View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5892-Insertion-13 (Length: 96)

Name: NF5892-Insertion-13
Description: NF5892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5892-Insertion-13
NF5892-Insertion-13
[»] chr1 (31 HSPs)
chr1 (8-96)||(38632323-38632411)
chr1 (8-96)||(27564737-27564825)
chr1 (8-96)||(48716284-48716372)
chr1 (8-96)||(2581925-2582013)
chr1 (8-96)||(9474878-9474966)
chr1 (8-96)||(47452322-47452410)
chr1 (8-96)||(3000329-3000417)
chr1 (8-96)||(32813257-32813345)
chr1 (8-96)||(8346390-8346478)
chr1 (8-96)||(38595164-38595252)
chr1 (8-96)||(44548378-44548466)
chr1 (8-96)||(51898685-51898773)
chr1 (8-96)||(50630468-50630556)
chr1 (8-96)||(5959002-5959090)
chr1 (8-96)||(11152380-11152467)
chr1 (8-96)||(41758815-41758903)
chr1 (8-96)||(43142-43230)
chr1 (8-96)||(26274442-26274530)
chr1 (8-96)||(50591002-50591090)
chr1 (18-92)||(6260890-6260964)
chr1 (18-92)||(45044566-45044640)
chr1 (42-92)||(48489344-48489394)
chr1 (10-96)||(49811529-49811615)
chr1 (8-96)||(37649208-37649296)
chr1 (8-96)||(44453989-44454077)
chr1 (29-92)||(13414792-13414855)
chr1 (10-96)||(26440746-26440832)
chr1 (46-96)||(3302535-3302585)
chr1 (23-93)||(44334175-44334245)
chr1 (20-96)||(37926440-37926516)
chr1 (8-96)||(41608495-41608583)
[»] chr5 (23 HSPs)
chr5 (8-96)||(40145417-40145505)
chr5 (8-96)||(18520886-18520974)
chr5 (8-96)||(13811662-13811750)
chr5 (8-96)||(33149640-33149728)
chr5 (8-96)||(2740284-2740372)
chr5 (8-96)||(35785209-35785297)
chr5 (8-96)||(36732944-36733032)
chr5 (8-96)||(14831824-14831912)
chr5 (8-96)||(42414304-42414392)
chr5 (8-96)||(28177785-28177873)
chr5 (8-96)||(35943894-35943982)
chr5 (21-96)||(39557519-39557594)
chr5 (8-92)||(6679708-6679792)
chr5 (8-89)||(41470425-41470506)
chr5 (8-96)||(3921267-3921355)
chr5 (8-96)||(26720526-26720614)
chr5 (8-96)||(26990275-26990363)
chr5 (44-96)||(31132390-31132442)
chr5 (8-94)||(15409614-15409700)
chr5 (46-96)||(31009036-31009086)
chr5 (8-96)||(2252170-2252258)
chr5 (8-57)||(36875644-36875693)
chr5 (46-92)||(21370052-21370098)
[»] chr4 (31 HSPs)
chr4 (8-96)||(41236357-41236445)
chr4 (8-96)||(6034054-6034142)
chr4 (8-96)||(11511464-11511552)
chr4 (8-96)||(29239896-29239984)
chr4 (8-96)||(48183051-48183139)
chr4 (8-96)||(50052430-50052518)
chr4 (8-96)||(480449-480537)
chr4 (8-96)||(42044369-42044457)
chr4 (8-96)||(54473535-54473623)
chr4 (8-96)||(3481664-3481752)
chr4 (8-96)||(29234247-29234335)
chr4 (8-96)||(28480270-28480358)
chr4 (8-96)||(28481145-28481233)
chr4 (8-96)||(28482020-28482108)
chr4 (13-92)||(24995113-24995192)
chr4 (10-96)||(23608247-23608333)
chr4 (38-96)||(41823922-41823980)
chr4 (8-96)||(31910202-31910290)
chr4 (8-96)||(47986218-47986306)
chr4 (8-96)||(50526173-50526261)
chr4 (8-96)||(50813894-50813982)
chr4 (21-96)||(29977908-29977983)
chr4 (8-63)||(40574789-40574844)
chr4 (16-96)||(17983745-17983825)
chr4 (8-96)||(19670718-19670806)
chr4 (8-96)||(53352568-53352655)
chr4 (8-66)||(55079746-55079804)
chr4 (8-66)||(55475201-55475259)
chr4 (7-92)||(48647732-48647817)
chr4 (16-66)||(18924527-18924577)
chr4 (8-96)||(32766968-32767056)
[»] chr7 (33 HSPs)
chr7 (8-96)||(19329852-19329940)
chr7 (8-96)||(3784005-3784093)
chr7 (8-96)||(7389399-7389487)
chr7 (8-96)||(36362036-36362124)
chr7 (8-96)||(4999516-4999604)
chr7 (8-96)||(8080385-8080473)
chr7 (8-96)||(36361915-36362003)
chr7 (8-96)||(38267050-38267138)
chr7 (8-96)||(38837227-38837315)
chr7 (14-96)||(3694383-3694465)
chr7 (10-96)||(35137545-35137631)
chr7 (8-96)||(3434572-3434660)
chr7 (8-96)||(19436189-19436277)
chr7 (8-96)||(32951495-32951583)
chr7 (8-96)||(7727916-7728004)
chr7 (8-96)||(38044207-38044295)
chr7 (8-96)||(8238222-8238311)
chr7 (8-96)||(22343371-22343459)
chr7 (8-92)||(36208183-36208267)
chr7 (8-96)||(40957717-40957805)
chr7 (8-92)||(46374808-46374892)
chr7 (8-96)||(35522886-35522974)
chr7 (8-96)||(40846115-40846203)
chr7 (8-96)||(41915751-41915839)
chr7 (8-63)||(10343598-10343653)
chr7 (8-96)||(18207190-18207277)
chr7 (8-92)||(21234411-21234495)
chr7 (19-90)||(46033809-46033880)
chr7 (8-90)||(41423692-41423774)
chr7 (8-61)||(26296654-26296707)
chr7 (21-80)||(2318261-2318320)
