgcgttcgggatgggtac--atatatccctgttactcgtcccgtacccgtattttgaaatcg 45065326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 31782531 - 31782718
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||| ||| |||| |||||||||||| || ||  |||||||||||||  ||||| | ||||| |||||||||||||    
T  31782531 atatcatgacaattatcaaaccaaataagatggcataccattatcaaccccctaaa--aaaacaaaaatataacctttctgcattcaggtaaggtttggg 31782628  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcgag 200  Q
    ||||  ||||||||||||||  |||||| || |||||| ||  |||| ||||||| ||||||||| |||||| ||||| || ||||||||||    
T  31782629 tatgagtttggggtgggtac--atatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaaacccagtcaaatcgag 31782718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 14606081 - 14605929
Alignment:
Q  31 aaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacat 130  Q
    |||||||||| ||||||||||||||| | || || ||||||||||||||| | ||| ||||||| ||||  |||||||||||| || |||||||||||||    
T  14606081 aaataacatggcatatcattatcaactccctaaa-aaaaacaaaaatatgacatttctacattcaggtagagtttgggtatgggttcggggtgggtacat 14605983  T
Q  131 atatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
      |||| || ||||||||||||||| ||||||| |||||||||||||||| |||||    
T  14605982 --atatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaac 14605929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 41915164 - 41915060
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||| ||| ||||||||    
T  41915164 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgtgtagggtttggg 41915065  T
Q  109 tatgg 113  Q
    |||||    
T  41915064 tatgg 41915060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 31416109 - 31415942
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||  |||| |||||| |    
T  31416109 atatcatgacaattatcaaaccaactaacatggcatatcattatcaaccccctcaacaaaaataaaaatatgacctttctacatt-tggtagggtttgag 31416011  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaa 179  Q
    | ||| || |||||||||||  |||||| || |||| || || |||| ||||||| |||||||||||||||    
T  31416010 tgtgggttcggggtgggtac--atatatccctgttatccatcccgtacccgtattttgaaatcggagaaaa 31415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 30672879 - 30672981
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | | |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||| ||||||||    
T  30672879 atatcatgacaatcatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttggg 30672978  T
Q  109 tat 111  Q
    |||    
T  30672979 tat 30672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 11172885 - 11173002
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||  || ||||||||| |||||||| ||||| |||||||||| | ||||||||    
T  11172885 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacctccttaacaaaaactaaaatatgacctttctacattcgggaagggtttggg 11172984  T
Q  109 tatggatttggggtgggt 126  Q
    ||||| || |||||||||    
T  11172985 tatgggttcggggtgggt 11173002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 24637110 - 24637233
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || || ||||||||||| ||| || || ||||||| |||| ||||||||    
T  24637110 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccct-aaaaaaaacaaaaacatgacc-ttctacattcaggtagggtttggg 24637207  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||| |   ||||||| ||||||||    
T  24637208 tatgggtcctgggtgggcacatatat 24637233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 47103661 - 47103829
Alignment:
Q  21 ttatcaaaccaaataacatgacatatcattatcaacccactc-----aacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggat 115  Q
    ||||||||||||||||||| ||||||| |||||||| |  |      || ||||| |||||||||| |||  |||||||||||| ||||||||||||| |    
T  47103661 ttatcaaaccaaataacataacatatctttatcaactccttacaaaaaaaaaaaaaaaaaatatggtcttcctacattcgggtagggtttgggtatgggt 47103760  T
Q  116 ttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    | |||||||||||||||||  ||  |||||||| | |||| ||||||| |||||| || |||||| |||||    
T  47103761 tcggggtgggtacatatatccgc--gttacccgccccgtacccgtattttgaaattggggaaaacccaaac 47103829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 15733697 - 15733533
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| ||        | ||||| ||| | ||| || |||| | || |||||| |    
T  15733697 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccct--------aaaaaaaaatgacatttctatattcagctagggtttgag 15733606  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactca 183  Q
    || |  || ||||||||||||||||| |  | ||||||||||||||| ||||||| ||||||||  |||||||||    
T  15733605 tacgagttcggggtgggtacatatatct--ccgttacccgtctcgtacccgtattttgaaatcgaggaaaactca 15733533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 15132259 - 15132185
Alignment:
Q  60 ctcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatat 134  Q
    ||||||||||||||||||||| | ||| |||||| ||||| |||||  |||||| ||  ||||||| ||||||||    
T  15132259 ctcaacaaaaacaaaaatatgacatttctacatttgggtagggtttatgtatgggttcagggtgggcacatatat 15132185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 26564839 - 26564925
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||||||||||| || ||||||||||| ||||||  || |||||||||| | || |||  || ||||||||| |||| ||||||||||    
T  26564839 ggtttgggtatggtttcggggtgggtacctatata--cccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactca 26564925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 6382359 - 6382282
