View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5892-Insertion-4 (Length: 707)

Name: NF5892-Insertion-4
Description: NF5892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5892-Insertion-4
NF5892-Insertion-4
[»] chr5 (3 HSPs)
chr5 (8-365)||(28532678-28533029)
chr5 (363-481)||(28533069-28533187)
chr5 (151-196)||(41900503-41900548)
[»] chr3 (4 HSPs)
chr3 (371-481)||(51763081-51763191)
chr3 (149-207)||(51763388-51763446)
chr3 (150-207)||(51113195-51113252)
chr3 (89-121)||(51763498-51763530)
[»] chr4 (7 HSPs)
chr4 (149-208)||(553759-553818)
chr4 (149-204)||(21833278-21833333)
chr4 (448-494)||(1537253-1537299)
chr4 (443-494)||(1547375-1547426)
chr4 (402-499)||(53759964-53760058)
chr4 (90-127)||(7225253-7225290)
chr4 (89-129)||(53760907-53760947)
[»] chr6 (12 HSPs)
chr6 (365-439)||(6587982-6588056)
chr6 (149-207)||(6593929-6593987)
chr6 (237-334)||(6588144-6588241)
chr6 (151-207)||(6423907-6423963)
chr6 (153-206)||(6410699-6410752)
chr6 (153-207)||(19633104-19633158)
chr6 (149-206)||(6417092-6417149)
chr6 (150-199)||(6596241-6596290)
chr6 (167-208)||(7132323-7132364)
chr6 (167-208)||(7135246-7135287)
chr6 (167-208)||(7138169-7138210)
chr6 (449-494)||(14810035-14810080)
[»] chr7 (6 HSPs)
chr7 (149-208)||(10615713-10615772)
chr7 (148-208)||(10169047-10169107)
chr7 (89-133)||(10169137-10169181)
chr7 (148-208)||(10176572-10176632)
chr7 (89-133)||(10176662-10176706)
chr7 (446-494)||(15091286-15091334)
[»] chr8 (3 HSPs)
chr8 (150-194)||(32151969-32152013)
chr8 (90-118)||(18314740-18314768)
chr8 (158-206)||(34935986-34936034)
[»] chr1 (2 HSPs)
chr1 (149-213)||(7555198-7555262)
chr1 (151-208)||(19467428-19467485)


Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 8 - 365
Target Start/End: Original strand, 28532678 - 28533029
Alignment:
Q  8 agcctctatcccattgttataactacgagtccgagtctctatcatagagatataatttaaggggtatttaagtatgaggtcgaggtcgagttcttcgagc 107  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||      ||||||    
T  28532678 agcctctaccccattgttataactacgagttcgagtctctatcatagagatataatttaaggggtattttagtctgaggtcgaggtcg------tcgagc 28532771  T
Q  108 aaagggaaacattctgcgataagaaataggttaacaaagccggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28532772 aaagggaaacattctgcgataagaaataggttaacaaagccggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 28532871  T
Q  208 ctgggaagcggttaccaacgtttgggagtttgagtgaagtgaatttgaacgacgagaaacgagagatttggcagagaaggtcgtcgaggttgtgaccgag 307  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||| |||| ||||   ||||||||||||||||||||||||||||||| ||| ||    
T  28532872 ctgggaagcggttaccaacgtttggaagtttgagtgaaatgattttgaatgacgggaaatctgagatttggcagagaaggtcgtcgaggttgttacctag 28532971  T
Q  308 atagcgagagagattgagggaattgagatgggtgaaccttttgaagaggctacgtagg 365  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||    
T  28532972 atagcgagagagatcgaggaaattgagatgggtgaaccttttgaagaggctaagtagg 28533029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 363 - 481
Target Start/End: Original strand, 28533069 - 28533187
Alignment:
Q  363 aggcggccggtgatggagaggaaccgtttggatatggtggagagagaactcaagctgcgacggttgttgttttcgtccataccgtcgttgatgatgaatc 462  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28533069 aggcgtccggtgatggagaggaaccgtttggatacggtggagagagaactcaagttgcgacggttgttgttttcgtccataccgtcgttgatgatgaatc 28533168  T
Q  463 tgaatatacattcccaaca 481  Q
    |||| ||||||||||||||    
T  28533169 tgaagatacattcccaaca 28533187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 41900548 - 41900503
Alignment:
Q  151 aacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcg 196  Q