chr7 (42-93)||(16374829-16374880)
chr7 (19-66)||(32564458-32564505)
[»] chr8 (28 HSPs)
chr8 (8-93)||(504126-504211)
chr8 (8-96)||(14547932-14548020)
chr8 (8-96)||(12831057-12831145)
chr8 (8-96)||(15197343-15197431)
chr8 (8-96)||(23122599-23122687)
chr8 (8-96)||(34012298-34012386)
chr8 (8-96)||(40423945-40424033)
chr8 (8-96)||(44507089-44507177)
chr8 (8-96)||(1179942-1180030)
chr8 (8-96)||(37038489-37038577)
chr8 (8-96)||(5957840-5957928)
chr8 (8-96)||(10284633-10284721)
chr8 (8-96)||(10621089-10621177)
chr8 (8-96)||(15048184-15048271)
chr8 (17-96)||(8841434-8841513)
chr8 (46-96)||(9122233-9122283)
chr8 (8-96)||(4854865-4854953)
chr8 (8-96)||(16383387-16383475)
chr8 (8-96)||(17443835-17443923)
chr8 (8-66)||(30479506-30479564)
chr8 (8-81)||(14055609-14055682)
chr8 (8-96)||(34307226-34307314)
chr8 (8-96)||(43414583-43414671)
chr8 (42-92)||(15258935-15258985)
chr8 (8-96)||(24307795-24307883)
chr8 (8-66)||(32032735-32032792)
chr8 (46-96)||(42221563-42221613)
chr8 (53-96)||(40467755-40467798)
[»] chr6 (17 HSPs)
chr6 (8-96)||(32869688-32869776)
chr6 (8-96)||(17598564-17598652)
chr6 (8-96)||(22880660-22880748)
chr6 (10-96)||(31109402-31109488)
chr6 (8-96)||(29857837-29857925)
chr6 (8-96)||(6209467-6209555)
chr6 (8-96)||(31976258-31976346)
chr6 (8-96)||(11427626-11427716)
chr6 (10-96)||(23128129-23128215)
chr6 (8-96)||(31110763-31110849)
chr6 (8-96)||(15508026-15508114)
chr6 (8-96)||(15990044-15990132)
chr6 (8-96)||(30341362-30341450)
chr6 (10-96)||(31953032-31953118)
chr6 (8-96)||(28536490-28536576)
chr6 (8-96)||(946386-946474)
chr6 (8-87)||(15832587-15832666)
[»] chr3 (31 HSPs)
chr3 (8-96)||(17470415-17470503)
chr3 (8-96)||(53982021-53982109)
chr3 (8-96)||(27714893-27714981)
chr3 (8-96)||(33644210-33644298)
chr3 (8-96)||(52629310-52629398)
chr3 (8-96)||(54868897-54868985)
chr3 (8-96)||(49607424-49607512)
chr3 (9-92)||(26754706-26754789)
chr3 (8-96)||(8076403-8076491)
chr3 (8-96)||(26141534-26141622)
chr3 (8-96)||(31456699-31456787)
chr3 (8-96)||(20764917-20765005)
chr3 (8-96)||(11095357-11095443)
chr3 (8-92)||(30801739-30801823)
chr3 (8-96)||(47531875-47531963)
chr3 (8-96)||(48587093-48587181)
chr3 (8-96)||(14623841-14623929)
chr3 (8-96)||(33118853-33118941)
chr3 (8-83)||(36707439-36707514)
chr3 (9-92)||(48375712-48375795)
chr3 (8-96)||(11347924-11348012)
chr3 (8-92)||(11907381-11907465)
chr3 (8-96)||(51419362-51419450)
chr3 (8-96)||(24699956-24700044)
chr3 (8-96)||(41189766-41189854)
chr3 (8-88)||(45058563-45058642)
chr3 (18-96)||(13898057-13898135)
chr3 (8-96)||(9563009-9563097)
chr3 (8-96)||(35093595-35093683)
chr3 (20-96)||(36331331-36331407)
chr3 (8-95)||(35536636-35536723)
[»] chr2 (33 HSPs)
chr2 (8-96)||(10249384-10249472)
chr2 (8-96)||(27864714-27864802)
chr2 (8-96)||(28863465-28863553)
chr2 (8-96)||(32505650-32505738)
chr2 (8-96)||(9058490-9058578)
chr2 (8-96)||(19930822-19930910)
chr2 (8-96)||(33436102-33436190)
chr2 (8-96)||(40701488-40701576)
chr2 (8-96)||(4060695-4060783)
chr2 (8-96)||(7465737-7465825)
chr2 (8-96)||(13438353-13438441)
chr2 (8-96)||(17473030-17473118)
chr2 (8-96)||(28381657-28381745)
chr2 (8-96)||(5574490-5574578)
chr2 (8-96)||(30915473-30915561)
chr2 (8-96)||(40613904-40613992)
chr2 (8-81)||(38882831-38882903)
chr2 (8-96)||(20700825-20700913)
chr2 (8-96)||(38273144-38273232)
chr2 (11-92)||(3439992-3440073)
chr2 (8-96)||(41575147-41575236)
chr2 (8-92)||(26891510-26891594)
chr2 (8-96)||(2533134-2533221)
chr2 (16-96)||(2997489-2997569)
chr2 (8-96)||(33436221-33436309)
chr2 (8-96)||(42257203-42257291)
chr2 (8-96)||(43490131-43490219)
chr2 (46-92)||(3737991-3738037)
chr2 (14-96)||(13365369-13365451)
chr2 (8-92)||(17820010-17820094)
chr2 (8-96)||(38732364-38732452)
chr2 (8-96)||(36168846-36168934)
chr2 (8-96)||(45097737-45097825)
[»] scaffold1268 (1 HSPs)
scaffold1268 (8-96)||(931-1019)
[»] scaffold1267 (1 HSPs)
scaffold1267 (8-96)||(931-1019)
[»] scaffold0237 (1 HSPs)
scaffold0237 (8-96)||(4039-4127)
[»] scaffold0321 (1 HSPs)
scaffold0321 (8-96)||(10111-10199)
[»] scaffold0316 (1 HSPs)
scaffold0316 (42-92)||(17098-17148)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-96)||(152514-152596)