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||||||||||| || ||||||||||| ||||||  || |||||||||| | || |||| || ||| ||||||||||||    
T  6382359 ggtttgggtatgggttcggggtgggtacctatata--cccgttacccgtcccatacccgtgttttgagatcggagaaaac 6382282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 12825549 - 12825456
Alignment:
Q  100 aggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 195  Q
    |||||||||||| | ||  |||||||||| |||||||  | |||||||||| | || |||| || ||||||||| |||||| |||||||| |||||    
T  12825549 aggtttgggtataggttcagggtgggtacgtatatat--ccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactcagtcaaa 12825456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 31425923 - 31426098
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||| ||||||||    
T  31425923 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacctttctacattcgggtagggtttggg 31426022  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    ||||  || ||||||| |||  |||||| || |||||||||||| || ||||||| | ||||||| |||||| |||||    
T  31426023 tatgcgttcggggtggatac--atatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaaac 31426098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 18683889 - 18684058
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||| | |||||||||||| ||||||||    
T  18683889 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaacaaaaatatgacctatctacattcgggtagggtttggg 18683988  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||| || | ||||| |||  |||||| || |||||||||| |||| ||||||| ||||||||| ||||||    
T  18683989 tatgggttcgaggtggatac--atatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaac 18684058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 32546107 - 32546269
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||| ||||||||    
T  32546107 atatcatgacaattaataaaccaaataacatggcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttggg 32546206  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcgg 173  Q
    ||||| || |||||||||||  |||||| || |||||||||  |||| ||||||| |||||||||    
T  32546207 tatgggttcggggtgggtac--atatatccccgttacccgttccgtacccgtattttgaaatcgg 32546269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 29157264 - 29157434
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||| ||||| ||||| |||||| ||||||||    
T  29157264 atatcatgatagttatcaaaccaaataacatgacatattattaccaaccccctcaacaaaaacaaaaacatgacctttctacatccgggtagggtttggg 29157363  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccg--tattatgaaatcggagaaaa 179  Q
    || || ||| |||||| |||  |||||| || |||||||||||| || |||  |||||||||||||| |||||    
T  29157364 tacgggtttagggtggatac--atatatccccgttacccgtctcatacccgtatattatgaaatcggggaaaa 29157434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 29015136 - 29014952
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||| |||| ||||||| |||||| |    
T  29015136 atatcatgacaattatcaaaccaaataacatgccatataattatcaaccccctcaacaaaaacaaaaatatgacctttctacagtcgggtagggtttgag 29015037  T
Q  109 tatggatttggggtgg----gtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||| || |||||||     || |||||||| || | || ||||| |||| ||||||| |||||||||  ||||||||||||||    
T  29015036 tatgggttcggggtggatatatatatatatatccccgctatccgtcccgtacccgtattttgaaatcgggaaaaactcaaactca 29014952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 30839312 - 30839134
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| ||||||||||| ||||| || ||||||||||||||||  || |||||||||||||||||| ||||| |||||||||||||||||||||    
T  30839312 atatcatgatagttatcaaaccacataacttggcatatcattatcaaccacctaaacaaaaacaaaaatatgacctttctacattcgggtaaggtttggg 30839213  T
Q  109 tatggatttggggtgggtacatatatatgcca-gttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
     |||  || ||||| | |||||||||   ||| ||||| |||| | || ||||||| ||||||| | |||||||||||||||    
T  30839212 catgagttcggggtagatacatatat---ccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactca 30839134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 42908208 - 42908104
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||| | ||||| |||||||||||| ||||||||    
T  42908208 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatacgacctttctacattcgggtagggtttggg 42908109  T
Q  109 tatgg 113  Q
    |||||    
T  42908108 tatgg 42908104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 28309408 - 28309567
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| ||| | ||| |||||||||||| ||||||||    
T  28309408 atatcatgacaattatcaaactaaataacatgacatatcattatcaaccc-ctcaataaaaacaaaaacatgacatttctacattcgggtagggtttggg 28309506  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatc 171  Q
    ||||  || ||||| | |||  |||||| || |||||||||| |||| ||||||| |||||||    
T  28309507 tatgagttcggggtagatac--atatattcccgttacccgtcccgtacccgtattttgaaatc 28309567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 27063067 - 27063231
Alignment:
Q  21 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggg 120  Q
    |||||||||||||||| |||| |||||||||||||||| || ||  |||||||||||||| | ||| |||||||||||| ||||||||||||  || |||    
T  27063067 ttatcaaaccaaataagatgagatatcattatcaaccccctaaa--aaaacaaaaatatgacttttctacattcgggtagggtttgggtatgagttcggg 27063164  T
