View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5892-Insertion-8 (Length: 427)

Name: NF5892-Insertion-8
Description: NF5892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5892-Insertion-8
NF5892-Insertion-8
[»] chr4 (49 HSPs)
chr4 (7-299)||(44007841-44008133)
chr4 (364-427)||(44007713-44007776)
chr4 (129-200)||(30024631-30024702)
chr4 (137-200)||(4071822-4071884)
chr4 (142-198)||(22684586-22684642)
chr4 (136-200)||(29373955-29374019)
chr4 (129-200)||(6364080-6364151)
chr4 (129-192)||(37733930-37733993)
chr4 (129-200)||(54325105-54325176)
chr4 (142-200)||(49219083-49219141)
chr4 (129-187)||(51555948-51556006)
chr4 (163-200)||(13949912-13949949)
chr4 (143-200)||(21952906-21952963)
chr4 (142-190)||(3175895-3175943)
chr4 (129-192)||(4191670-4191734)
chr4 (136-200)||(25487613-25487677)
chr4 (136-200)||(30338660-30338724)
chr4 (146-198)||(41701511-41701563)
chr4 (143-195)||(42321952-42322004)
chr4 (137-192)||(51044534-51044590)
chr4 (130-189)||(4798638-4798697)
chr4 (127-194)||(9680593-9680660)
chr4 (160-199)||(27405763-27405802)
chr4 (137-200)||(44119230-44119293)
chr4 (129-200)||(45128378-45128449)
chr4 (149-200)||(47119033-47119084)
chr4 (145-200)||(51630058-51630113)
chr4 (142-188)||(3155547-3155593)
chr4 (154-200)||(8130130-8130176)
chr4 (144-202)||(17884014-17884072)
chr4 (142-188)||(34368821-34368867)
chr4 (154-200)||(53626732-53626778)
chr4 (136-200)||(8422907-8422969)
chr4 (155-196)||(10192241-10192282)
chr4 (142-199)||(11802479-11802535)
chr4 (143-200)||(18630625-18630682)
chr4 (135-200)||(25885796-25885861)
chr4 (129-190)||(47970249-47970310)
chr4 (154-199)||(54327518-54327563)
chr4 (160-200)||(927438-927478)
chr4 (142-190)||(1404366-1404414)
chr4 (129-189)||(6987820-6987880)
chr4 (136-188)||(7601697-7601749)
chr4 (160-200)||(11917521-11917561)
chr4 (148-200)||(20936070-20936122)
chr4 (148-200)||(24929443-24929495)
chr4 (164-196)||(31038939-31038971)
chr4 (144-196)||(52735068-52735120)
chr4 (137-200)||(55437354-55437415)
[»] chr6 (32 HSPs)
chr6 (136-200)||(29274297-29274361)
chr6 (129-200)||(22742297-22742368)
chr6 (142-200)||(281916-281974)
chr6 (139-199)||(27713448-27713508)
chr6 (129-200)||(24836267-24836338)
chr6 (143-200)||(9093624-9093681)
chr6 (137-198)||(20671935-20671996)
chr6 (128-200)||(4006644-4006716)
chr6 (129-200)||(264302-264373)
chr6 (129-184)||(4248889-4248944)
chr6 (136-199)||(9668054-9668117)
chr6 (138-192)||(2205644-2205698)
chr6 (160-198)||(7713987-7714025)
chr6 (142-200)||(21959672-21959730)
chr6 (155-200)||(7785810-7785855)
chr6 (143-196)||(24782004-24782057)
chr6 (144-200)||(1402942-1402998)
chr6 (129-197)||(10016476-10016544)
chr6 (136-200)||(10452428-10452492)
chr6 (142-198)||(29940740-29940796)
chr6 (129-200)||(11340693-11340764)
chr6 (142-196)||(323755-323809)
chr6 (135-197)||(24476539-24476601)
chr6 (130-188)||(24774690-24774748)
chr6 (142-192)||(31583645-31583695)
chr6 (145-200)||(1810371-1810423)
chr6 (155-200)||(14492259-14492304)
chr6 (161-198)||(27595637-27595674)
chr6 (144-200)||(2027474-2027530)
chr6 (164-200)||(5550098-5550134)
chr6 (168-200)||(20356153-20356185)
chr6 (160-200)||(24838811-24838851)
[»] chr7 (46 HSPs)
chr7 (136-200)||(45813248-45813312)
chr7 (136-196)||(35536045-35536105)
chr7 (129-201)||(42656446-42656518)
chr7 (141-196)||(39591539-39591594)
chr7 (129-200)||(49060471-49060542)
chr7 (142-196)||(5006581-5006635)
chr7 (131-192)||(28178902-28178963)
chr7 (137-197)||(1417203-1417263)
chr7 (160-200)||(23918919-23918959)
chr7 (130-198)||(33894555-33894622)
chr7 (129-192)||(7244633-7244696)
chr7 (144-199)||(22759132-22759187)
chr7 (129-200)||(27548194-27548265)
chr7 (143-198)||(43318598-43318653)
chr7 (137-199)||(2012683-2012745)
chr7 (137-199)||(2030648-2030710)
chr7 (142-200)||(2767246-2767304)
chr7 (136-198)||(27121656-27121718)
chr7 (130-200)||(28165023-28165093)
chr7 (146-196)||(30456522-30456572)
chr7 (131-200)||(9527158-9527227)
chr7 (147-200)||(12835005-12835058)
chr7 (129-194)||(24973875-24973940)
chr7 (147-200)||(40689054-40689107)
chr7 (126-198)||(30133977-30134049)
chr7 (128-200)||(30496634-30496706)
chr7 (160-200)||(38010676-38010716)
chr7 (136-196)||(45593791-45593851)
chr7 (161-197)||(46825061-46825097)
chr7 (129-200)||(3610808-3610879)
chr7 (154-200)||(7453465-7453512)
chr7 (137-200)||(21453233-21453296)
chr7 (129-200)||(39551616-39551687)
chr7 (142-200)||(43152969-43153028)
chr7 (137-199)||(5272889-5272951)
chr7 (160-198)||(47046178-47046216)
chr7 (142-195)||(3802212-3802265)
chr7 (143-200)||(4572543-4572600)
chr7 (129-182)||(8445217-8445270)
chr7 (142-191)||(23214831-23214880)
chr7 (136-201)||(31341132-31341197)
chr7 (137-193)||(2223087-2223143)
chr7 (144-199)||(7100687-7100743)
chr7 (128-200)||(12110290-12110362)
chr7 (160-200)||(30180013-30180053)
chr7 (160-200)||(31002723-31002763)
[»] chr5 (37 HSPs)
chr5 (129-197)||(7674579-7674647)
chr5 (129-197)||(9202819-9202887)
chr5 (129-200)||(29588811-29588881)
chr5 (146-200)||(14295454-14295508)
chr5 (129-198)||(465885-465954)
chr5 (128-200)||(12975277-12975349)
chr5 (129-204)||(912932-913006)
chr5 (139-198)||(11615449-11615508)
chr5 (137-200)||(35135730-35135793)
chr5 (145-200)||(42569048-42569103)
chr5 (129-187)||(35095864-35095922)
chr5 (160-205)||(985595-985640)
chr5 (128-196)||(4855628-4855696)
chr5 (149-201)||(29116997-29117049)
chr5 (136-196)||(37063146-37063206)
chr5 (136-200)||(39128577-39128641)
chr5 (148-191)||(10303751-10303794)
chr5 (144-191)||(10363696-10363743)
chr5 (148-195)||(28586839-28586886)
chr5 (129-200)||(36539677-36539748)
chr5 (129-191)||(6738484-6738546)
chr5 (131-181)||(7096214-7096264)
chr5 (154-200)||(12595808-12595854)
chr5 (129-195)||(20982208-20982274)
chr5 (154-200)||(32969185-32969231)
chr5 (146-200)||(42181160-42181214)
chr5 (163-200)||(583841-583878)
chr5 (142-195)||(12595524-12595577)
chr5 (163-200)||(32059657-32059694)
chr5 (142-199)||(37968835-37968892)
chr5 (137-194)||(38047929-38047986)
chr5 (142-198)||(8158371-8158426)
chr5 (136-200)||(12425509-12425573)
chr5 (131-175)||(13224362-13224406)
chr5 (136-200)||(32172591-32172655)
chr5 (136-200)||(34112813-34112877)
chr5 (160-200)||(40120082-40120122)
[»] chr8 (35 HSPs)
chr8 (129-200)||(42597332-42597403)
chr8 (131-200)||(12361125-12361194)
chr8 (129-200)||(3537099-3537170)
chr8 (136-198)||(37444485-37444547)
chr8 (129-188)||(14482133-14482192)
chr8 (142-200)||(1470924-1470982)
chr8 (142-200)||(11000629-11000687)
chr8 (131-200)||(1112786-1112855)
chr8 (136-201)||(14280468-14280533)
chr8 (155-200)||(42237490-42237535)
chr8 (160-200)||(34770854-34770894)
chr8 (148-200)||(35374441-35374493)
chr8 (137-200)||(4558737-4558800)
chr8 (129-196)||(7026662-7026729)
chr8 (137-196)||(29056063-29056122)
chr8 (137-192)||(31915345-31915400)
chr8 (129-188)||(35534941-35535000)
chr8 (129-192)||(40280281-40280344)
chr8 (141-195)||(6950265-6950319)
chr8 (142-200)||(8908994-8909052)
chr8 (130-196)||(13652147-13652213)
chr8 (130-196)||(13710790-13710856)
chr8 (142-200)||(16210954-16211012)
chr8 (130-200)||(29973013-29973083)
chr8 (163-200)||(787174-787211)
chr8 (143-200)||(2698738-2698795)
chr8 (135-200)||(3936786-3936851)
chr8 (167-200)||(7878554-7878587)
chr8 (129-174)||(10114421-10114466)
chr8 (145-198)||(25867033-25867086)
chr8 (140-200)||(6918247-6918307)
chr8 (130-186)||(8823475-8823531)
chr8 (143-195)||(13561385-13561437)
chr8 (136-176)||(26215434-26215474)
chr8 (160-200)||(45071164-45071204)
[»] chr3 (44 HSPs)
chr3 (137-200)||(38462220-38462283)
chr3 (142-201)||(49586983-49587042)
chr3 (142-200)||(1395615-1395673)
chr3 (145-200)||(36783402-36783457)
chr3 (142-198)||(905040-905096)
chr3 (143-195)||(15304420-15304472)
chr3 (132-192)||(40122828-40122888)
chr3 (142-198)||(42809245-42809301)
chr3 (125-196)||(31403285-31403356)
chr3 (137-200)||(32703077-32703140)
chr3 (129-200)||(41028919-41028990)
chr3 (129-192)||(44374720-44374783)
chr3 (130-200)||(20192674-20192744)
chr3 (143-196)||(10101548-10101601)
chr3 (143-196)||(10212473-10212526)
chr3 (142-199)||(24887352-24887409)
chr3 (139-196)||(36646454-36646511)
chr3 (136-200)||(8007763-8007827)
chr3 (142-198)||(42808923-42808979)
chr3 (137-188)||(2128331-2128382)
chr3 (137-200)||(2865727-2865789)
chr3 (142-200)||(21862243-21862302)
chr3 (129-200)||(32555049-32555120)
chr3 (136-198)||(34638034-34638097)
chr3 (129-200)||(44061091-44061162)
chr3 (129-192)||(44284134-44284197)
chr3 (129-175)||(16790181-16790227)
chr3 (142-196)||(22232770-22232824)
chr3 (142-200)||(42084319-42084377)
chr3 (137-191)||(48364956-48365010)
chr3 (129-198)||(20669110-20669179)
chr3 (163-200)||(23315591-23315628)
chr3 (149-194)||(26990685-26990730)
chr3 (129-198)||(27792803-27792872)
chr3 (143-188)||(30956706-30956751)
chr3 (143-188)||(30972518-30972563)
chr3 (136-196)||(34632129-34632190)
chr3 (143-200)||(37689452-37689509)
chr3 (136-200)||(25129768-25129832)
chr3 (160-196)||(26599140-26599176)
chr3 (136-196)||(31053162-31053222)
chr3 (129-200)||(31075625-31075697)
chr3 (148-200)||(33405235-33405287)
chr3 (140-188)||(46778307-46778355)
[»] chr2 (46 HSPs)
chr2 (136-199)||(17952770-17952833)
chr2 (142-199)||(35459854-35459911)
chr2 (136-192)||(32098384-32098440)
chr2 (129-199)||(28803575-28803645)
chr2 (129-201)||(11393432-11393505)
chr2 (130-199)||(11393724-11393793)
chr2 (129-201)||(11410093-11410166)
chr2 (130-199)||(11410385-11410454)
chr2 (136-196)||(5133710-5133770)
chr2 (160-200)||(11513860-11513900)
chr2 (128-200)||(25609726-25609798)
chr2 (160-204)||(31228881-31228925)
chr2 (142-194)||(40837502-40837554)
chr2 (129-200)||(10143103-10143174)
chr2 (129-200)||(11344352-11344423)
chr2 (137-200)||(31461377-31461440)
chr2 (127-194)||(34054975-34055042)
chr2 (130-200)||(18962106-18962176)
chr2 (141-198)||(656847-656904)
chr2 (131-196)||(33192126-33192191)
chr2 (144-200)||(14209223-14209279)
chr2 (136-196)||(15377703-15377763)
chr2 (160-200)||(22681253-22681293)
chr2 (129-198)||(44600470-44600541)
chr2 (157-200)||(3423836-3423879)
chr2 (129-196)||(3673738-3673805)
chr2 (145-200)||(31740027-31740082)
chr2 (161-200)||(33944568-33944607)
chr2 (129-200)||(42907290-42907361)
chr2 (137-192)||(44606164-44606219)
chr2 (130-200)||(2416245-2416315)
chr2 (129-187)||(33197320-33197378)
chr2 (126-200)||(33942079-33942152)
chr2 (142-188)||(40758967-40759013)
chr2 (142-200)||(41042090-41042148)
chr2 (154-200)||(42592295-42592341)
chr2 (162-199)||(5043629-5043666)
chr2 (155-200)||(6546935-6546980)
chr2 (155-200)||(38997776-38997821)
chr2 (143-188)||(41407246-41407291)
chr2 (136-200)||(1493581-1493645)
chr2 (136-200)||(13866827-13866891)
chr2 (160-200)||(17221608-17221648)
chr2 (160-200)||(29429825-29429865)
chr2 (129-173)||(29628837-29628881)
chr2 (160-196)||(41851975-41852011)
[»] scaffold0349 (1 HSPs)
scaffold0349 (139-199)||(18436-18496)
[»] chr1 (55 HSPs)
chr1 (129-213)||(46499909-46499993)
chr1 (137-200)||(4200168-4200231)
chr1 (129-200)||(37841929-37842000)
chr1 (142-200)||(49517014-49517072)
chr1 (141-194)||(38867907-38867960)
chr1 (135-192)||(50319229-50319286)
chr1 (136-200)||(23544708-23544772)
chr1 (160-200)||(27738248-27738288)
chr1 (128-200)||(45999356-45999428)
chr1 (149-200)||(15360845-15360896)
chr1 (137-196)||(36151577-36151636)
chr1 (137-200)||(44032067-44032130)
chr1 (129-183)||(36641806-36641860)
chr1 (142-200)||(45990126-45990184)
chr1 (131-176)||(4768916-4768961)
chr1 (155-200)||(30371105-30371150)
chr1 (136-197)||(35080141-35080202)
chr1 (155-196)||(46980201-46980242)
chr1 (140-200)||(7218142-7218202)
chr1 (144-192)||(14737781-14737829)
chr1 (129-197)||(17269181-17269249)
chr1 (155-199)||(28467376-28467420)
chr1 (129-200)||(5421988-5422058)
chr1 (129-215)||(14741459-14741546)
chr1 (137-200)||(23895275-23895338)
chr1 (142-200)||(6074418-6074476)
chr1 (160-202)||(10439648-10439690)
chr1 (145-199)||(15687142-15687196)
chr1 (146-215)||(23373345-23373412)
chr1 (130-192)||(26184683-26184745)
chr1 (142-200)||(28689522-28689580)
chr1 (146-200)||(31517808-31517862)
chr1 (154-200)||(34179940-34179986)
chr1 (130-192)||(38651485-38651547)
chr1 (142-196)||(40304126-40304180)
chr1 (129-198)||(870976-871045)
chr1 (167-200)||(25006102-25006135)
chr1 (143-192)||(26293182-26293231)
chr1 (143-200)||(33527215-33527272)
chr1 (142-191)||(40357963-40358012)
chr1 (154-198)||(1879097-1879141)
chr1 (136-200)||(4215310-4215374)
chr1 (128-176)||(4700158-4700206)
chr1 (136-200)||(5941515-5941579)
chr1 (140-188)||(6265036-6265084)
chr1 (129-200)||(7069231-7069303)
chr1 (128-200)||(17420133-17420205)
chr1 (160-200)||(18420922-18420962)
chr1 (148-200)||(26630413-26630465)
chr1 (160-200)||(28788606-28788646)
chr1 (136-200)||(34619446-34619510)
chr1 (160-200)||(47877084-47877124)
chr1 (136-192)||(48748659-48748714)
chr1 (160-200)||(49365827-49365867)
chr1 (144-200)||(52059833-52059889)
[»] scaffold0024 (2 HSPs)
scaffold0024 (130-200)||(27508-27578)
scaffold0024 (129-198)||(21348-21417)
[»] scaffold0590 (1 HSPs)