Alignment Details
Target: chr1 (Bit Score: 77; Significance: 3e-36; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 38632411 - 38632323
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  38632411 acatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 27564825 - 27564737
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27564825 acatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacacttt 27564737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 48716372 - 48716284
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  48716372 acatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 2581925 - 2582013
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  2581925 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 2582013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 9474966 - 9474878
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  9474966 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 47452410 - 47452322
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||| ||| ||||||||| ||||||||||||||||||    
T  47452410 acatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacacttt 47452322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 3000329 - 3000417
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  3000329 acataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 3000417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 32813257 - 32813345
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||  |||| |||||||||||||||||||||||    
T  32813257 acatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacacttt 32813345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 8346478 - 8346390
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||| |||| |||||||| |||||||| ||| ||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  8346478 acatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacacttt 8346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 38595164 - 38595252
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||||| |||||||| |||||||| ||| ||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  38595164 acataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 38595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 44548466 - 44548378
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||| |||||||| ||| | | |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  44548466 acatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 44548378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 51898773 - 51898685
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  51898773 acatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 50630468 - 50630556
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||| |||||||||||| |||||| | |||   | |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  50630468 acatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 5959090 - 5959002
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||||||||| |||| ||||||||| || ||| |||||||||||||||||||||  |||  ||||||||||||||| |||||||    
T  5959090 acataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacacttt 5959002  T