Q  121 gtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||| ||||  |||||| || |||| |||||  ||| ||||||| ||||||||  |||||||||||||||    
T  27063165 gtgagtac--atatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactca 27063231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 198
Target Start/End: Original strand, 21750701 - 21750884
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| |||    |||| ||||| ||| ||||| || ||||| ||| ||||||||    
T  21750701 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctc----aaaaaaaaaaaatgacctttctagattcgagtagggtttggg 21750796  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 198  Q
    ||||  || | |||||||||  |||||| || || ||||||||| |||||||||| |||||||||  |||||  |||| | |||||||||    
T  21750797 tatgagttcgaggtgggtac--atatatccccgtcacccgtctcatatccgtattttgaaatcgggaaaaacctaaacccgatcaaatcg 21750884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 37103305 - 37103180
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||| |  |||||||||||||||| ||| ||||| |||||||||||| |||||||     
T  37103305 atatcatgacaattatcaaaccaaataacatggcatatcattatcaactccgtcaacaaaaacaaaaacatgacctttctacattcgggtagggtttgga 37103206  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||  || ||| ||||| |||||||    
T  37103205 tatgtgttcgggatgggtgcatatat 37103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 43218198 - 43218323
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| | | ||||| |||||| || || ||||||||    
T  43218198 atattatgatagttatcaaaccaaataacatgtcatatcattatcaactccctcaacaaaaacaaaaacacgacctttttacatttggctagggtttggg 43218297  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||  || |||||| ||||||||||    
T  43218298 tatgagttcggggtgagtacatatat 43218323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 2471910 - 2472014
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||| || || |   ||||| |||||||||||| ||||||||    
T  2471910 atatcatgatagttatcaaaccaaataacatgatacatcattatcaaccccctcaacaaaaataagaacaccacctttctacattcgggtagggtttggg 2472009  T
Q  109 tatgg 113  Q
    |||||    
T  2472010 tatgg 2472014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 27062442 - 27062375
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaa 76  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  27062442 atatcataataattatcaaaccaaataacatgatatatcattatcaatcccctcaacaaaaacaaaaa 27062375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 44845278 - 44845138
Alignment:
Q  43 atatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagt 142  Q
    ||||||||||| |||| ||||||||||||||||  ||| ||||| |||||||||| | |||||| |||||| || |||||||||  | |||||| |   |    
T  44845278 atatcattatcgaccc-ctcaacaaaaacaaaagcatgacctttctacattcgggcagggtttgtgtatgggttcggggtgggt--aaatatatcctcat 44845182  T
Q  143 tacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    || ||||| |||| ||||||||||||||||| |||||| |||||    
T  44845181 taaccgtcccgtacccgtattatgaaatcggggaaaacccaaac 44845138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 186
Target Start/End: Original strand, 22973342 - 22973478
Alignment:
Q  48 attatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttaccc 147  Q
    ||||||||||  || |||||||||||||||||| | ||| |||||||| ||| ||||||||||||| || | |||||||||  | |||| ||  ||||||    
T  22973342 attatcaacctccttaacaaaaacaaaaatatgacatttctacattcgagtagggtttgggtatgggttcgaggtgggtac--agatatccccattaccc 22973439  T
Q  148 gtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    ||| |||| ||||||| ||||||||  |||||| |||||    
T  22973440 gtcccgtacccgtattttgaaatcgtggaaaacccaaac 22973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 27063323 - 27063418
Alignment:
Q  83 ctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    |||| |||||||||||| |||| |||||||  || |||||||||||  |||||| || |||||||||| |||| ||||||||| ||||||| ||||||    
T  27063323 ctttctacattcgggtagggttggggtatgagttcggggtgggtac--atatattcccgttacccgtcccgtacccgtattattaaatcggggaaaac 27063418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 2472028 - 2472076
Alignment:
Q  141 gttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  2472028 gttacccgtctagtacccgtattatgaaatcggaaaaaactcaaactca 2472076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 22962479 - 22962526
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaac 56  Q
    ||||||||| | |||||||| ||||||||||| |||||||||||||||    
T  22962479 atatcatgacaattatcaaatcaaataacatggcatatcattatcaac 22962526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 25980001 - 25979926
Alignment:
Q  103 tttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||||||||  ||||||||||||||||||||||  | |||||||||||| || | || || ||||||||| ||||||    
T  25980001 tttgggtatgagtttggggtgggtacatatatat--ccgttacccgtctcatacctgtgttttgaaatcggggaaaac 25979926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 128299 - 128121
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    |||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| ||||| |||||| ||||| ||||||||    
T  128299 atatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaatatgacctttctacatttgggtagggtttggg 128200  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||| || |||||||||||||||||   ||  ||||||||| |||| |||||||||||||| ||| ||||| ||||||||    
T  128199 tatgggttcggggtgggtacatatatc--cccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactca 128121  T