scaffold0590 (129-197)||(1145-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (129-197)||(2762-2830)
[»] scaffold0549 (2 HSPs)
scaffold0549 (129-200)||(1792-1863)
scaffold0549 (129-200)||(3882-3953)
[»] scaffold0015 (1 HSPs)
scaffold0015 (154-197)||(69014-69057)
[»] scaffold0060 (1 HSPs)
scaffold0060 (129-182)||(63371-63424)


Alignment Details
Target: chr4 (Bit Score: 289; Significance: 1e-162; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 44008133 - 44007841
Alignment:
Q  7 cattatacatatacaaatacaaacaacaatgataatgtaaaaacaagcagctatatatcttaagtcaataaaacaggatcagcgacaataacatcataca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44008133 cattatacatatacaaatacaaacaacaatgataatgtaaaaacaagcagctatatatcttaagtcaataaaacaggatcagcgacaataacatcataca 44008034  T
Q  107 tagaatttaacaacttcacatcataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctatcatgac 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44008033 tagaatttaacaacttcacatcataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctatcatgac 44007934  T
Q  207 gagcttacaaacatgtcataagtcattttaaaaaactccttcaaacagtctcacaagtactaattagattaaatacatcaatccaaacatacc 299  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44007933 gagcttacaaacatgtcataagtcattttaataaactccttcaaacagtctcacaagtactaattagattaaatacatcaatccaaacatacc 44007841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 44007776 - 44007713
Alignment:
Q  364 gtatcttcaaaatgaaacacaaacatgggtactgaaaggtgacctacatttcacatagccgcgt 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44007776 gtatcttcaaaatgaaacacaaacatgggtactgaaaggtgacctacatttcacatagccgcgt 44007713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 30024631 - 30024702
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||  ||||| |||| ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  30024631 ataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctat 30024702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 4071822 - 4071884
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  4071822 ttatatataa-ctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 4071884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 22684642 - 22684586
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||||||||| ||||| |||| | |||||||||| |||||||||||||||||||||    
T  22684642 tataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataagct 22684586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 29374019 - 29373955
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| ||||| || |||||||||||| | |||| ||| ||||||||||||||    
T  29374019 cttatatataagctatttctataacagaagataaaataatgtcaaaatgtattcatataagctat 29373955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 6364080 - 6364151
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||||| ||||||||||| ||||| |||||||||||||||||  ||||| | |||| |||||||||    
T  6364080 ataagcacttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctat 6364151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 37733930 - 37733993
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||||||||||| ||||||||||| ||||| ||| ||||| ||||||| |||||| ||||||||    
T  37733930 ataagtacttatttataagctatttctatagcaagagatacaataaagtcaaattcttttcata 37733993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 54325176 - 54325105
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||| | ||||| ||||| ||||  ||||||||||||||||| |||| ||||||||||||||||||    
T  54325176 ataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctat 54325105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 49219083 - 49219141
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| |||| ||||| ||||| ||||||||||| |||||| ||||||||||||||||    
T  49219083 tataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctat 49219141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 51556006 - 51555948
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttt 187  Q
    |||||| ||||| |||||||||||| |||| ||||||||||||||||| || |||||||    
T  51556006 ataagtgcttatgtataagctattattataacaaaagataaaataaagtcagattgttt 51555948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 13949949 - 13949912
Alignment:
Q  163 aagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||| |||||||||||||||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctat 13949912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 21952906 - 21952963
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||| ||||| ||| |  |||||||||| |||||||||||||||||||||||    
T  21952906 ataagctatttctataacaacaagtaaaataaagtcaaattgttttcatataagctat 21952963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 3175895 - 3175943
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttca 190  Q
    ||||||||| | ||||| ||||||||||||||||| |||||||||||||    
T  3175895 tataagctacttctatagcaaaagataaaataaagtcaaattgttttca 3175943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 4191670 - 4191734
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagat-aaaataaagacaaattgttttcata 192  Q
    |||||| ||||| ||||||||||| ||||| |||||||| ||||||||| |||| ||||||||||    
T  4191670 ataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 25487677 - 25487613
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||| ||||| ||||| ||||||||||| ||  || ||||||||||||||||    
T  25487677 cttatgtataagctatttctataacaaaaaataaaataaagtcacgtttttttcatataagctat 25487613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 30338724 - 30338660
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||||| ||||| ||||||||| |||||||  ||| ||||||||||||||||||    
T  30338724 cttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctat 30338660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 41701563 - 41701511
Alignment:
Q  146 agctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||||  |||| ||||||||||||||||| ||||| |||||||||||||||    
T  41701563 agctatttatataacaaaagataaaataaagtcaaatcgttttcatataagct 41701511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 42322004 - 42321952
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataa 195  Q
    ||||||||||  |||| |||| |||||||||||| ||||||||||||||||||    
T  42322004 ataagctatttttataacaaatgataaaataaagtcaaattgttttcatataa 42321952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 51044590 - 51044534
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaa-ttgttttcata 192  Q
    |||| ||||||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  51044590 ttatgtataagctatttctataacaaaagataaaataaagtcaaacttgttttcata 51044534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 4798697 - 4798638
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttc 189  Q
    ||||| ||||| ||||||||||| ||||| ||||||||||||||||| | || |||||||    
T  4798697 taagtgcttatgtataagctatttctatatcaaaagataaaataaagtctaaatgttttc 4798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 9680593 - 9680660
Alignment:
Q  127 tcataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatata 194  Q
    |||||| | ||||| ||||||||||| | |||  |||||||||||||||| ||||||||| |||||||    
T  9680593 tcataaatgcttatgtataagctatttcgataataaaagataaaataaagtcaaattgttctcatata 9680660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 27405763 - 27405802
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  27405763 caaaagataacataaagacaaattgtttgcatataagcta 27405802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 44119293 - 44119230
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| |||||| |||| ||||| |||||||||||| |||| |||  ||||||||||||||||||    
T  44119293 ttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctat 44119230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 45128449 - 45128378
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||||| ||||| ||||| ||||| ||||||||||||| ||  |||||| || |||||||||||||    
T  45128449 ataagaacttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctat 45128378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 47119084 - 47119033
Alignment:
Q  149 tattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||| |||||||||||| ||||  ||||||||||||||||||||||    
T  47119084 tatttctatatcaaaagataaaacaaagttaaattgttttcatataagctat 47119033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 51630058 - 51630113
Alignment:
Q  145 aagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||  |||| |||||||||||||||||  |||||||||| |||||||||||    
T  51630058 aagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctat 51630113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 3155547 - 3155593
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    ||||||||||| ||||| |||||||||||||||||  ||||||||||    
T  3155547 tataagctatttctatagcaaaagataaaataaagttaaattgtttt 3155593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 8130130 - 8130176
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||||||||| |||||| |||||| ||||||||||||||||    
T  8130130 ctataacaaaagataacataaagtcaaattattttcatataagctat 8130176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 17884014 - 17884072
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcatataagctatca 202  Q
    ||||||||| ||||| |||||||||||||||||  ||||||||||  |||||| |||||    
T  17884014 taagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatca 17884072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 34368821 - 34368867
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    ||||||||||| ||||| |||||||||||| |||| |||||||||||    
T  34368821 tataagctatttctataacaaaagataaaacaaagtcaaattgtttt 34368867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 53626732 - 53626778
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  53626732 ctataacaaaagataaaataaattcaaaatgttttcatataagctat 53626778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 8422969 - 8422907
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||||||||||  ||||  |||||||||||||||| |  ||||||||||||||||||||    
T  8422969 cttatgtataagctatttttataaaaaaagataaaataaagtc--attgttttcatataagctat 8422907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 10192241 - 10192282
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||| ||||||||| ||||||| |||||||||||||||||||    
T  10192241 tataacaaaagatagaataaagtcaaattgttttcatataag 10192282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 11802479 - 11802535
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||||||||| ||||| ||||||||||||||||| |||||| || ||| ||||||||    
T  11802479 tataagctatt-ctataacaaaagataaaataaagtcaaatttttctcacataagcta 11802535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 18630625 - 18630682
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||| | ||| ||||||||||||||||| ||| | |||||||||||||||||    
T  18630625 ataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctat 18630682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 25885796 - 25885861
Alignment:
Q  135 acttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||| |||| || ||||| |||||||||||||||||  ||||||||||| | ||||||||    
T  25885796 acttatgtattagctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctat 25885861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 47970249 - 47970310
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttca 190  Q
    |||||| ||||| ||||||||||| ||||| ||||||||||||| ||| |||| | ||||||    
T  47970249 ataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 54327563 - 54327518
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||| |||||||||||| |||| |||| |||||||||||||||||    
T  54327563 ctataacaaaagataaaacaaagtcaaactgttttcatataagcta 54327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 927438 - 927478
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||| |||||||| |||| ||||||||||||||||||    
T  927438 caaaagatgaaataaagtcaaactgttttcatataagctat 927478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 1404366 - 1404414
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttca 190  Q
    ||||||||||| |||||  |||||||||||||| | |||||||||||||    
T  1404366 tataagctatttctataataaaagataaaataaggtcaaattgttttca 1404414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 6987880 - 6987820
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttc 189  Q
    |||||||||||| ||||| |||||| ||||  ||||||||||| |||| |||| |||||||    
T  6987880 ataagtacttatgtataaactattattatagtaaaagataaaacaaagtcaaactgttttc 6987820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 7601697 - 7601749
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    ||||| ||||||||||| ||||| |||| ||||||||||||  ||||||||||    
T  7601697 cttatgtataagctattcctatagcaaaggataaaataaagttaaattgtttt 7601749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 11917521 - 11917561
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||||| ||||||||||| ||||    
T  11917521 caaaagataaaataaagtcaaattattttcatataacctat 11917561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 20936122 - 20936070
Alignment:
Q  148 ctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||||||||||||||||| |||| | ||||||| ||||||||    