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Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 11152467 - 11152380
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| |||||||| |||||||| ||  |||||||||||||||||||||| ||| ||| || |||||||||||||||| ||||    
T  11152467 acatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgcttt 11152380  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 41758815 - 41758903
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| |||  ||| |||||||| ||| ||| |||||||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  41758815 acatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 43142 - 43230
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||  |||||| |  |||||| | ||| ||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  43142 acatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacacttt 43230  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 26274442 - 26274530
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||| |||| |||||| | ||| ||||||||| ||||||||||||  || ||||||||| || ||||||| |||||||    
T  26274442 acatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacacttt 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 50591090 - 50591002
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  50591090 acataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 6260890 - 6260964
Alignment:
Q  18 ccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||||||||||||||||  | |||| ||||| |||||||| ||||||  |||||||||||||||| |||||||    
T  6260890 ccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcaca 6260964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 45044640 - 45044566
Alignment:
Q  18 ccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||||||| |||||||| ||| ||| ||| ||||||||||||||||||  ||| |||||||||||||| ||||    
T  45044640 ccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 48489344 - 48489394
Alignment:
Q  42 acatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  48489344 acatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 49811615 - 49811529
Alignment:
Q  10 atagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||| |||||||||  |||||||| ||| |||||||||||||||||||||| |||  ||  | ||| |||||||||||||||||    
T  49811615 atagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacacttt 49811529  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37649208 - 37649296
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||| |||||||  ||| ||| |||||||||||||||||| ||  ||||||| |  |||||||||||||||||    
T  37649208 acatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacacttt 37649296  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 44453989 - 44454077
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| ||| |||| |||||| || || | | |||||||||||||||||||||  | ||||||| ||| ||||||||||||||    
T  44453989 acatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 13414792 - 13414855
Alignment:
Q  29 aatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||||| ||| ||| |||||||||||||| ||| ||| ||||||||||||| ||||||||||    
T  13414792 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 26440746 - 26440832
Alignment:
Q  10 atagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||| |||||| ||  |||||||| ||||||| |||||||||||||||||| ||   ||| |||| |||||| |||||||||||    
T  26440746 atagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacacttt 26440832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 3302585 - 3302535
Alignment:
Q  46 ccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||| |||||||  ||||||||  |||||||||||||    
T  3302585 ccacacaaaaatctgacacgtaatcatatggaccccatacaagcacacttt 3302535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 44334245 - 44334175
Alignment:
Q  23 ggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacac 93  Q
    |||||||||||||   || ||||||||||||||| |||||| ||| |||| ||||||| |||||| |||||    
T  44334245 ggtggtaatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 37926516 - 37926440
Alignment:
Q  20 ttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||| |||||| ||||||||| ||||| |||||||||||| ||   ||| |||| |||| ||||| |||||||    
T  37926516 ttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 41608583 - 41608495
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||| |||||||||| ||||||||  || |||  ||||||||||||||||||||   ||  ||||||||| ||||| |||||||    
T  41608583 acataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 6e-34; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 6e-34
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 40145417 - 40145505
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  40145417 acatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 40145505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 18520974 - 18520886
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  18520974 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 18520886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 13811662 - 13811750
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||| | ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  13811662 acatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 13811750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 33149728 - 33149640
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||| ||| ||||||||| ||||||||||||||||||    
T  33149728 acatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacacttt 33149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 2740284 - 2740372
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  2740284 acatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 35785209 - 35785297
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||| | ||||||| ||||||||| ||||||||    
T  35785209 acatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacacttt 35785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 36733032 - 36732944
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||| | |||||||| ||| ||| ||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  36733032 acatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacacttt 36732944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 14831824 - 14831912
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||| ||||||||| |||||||| ||| ||| ||||| |||||||||||| ||| ||||||||| ||||||||||||||||||    
T  14831824 acatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 14831912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 42414392 - 42414304
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||  ||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  42414392 acatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 28177785 - 28177873
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||| ||| |||||||||||||||||| ||  |||| |||||||||||||| ||||||||    
T  28177785 acatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacacttt 28177873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 35943982 - 35943894
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||| | ||| ||| |||||||||||||||||| ||| | ||||||| ||| ||||||||||||||    
T  35943982 acatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacacttt 35943894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 39557594 - 39557519
Alignment:
Q  21 taggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||||||  |||| ||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacacttt 39557519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 6679708 - 6679792
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||| | |||||||| |||||||||||| ||| |||||||||||||||||| ||  |||| |||||||||||||| ||||    
T  6679708 acatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 41470506 - 41470425
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagc 89  Q
    ||||||||||| |||||||| |||||| | ||||| || || | |||||||||||| ||| |||||||||||||||||||||    
T  41470506 acatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 3921355 - 3921267
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  3921355 acataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 3921267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 26720526 - 26720614
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||||||| | ||| |||||||||||| ||   ||| |||| ||||||||||||||||||    
T  26720526 acatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 26990275 - 26990363
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||||||| | ||| |||||||||||| ||   ||| |||| ||||||||||||||||||    
T  26990275 acatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 31132390 - 31132442
Alignment:
Q  44 atccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  31132390 atccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatacttt 31132442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 15409700 - 15409614
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacact 94  Q
    ||||||||| |||||||||  ||||||   ||| ||| |||||||||||||||||| |||  ||| |||||||||||||||||||||    
T  15409700 acatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacact 15409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 31009036 - 31009086
Alignment:
Q  46 ccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  31009036 ccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 31009086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 2252258 - 2252170
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||| |||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  2252258 acataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 36875693 - 36875644
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaat 57  Q
    |||||||||||||||||||| |||||||| ||| ||| ||||||||||||    
T  36875693 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 21370052 - 21370098
Alignment:
Q  46 ccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  21370052 ccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacaca 21370098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 6e-34; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 6e-34
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 41236357 - 41236445
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  41236357 acatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 41236445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 6034054 - 6034142
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  6034054 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 11511552 - 11511464
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| ||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  11511552 acatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 29239896 - 29239984
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||||    
T  29239896 acatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacacttt 29239984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 48183139 - 48183051
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||| |||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  48183139 acatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48183051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 50052518 - 50052430
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  50052518 acatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 480537 - 480449
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  |||||||| ||| ||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  480537 acatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 480449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 42044457 - 42044369
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||| | ||  ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  42044457 acatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 42044369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 54473623 - 54473535
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  |||||||| ||| ||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  54473623 acatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 3481664 - 3481752
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| |||||||| |||||||  ||| ||| ||||||||||||||||||  || ||||||||||||| ||||||||||||||    
T  3481664 acatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacacttt 3481752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 29234335 - 29234247
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||| ||| |||||||| ||| | | |  ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  29234335 acatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 28480358 - 28480270
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||  ||||||| | ||||||  ||||||||||||||||||||| ||| ||||||||| ||||| ||||||||    
T  28480358 acatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 28481233 - 28481145
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||  ||||||| | ||||||  ||||||||||||||||||||| ||| ||||||||| ||||| ||||||||    
T  28481233 acatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 28482108 - 28482020
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||  ||||||| | ||||||  ||||||||||||||||||||| ||| ||||||||| ||||| ||||||||    
T  28482108 acatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 24995192 - 24995113