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Target: scaffold0013; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 105647 - 105479
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    |||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||| |||||  ||||| ||||| ||||||||    
T  105647 atatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaacatgacctttcaacatttgggtagggtttggg 105548  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaa 179  Q
    ||||| || |||||||||||||  |||| || |||||||||| |||| |||||||| ||||||||| ||||    
T  105547 tatgggttcggggtgggtacat--atatccctgttacccgtcccgtacccgtattaagaaatcggaaaaaa 105479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 40789499 - 40789677
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||||  |||||||    
T  40789499 atatcatgatagttatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacctttctacattcgggtagagtttggg 40789598  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||| | || |||||||||||  |||||| || ||||||||||  ||| |  ||||||||||| || |||||| ||||||||    
T  40789599 tataggttcggggtgggtac--atatatccctgttacccgtccagtacctatattatgaaattggggaaaacccaaactca 40789677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 15068765 - 15068597
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||| ||||| |||||||||||| |||| |||    
T  15068765 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaataaaaatatgacctttctacattcgggtagggttcggg 15068666  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||| || ||||||| |||||||||   || |||||| ||| |||| ||||||| ||||||||| ||||||    
T  15068665 tatgggttcggggtggatacatatat---cccgttacctgtcccgtacccgtattttgaaatcggggaaaac 15068597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 2183771 - 2183606
Alignment:
Q  21 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggg 120  Q
    |||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||| ||||| |||||||||||| |||||| |||||  || |||    
T  2183771 ttatcaaaccaaataacatg-catatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttgagtatgagttcggg 2183673  T
Q  121 gtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    |||||||||||||| | ||| |||||  ||||||| ||||||| |||||||||||||||  ||||||||    
T  2183672 gtgggtacatatatct-cca-ttacctctctcgtacccgtattttgaaatcggagaaaatccaaactca 2183606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 2190013 - 2189907
Alignment:
Q  21 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggg 120  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||| ||||| |||||||||||| |||||| |||||| || |||    
T  2190013 ttatcaaaccaaataacatgacatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttgagtatgggttcggg 2189914  T
Q  121 gtgggta 127  Q
    |||||||    
T  2189913 gtgggta 2189907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 8031062 - 8031170
Alignment:
Q  21 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggg 120  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||| || || |||||||||||| ||||||||||||| || | |    
T  8031062 ttatcaaaccaaataacatggcatatcattatcaaccccctcaac-aaaacaaaaacatgacc-ttctacattcgggtagggtttgggtatgggttcgag 8031159  T
Q  121 gtgggtacata 131  Q
    |||||||||||    
T  8031160 gtgggtacata 8031170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 10297381 - 10297542
Alignment:
Q  23 atcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacatt-cgggtaaggtttgggtatggatttgggg 121  Q
    |||||||||||||||||| |||||||||||||| || |||||||||||||||| |||| ||||| ||||||  ||||| ||||| ||||||| ||  |||    
T  10297381 atcaaaccaaataacatggcatatcattatcaatcccctcaacaaaaacaaaagtatgacctttctacattgggggtagggttttggtatgggttcaggg 10297480  T
Q  122 tgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaa 185  Q
    | |||||  |||||| || |||||| ||| |||  ||||||| ||||||||| |||||| ||||    
T  10297481 taggtac--atatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaaa 10297542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 4594313 - 4594264
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaaccc 58  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  4594313 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccc 4594264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 17469257 - 17469349
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 195  Q
    ||||||||||||| |||||||||||||| ||||||  || |||||||||| | || |||| || ||||||||| |||||| ||||| || |||||    
T  17469257 ggtttgggtatgggtttggggtgggtacctatata--cccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaa 17469349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 15173979 - 15173883
Alignment:
Q  88 tacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    |||||||||||| |||||| |||||  || | ||||| ||||||||| |  || ||||||||| |||| ||||||| |||||||||  |||||||||||    
T  15173979 tacattcgggtacggtttgagtatgagttcgaggtggatacatatatct--catttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaac 15173883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 14507350 - 14507280
Alignment:
Q  61 tcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatat 134  Q
    |||||||||||||||||||| | ||| ||||||||||| |||||||||  ||| || ||||||| |||||||||    
T  14507350 tcaacaaaaacaaaaatatgacttttctacattcgggt-aggtttggg--tgggttcggggtggatacatatat 14507280  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 30904050 - 30904139