T  20936122 ctatttctataacaaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 24929443 - 24929495
Alignment:
Q  148 ctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||||||||||||||||| | || |||||||||| |||||||    
T  24929443 ctatttctataacaaaagataaaataaagtctaactgttttcataaaagctat 24929495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 31038971 - 31038939
Alignment:
Q  164 agataaaataaagacaaattgttttcatataag 196  Q
    ||||||||||||| |||||||||||||||||||    
T  31038971 agataaaataaagtcaaattgttttcatataag 31038939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 52735068 - 52735120
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||||| || || ||||||||||||||||| ||||||  |||||||||||    
T  52735068 taagctatttctgtaacaaaagataaaataaagtcaaattactttcatataag 52735120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 55437415 - 55437354
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||||||| ||||| ||| |  |||||||||| |||||| ||||||||||||||||    
T  55437415 ttatctataagctatttctataacaata--taaaataaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 29274361 - 29274297
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  29274361 cttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctat 29274297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 22742297 - 22742368
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| |||||||||||  |||| |||| |||||||||||| |||||||||||||||||||||||    
T  22742297 ataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctat 22742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 281974 - 281916
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  281974 tataagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctat 281916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 27713448 - 27713508
Alignment:
Q  139 atatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||||||||||||  |||| ||||||||||||||||| |||||| |||||||||||||||    
T  27713448 atatataagctattgatatatcaaaagataaaataaagtcaaattcttttcatataagcta 27713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 24836338 - 24836267
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| |||| |||||| |||| ||||| ||||||||||||||||| |||||||||||| ||||| ||||    
T  24836338 ataagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactat 24836267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 9093681 - 9093624
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||| ||||| |||||||||||||||||  ||||||||||| ||||||||||    
T  9093681 ataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctat 9093624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 20671996 - 20671935
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||| ||||||||||| ||| | ||||||||||||||||| |||||||||||| ||||||||    
T  20671996 ttatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagct 20671935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 4006644 - 4006716
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| |||||  ||||| |||| ||||| |||| |||||||||||| ||||||||||| |||||||||||    
T  4006644 cataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctat 4006716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 264302 - 264373
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||||||||||||||| ||| | |||||||||||||||||  |||| |||||| | ||||||||    
T  264302 ataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgtctaagctat 264373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 4248889 - 4248944
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattg 184  Q
    |||||| ||||||||||||||||| | ||| ||||||||||||||||| |||||||    
T  4248889 ataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaattg 4248944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 9668117 - 9668054
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||||||||||||||||  |||| |||||||||| ||| || | ||||||||||||||||||||    
T  9668117 cttatatataagctatttgtataacaaaagataacatagagtcgaattgttttcatataagcta 9668054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 2205698 - 2205644
Alignment:
Q  138 tatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||||||||||||| ||| | |||||||||||| |||| |||||||||||||||    
T  2205698 tatatataagctatttctaaaacaaaagataaaacaaagtcaaattgttttcata 2205644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 7713987 - 7714025
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  7713987 caaaagataaaataaagtcaaattgttttcatataagct 7714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 21959672 - 21959730
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| | ||| ||||||||||||||||| ||| |||||| ||||||||||||    
T  21959672 tataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctat 21959730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 7785855 - 7785810
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||    
T  7785855 tataccaaaagataaaataaagtcaaactcttttcatataagctat 7785810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 24782004 - 24782057
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||||||||| ||||| ||||||||||||| ||  |||||||||||||||||||    
T  24782004 ataagctatttctataacaaaagataaaatcaaatcaaattgttttcatataag 24782057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 1402942 - 1402998
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||| ||||| |||||||||||||||||  ||| | ||||||||||||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctat 1402998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 10016476 - 10016544
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    |||||| ||||| ||||||||||| ||| ||||||||||||||||||   ||| |||| ||||||||||    
T  10016476 ataagtccttatgtataagctatttctaaaccaaaagataaaataaatttaaactgttctcatataagc 10016544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 10452492 - 10452428
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||| ||||| ||||| ||||||||||  |||| | ||||||||||||||||    
T  10452492 cttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctat 10452428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 29940740 - 29940796
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||||| || ||||| ||||||||||||||||| ||| |||||||||| ||||||    
T  29940740 tataagctttttctataacaaaagataaaataaagtcaatttgttttcatttaagct 29940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 11340764 - 11340693
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| |||||||||||| || | ||||| |||||||||||||||||  || || |||||||||| |||||    
T  11340764 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctat 11340693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 323755 - 323809
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||||||| |||||  |||||||||||||||  |||| ||||||||||||||    
T  323755 tataagctatttctatattaaaagataaaataaattcaaactgttttcatataag 323809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 24476539 - 24476601
Alignment:
Q  135 acttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    |||||| ||||||||||| ||||| |||||||||||||  ||  ||||| |||||||||||||    
T  24476539 acttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataagc 24476601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 24774690 - 24774748
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    ||||| ||||||||||| ||||| ||||| ||||| ||||||||||| |||| ||||||    
T  24774690 taagtgcttatatataaactatttctataacaaaatataaaataaagtcaaactgtttt 24774748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 31583645 - 31583695
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||||||||| ||||| ||| ||||||||| ||| |||||||||||||||    
T  31583645 tataagctatttctataacaagagataaaatgaagtcaaattgttttcata 31583695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 1810423 - 1810371
Alignment:
Q  145 aagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||| ||||| ||||||||||||||||   | ||||||||||||||||||||    
T  1810423 aagctatttctataacaaaagataaaataaa---atattgttttcatataagctat 1810371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 14492259 - 14492304
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||||||| ||| ||||||||||| ||| |||||||    
T  14492259 tataccaaaagataaaatgaagtcaaattgttttgatacaagctat 14492304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 27595674 - 27595637
Alignment:
Q  161 aaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  27595674 aaaagataaaataaagtcaaattattttcatataagct 27595637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 2027530 - 2027474
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||  |||| ||||||||||||||||| |||| | ||||||||||| ||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctat 2027474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 5550098 - 5550134
Alignment:
Q  164 agataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| |||||| |||||||||||||||||||||||    
T  5550098 agataacataaagtcaaattgttttcatataagctat 5550134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 20356185 - 20356153
Alignment:
Q  168 aaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| |||||||||||||||||||||    
T  20356185 aaaataaagacgaattgttttcatataagctat 20356153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 24838851 - 24838811
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||| |||||| |||| ||||||||||||||||    
T  24838851 caaaagataaaacaaagactaattattttcatataagctat 24838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 45813312 - 45813248
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  45813312 cttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctat 45813248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 35536045 - 35536105
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||||||||||    
T  35536045 cttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataag 35536105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 42656446 - 42656518
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctatc 201  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||  ||||  |||||||||||    
T  42656446 ataagcacttatatataagctatttctataacaaaagataaaataaagtcaaatcatttttgtataagctatc 42656518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 39591594 - 39591539
Alignment:
Q  141 atataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  39591594 atataagttatttctataacaaaagataaaataaagtcaaattgttttcatataag 39591539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 49060471 - 49060542
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| |||| ||||||||||| ||||| ||||| ||||||||||| |||||| |||| |||||||||||    
T  49060471 ataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctat 49060542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 5006635 - 5006581
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||    
T  5006635 tataagctattcctataacaaaagataaaataaagtcaaactgttttcatataag 5006581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 28178902 - 28178963
Alignment:
Q  131 aagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||||| || ||||||||||| ||||| ||||||||||||||||| || ||||||||||||    
T  28178902 aagtactcatgtataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 1417203 - 1417263
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    |||| ||||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagc 1417263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 23918919 - 23918959
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  23918919 caaaagataaaataaagtcaaattgttttcatataagctat 23918959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 33894555 - 33894622
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||| ||||| ||||||||||| ||||| ||||||||||||| ||| |||| ||||||||||||||||    
T  33894555 taagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagct 33894622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 7244633 - 7244696
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||| |||| |||| ||||||||||    
T  7244633 ataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 22759132 - 22759187
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||||||||  |||| |||||||||||||||||  |||||||||||||||||||||    
T  22759132 taagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagcta 22759187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 27548194 - 27548265
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| ||||||||||| |  || ||||||||||||||||| | |||||||||||| ||||||||    
T  27548194 ataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctat 27548265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 43318653 - 43318598
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||||||| ||||| |||| |||||||||||| ||||||||| |||||||||||    
T  43318653 ataagctatttctataacaaatgataaaataaagtcaaattgttatcatataagct 43318598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 2012745 - 2012683
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||| ||||||||||| |||| |||||| || |||||| | ||||||||||||||||||||||    