Alignment:
Q  13 gacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||||| ||| |||||||| ||| ||| ||||| |||||| ||||| ||| ||||||||||||||||||||||||    
T  24995192 gacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 23608247 - 23608333
Alignment:
Q  10 atagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||| ||  |||||||| ||| ||| |||||||||||||||||| ||| ||||||| || || ||||||||||||||    
T  23608247 atagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacacttt 23608333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 41823922 - 41823980
Alignment:
Q  38 tttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  41823922 tttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacacttt 41823980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 31910202 - 31910290
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||  |||||||  ||| ||| ||||||||||||||||||  ||  ||| |||||||||||||||||||||||    
T  31910202 acatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 47986218 - 47986306
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| |||||| |  || |||||||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  47986218 acataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 50526261 - 50526173
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||| |||||||| ||| ||| |||||||||||||||||| ||  |||||||||  |||||||||||| ||||    
T  50526261 acatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgcttt 50526173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 50813982 - 50813894
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||| ||||||||||||||||||  || ||| |||||||||||||||||||||  |||  || |||||||||||| |||||||    
T  50813982 acataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 29977908 - 29977983
Alignment:
Q  21 taggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||| ||||||||  |||||| |||||||||||||||||| ||| |||  |||||||| ||||||||||||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacacttt 29977983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 40574789 - 40574844
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgaca 63  Q
    ||||||||| ||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  40574789 acatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 17983825 - 17983745
Alignment:
Q  16 acccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 17983745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 19670806 - 19670718
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || |||  ||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  19670806 acataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 19670718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 53352655 - 53352568
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  ||||||   ||||||| | |||||||||||||||| ||| | | |||||||||||||||||| |||||    
T  53352655 acatagacacccttaggtgc-aatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatacttt 53352568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 55079804 - 55079746
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgt 66  Q
    ||||| |||||||||||||| ||||||||| || ||| ||| |||||||||||||||||    
T  55079804 acataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgt 55079746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 55475201 - 55475259
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgt 66  Q
    ||||| ||| |||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  55475201 acataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgt 55475259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 48647817 - 48647732
Alignment:
Q  7 cacatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||| ||| ||||||||   ||||||||| |||||| ||||| |||||||| ||| ||  |||||||||| |||||||||||||    
T  48647817 cacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 18924577 - 18924527
Alignment:
Q  16 acccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgt 66  Q
    |||||||||||| ||||||||  || | |||||||||||||||||||||||    
T  18924577 acccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgt 18924527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 32766968 - 32767056
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||| ||||||||| ||||||||  || ||| ||| |||||||||||||||||   ||  ||||||| ||||||| |||||||    
T  32766968 acataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacacttt 32767056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 2e-31; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 19329852 - 19329940
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19329852 acatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacacttt 19329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 3784005 - 3784093
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||| ||||| ||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  3784005 acatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 3784093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 7389399 - 7389487
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||  ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  7389399 acatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 7389487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 36362036 - 36362124
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||||||||||||||| | ||| ||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  36362036 acatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 4999604 - 4999516
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||| ||| |||||||||||| ||| |||||||||||||||| | ||| ||||||||||||||||||| ||||||||    
T  4999604 acatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacacttt 4999516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 8080473 - 8080385
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| | ||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  8080473 acatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 8080385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 36362003 - 36361915
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||| | ||| ||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  36362003 acatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 38267050 - 38267138
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||| |||  |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  38267050 acatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 38837227 - 38837315
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||  ||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  38837227 acatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38837315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 3694383 - 3694465
Alignment:
Q  14 acacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||  |||||||||||||||| |||||||||||||||||| ||| ||| ||||| ||||||||||||||||||    
T  3694383 acacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacacttt 3694465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 35137545 - 35137631
Alignment:
Q  10 atagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||||||||| ||| ||| ||||||||||||||||||| ||||||||    
T  35137545 atagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacacttt 35137631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 3434572 - 3434660
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||| ||| ||||||||||| |||||| ||| ||||||||| ||||||||||||||||||    
T  3434572 acatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 19436277 - 19436189
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||  |||||||||||| ||| |||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  19436277 acatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacacttt 19436189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 32951583 - 32951495
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||| ||||| ||  |||||| | |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  32951583 acatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 32951495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 7727916 - 7728004
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||||||||||||| || |||| |||| |||||||||||||||  |||  ||||||||||||||| |||||||    
T  7727916 acataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacacttt 7728004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 38044207 - 38044295
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||||||||||||||||||||||||||  ||  ||||||||||||||| |||||||    
T  38044207 acataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacacttt 38044295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 8238222 - 8238311
Alignment:
Q  8 acatagacaccct-taggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||||||| ||||||| |||||||| ||| ||| |||||||||||||||||||||| |||  ||||||||||||||| |||||||    
T  8238222 acataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacacttt 8238311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 22343371 - 22343459
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| ||||||||||||||||||||| | ||  ||||||||||||||| |||||||    
T  22343371 acataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 36208183 - 36208267
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||||||||||||||||||||||||    || ||| ||||||||||| |||||||||  |||||||||||| |||||||||||    
T  36208183 acatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 40957717 - 40957805
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||| ||||||||| |||||||  ||| | | |||||||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  40957717 acatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacacttt 40957805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 46374892 - 46374808
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||| |||||||||| || ||||| ||||||| |||||||||||||||||| ||   ||| |||||||||||||||||||    
T  46374892 acatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 35522886 - 35522974
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| ||||| |||| |||||||| ||||||| |||||||||||||||||| ||   ||  |||| ||||||||||||||||||    
T  35522886 acatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacacttt 35522974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 40846203 - 40846115
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||| |||||||||| ||||||||  || |||||||||||||||||| ||||||| | |  ||||||||||||||  |||||||    
T  40846203 acataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacacttt 40846115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 41915751 - 41915839
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| | |||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  41915751 acataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 10343653 - 10343598
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgaca 63  Q
    |||||||||||||||||||| ||||||| | || ||| ||||||||||||||||||    
T  10343653 acatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgaca 10343598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 18207190 - 18207277
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| ||||||||| || ||| ||| |||||||||| ||| ||   |||||| ||||| ||||||||||||||    
T  18207190 acatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacacttt 18207277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 21234411 - 21234495
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||| |||||||||  |||||||| ||| |||  ||||||||||| ||||| |||  ||| || ||||||||||||||||    
T  21234411 acatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 46033880 - 46033809
Alignment:
Q  19 cttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagca 90  Q
    ||||||||| |||||||| ||||||| ||||| |||||||||||| ||  |||| || || |||||||||||    
T  46033880 cttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 41423692 - 41423774
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagca 90  Q
    ||||||||| | |||| ||||||||||||| || |||   |||||||||||||||||||  |||||| || |||| |||||||    
T  41423692 acatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagca 41423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 26296654 - 26296707
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctga 61  Q
    ||||||||| |||||||||  |||| ||| ||||||||||||| ||||||||||    
T  26296654 acatagacatccttaggtgacaatataccctttaacatccacataaaaatctga 26296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 2318320 - 2318261
Alignment:
Q  21 taggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccc 80  Q
    ||||||| || |||||| || ||| ||||||||||||||||| |||  ||||||||||||    
T  2318320 taggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggaccc 2318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 16374880 - 16374829
Alignment:
Q  42 acatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacac 93  Q
    |||||||||||||||||||||| ||  ||||||||| | | |||||||||||    
T  16374880 acatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacac 16374829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 32564505 - 32564458
Alignment:
Q  19 cttaggtggtaatacaccttttaacatccacacaaaaatctgacatgt 66  Q
    ||||||||| ||||||||  || ||| |||||||||||||||||||||    
T  32564505 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgt 32564458  T