Alignment:
Q  103 tttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 195  Q
    ||||||||||| | |||||||||||| ||||| | ||| |||||||||||||| |||| || ||||||| ||| |||| |||||||| |||||    
T  30904050 tttgggtatgggtatggggtgggtacttatatct-cca-ttacccgtctcgtacccgtgttttgaaatc-gaggaaacccaaactcattcaaa 30904139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 16237482 - 16237308
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||| ||||||||    
T  16237482 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttggg 16237383  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaa 185  Q
    ||||| || |||||  ||||  |||||| |  |||||||||| | || ||||||| ||||||||| |||||| ||||    
T  16237382 tatgggttcggggttagtac--atatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaa 16237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 35070035 - 35069889
Alignment:
Q  41 acatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgcca 140  Q
    |||||||||||||||||| |||||||||||||||||||||  |||| |||||||||||| |||||| |||||| || |||||||||||||  |||| ||     
T  35070035 acatatcattatcaaccccctcaacaaaaacaaaaatatgatctttctacattcgggtagggtttgagtatgggttcggggtgggtacat--atatccct 35069938  T
Q  141 gttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  35069937 gttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactca 35069889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 12718943 - 12718772
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||      ||| ||||| |||||| |||| |||||||||    
T  12718943 atatcatgataattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaac------atgacctttttacatttgggt-aggtttggg 12718851  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||| ||  |||||||||||||||| |  | |||||||||||||||  |||||||||||||||| |||||  ||||||||    
T  12718850 tatgggttcagggtgggtacatatattt--ccgttacccgtctcgtacacgtattatgaaatcggggaaaatccaaactca 12718772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 10450237 - 10450112
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||| |||||||||||| ||||||||    
T  10450237 atatcatgacaattattaaaccaaataacatgacatatcattataaaccccctcaacaaaaacaaaaacatgacctttctacattcgggtagggtttggg 10450138  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||  || |||||||||||||||||    
T  10450137 tatgagttcggggtgggtacatatat 10450112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 37032251 - 37032372
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| |||||||||||   ||||| |    
T  37032251 atatcatgatagttatcaaaccaaataacatgacatatcattatcaaccccatcaacaaaaacaaaaacatgacctttctacattcgggtgtagtttgag 37032350  T
Q  109 tatggatttggggtgggtacat 130  Q
    ||||| || | |||||||||||    
T  37032351 tatgggttcgaggtgggtacat 37032372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 19003832 - 19003733
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||| ||||||||    
T  19003832 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaacaaaaatatgacctttctacattcgggtagggtttggg 19003733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 23058459 - 23058552
Alignment:
Q  91 attcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    ||||||||| ||||||||||||| || ||||||||||| |||||   || |||||||||||||||  || ||| ||||||||||||||||||||||    
T  23058459 attcgggtagggtttgggtatgggttcggggtgggtacctatatc--cccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaac 23058552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 19892886 - 19892987
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||| ||    |||||||||||||||   ||| ||||||| |||| ||| ||||    
T  19892886 atatcatgacaattatcaaaccaaataagatgacatatcattatcaaccccct---aaaaaacaaaaatatgagttttctacattcaggtagggtatggg 19892982  T
Q  109 tatgg 113  Q
    |||||    
T  19892983 tatgg 19892987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 17516343 - 17516385
Alignment:
Q  14 atgatatttatcaaaccaaataacatgacatatcattatcaac 56  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17516343 atgatagttatcaaaccaaataacatgacatatcattatcaac 17516385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 23058319 - 23058372
Alignment:
Q  23 atcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaa 76  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||| || |||||    
T  23058319 atcaaaccaaataacatgtcatatcattattaaccccctcaacaacaaaaaaaa 23058372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 16433215 - 16433161
Alignment:
Q  141 gttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 195  Q
    |||||||||| | || |||| || |||||||||||||||||||||| ||||||||    
T  16433215 gttacccgtcccatacccgtgttttgaaatcggagaaaactcaaacccaatcaaa 16433161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 41477038 - 41477005
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatat 134  Q
    |||||||||||||||| |||||||||||||||||    
T  41477038 ggtttgggtatggattcggggtgggtacatatat 41477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 29936419 - 29936496
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||||||||||| || ||||||||||| ||||||  || |||||||||| | || ||||||| ||| ||||| ||||||    
T  29936419 ggtttgggtatgggttcggggtgggtacctatata--cccgttacccgtcccatacccgtattttgagatcggggaaaac 29936496  T

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Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 29200063 - 29199876