T  2012745 ttatgtataagctatttctatgccaaaatattaaataatgtcaaattgttttcatataagcta 2012683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 2030648 - 2030710
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||| ||||||||||| |||| |||||| || |||||| | ||||||||||||||||||||||    
T  2030648 ttatgtataagctatttctatgccaaaatattaaataatgtcaaattgttttcatataagcta 2030710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 2767304 - 2767246
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||||| |||||||||||||||| | |||||||||||| |||||||||    
T  2767304 tataatctatttctataacaaaagataaaataaatataaattgttttcacataagctat 2767246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 27121718 - 27121656
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||| |||||| |||| |||||  ||| |||||||||||| |||||||||||||||||||||    
T  27121718 cttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataagct 27121656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 28165023 - 28165093
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| |||||| | || ||||| ||||||||||||| ||| ||||||||||| |||||||||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctat 28165093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 30456572 - 30456522
Alignment:
Q  146 agctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||| ||| | ||||||||||||||||| |||||||||||||||||||    
T  30456572 agctatttctaaaacaaaagataaaataaagtcaaattgttttcatataag 30456522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 9527227 - 9527158
Alignment:
Q  131 aagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| |||||||||| |||||  ||||| ||||||||| ||||||| |||| ||||||||||||| ||||    
T  9527227 aagtgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactat 9527158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 12835058 - 12835005
Alignment:
Q  147 gctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  12835058 gctatttctacaacaaaagataaaataaagtcaaattgttttcatattagctat 12835005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 24973875 - 24973940
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatata 194  Q
    |||||| ||||| || |||||||| ||||| ||||||||||||||||  |||||||||| ||||||    
T  24973875 ataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccatata 24973940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 40689107 - 40689054
Alignment:
Q  147 gctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| |||||||||||||||||  ||||| ||||||||||||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctat 40689054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 30133977 - 30134049
Alignment:
Q  126 atcataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||||||  |||| |||||||||||  || | ||||||||||||||||| ||| |||||||| ||||||||    
T  30133977 atcataagtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagct 30134049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 30496634 - 30496706
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||  |||| ||||| ||||| ||||| ||||| ||||||||||| |||||||||||| ||||| ||||    
T  30496634 cataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctat 30496706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 38010676 - 38010716
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  38010676 caaaagataaaacaaagccaaattgttttcatataagctat 38010716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 45593851 - 45593791
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| ||||||||||| || || ||||| ||||||||||| |||| ||||||||||||||    
T  45593851 cttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataag 45593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 46825061 - 46825097
Alignment:
Q  161 aaaagataaaataaagacaaattgttttcatataagc 197  Q
    |||||||||||||||| ||||||||||||||||||||    
T  46825061 aaaagataaaataaagtcaaattgttttcatataagc 46825097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 3610879 - 3610808
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| ||||||||||| ||| | ||||||||||||| ||| |||| ||||||  ||||||||||    
T  3610879 ataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctat 3610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 7453512 - 7453465
Alignment:
Q  154 ctataccaaaagataaaataaagacaaa-ttgttttcatataagctat 200  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  7453512 ctatagcaaaagataaaataaagtcaaatttgttttcatataagctat 7453465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 21453233 - 21453296
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| |||||||| || || |||||||||| |||||| ||| ||||| |||||||||||||    
T  21453233 ttatatacaagctatttctgtaacaaaagataagataaagtcaagttgttctcatataagctat 21453296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 39551687 - 39551616
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| |||  ||||||||||| ||||| ||||||||| | |||||  ||| ||||||||||||||||||    
T  39551687 ataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctat 39551616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 43153028 - 43152969
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattg-ttttcatataagctat 200  Q
    ||||||||||| ||||| |||||||||||||||||  |||||| |||||||| |||||||    
T  43153028 tataagctatttctataacaaaagataaaataaagttaaattgtttttcatacaagctat 43152969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 5272951 - 5272889
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||| ||||| |||||  |||| ||||||||||||| ||| || |||||||||||||||||||    
T  5272951 ttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataagcta 5272889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 47046216 - 47046178
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  47046216 caaaggataaaataaagtcaaattgttttcatataagct 47046178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 3802265 - 3802212
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataa 195  Q
    ||||||||||| |||||  ||||| |||||||||| ||||| ||||||||||||    
T  3802265 tataagctatttctataataaaaggtaaaataaagtcaaatcgttttcatataa 3802212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 4572543 - 4572600
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||  ||||| ||||||||||||||||| ||| ||| | |||||||||||||    
T  4572543 ataagctatatctataacaaaagataaaataaagtcaatttgatatcatataagctat 4572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 8445217 - 8445270
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaat 182  Q
    |||||| ||| | |||||||||||  |||| |||||||||||||||||||||||    
T  8445217 ataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaat 8445270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 23214831 - 23214880
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcat 191  Q
    ||||||||||| ||||| ||||||||||| ||||| ||||| ||||||||    
T  23214831 tataagctatttctataacaaaagataaactaaaggcaaatagttttcat 23214880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 31341132 - 31341197
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctatc 201  Q
    ||||| |||||||||||  |||| ||||||||||||||||| |||| || ||| ||||||| ||||    
T  31341132 cttatgtataagctatttgtataacaaaagataaaataaagtcaaactggttttatataagttatc 31341197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 2223087 - 2223143
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatat 193  Q
    |||| ||||||||||| ||||| |||||||||||  |||| ||||||||||| ||||    
T  2223087 ttatgtataagctatttctataacaaaagataaagaaaagtcaaattgtttttatat 2223143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 7100743 - 7100687
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaa-ttgttttcatataagcta 199  Q
    |||||||||  |||| |||||||||||| |||| |||| ||||||||||||||||||    
T  7100743 taagctatttttataacaaaagataaaaaaaagtcaaatttgttttcatataagcta 7100687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 12110290 - 12110362
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||||  |||| ||||| ||||  || |||||||||||||| |||||||||||  ||||||||||    
T  12110290 cataagcacttatgaataacctatttctattacacaagataaaataaagtcaaattgttttggtataagctat 12110362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 30180013 - 30180053
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||||||  ||||||||||| ||||||||||    
T  30180013 caaaagataaaataaagttaaattgttttcgtataagctat 30180053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 31002723 - 31002763
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||| | ||||||||||||||||    
T  31002723 caaaagataaaataaagtcaaaatattttcatataagctat 31002763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 7674579 - 7674647
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||   ||||||||||| |||||||    
T  7674579 ataagcacttatatataagctatttctataccaaaagataaaataaatttaaattgttttcttataagc 7674647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 9202887 - 9202819
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    |||||| ||||||||||||||||| || || |||||||||||||||||  |||||||||||||||||||    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagc 9202819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 29588811 - 29588881
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| ||||||||||| ||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  29588811 ataagtgcttatgtataagctatttctataacaaaatataaaataatga-aaattgttttcatataagctat 29588881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 14295454 - 14295508
Alignment:
Q  146 agctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 14295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 465885 - 465954
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||| |||||||||||||||||| ||||  |||||||||||||||||  ||||||||||  ||||||||    
T  465885 ataagcacttatatataagctatttctatgacaaaagataaaataaagttaaattgtttttgtataagct 465954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 12975277 - 12975349
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| |||||||| || ||||| ||||| ||||  ||||||||||  |||||||||||||||||||||||    
T  12975277 cataagtgcttatatacaaactattcctataacaaagaataaaataaaatcaaattgttttcatataagctat 12975349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 913006 - 912932
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctatcatg 204  Q
    ||||||||||||| ||| |||||| ||||||| ||| ||||||||||| |||||||||| | |||||| |||||||    
T  913006 ataagtacttatacata-gctattcctatacctaaaaataaaataaagtcaaattgtttccgtataagttatcatg 912932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 11615449 - 11615508
Alignment:
Q  139 atatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||||||||||||  |||| ||||||||||||||||| |||||||||| | ||||||||    
T  11615449 atatataagctatttttataacaaaagataaaataaagtcaaattgtttacgtataagct 11615508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 35135793 - 35135730
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| |||||| |||| ||||| ||||||||||||||||| |||| | ||||||||||||||||    
T  35135793 ttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctat 35135730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 42569103 - 42569048
Alignment:
Q  145 aagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||| ||||| ||||||||||||||||| | |||||||||| ||||||||||    
T  42569103 aagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagctat 42569048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 35095922 - 35095864
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttt 187  Q
    |||||| ||||||| ||| ||||| ||||| ||||||||||||||||| ||||||||||    
T  35095922 ataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaattgttt 35095864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 985595 - 985640
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctatcatga 205  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||    
T  985595 caaaagataaaataaagtcaaactgttttcacataagctatcatga 985640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 4855628 - 4855696
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||||||||| ||| |||||||  |||| ||||| |||||||||||  |||||||| |||||||||    
T  4855628 cataagtacttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataag 4855696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 29117049 - 29116997
Alignment:
Q  149 tattactataccaaaagataaaataaagacaaattgttttcatataagctatc 201  Q
    |||| ||||| ||||||||||||||||| |||| ||||||| |||||||||||    
T  29117049 tatttctataacaaaagataaaataaagtcaaactgttttcgtataagctatc 29116997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 37063206 - 37063146
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| |||| | ||||||||||||    
T  37063206 cttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataag 37063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 39128577 - 39128641
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||| | ||||| ||||||||||||||||| ||||||||| ||| |||| ||||    
T  39128577 cttatgtataagctaattctataacaaaagataaaataaagtcaaattgttctcaaataaactat 39128641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 10303751 - 10303794
Alignment:
Q  148 ctattactataccaaaagataaaataaagacaaattgttttcat 191  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||    