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Target: chr8 (Bit Score: 66; Significance: 9e-30; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 9e-30
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 504211 - 504126
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacac 93  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  504211 acatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 504126  T

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Target: chr8; HSP #2
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 14547932 - 14548020
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  14547932 acatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 14548020  T

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Target: chr8; HSP #3
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 12831057 - 12831145
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  12831057 acatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 12831145  T

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Target: chr8; HSP #4
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 15197343 - 15197431
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||| ||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  15197343 acatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 15197431  T

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Target: chr8; HSP #5
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 23122687 - 23122599
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||| |||| |||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  23122687 acatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacacttt 23122599  T

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Target: chr8; HSP #6
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 34012386 - 34012298
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||| ||| ||||||||| ||||||||||||||||||    
T  34012386 acatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacacttt 34012298  T

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Target: chr8; HSP #7
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 40424033 - 40423945
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  40424033 acatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T

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Target: chr8; HSP #8
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 44507177 - 44507089
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||| |||||||||||||| ||||||| |||||    
T  44507177 acatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T

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Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 1180030 - 1179942
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||| ||| |||||  |||||||||||||||||    
T  1180030 acatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacacttt 1179942  T

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Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37038489 - 37038577
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  37038489 acatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 5957840 - 5957928
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||  ||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||| ||||||||| ||||||||    
T  5957840 acatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacacttt 5957928  T

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Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 10284721 - 10284633
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||| |||  |||||||  ||| ||| |||||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  10284721 acatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacacttt 10284633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 10621177 - 10621089
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||| |||  ||| | || ||||||||||||||||||    
T  10621177 acatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacacttt 10621089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 15048271 - 15048184
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||| ||| |||||||||||||||||| |||  ||| |||||||||||||||||||||||    
T  15048271 acatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 8841513 - 8841434
Alignment:
Q  17 cccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| | |||||| ||| ||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 8841434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 9122233 - 9122283
Alignment:
Q  46 ccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  9122233 ccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 9122283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 4854953 - 4854865
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||||||| | ||| |||||||||| ||||   ||| ||||||| |||||||||||||||    
T  4854953 acatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacacttt 4854865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 16383387 - 16383475
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  16383387 acataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 16383475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 17443835 - 17443923
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||  ||||||| | ||||||  ||||||||||||||||||||| ||| ||||||||| |||||  |||||||    
T  17443835 acatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 30479564 - 30479506
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgt 66  Q
    ||||| |||||||||||||| |||||||| ||| ||||||||| |||||||||||||||    
T  30479564 acataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgt 30479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 14055682 - 14055609
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggacccc 81  Q
    |||| ||||||||||||||  |||||||   || |||||||||||||||||| ||||||| |||||||||||||    
T  14055682 acattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 34307226 - 34307314
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  || |||||||||||| |||||||    
T  34307226 acataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacacttt 34307314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 43414671 - 43414583
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||| ||| || ||||| ||| ||| |||||||||||||| ||| ||  |||| |||| ||||||||||||||||||    
T  43414671 acatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacacttt 43414583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 15258985 - 15258935
Alignment:
Q  42 acatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||| |||||||||||||||  |||||||||||| |||||||||||    
T  15258985 acatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 24307883 - 24307795
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| |||||| |  || ||| |||||||||||||||| ||||   ||  ||||||||||||||| |||||||    
T  24307883 acataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacacttt 24307795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 32032735 - 32032792
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgt 66  Q
    ||||| |||||||||||||| |||||| | || | ||||||||||||||||||||||||    
T  32032735 acataaacacccttaggtggcaatacatccttga-catccacacaaaaatctgacatgt 32032792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 42221563 - 42221613
Alignment:
Q  46 ccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||| |||||||  ||||||||  |||||||||||||    
T  42221563 ccacacaaaaatctgacacgtaatcatatggaccccatacaagcacacttt 42221613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 40467755 - 40467798
Alignment:
Q  53 aaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||| | |||||||||  ||||||||||||||||    
T  40467755 aaaatctgacatgtgaccacgtggacttcgcacaagcacacttt 40467798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 4e-29; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 32869688 - 32869776
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  32869688 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32869776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 17598564 - 17598652
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||| ||||| ||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  17598564 acatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacacttt 17598652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 22880748 - 22880660
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  22880748 acatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacacttt 22880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 31109488 - 31109402
Alignment:
Q  10 atagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||| |||||| ||||||||| ||| |||||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacacttt 31109402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 29857837 - 29857925
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||| ||| | ||||||| |||||| |||||||||||    
T  29857837 acatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 29857925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 6209555 - 6209467
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||  ||| |||  |||||||||||||| || ||| ||||||||||||||||| ||||||||||    
T  6209555 acatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacacttt 6209467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 31976258 - 31976346
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||| ||| ||||||| |||||||||||||||||| ||  |||| || ||||||||||||||||||||    
T  31976258 acatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 11427626 - 11427716
Alignment:
Q  8 acatagacaccct--taggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||  ||||||| |||||| | ||| ||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  11427626 acatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 11427716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 23128215 - 23128129
Alignment:
Q  10 atagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| ||| ||| ||||||| | ||| ||| |||||||||||||||||| ||| ||||||||| ||| ||||||||||||||    
T  23128215 atagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacacttt 23128129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 31110849 - 31110763
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||| |||  | ||||||||||||||| |||| ||| ||||||| |||||||||||||||    
T  31110849 acatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcacacttt 31110763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 15508114 - 15508026
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  15508114 acataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 15990132 - 15990044
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  15990132 acataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15990044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 30341450 - 30341362
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  30341450 acataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 30341362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 31953118 - 31953032
Alignment:
Q  10 atagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||| |||||||||| ||||||||  || ||| ||||| |||||||||||||||  ||| ||||||| | ||||| ||||||||    
T  31953118 atagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacacttt 31953032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 28536576 - 28536490
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||| |||||||||| |||||| |  || ||| |||||||||||||||||| |   ||| ||||||||| ||||||||||||||    
T  28536576 acataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacacttt 28536490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 946386 - 946474
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| ||||||||| ||||||||| ||| ||| | || |||||||||||||  || ||||||  | ||||| | ||||||||||    
T  946386 acatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacacttt 946474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 15832587 - 15832666
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaa 87  Q
    ||||||||||| |||||||  |||| | | ||| ||| |||||||||||| ||||| ||| ||||||||| || ||||||    
T  15832587 acatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 4e-29; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 17470415 - 17470503
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| |||||||| |||||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  17470415 acatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 53982021 - 53982109
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  53982021 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 53982109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 27714981 - 27714893
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  27714981 acatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 27714893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 33644210 - 33644298
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||| ||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  33644210 acatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 52629310 - 52629398
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  52629310 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 52629398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 54868985 - 54868897
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||| | ||||||||||||||||| ||||||||    
T  54868985 acatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 54868897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 49607424 - 49607512
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||| ||| ||||||||||||||    
T  49607424 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacacttt 49607512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 26754706 - 26754789
Alignment:
Q  9 catagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  26754706 catagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 8076403 - 8076491
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||| | |||||| ||| ||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  8076403 acataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 8076491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 26141622 - 26141534
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||  |||| |||||||| ||||||||||||||    
T  26141622 acatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacacttt 26141534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 31456699 - 31456787
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||| |||| || |||||||| ||| ||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  31456699 acatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 31456787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 20765005 - 20764917
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| ||||||||||||||||||  ||||||| |||||||||||||||||| ||   ||| ||||||||| |||||||||||||    
T  20765005 acatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 11095443 - 11095357
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||  |||||||| || ||||||||    
T  11095443 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacacttt 11095357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 30801823 - 30801739
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||||||||||||| ||||||||| ||| | | |||||||||||| ||||||||| |||  |||||||| ||||||||||    
T  30801823 acatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 47531875 - 47531963
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||| ||||||||| ||   ||  || ||||||||||||||||||||    
T  47531875 acatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacacttt 47531963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 48587181 - 48587093
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||| |||||||||||| |||||||| ||| ||| | ||| |||||||||||| ||| ||||||||| |||||||||| |||||||    
T  48587181 acatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacacttt 48587093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 14623929 - 14623841
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| ||||||||  || ||| ||||| |||||||||||||||  ||| ||||||| | ||||||||||||||    
T  14623929 acatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacacttt 14623841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 33118941 - 33118853
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  |||||||| ||| ||| |||||||||||| ||||| ||| ||||||||| ||| || || ||||||||    
T  33118941 acatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacacttt 33118853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 36707514 - 36707439
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgc 83  Q
    ||||||| |||||||||||  |||||||| ||| |||||||||||||||||||||| ||| | ||||||| |||||    
T  36707514 acatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 48375795 - 48375712
Alignment:
Q  9 catagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||||||||||||  ||||||||  | || ||||| ||||||||||||| |||  |||| |||||||||||||||||||    
T  48375795 catagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcaca 48375712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 11348012 - 11347924
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||  |||||| | ||| |||||||||||||||||||||| ||   ||| ||||||| ||| |||||||||||    
T  11348012 acatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacacttt 11347924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 11907381 - 11907465
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||||||||||||||||  |||||||   | ||||  ||||||||||||||||||||  |||  |||||||||||||||||||    
T  11907381 acatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