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||| ||  | |||||||||||||||||| ||||| ||||||||||||  |||||||    
T  29200063 atatcatgacaattatcaaaccaaataacatggcatatcattatcaatccctttaacaaaaacaaaaatatgacctttctacattcgggtagagtttggg 29199964  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 198  Q
    ||||| || ||||| | |||  |||||| || |||||||||| |||| ||||||| ||||||||| |||||  ||||| |||||||||||    
T  29199963 tatgggttcggggtagatac--atatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaatccaaacccaatcaaatcg 29199876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 18908804 - 18908981
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | ||||||| ||||||||||||  |||||||||||| ||| ||||||||||| ||||| ||| ||||| |||||||||||| ||||||||    
T  18908804 atatcatgacaattatcaatccaaataacatggtatatcattatcagccccctcaacaaaaa-aaaaacatgacctttttacattcgggtagggtttggg 18908902  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||  ||||||||||||||  |||||| |  |||||||||| | |||||||||| ||||||||| |||||| ||||||||    
T  18908903 tatgagtttggggtgggtac--atatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactca 18908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 178
Target Start/End: Complemental strand, 20611158 - 20610993
Alignment:
Q  11 atcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggta 110  Q
    ||||||| | || ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||| |||| ||| ||||||    
T  20611158 atcatgaaaattgtcaaaacaaataacatgacatatcattatcaaccccctcaacaaaaataaaaatatgacctttctacattcaggtagggtctgggta 20611059  T
Q  111 tggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaa 178  Q
    | | || ||||||| |||  |||||| || |||||||||| | || ||||||| ||||||||| ||||    
T  20611058 tagtttcggggtggatac--atatattcccgttacccgtcccctacccgtattttgaaatcggggaaa 20610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 9458575 - 9458751
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||| ||  | ||||||||||||||| | |||  ||||||||||| | ||||||    
T  9458575 atatcatgagaattatcaaaccaaataagatgacatatcattatcaaccccct--aaaaaaacaaaaatatgactttttcacattcgggtaggatttggg 9458672  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||  || | |||||||||  |||||| || |||| | ||| |||| ||||||| |||||| || |||| ||||||||||    
T  9458673 tatgagttcgaggtgggtac--atatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactca 9458751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 9458230 - 9458297
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaa 76  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  9458230 atatcatgataattatcaaaccaaataacatgacatatcattatcaatcccctcaacaaaaacaaaaa 9458297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 256578 - 256492
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||||||||||||| |||||||||||||| |||||  |||  |||||||||||||| || | || ||||||||| |||||||||||||||    
T  256578 ggtttgggtatgggtttggggtgggtacctatat--gcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaactca 256492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 172
Target Start/End: Complemental strand, 17547038 - 17546919
Alignment:
Q  51 atcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtc 150  Q
    |||||||| ||||||||||| ||||| |||  |||| ||| |||||||| ||||||| ||||  || |||||||||||  || ||| || ||||||  ||    
T  17547038 atcaaccccctcaacaaaaataaaaacatgaactttctacgttcgggtagggtttggatatgagttcggggtgggtac--atgtatccccgttaccgatc 17546941  T
Q  151 tcgtatccgtattatgaaatcg 172  Q
     |||||||||||||||||||||    
T  17546940 ccgtatccgtattatgaaatcg 17546919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 32053090 - 32053167
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||||||||||| |||||||||||||||||||||  || |||||||||| | ||||| | || ||||||||| ||||||    
T  32053090 ggtttgggtatgggtttggggtgggtacatatata--cccgttacccgtcccatatccatgttttgaaatcggggaaaac 32053167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 27738774 - 27738851
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||||||||||| || |||||||||||||||||||  | |||||||||| | || |||| || ||||||||| ||||||    
T  27738774 ggtttgggtatgggttcggggtgggtacatatatat--ctgttacccgtcccatacccgtgttttgaaatcggggaaaac 27738851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 9458842 - 9458937
Alignment:
Q  83 ctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    |||| ||||||||||||  ||||||||||   || |||||||||||  |||||| || ||||||| || |||| ||||||||| ||||||| ||||||    
T  9458842 ctttctacattcgggtagagtttgggtataagttcggggtgggtac--atatattcccgttacccatcccgtacccgtattattaaatcggggaaaac 9458937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 14410941 - 14410858
Alignment:
Q  101 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    ||||||||||||| || ||||||||||| ||||||  || |||||||||| | || |||| || ||||||| | ||||||||||||    
T  14410941 ggtttgggtatgggttcggggtgggtacctatata--cccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaac 14410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 23045169 - 23045001
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||| ||||| |||||||||||| ||||| ||    
T  23045169 atatcatgacaattatcaaaccaaataagatgacatatcattatcaaccccctaaa-aaaaacaaaaatatgacctttctacattcgggtagggttttgg 23045071  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 180  Q
    ||||| || ||||||||||||||||| |  | ||||||| || |||| ||||||| ||||||||| ||||||    