T  10303751 ctatttctataacaaaagataaaataaagtcaaattgttttcat 10303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 10363696 - 10363743
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcat 191  Q
    ||||||||| ||||| |||||||||||||||||  |||||||||||||    
T  10363696 taagctatttctataacaaaagataaaataaagttaaattgttttcat 10363743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 28586886 - 28586839
Alignment:
Q  148 ctattactataccaaaagataaaataaagacaaattgttttcatataa 195  Q
    ||||| ||||| ||||||||||||||||| |||| |||||||||||||    
T  28586886 ctatttctataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 36539677 - 36539748
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| | |||||||||  | || ||||||||||||||||| |||  ||||||||||||||||||    
T  36539677 ataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctat 36539748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 6738546 - 6738484
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcat 191  Q
    |||||||||||| ||||||||||| | |||  |||||| ||||||||| |||||| |||||||    
T  6738546 ataagtacttatgtataagctatttcaataataaaagacaaaataaagtcaaattcttttcat 6738484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 7096264 - 7096214
Alignment:
Q  131 aagtacttatatataagctattactataccaaaagataaaataaagacaaa 181  Q
    |||| ||||| ||||||||||| ||||| ||||||||||||||||| ||||    
T  7096264 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 7096214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 12595854 - 12595808
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||||||||||||||||  ||||||||||||||||| ||||    
T  12595854 ctataacaaaagataaaataaagttaaattgttttcatataaactat 12595808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 20982274 - 20982208
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataa 195  Q
    |||||| ||||| ||||||||||| ||||| |||| |||||||||||| |||   ||||||||||||    
T  20982274 ataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaacccgttttcatataa 20982208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 32969231 - 32969185
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||||||||| |||||| |||| |||||||||||    
T  32969231 ctataacaaaagataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 42181214 - 42181160
Alignment:
Q  146 agctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||  |||| |||||||||||| |||| ||||| |||||||||||||||||    
T  42181214 agctatttttataacaaaagataaaacaaagtcaaatggttttcatataagctat 42181160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 583878 - 583841
Alignment:
Q  163 aagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctat 583841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 12595577 - 12595524
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataa 195  Q
    ||||||||||| ||||| ||||||||||||||||  ||||| |||||| |||||    
T  12595577 tataagctatttctatagcaaaagataaaataaattcaaatagttttcgtataa 12595524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 32059694 - 32059657
Alignment:
Q  163 aagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctat 32059657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 37968835 - 37968892
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||||||||| ||||| ||||||||||||| | | |||| |||||||||| ||||||    
T  37968835 tataagctatttctataacaaaagataaaatgaggtcaaagtgttttcatagaagcta 37968892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 38047986 - 38047929
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatata 194  Q
    |||| ||||||||||  || || ||||||||||||||||| |||||| ||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatata 38047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 8158426 - 8158371
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||||||||| |||| | ||||||||||||||||  ||||| ||||||||||||||    
T  8158426 tataagctatttctattc-aaaagataaaataaagttaaattattttcatataagct 8158371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 12425509 - 12425573
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| |||||  ||||  ||||||||||||||||  ||||||||||| ||||||||||    
T  12425509 cttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctat 12425573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 13224362 - 13224406
Alignment:
Q  131 aagtacttatatataagctattactataccaaaagataaaataaa 175  Q
    |||| ||||| ||||||||||| ||||| ||||||||||||||||    
T  13224362 aagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 32172591 - 32172655
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||||| ||| | ||||||||||||| ||| ||| |||||| ||||||||||||    
T  32172591 cttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctat 32172655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 34112813 - 34112877
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||| |||||  ||||||| || |||||  || |||||||||||||||||||    
T  34112813 cttatgtataagctatttctatagtaaaagattaattaaagttaagttgttttcatataagctat 34112877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 40120082 - 40120122
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||| ||  |||||||||||||||||||||||    
T  40120082 caaaagataaaatcaaatcaaattgttttcatataagctat 40120122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 42597332 - 42597403
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||  |||||||||||||  |||||||    
T  42597332 ataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctat 42597403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 12361125 - 12361194
Alignment:
Q  131 aagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||| |||||   ||||||||||| ||| |||||||||||||||||||||||    
T  12361125 aagtacttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctat 12361194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 3537170 - 3537099
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||| | ||||||| ||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  3537170 ataagcacttttgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctat 3537099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 37444547 - 37444485
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  ||||||||||| ||||||||    
T  37444547 cttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataagct 37444485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 14482133 - 14482192
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    |||||| ||||| ||||| ||||| ||||| ||||||||||||||||| |||||||||||    
T  14482133 ataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 1470982 - 1470924
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| |||||  |||||||||||||||| ||||||  |||||||||||||||    
T  1470982 tataagctatttctataataaaagataaaataaagtcaaattactttcatataagctat 1470924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 11000687 - 11000629
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| | ||| ||||||||||||||||| ||||||||||||  |||||||||    
T  11000687 tataagctatttccataacaaaagataaaataaagtcaaattgttttcgaataagctat 11000629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 1112786 - 1112855
Alignment:
Q  131 aagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||| |||| |||||| ||||| ||||||||||||||| |  |||||||||||| |||||||||    
T  1112786 aagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctat 1112855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 14280533 - 14280468
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctatc 201  Q
    ||||| ||||| ||||| ||||| ||||||||||||| ||   |||||||||||||||||||||||    
T  14280533 cttatgtataacctatttctatagcaaaagataaaattaaattaaattgttttcatataagctatc 14280468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 42237535 - 42237490
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||    
T  42237535 tataacaaaagataaaataaagttaaattgttttcatataagctat 42237490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 34770854 - 34770894
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  34770854 caaaagataaaataaagtcaaattgttttcatttaagctat 34770894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 35374493 - 35374441
Alignment:
Q  148 ctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| | |||||||||||||||  ||||||||||||||||||||||    
T  35374493 ctatttctatagcgaaagataaaataaagttaaattgttttcatataagctat 35374441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 4558737 - 4558800
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||||||| |||||  ||||||||||||||||  ||||| |||||||||| |||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctat 4558800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 7026662 - 7026729
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||||| |||||  |||||||| |  |||| |||||||||||||||||  ||||||||||||||||||    
T  7026662 ataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataag 7026729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 29056122 - 29056063
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||| ||||||||| | ||| | ||||||||||||||||| ||| |||||||||||||||    
T  29056122 ttatgtataagctacttctagagcaaaagataaaataaagtcaatttgttttcatataag 29056063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 31915400 - 31915345
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||| ||||||||||  ||||| ||||||||| ||||||| |||||||||||||||    
T  31915400 ttatgtataagctatatctataacaaaagatagaataaagtcaaattgttttcata 31915345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 35535000 - 35534941
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    |||||| ||||||||||||||||| |||||  ||||| |||||||||| |||| ||||||    
T  35535000 ataagtgcttatatataagctatttctataataaaagttaaaataaagtcaaactgtttt 35534941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 40280344 - 40280281
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||||| | |||||||||| |||| ||| | |||||||||||||||||  ||||||||||||||    
T  40280344 ataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcata 40280281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 6950265 - 6950319
Alignment:
Q  141 atataagctattactataccaaaagataaaataaagacaaattgttttcatataa 195  Q
    ||||||||| ||  |||| ||||||||||| |||||||||| |||||||||||||    
T  6950265 atataagctgtttttataacaaaagataaagtaaagacaaactgttttcatataa 6950319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 8908994 - 8909052
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||  |||| ||||||||| |||| ||  ||||||||||||||||||||||    
T  8908994 tataagctattgttataacaaaagatataatatagttaaattgttttcatataagctat 8909052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 13652147 - 13652213
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| ||||| ||||||||||| ||||| ||||||||  ||| |||  ||||||||||||||||||    
T  13652147 taagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataag 13652213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 13710790 - 13710856
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| ||||| ||||||||||| ||||| ||||||||  ||| |||  ||||||||||||||||||    
T  13710790 taagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataag 13710856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 16211012 - 16210954
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| |||||  ||| ||||||||||||  | ||||||||||||||||||||    
T  16211012 tataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctat 16210954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 29973013 - 29973083
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||||||||| || || || ||| |||||||||| |||| | |||||| |||||||||    
T  29973013 taagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctat 29973083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 787211 - 787174
Alignment:
Q  163 aagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  787211 aagataaaataaagtcaaattgttatcatataagctat 787174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 2698738 - 2698795
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||| ||||| |||||  |||||||||| | || ||||||||||||||||||    
T  2698738 ataagctatttctatagcaaaaagtaaaataaagtcgaactgttttcatataagctat 2698795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 3936786 - 3936851
Alignment:
Q  135 acttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| ||||| ||||| |||| ||||||||||||  ||||||| ||| ||||||||||    
T  3936786 acttatgtataatctatttctataacaaaggataaaataaagctaaattgtcttcctataagctat 3936851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 7878587 - 7878554
Alignment:
Q  167 taaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||| |||||||||||||||||||||||    
T  7878587 taaaataaagtcaaattgttttcatataagctat 7878554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 10114421 - 10114466
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataa 174  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||||    
T  10114421 ataagtgcttatgtataagctatttctatagcaaaagataaaataa 10114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 25867033 - 25867086
Alignment:
Q  145 aagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||||| ||||| |||||||| |||||||| |||| | ||||||||||||||    
T  25867033 aagctatttctataacaaaagatgaaataaagtcaaaatattttcatataagct 25867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 6918307 - 6918247
Alignment:
Q  140 tatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||  ||||  |||||||||||||||| |||| |||||||  |||||||||    
T  6918307 tatataagctatttatataataaaagataaaataaagtcaaactgttttctaataagctat 6918247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 8823531 - 8823475
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgtt 186  Q
    ||||| ||||||||||||| ||| ||||| |||||||||||| |||| || ||||||    
T  8823531 taagtgcttatatataagccatttctataacaaaagataaaacaaagtcagattgtt 8823475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 13561437 - 13561385
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataa 195  Q
    |||||||||| ||||| || || || |||||||| ||||||||||||||||||    
T  13561437 ataagctatttctataacagaaaattaaataaagtcaaattgttttcatataa 13561385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 26215434 - 26215474
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaag 176  Q
    ||||| ||||||||||| ||||| |||||||||||||||||    
T  26215434 cttatgtataagctatttctataacaaaagataaaataaag 26215474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 45071164 - 45071204
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| ||||||||| ||||||||||| |||||||||||    
T  45071164 caaaagacaaaataaagtcaaattgtttttatataagctat 45071204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 38462220 - 38462283
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||    
T  38462220 ttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctat 38462283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 49587042 - 49586983
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctatc 201  Q
    ||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctatc 49586983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 1395615 - 1395673
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  1395615 tataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 36783457 - 36783402
Alignment:
Q  145 aagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||    
T  36783457 aagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactat 36783402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 905096 - 905040
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||||||||| ||||| ||||||||||||||||| ||| |||||| ||||||||||    
T  905096 tataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataagct 905040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataa 195  Q
    |||||||||| ||||| |||||||||||||||||  |||||||||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 40122888 - 40122828
Alignment:
Q  132 agtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||    
T  40122888 agtacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata 40122828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 42809245 - 42809301
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||||||||| ||||| |||||||||||||| ||  ||||||||||||||||||||    
T  42809245 tataagctatttctataacaaaagataaaatatagttaaattgttttcatataagct 42809301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 31403285 - 31403356
Alignment:
Q  125 catcataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||||| |||||||||||||||||| | ||| ||||||||||||| |||  ||| ||||||| ||||||    
T  31403285 catcataagcacttatatataagctatttccatatcaaaagataaaatgaagttaaaatgttttcgtataag 31403356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 32703077 - 32703140
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||||||| ||||   |||||||||||||||  |||||||||||||||||||||||    
T  32703077 ttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctat 32703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 41028990 - 41028919
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| ||||||||||| ||||| ||||||| ||||||||| |||  |||||||| |||||||||    
T  41028990 ataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataagctat 41028919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 44374783 - 44374720
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||||| ||||| ||||||||||  || || ||||||||||||||||| |||||||||||||||    
T  44374783 ataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 20192744 - 20192674
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| |||||||||||  |||| ||||||||||||||||| ||||  |||||||||||| ||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctat 20192674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 10101601 - 10101548
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| |||| ||||| |||||||||||||||||  ||||||||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataag 10101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 10212526 - 10212473
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| |||| ||||| |||||||||||||||||  ||||||||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataag 10212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 24887409 - 24887352
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||||||||| ||||| ||| ||||||||||||| |||| ||| |||||||||||||    
T  24887409 tataagctatttctataacaatagataaaataaagtcaaactgtattcatataagcta 24887352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 36646511 - 36646454
Alignment:
Q  139 atatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||||||||||||| ||||  |||||||||||||||||   |||||||||||||||||    
T  36646511 atatataagctatttctatgacaaaagataaaataaagtataattgttttcatataag 36646454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 8007827 - 8007763
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||||||| || ||||| ||||||||||| ||||| |||| |||| |||||||||||||    
T  8007827 cttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 8007763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 42808923 - 42808979
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||||| || ||||| |||||||||||||||||  |||||||||| |||||||||    
T  42808923 tataagctgtttctataacaaaagataaaataaagttaaattgtttttatataagct 42808979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 2128382 - 2128331
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    |||| ||||||||||| ||||| |||||||||||||||||  ||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 2865789 - 2865727
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||||| ||||| |||| | ||||| |||| |||||||||||||||||| ||||    
T  2865789 ttatatataagctatttctataacaaa-gttaaaacaaagtcaaattgttttcatataacctat 2865727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 21862302 - 21862243
Alignment:
Q  142 tataagctattactataccaaaagataaaata-aagacaaattgttttcatataagctat 200  Q
    |||||||| || ||||  |||||||||||||| ||| |||||||||||||||||||||||    
T  21862302 tataagctgtttctattacaaaagataaaatacaagtcaaattgttttcatataagctat 21862243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 32555120 - 32555049
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||| || ||||||| |||| || | ||||||||||||||||| |||||| ||||| ||||||||||    
T  32555120 ataagcactcatgtataagcaattattacaacaaaagataaaataaagtcaaattattttcctataagctat 32555049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 34638097 - 34638034
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaa-taaagacaaattgttttcatataagct 198  Q
    ||||||||||||||||| |||||  ||||||||||| |||||  ||||||||||| ||||||||    
T  34638097 cttatatataagctatttctatagaaaaagataaaattaaagttaaattgttttcgtataagct 34638034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 44061162 - 44061091
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||| | ||||||||||| ||||| ||||||||||||||| |  ||||||||||  ||||||||||    
T  44061162 ataagcacttctgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctat 44061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 44284197 - 44284134
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||||||| || ||||||||||| ||||| ||||| |||||| |||| |||| ||||||||||    
T  44284197 ataagtactaatgtataagctatttctataacaaaaaataaaacaaagtcaaactgttttcata 44284134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 16790227 - 16790181
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaa 175  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||||||    
T  16790227 ataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 22232770 - 22232824
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||||||||||  |||| |||| |||||||||||| |||| ||||||||||||||    
T  22232770 tataagctatttatataacaaatgataaaataaagtcaaactgttttcatataag 22232824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 42084377 - 42084319
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| ||||| |||| |||||||||| | ||| ||||||| |||||||||||    
T  42084377 tataagctatttctataacaaaggataaaataatgtcaacttgttttgatataagctat 42084319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 48365010 - 48364956
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcat 191  Q
    |||| |||||| |||| | ||| ||||||||||||||||| ||||||||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 20669110 - 20669179
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||| |||||| ||||||||||| ||||| ||| | ||| ||||||| |||| |||| |||||||||||    
T  20669110 ataagcacttatgtataagctatttctataacaagatatacaataaagtcaaaatgttgtcatataagct 20669179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 23315591 - 23315628
Alignment:
Q  163 aagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctat 23315628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 26990685 - 26990730
Alignment:
Q  149 tattactataccaaaagataaaataaagacaaattgttttcatata 194  Q
    |||| ||||| ||||||||||||||||| |||||| ||||||||||    
T  26990685 tatttctataacaaaagataaaataaagtcaaattcttttcatata 26990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 27792803 - 27792872
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||| ||||| ||||||||||| | | | ||||||||||||||| | |||| | ||||||||||||||    
T  27792803 ataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagct 27792872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 30956751 - 30956706
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    |||||||||| ||||| |||||||||||||||||  ||||||||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgtttt 30956706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 30972563 - 30972518
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    |||||||||| ||||| |||||||||||||||||  ||||||||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgtttt 30972518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 34632190 - 34632129
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaa-taaagacaaattgttttcatataag 196  Q
    ||||||||||||| ||| |||||  ||||||||||| ||||| ||||||||||||| |||||    
T  34632190 cttatatataagcaatttctatagaaaaagataaaattaaagtcaaattgttttcacataag 34632129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 37689509 - 37689452
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||  |||| ||||||||||| |||||  ||||| ||||||||||||||||    
T  37689509 ataagctatttttataacaaaagataaagtaaagttaaattattttcatataagctat 37689452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 25129768 - 25129832
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| |||||  |||| ||||||||||||||| ||||||| |||| || |||||||||| ||||    
T  25129768 cttatgtataacttattcctataccaaaagatacaataaagtcaaactgctttcatataatctat 25129832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 26599140 - 26599176
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  26599140 caaaagataaaataaagtcaaatagttttcatataag 26599176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 31053222 - 31053162
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||||||||||||  ||||| ||||||||||||||||  ||| || ||||| ||||||    
T  31053222 cttatatataagctatatctataacaaaagataaaataaaatcaatttattttcgtataag 31053162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 31075625 - 31075697
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaag-acaaattgttttcatataagctat 200  Q
    ||||||||||||||||||||||||  | || ||||| ||||| ||||| |||||| |||||||| ||| ||||    
T  31075625 ataagtacttatatataagctatttatttaacaaaatataaagtaaagtacaaatcgttttcatgtaaactat 31075697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 33405287 - 33405235
Alignment:
Q  148 ctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| |||||| ||||||||||  || |||||||||||||||||||    
T  33405287 ctatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctat 33405235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 46778355 - 46778307
Alignment:
Q  140 tatataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    ||||||||||||| ||||| ||| |||||||||||||  ||||||||||    
T  46778355 tatataagctatttctatagcaagagataaaataaagttaaattgtttt 46778307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 17952833 - 17952770
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||||||||||||||| ||||| ||||||||||||||||| |||| | |||||||||||||||    