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Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 51419450 - 51419362
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||| ||  |||||| | ||||||| |||||||||||||||||| ||   ||| | |||||||||||||||||||||    
T  51419450 acatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacacttt 51419362  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 24700044 - 24699956
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||| ||| |||||||||||| ||| ||||| ||||||||| || ||   ||||||||||| | |||| ||||||||    
T  24700044 acatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T

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Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 41189854 - 41189766
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||| |||||||||| |||||| | ||| ||| ||||| |||||| ||||| ||   ||| |||||||||||||||||||||||    
T  41189854 acatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacacttt 41189766  T

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Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 45058642 - 45058563
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaag 88  Q
    ||||| |||||||||||||| |||||||| || | || ||||| ||||||||||||||| | ||  |||||||||||||||    
T  45058642 acataaacacccttaggtggcaatacacccttga-cacccacataaaaatctgacatgtgaccatatggaccccgcacaag 45058563  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 13898135 - 13898057
Alignment:
Q  18 ccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||| ||||||||  || ||| ||||| |||||||||||| ||  ||| ||||||| | ||||||||||||||    
T  13898135 ccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacacttt 13898057  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 9563009 - 9563097
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||||| |||| ||  |||||| | ||| ||||||| | |||||||||||| ||| ||||||||| || |||||| ||||||||    
T  9563009 acataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacacttt 9563097  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 35093595 - 35093683
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||  |||||| | ||| |||||||| ||||||||||||||||  ||| ||| || ||  |||||||||||||    
T  35093595 acatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacacttt 35093683  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 36331407 - 36331331
Alignment:
Q  20 ttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||| ||| ||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 36331331  T

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Target: chr3; HSP #31
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 35536636 - 35536723
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacactt 95  Q
    ||||||||| ||||| |||| |||||||| ||| ||| ||||| |||||| ||||| ||  ||| |||||||   |||||||||||||    
T  35536636 acatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacactt 35536723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 4e-29; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 10249472 - 10249384
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  |||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  10249472 acatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 10249384  T

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Target: chr2; HSP #2
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 27864714 - 27864802
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||||||| |||| |||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  27864714 acatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacacttt 27864802  T

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Target: chr2; HSP #3
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 28863465 - 28863553
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  28863465 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 28863553  T

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Target: chr2; HSP #4
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 32505738 - 32505650
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  |||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  32505738 acatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T

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Target: chr2; HSP #5
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 9058490 - 9058578
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  9058490 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 9058578  T

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Target: chr2; HSP #6
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 19930910 - 19930822
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||    
T  19930910 acatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacacttt 19930822  T