T  23045070 tatgggttcggggtgggtacatatatct--ccgttacccatcccgtacccgtattttgaaatcggggaaaac 23045001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 2681130 - 2681304
Alignment:
Q  12 tcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtat 111  Q
    |||||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||| ||||||||| || |||||||||||    
T  2681130 tcatgacaattatcaaaccaaataacatgacatatcattatcaaccc-ctcatcaaaaacaaaaatatgacctttctacattcggatagggtttgggtat 2681228  T
Q  112 ggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    || || ||||||| |||    |||| ||  |||||| || |||| | ||||| ||||||||| |||||| ||||||||    
T  2681229 gggttcggggtggatac--tcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactca 2681304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 20634091 - 20634270
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggttt-gg 107  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||| || ||| ||||| ||||| ||    
T  20634091 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctatatttgggtagggttttgg 20634190  T
Q  108 gtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    |||||| || |||||| || |||||||   ||  ||||||||||| |||||||||| | |||| || ||||||| |||||||    
T  20634191 gtatgggttcggggtgagtgcatatatc--cctattacccgtctcatatccgtattttaaaattggggaaaactgaaactca 20634270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 20650205 - 20650384
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggttt-gg 107  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||| || ||| ||||| ||||| ||    
T  20650205 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctatatttgggtagggttttgg 20650304  T
Q  108 gtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    |||||| || |||||| || |||||||   ||  ||||||||||| |||||||||| | |||| || ||||||| |||||||    
T  20650305 gtatgggttcggggtgagtgcatatatc--cctattacccgtctcatatccgtattttaaaattggggaaaactgaaactca 20650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 12915383 - 12915504
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | | |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||  |||| |||||||||||| ||||||||    
T  12915383 atatcatgacaatcatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacgaaaacatgatctttctacattcgggtagggtttggg 12915482  T
Q  109 tatggatttggggtgggtacat 130  Q
    ||||| || || ||||||||||    
T  12915483 tatggcttcggagtgggtacat 12915504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 43523671 - 43523794
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | ||||||| ||||||||||||  |||||||||||||||| |||||||| |  ||||||||| ||||| |||||||||||| ||||||||    
T  43523671 atatcatgaaaattatcaatccaaataacatggtatatcattatcaaccccctcaacaaca--aaaaatatgacctttttacattcgggtagggtttggg 43523768  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||  || ||||||| |||||||||    
T  43523769 tatgagttcggggtggatacatatat 43523794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 12712673 - 12712549
Alignment:
Q  72 aaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatc 171  Q
    ||||||||| | ||| |||||||||||| ||||||||||||| || | ||||||||||||||| |  | |||| ||||| |||| ||||||| |||||||    
T  12712673 aaaaatatgacatttctacattcgggtagggtttgggtatgggttcgaggtgggtacatatatct--ccgttatccgtcccgtacccgtattttgaaatc 12712576  T
Q  172 ggagaaaactcaaactcaatcaaatcg 198  Q
    ||||||||| |||||||| ||||||||    
T  12712575 ggagaaaacccaaactcagtcaaatcg 12712549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 12773937 - 12773813
Alignment:
Q  72 aaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatc 171  Q
    ||||||||| | ||| |||||||||||| |||||| |||||| || | ||||||||||||||| | |  |||| ||||| |||| ||||||| |||||||    
T  12773937 aaaaatatgacatttctacattcgggtagggtttgagtatgggttcgaggtgggtacatatatctcc--gttatccgtcccgtacccgtattttgaaatc 12773840  T
Q  172 ggagaaaactcaaactcaatcaaatcg 198  Q
    ||||||||| |||||||||||||||||    
T  12773839 ggagaaaacccaaactcaatcaaatcg 12773813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 10834122 - 10834188
Alignment:
Q  10 tatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaa 76  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  10834122 tatcatgatagttatcaaaccaaataacatgacatatcattatcaacccccttaacaaaaacaaaaa 10834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 18116683 - 18116560
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | ||||||| |||| |||||||  |||||||||||||||| |||||||| || ||||||||| ||||| |||||||||||| ||||||||    
T  18116683 atatcatgagaattatcaatccaa-taacatggtatatcattatcaaccccctcaacaacaa-aaaaatatgacctttttacattcgggtagggtttggg 18116586  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||  || ||||||| |||||||||    
T  18116585 tatgagttcggggtggatacatatat 18116560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 12250882 - 12251041
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||||||||||| ||| |||||||||||||| || ||||||||||| | ||| ||  ||||| ||||||| |||| ||||||||    
T  12250882 atatcatgacaattatcaaaccaaataatatggcatatcattatcaatcccctcaacaaaaa-ataaacata-cctttctacattcaggtagggtttggg 12250979  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcg 172  Q
    ||||| ||  | |||||||||||||| |  | ||||||||||  ||| ||||||| ||||||||    
T  12250980 tatgggttcagagtgggtacatatatct--ctgttacccgtccggtacccgtattttgaaatcg 12251041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 34259171 - 34259290