T  17952833 cttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagcta 17952770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 35459854 - 35459911
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||| |||||||||    
T  35459854 tataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataagcta 35459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 32098440 - 32098384
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||||||||||||||| ||||| ||||||||||||||||| |||| ||||||||||    
T  32098440 cttatatataagctatttctataacaaaagataaaataaagtcaaagtgttttcata 32098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 28803645 - 28803575
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||||| |||||||||||| |||| | ||| ||||||||||||||||| |||| || ||||||||||||||    
T  28803645 ataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagcta 28803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 11393505 - 11393432
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaatt-gttttcatataagctatc 201  Q
    |||||| ||||| ||||||||||| ||||| ||||||||| ||||||  |||||| ||||||||||||||||||    
T  11393505 ataagtgcttatctataagctatttctatatcaaaagatataataaattcaaattcgttttcatataagctatc 11393432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 11393793 - 11393724
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||| ||||| ||||||||||| ||||||||||||||| |||||||  |||| || |||||||||||||    
T  11393793 taagtgcttatgtataagctatttctataccaaaagatacaataaagctaaatcgtcttcatataagcta 11393724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 11410166 - 11410093
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaatt-gttttcatataagctatc 201  Q
    |||||| ||||| ||||||||||| ||||| ||||||||| ||||||  |||||| ||||||||||||||||||    
T  11410166 ataagtgcttatctataagctatttctatatcaaaagatataataaattcaaattcgttttcatataagctatc 11410093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 11410454 - 11410385
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||| ||||| ||||||||||| ||||||||||||||| |||||||  |||| || |||||||||||||    
T  11410454 taagtgcttatgtataagctatttctataccaaaagatacaataaagctaaatcgtcttcatataagcta 11410385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 5133710 - 5133770
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| ||||||||||| ||||| |||||||||||||||||| ||| |||||| |||||||    
T  5133710 cttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataag 5133770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 11513860 - 11513900
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  11513860 caaaagataaaataaagtcaaattgttttcatataagctat 11513900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 25609726 - 25609798
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| ||||| ||||||||||| |||||  |||||||||||||||| ||| || ||||| ||||||||||    
T  25609726 cataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctat 25609798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 31228925 - 31228881
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctatcatg 204  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  31228925 caaaagataaaataaaggcaaattgttttcatataagttatcatg 31228881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 40837554 - 40837502
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatata 194  Q
    ||||||||||| ||||| ||||||||||| ||||| |||||||||||||||||    
T  40837554 tataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 10143103 - 10143174
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| |||||| |||| ||||| ||||||||||||| ||| |||| |||||| |||||||||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctat 10143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 11344423 - 11344352
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| |||||  ||||| |||| ||||| |||||||||||| |||| ||||||||||||||| |||||||    
T  11344423 ataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctat 11344352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 31461377 - 31461440
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||| || || | ||||||||    
T  31461377 ttatatataagctatttctataacaaaagataaaataaagtcaaattattctcctgtaagctat 31461440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 34055042 - 34054975
Alignment:
Q  127 tcataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatata 194  Q
    |||||||| ||||| |||| |||||| ||||| ||||||||||||||||| |||| ||||| ||||||    
T  34055042 tcataagtgcttatgtataggctatttctataacaaaagataaaataaaggcaaactgtttacatata 34054975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 18962176 - 18962106
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||| |||||||  |||| |||||||||||||||||  ||| ||||||||||||||||||    
T  18962176 taagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctat 18962106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 656904 - 656847
Alignment:
Q  141 atataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||||||||| ||||| |||||||||||||| |  |||||||||||| ||||||||    
T  656904 atataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagct 656847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 33192126 - 33192191
Alignment:
Q  131 aagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||| |||||||| || ||||| ||||| || |||||||||||||| |||| ||||||||||||||    
T  33192126 aagtgcttatataaaaactatttctataacataagataaaataaagtcaaactgttttcatataag 33192191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 14209223 - 14209279
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||| | ||| ||||||||||||||||  |||| ||||||||||||||||||    
T  14209223 taagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 15377703 - 15377763
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||| ||||||||| | |||||||||| ||||||||||||  | ||||||||||||||||    
T  15377703 cttatttataagctacttctataccaaaggataaaataaagttagattgttttcatataag 15377763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 22681293 - 22681253
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  22681293 caaaagataaaacaaagccaaattgttttcatataagctat 22681253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 44600470 - 44600541
Alignment:
Q  129 ataagtacttatatataagctattactatacc--aaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||| ||||| ||||||||||| ||||| |  ||||||||||||||||  |||| |||||||||||||||    
T  44600470 ataagtgcttatgtataagctatttctatagccaaaaagataaaataaagttaaatagttttcatataagct 44600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 3423879 - 3423836
Alignment:
Q  157 taccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||    
T  3423879 taccaaaagataaaataaagtcaaattattttcatataacctat 3423836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 3673738 - 3673805
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||||| ||||| ||| || |||| ||||| ||||| |||||||||||  ||||||||||||||||||    
T  3673738 ataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataag 3673805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 31740082 - 31740027
Alignment:
Q  145 aagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||| ||||| | ||||||||||||||| |||| | ||||||||||||||||    
T  31740082 aagctatttctataactaaagataaaataaagtcaaactattttcatataagctat 31740027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 33944568 - 33944607
Alignment:
Q  161 aaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  33944568 aaaatataaaataaagtcaaattgttttcatataagctat 33944607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 42907290 - 42907361
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| |||||||||||| ||||| || |||| |||||||||  ||||||||||| | ||||||||    
T  42907290 ataagcacttacatataagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagctat 42907361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 44606219 - 44606164
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||| |||||||||||   ||| ||||||||||||||||||| |||||||||||||    
T  44606219 ttatgtataagctattttcataacaaaagataaaataaagaccaattgttttcata 44606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 2416245 - 2416315
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| |||||| |||| || || ||||||||||||| |||  |||||||||| |||||||||||    
T  2416245 taagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctat 2416315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 33197378 - 33197320
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttt 187  Q
    |||||| ||||| ||||||||||| ||||| ||||||||| ||||||| ||| ||||||    
T  33197378 ataagtgcttatctataagctatttctataacaaaagatagaataaagtcaagttgttt 33197320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 33942079 - 33942152
Alignment:
Q  126 atcataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||| ||| | ||| ||||||| ||| | ||||||||||||||||| |||| ||||||||| ||||||||    
T  33942079 atcataagtgcttttgtatgagctatttcta-atcaaaagataaaataaagtcaaactgttttcatgtaagctat 33942152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 40758967 - 40759013
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    ||||||||||| | ||| ||||||||||||||||| |||||||||||    
T  40758967 tataagctatttccataacaaaagataaaataaagtcaaattgtttt 40759013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 41042148 - 41042090
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| | ||| |||||||||||| ||||| |||||||||  |||||||||||    
T  41042148 tataagctatttcgataacaaaagataaaagaaagataaattgtttatatataagctat 41042090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 42592295 - 42592341
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||||| |||  || |||||||||||||||||||    
T  42592295 ctataccaaaagataaaattaagttaacttgttttcatataagctat 42592341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 5043666 - 5043629
Alignment:
Q  162 aaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagcta 5043629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 6546935 - 6546980
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||    
T  6546935 tataacaaaagataaaataaagtcaaattgtttatatataagctat 6546980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 38997776 - 38997821
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| |||||||||||||||| | ||||||||||| ||||||||||    
T  38997776 tataacaaaagataaaataaatataaattgttttcttataagctat 38997821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 41407246 - 41407291
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    |||||||||| || ||||||||||||||||||||  ||||||||||    
T  41407246 ataagctatttctgtaccaaaagataaaataaagttaaattgtttt 41407291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 1493645 - 1493581
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| || || ||||| ||| ||||||||||||| | | |||||||||||||||||||    
T  1493645 cttatttataaactctttctataacaatagataaaataaagtctagttgttttcatataagctat 1493581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 13866827 - 13866891
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||||| ||||| ||||||||||||| ||| |||| |||||| |||||| ||||    
T  13866827 cttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctat 13866891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 17221648 - 17221608
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| |||||||||| ||||||||| |||||||||||||    
T  17221648 caaaaggtaaaataaagtcaaattgttctcatataagctat 17221608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 29429865 - 29429825
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||| |||||||| |||||||||    
T  29429865 caaaagataaaataaagtcaaactgttttcacataagctat 29429825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 29628881 - 29628837
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaata 173  Q
    ||||||||||||||| ||| |||| ||||| ||||||||||||||    
T  29628881 ataagtacttatataaaagttatttctataacaaaagataaaata 29628837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 41852011 - 41851975
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataag 196  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  41852011 caaaagataaaattaagtcaaattgttttcatataag 41851975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 18496 - 18436
Alignment:
Q  139 atatataagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    ||||||||||||||  |||| ||||||||||||||||| |||||| |||||||||||||||    
T  18496 atatataagctattgatatatcaaaagataaaataaagtcaaattcttttcatataagcta 18436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 46499993 - 46499909
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctatcatgacgagctta 213  Q
    |||||| ||||| ||||||||||| |||||  |||||||||||||||| ||||||||||| || |||||| |||||  |||||||    
T  46499993 ataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaattgtttttatttaagctttcatggagagctta 46499909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 4200168 - 4200231
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| ||||  |||| ||||||||||||||||| ||| |||||||||||||||||||    
T  4200168 ttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctat 4200231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 37841929 - 37842000