    ||||||||| |||||||||||||||||| ||||  |||||||||||    
T  41900548 aacaagtgagagaggtcaaagttgtaatctttttggaaaaagctcg 41900503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 51763191 - 51763081
Alignment:
Q  371 ggtgatggagaggaaccgtttggatatggtggagagagaactcaagctgcgacggttgttgttttcgtccataccgtcgttgatgatgaatctgaatata 470  Q
    |||||||||||||||| ||||||| | | ||||||||||| ||||| ||||||||||||| | ||||||   | | | ||||||||||||| |||| |||    
T  51763191 ggtgatggagaggaactgtttggaaacgatggagagagaattcaagttgcgacggttgttttcttcgtcatcatcattgttgatgatgaatttgaagata 51763092  T
Q  471 cattcccaaca 481  Q
     ||||||||||    
T  51763091 gattcccaaca 51763081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 51763446 - 51763388
Alignment:
Q  149 ggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 207  Q
    ||||||||||| ||| |||||||||||||| |||||||||||| ||||||| |||||||    
T  51763446 ggaacaagtgagagatgtcaaagttgtaatcttttgtgaaaaaactcgcaacccatttg 51763388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 51113252 - 51113195
Alignment:
Q  150 gaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 207  Q
    |||||||||| |||||||| ||||||||| ||||  || |||||||||||||||||||    
T  51113252 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttg 51113195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 51763530 - 51763498
Alignment:
Q  89 gaggtcgagttcttcgagcaaagggaaacattc 121  Q
    ||||||||||||||||||||| |||||||||||    
T  51763530 gaggtcgagttcttcgagcaatgggaaacattc 51763498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 553759 - 553818
Alignment:
Q  149 ggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttgc 208  Q
    |||||| |||| |||||||||||||||||||||||| || ||||||||||| ||||||||    
T  553759 ggaacaggtgagagaggtcaaagttgtaatgttttgggagaaagctcgcaacccatttgc 553818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 21833333 - 21833278
Alignment:
Q  149 ggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccat 204  Q
    ||||||||||| |||||||||||| ||||||||||||| |||| ||||||| ||||    
T  21833333 ggaacaagtgagagaggtcaaagtagtaatgttttgtgcaaaaactcgcaacccat 21833278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 494
Target Start/End: Complemental strand, 1537299 - 1537253
Alignment:
Q  448 cgttgatgatgaatctgaatatacattcccaacactcatcaggtaaa 494  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  1537299 cgttgttgaggaatctgaatacacattcccaacactcatcaggtaaa 1537253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 494
Target Start/End: Complemental strand, 1547426 - 1547375
Alignment:
Q  443 accgtcgttgatgatgaatctgaatatacattcccaacactcatcaggtaaa 494  Q
    ||||||| ||||||||||| |||| ||| ||||||||||||| |||||||||    
T  1547426 accgtcgatgatgatgaatttgaagatagattcccaacactcgtcaggtaaa 1547375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 53760058 - 53759964
Alignment:
Q  402 gagagagaactcaagctgcgacggttgttgttttcgtccataccgtcgttgatgatgaatctgaatatacattcccaacactcatcaggtaaacctga 499  Q
    ||||||||| ||||| || ||||||||||||||| |||| |   || |||||||| || | |||| ||| ||||||| ||||||||||||||| ||||    
T  53760058 gagagagaattcaagttgtgacggttgttgtttttgtcctt---gttgttgatgacgagtttgaagatagattcccagcactcatcaggtaaatctga 53759964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 7225290 - 7225253
Alignment:
Q  90 aggtcgagttcttcgagcaaagggaaacattctgcgat 127  Q
    ||||||||||||||||||||||||||||| || |||||    
T  7225290 aggtcgagttcttcgagcaaagggaaacaatccgcgat 7225253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 53760947 - 53760907
Alignment:
Q  89 gaggtcgagttcttcgagcaaagggaaacattctgcgataa 129  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  53760947 gaggtcgagttcttcccgcaaagggaaacattccgcgataa 53760907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 365 - 439
Target Start/End: Complemental strand, 6588056 - 6587982
Alignment:
Q  365 gcggccggtgatggagaggaaccgtttggatatggtggagagagaactcaagctgcgacggttgttgttttcgtc 439  Q
    |||| ||||||||| ||||||| | ||||||| || |||||||||| ||| |||| |||||||||||||||||||    
T  6588056 gcggtcggtgatggcgaggaactgcttggatacggcggagagagaaatcatgctgtgacggttgttgttttcgtc 6587982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 6593987 - 6593929
Alignment:
Q  149 ggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 207  Q
    ||||||| |||||||||||||||||||||| |||||||| ||| ||||||| |||||||    
T  6593987 ggaacaattgaaagaggtcaaagttgtaatcttttgtgagaaaactcgcaaaccatttg 6593929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 334
Target Start/End: Complemental strand, 6588241 - 6588144
Alignment:
Q  237 ttgagtgaagtgaatttgaacgacgagaaacgagagatttggcagagaaggtcgtcgaggttgtgaccgagatagcgagagagattgagggaattgag 334  Q
    ||||||||||||| ||| || |  | |||||||||||||||||| ||||||||||||||||  | ||||  ||| || ||||||||||||||| ||||    
T  6588241 ttgagtgaagtgattttcaatgttgggaaacgagagatttggcaaagaaggtcgtcgaggtcataaccgctatatcgcgagagattgagggaagtgag 6588144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 6423907 - 6423963
Alignment:
Q  151 aacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 207  Q
    ||||||||| ||||||||||||||| |||||||| || ||||||||||| |||||||    
T  6423907 aacaagtgagagaggtcaaagttgttatgttttgggagaaagctcgcaacccatttg 6423963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 6410699 - 6410752
Alignment:
Q  153 caagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccattt 206  Q
    |||||||||||||||||||||||||||||||| || ||| || |||| ||||||    
T  6410699 caagtgaaagaggtcaaagttgtaatgttttgggagaaaacttgcaacccattt 6410752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 19633104 - 19633158
Alignment:
Q  153 caagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 207  Q
    ||||||| ||||||||||||||||||| |||  || ||||||||||| |||||||    
T  19633104 caagtgagagaggtcaaagttgtaatgctttcggagaaagctcgcaacccatttg 19633158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 6417092 - 6417149
Alignment:
Q  149 ggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccattt 206  Q
    ||||||||||| |||||||||||||||| | ||||| || |||||||| || ||||||    
T  6417092 ggaacaagtgagagaggtcaaagttgtattcttttgggagaaagctcgtaacccattt 6417149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 6596290 - 6596241
Alignment:
Q  150 gaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaa 199  Q
    |||||||||| ||||||||||||||| |||||||| || ||| |||||||    
T  6596290 gaacaagtgagagaggtcaaagttgttatgttttgggagaaaactcgcaa 6596241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 7132323 - 7132364
Alignment:
Q  167 caaagttgtaatgttttgtgaaaaagctcgcaatccatttgc 208  Q
    |||||||||||||||||| || ||||||||||| ||||||||    
T  7132323 caaagttgtaatgttttgggagaaagctcgcaacccatttgc 7132364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 7135246 - 7135287
Alignment:
Q  167 caaagttgtaatgttttgtgaaaaagctcgcaatccatttgc 208  Q
    |||||||||||||||||| || ||||||||||| ||||||||    
T  7135246 caaagttgtaatgttttgggagaaagctcgcaacccatttgc 7135287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 7138169 - 7138210
Alignment:
Q  167 caaagttgtaatgttttgtgaaaaagctcgcaatccatttgc 208  Q
    |||||||||||||||||| || ||||||||||| ||||||||    
T  7138169 caaagttgtaatgttttgggagaaagctcgcaacccatttgc 7138210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 14810035 - 14810080
Alignment:
Q  449 gttgatgatgaatctgaatatacattcccaacactcatcaggtaaa 494  Q
    ||||||||||||||| || | || ||||||||||||||||||||||    
T  14810035 gttgatgatgaatctaaagacacgttcccaacactcatcaggtaaa 14810080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000007; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 10615713 - 10615772
Alignment:
Q  149 ggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttgc 208  Q
    ||||||||||| |||||||||||||||||| ||||| || |||||||| || ||||||||    
T  10615713 ggaacaagtgagagaggtcaaagttgtaatcttttgggagaaagctcgtaacccatttgc 10615772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 10169107 - 10169047
Alignment:
Q  148 cggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttgc 208  Q
    |||||||||||| ||||||||||||| |||| ||||| || ||| ||||||| ||||||||    
T  10169107 cggaacaagtgagagaggtcaaagttctaatattttgagagaaaactcgcaacccatttgc 10169047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 10169181 - 10169137
Alignment:
Q  89 gaggtcgagttcttcgagcaaagggaaacattctgcgataagaaa 133  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||    
T  10169181 gaggttgagttcttcaagcaaaggaaaacattctgcgataagaaa 10169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 10176632 - 10176572
Alignment:
Q  148 cggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttgc 208  Q
    |||||||||||| ||||||||||||| |||| ||||| || ||| ||||||| ||||||||    
T  10176632 cggaacaagtgagagaggtcaaagttctaatattttgagagaaaactcgcaacccatttgc 10176572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 10176706 - 10176662
Alignment:
Q  89 gaggtcgagttcttcgagcaaagggaaacattctgcgataagaaa 133  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||    
T  10176706 gaggttgagttcttcaagcaaaggaaaacattctgcgataagaaa 10176662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 446 - 494
Target Start/End: Complemental strand, 15091334 - 15091286
Alignment:
Q  446 gtcgttgatgatgaatctgaatatacattcccaacactcatcaggtaaa 494  Q
    ||||||||||||||||||||| |  ||||||||||||||||| ||||||    
T  15091334 gtcgttgatgatgaatctgaagacgcattcccaacactcatcgggtaaa 15091286  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 32151969 - 32152013
Alignment:
Q  150 gaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagct 194  Q
    |||||||||| |||||||||||||||||||||||| || ||||||    
T  32151969 gaacaagtgagagaggtcaaagttgtaatgttttgggagaaagct 32152013  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 90 - 118
Target Start/End: Complemental strand, 18314768 - 18314740
Alignment:
Q  90 aggtcgagttcttcgagcaaagggaaaca 118  Q
    |||||||||||||||||||||||||||||    
T  18314768 aggtcgagttcttcgagcaaagggaaaca 18314740  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 34936034 - 34935986
Alignment:
Q  158 gaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccattt 206  Q
    |||||| |||||||||||||| |||||||| ||| ||||||| ||||||    
T  34936034 gaaagatgtcaaagttgtaatattttgtgagaaaactcgcaaaccattt 34935986  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 7555198 - 7555262
Alignment:
Q  149 ggaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttgctggga 213  Q
    |||||||||||  ||||| ||||||||||| ||||| || ||||||||||||||| |||| ||||    
T  7555198 ggaacaagtgagtgaggttaaagttgtaatattttgggagaaagctcgcaatccaattgcaggga 7555262  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 19467485 - 19467428
Alignment:
Q  151 aacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttgc 208  Q
    ||||||||| |||||||||||||||||| ||||| |  ||| ||||||| ||||||||    
T  19467485 aacaagtgagagaggtcaaagttgtaatattttgagtgaaaactcgcaacccatttgc 19467428  T

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