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| || |||      |||||||||||| | ||| |||||||||| | |||||||     
T  34259171 atatcatgacaattatcaaaccaaataacatgacatatcattatcaatcccctc------aacaaaaatatgacttttctacattcggggagggtttgga 34259264  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||| | ||  ||||||||||||||||    
T  34259265 tataggttcagggtgggtacatatat 34259290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 70005 - 70165
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    |||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||| |||||  ||||| ||||| ||||||||    
T  70005 atatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaacatgacctttcaacatttgggtagggtttggg 70104  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatc 171  Q
    ||||| ||||||||||||||||||||   |  |||||||||| |||| |||||||||||||||    
T  70105 tatgggtttggggtgggtacatatatcctc--gttacccgtcccgtacccgtattatgaaatc 70165  T

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Target: scaffold0015 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 56063 - 55950
Alignment:
Q  21 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggg 120  Q
    ||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||  |||| |||||||||||| |||||||||||||||| |||    
T  56063 ttatcaaaccaaataacatggaatatcattatgaaccccctcaacaaaaacaaaaatatgatctttctacattcgggtagggtttgggtatggattcggg 55964  T
Q  121 gtgggtacatatat 134  Q
    ||||||||||||||    
T  55963 gtgggtacatatat 55950  T

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Target: scaffold0008 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 67659 - 67827
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||| ||||||||||  ||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||| |||| ||||||||    
T  67659 atatcatgacaattatcaaatcaaataacatagcatatcattattaaccccctcaacaaaaacaaaaatatgacctttctacattcaggtagggtttggg 67758  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaa 179  Q
    ||| |  | |||||||||||  |||||| || |||| ||||| |||||||||||| | ||||||| |||||    
T  67759 tataggctcggggtgggtac--atatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaa 67827  T

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Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 75502 - 75670
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||| | |||||||| ||||||||||  ||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||| |||| ||||||||    
T  75502 atatcatgacaattatcaaatcaaataacatagcatatcattattaaccccctcaacaaaaacaaaaatatgacctttctacattcaggtagggtttggg 75601  T
Q  109 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaa 179  Q
    ||| |  | |||||||||||  |||||| || |||| ||||| |||||||||||| | ||||||| |||||    
T  75602 tataggctcggggtgggtac--atatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaa 75670  T

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Target: scaffold0005 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 211297 - 211449
Alignment:
Q  31 aaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggtatggatttggggtgggtacat 130  Q
    |||||||||| ||||||||||||||| | || || ||||||||||||||| | ||| ||||||| ||||  |||||||||||| || |||||||||||      
T  211297 aaataacatggcatatcattatcaactccctaaa-aaaaacaaaaatatgacatttctacattcaggtagagtttgggtatgggttcggggtgggtac-- 211393  T
Q  131 atatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    |||||| || ||||||||||||||| ||||||| |||||||||||||||| |||||    
T  211394 atatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaac 211449  T

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Target: scaffold0184 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 2881 - 3057
Alignment:
Q  11 atcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttgggta 110  Q
    ||||||| | |||||||| ||||||||||| ||||| ||||||||||  || |||||||||||| |  || | ||| |||||||||||| |||||| |||    
T  2881 atcatgacaattatcaaatcaaataacatggcatataattatcaacctcctaaacaaaaacaaacaagtgacatttctacattcgggtagggtttgagta 2980  T
Q  111 tggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 189  Q
    ||| || |||||||||||  |||||| ||||||| |||||  ||| ||||||| ||||||||| |||||| ||||||||    
T  2981 tgggttcggggtgggtac--atatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactca 3057  T

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Target: scaffold0182 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 16878 - 17002
Alignment:
Q  9 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatggcctttgtacattcgggtaaggtttggg 108  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||| ||| ||||| || ||||||||| |||||||     
T  16878 atatcatgataattatcaaaccaaataacatggcatatcattatcaatcccctcaataaaaa-aaaaaaatgacctttctagattcgggtatggtttgga 16976  T
Q  109 tatggatttggggtgggtacatatat 134  Q
    ||||  || |||||||||||||||||    
T  16977 tatgagttcggggtgggtacatatat 17002  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 33396 - 33478
Alignment:
Q  102 gtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 186  Q
    |||||||||||| || ||||||||||||||||||  || |||||||||| | || |||| || ||||||||| |||||| |||||    
T  33396 gtttgggtatgggttcggggtgggtacatatata--cccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 33478  T

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