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Target: chr2; HSP #7
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 33436190 - 33436102
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  33436190 acatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 33436102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 40701488 - 40701576
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||| | ||||||||||||||||| ||||||||    
T  40701488 acatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 40701576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 4060695 - 4060783
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||| | ||||||| |||||| |||||||||||    
T  4060695 acatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4060783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 7465825 - 7465737
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||| ||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  7465825 acatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 13438353 - 13438441
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||  |||||| | ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  13438353 acatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 13438441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 17473030 - 17473118
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||| ||| |||||||| ||| ||| |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  17473030 acatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 17473118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 28381745 - 28381657
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||||||  ||| |||||||||||||||||| ||| |||| ||||| |||||||||||||||||    
T  28381745 acatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacacttt 28381657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 5574578 - 5574490
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||| ||||||||| |||||||| ||| ||| ||||| |||||||||||| ||| ||||||||| ||||||||||||||||||    
T  5574578 acatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 30915473 - 30915561
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||||||||||| |||||||| ||| ||  ||||| |||||||||||| ||| |||||||||||||| |||||||||||||    
T  30915473 acatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 30915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 40613992 - 40613904
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||||||| |||||||| ||| ||| |||||||||||||||||| ||   ||| |||||||||||||||||||||||    
T  40613992 acatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacacttt 40613904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 38882903 - 38882831
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggacccc 81  Q
    |||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||| ||| |||||||||||||    
T  38882903 acatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 20700825 - 20700913
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| ||||| |||| |||||||| ||| ||  | |||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  20700825 acatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacacttt 20700913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 38273232 - 38273144
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||  ||||| ||| |||||||| ||||||| |||||||||||||||||| |||  ||| |||||||||||| ||||||||||    
T  38273232 acatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacacttt 38273144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 3439992 - 3440073
Alignment:
Q  11 tagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||||||||||| |||||||   |  ||| |||||||||||||| |||||| || ||||||||||||||||||||||    
T  3439992 tagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 41575147 - 41575236
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggacccc-gcacaagcacacttt 96  Q
    ||||||||| |||||| |||||||||||| ||| |||| ||||||||||| ||||||||  ||| |||||||||  ||||||||||||||    
T  41575147 acatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacacttt 41575236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 26891594 - 26891510
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||| ||||||||||||| ||||||||  |  ||| |||||||||||||||||||||  ||||||||||| || |||||||||    
T  26891594 acatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 2533134 - 2533221
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| ||||| |||| |||||| | ||| ||| |||||||||||||||||| |||  ||| | |||||||||||||||||||||    
T  2533134 acatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 2997569 - 2997489
Alignment:
Q  16 acccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||||| ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2997489  T

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Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 33436221 - 33436309
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||| ||| |||||||||||| ||| ||||| |||||||||||| || | || ||||||   |||||||||||||||    
T  33436221 acatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T

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Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 42257203 - 42257291
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||| |||||| | ||| ||| ||||| |||||||||||| ||   ||| |||||||||||||||||||||||    
T  42257203 acatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacacttt 42257291  T

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Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 43490131 - 43490219
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| |||||||||||||  ||||||||  || ||| |||||||||||||||||||||   ||  ||||||||||||||| |||||||    
T  43490131 acataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

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Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 3737991 - 3738037
Alignment:
Q  46 ccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  3737991 ccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

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Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 13365369 - 13365451
Alignment:
Q  14 acacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||||| ||| |||| |||  || ||| ||||||||||||||||||||| | ||  ||||||||||||||| |||||||    
T  13365369 acacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 13365451  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 17820094 - 17820010
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    ||||||||| |  ||||||| ||||||||  || ||| |||||||||||||||||||||  | ||||||||||| ||||| ||||    
T  17820094 acatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 38732364 - 38732452
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||||||||| |||  |||||| |  || ||| |||||||||||||||||||||  |||  ||||||||||||||| |||||||    
T  38732364 acataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacacttt 38732452  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 36168846 - 36168934
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| |||||| ||  |||||| | ||||||  |||||||||||| ||||| ||   ||| ||||||||||||||||| |||||    
T  36168846 acatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 45097825 - 45097737
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||| ||| |||||||||| |||||| |  || ||| ||| |||||||||||||||||   ||  ||||||||||||||| |||||||    
T  45097825 acataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 45097737  T

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Target: scaffold1268 (Bit Score: 53; Significance: 5e-22; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 1019 - 931
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||| |||||||| ||||||||||||||||||| |||||| ||| ||||||| | ||||||||||||||||||    
T  1019 acatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacacttt 931  T

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Target: scaffold1267 (Bit Score: 53; Significance: 5e-22; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 1019 - 931
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||| | |||||||| |||||||| ||||||||||||||||||| |||||| ||| ||||||| | ||||||||||||||||||    
T  1019 acatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacacttt 931  T

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Target: scaffold0237 (Bit Score: 53; Significance: 5e-22; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 4039 - 4127
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||| ||| | ||||||| |||||| |||||||||||    
T  4039 acatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4127  T

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Target: scaffold0321 (Bit Score: 49; Significance: 1e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 10199 - 10111
Alignment:
Q  8 acatagacacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    ||||||||||| |||||||| |||||| | ||| ||||||||| |||||||||||| ||| ||||||||||| || |||||||||||||    
T  10199 acatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacacttt 10111  T

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Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 17098 - 17148
Alignment:
Q  42 acatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcaca 92  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  17098 acatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 152514 - 152596
Alignment:
Q  14 acacccttaggtggtaatacaccttttaacatccacacaaaaatctgacatgtaatcacgtggaccccgcacaagcacacttt 96  Q
    |||||||| ||||| ||||||||  || ||| |||||||||||||||||||||  |||  |||| |||||||||  |||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacacttt 152596  T

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