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||| || ||||||||||| ||||| |||| ||||||||||||  ||||||||||| ||||||||||    
T  37841929 ataagtactcatgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagctat 37842000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 49517014 - 49517072
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  49517014 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctat 49517072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 38867960 - 38867907
Alignment:
Q  141 atataagctattactataccaaaagataaaataaagacaaattgttttcatata 194  Q
    |||||||||||| |||||||||||||| |||||||| |||| ||||||||||||    
T  38867960 atataagctatttctataccaaaagattaaataaagtcaaaatgttttcatata 38867907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 50319229 - 50319286
Alignment:
Q  135 acttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||||| ||||||||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  50319229 acttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 23544772 - 23544708
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||| ||||   |||||||||||| ||| |||||||||||||||||||||||    
T  23544772 cttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataagctat 23544708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 27738288 - 27738248
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27738288 caaaagataaaataaagtcaaattgttttcatataagctat 27738248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 45999428 - 45999356
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| || || ||||||||||| ||||| |||||||||| |||||| |||| || |||||||||||||||    
T  45999428 cataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctat 45999356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 15360845 - 15360896
Alignment:
Q  149 tattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  15360845 tatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 15360896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 36151636 - 36151577
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||| ||||||||||| | ||| ||||||||||||||||| |||||||||||| ||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataag 36151577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 44032130 - 44032067
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| |||||||  || ||||| |||||| |||||||||| |||||||||||||||||||||||    
T  44032130 ttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctat 44032067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 36641806 - 36641860
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaatt 183  Q
    |||| |||||||||||||| |||| ||||| ||||||||||||||||| ||||||    
T  36641806 ataattacttatatataagttatttctataacaaaagataaaataaagtcaaatt 36641860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 45990184 - 45990126
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||  |||| |||||||||||||||||  ||||||||||||||||||||||    
T  45990184 tatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctat 45990126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 4768961 - 4768916
Alignment:
Q  131 aagtacttatatataagctattactataccaaaagataaaataaag 176  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||    
T  4768961 aagtgcttatgtataagctattgctataccaaaagataaaataaag 4768916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 30371105 - 30371150
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctat 30371150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 35080202 - 35080141
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    ||||||||||||| ||| ||||| ||||| ||||||||||| |||| ||||| |||||||||    
T  35080202 cttatatataagcaatttctataacaaaaaataaaataaagtcaaactgtttccatataagc 35080141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 46980242 - 46980201
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  46980242 tatatcaaaagataaaataaagacaaactgttttcatataag 46980201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 7218202 - 7218142
Alignment:
Q  140 tatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| ||||| | |||  ||||| |||||||||| |||||||||||||||||||||||    
T  7218202 tatataatctatttccataataaaaggtaaaataaagtcaaattgttttcatataagctat 7218142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 14737829 - 14737781
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||| |||| ||||| ||||||||||||||||| |||||||||||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 17269181 - 17269249
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    |||||| ||||| |||||| |||| ||| | ||||||  ||||||||| ||||||||||||||||||||    
T  17269181 ataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagc 17269249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 28467420 - 28467376
Alignment:
Q  155 tataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagcta 28467376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 5422058 - 5421988
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| ||||| ||||||||||| | ||  |||||||||||||| || |||||||||||| ||||||||||    
T  5422058 ataagtgcttat-tataagctatttccatgacaaaagataaaatatagtcaaattgttttcttataagctat 5421988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 14741459 - 14741546
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataa-aataaagacaaattgttttcatataagctatcatgacgagcttaca 215  Q
    |||||| ||||| || |||||||| || || ||||| |||| || |||| |||| ||||||||||||||||||||||  |||||||||    
T  14741459 ataagtgcttatgtacaagctatttctgtaacaaaatataataaaaaaggcaaactgttttcatataagctatcatgtagagcttaca 14741546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 23895275 - 23895338
Alignment:
Q  137 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| ||||||||||| ||||| ||||||||||||||||  |||| |||| ||||||| |||||    
T  23895275 ttatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatatatgctat 23895338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 6074418 - 6074476
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||| ||||| |||||||| | ||||||  ||| ||||||||||||||||||    
T  6074418 tataagctatttctataacaaaagatgatataaagttaaactgttttcatataagctat 6074476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 10439648 - 10439690
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctatca 202  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||    
T  10439648 caaaagataaaatgaagtcaaattattttcatataagctatca 10439690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 15687196 - 15687142
Alignment:
Q  145 aagctattactataccaaaagataaaataaagacaaattgttttcatataagcta 199  Q
    |||||||| ||||| ||||| |||||||||||  ||||||||||| |||||||||    
T  15687196 aagctatttctataacaaaatataaaataaagttaaattgttttcgtataagcta 15687142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 23373412 - 23373345
Alignment:
Q  146 agctattactataccaaaagataaaataaagacaaattgttttcatataagctatcatgacgagcttaca 215  Q
    ||||||| ||||| ||||||||||||||||| |||  |||||||  |||||||||| ||| |||||||||    
T  23373412 agctatttctatatcaaaagataaaataaagtcaatctgttttc--ataagctatcctgaagagcttaca 23373345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 26184683 - 26184745
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||||||||| ||||| ||||| |||||  ||||| |||||||||| |||||| ||||||||    
T  26184683 taagtacttatgtataaactatttctataagaaaaggtaaaataaagtcaaattattttcata 26184745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 28689580 - 28689522
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||||| ||||||||||||||||  ||| | |||||||||||||||||    
T  28689580 tataaactatttctatatcaaaagataaaataaatgcaagtggttttcatataagctat 28689522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 31517862 - 31517808
Alignment:
Q  146 agctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||| ||| | |||||||||||||||||  |||||| |||||||||||||||    
T  31517862 agctatttctacaacaaaagataaaataaagttaaattgatttcatataagctat 31517808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 34179986 - 34179940
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||||||||||||| ||||||||||| || ||||||||    
T  34179986 ctataacaaaagataaaataaagtcaaattgttttaatctaagctat 34179940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 38651547 - 38651485
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||| ||||| ||||||||| | ||||| ||||||||||| ||||| | |||||||||||||    
T  38651547 taagtgcttatgtataagctaattctataacaaaagataaactaaagtcgaattgttttcata 38651485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 40304180 - 40304126
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcatataag 196  Q
    |||||||||||  |||| ||||||||||||||||  || ||||||||||||||||    
T  40304180 tataagctatttatataacaaaagataaaataaaatcacattgttttcatataag 40304126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 870976 - 871045
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    |||||| ||||| ||||| |||||  |||| ||||||||||||| ||| ||| || ||||||||||||||    
T  870976 ataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcatataagct 871045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 25006135 - 25006102
Alignment:
Q  167 taaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||| |||||||||||||||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctat 25006102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 26293231 - 26293182
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    |||||||||| ||||| |||||  |||||||||| |||||||||||||||    
T  26293231 ataagctatttctataacaaaaagtaaaataaagtcaaattgttttcata 26293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 33527272 - 33527215
Alignment:
Q  143 ataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||| ||| | |||||||||||||| || |||| ||||||||||||| ||||    
T  33527272 ataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctat 33527215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 40358012 - 40357963
Alignment:
Q  142 tataagctattactataccaaaagataaaataaagacaaattgttttcat 191  Q
    ||||||||||| ||||| |||  |||||||||||| ||||||||||||||    
T  40358012 tataagctatttctataacaatggataaaataaagtcaaattgttttcat 40357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 1879141 - 1879097
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||| || |||||||||||||| |||| ||||||||||||||||    
T  1879141 ctataacagaagataaaataaagtcaaaatgttttcatataagct 1879097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 4215310 - 4215374
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||| ||||   ||| |||| |||||||||||| |||| ||||||||||||| ||||    
T  4215310 cttatatataagttattttgatagcaaatgataaaataaagtcaaactgttttcatataaactat 4215374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 4700206 - 4700158
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaag 176  Q
    |||||| |||||| || |||||||| ||||| |||||||||||||||||    
T  4700206 cataagcacttatgtacaagctatttctataacaaaagataaaataaag 4700158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 5941579 - 5941515
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||||||   ||| || | |||||||||||| |||| ||||||||||||| ||||    
T  5941579 cttatatataagctattttgataacagatgataaaataaagtcaaactgttttcatataaactat 5941515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 6265036 - 6265084
Alignment:
Q  140 tatataagctattactataccaaaagataaaataaagacaaattgtttt 188  Q
    ||||||||||| | ||||| ||||| ||||||||||| |||||||||||    
T  6265036 tatataagctacttctataacaaaaaataaaataaagtcaaattgtttt 6265084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 7069231 - 7069303
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaaga-caaattgttttcatataagctat 200  Q
    ||||| |||||  ||||||||||||||||| |||||||||||| ||| |   |||||||||| ||||||||||    
T  7069231 ataagcacttaagtataagctattactatagcaaaagataaaaaaaaaattgaattgttttcgtataagctat 7069303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 17420133 - 17420205
Alignment:
Q  128 cataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||| ||||| |||||  ||||  |||||||||||||||| | ||   ||||||||||||||||    
T  17420133 cataagtacttatgtataaactatttttataagaaaagataaaataaagtcgaacaattttcatataagctat 17420205  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 18420962 - 18420922
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||| |||| |||| |||||||||||||    
T  18420962 caaaagataaaataaagtcaaaatgttctcatataagctat 18420922  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 26630413 - 26630465
Alignment:
Q  148 ctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| ||||| || ||||||||  ||||||||||||||||||||||    
T  26630413 ctatttctataacaaaaaatgaaataaagtaaaattgttttcatataagctat 26630465  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 28788646 - 28788606
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  28788646 caaaggataaaataaagtcaaactgttttcatataagctat 28788606  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 34619510 - 34619446
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||||| ||| ||||| ||||||||||||||| |  ||||||||||  ||||||||||    
T  34619510 cttatgtataagccatttctataacaaaagataaaataaggttaaattgtttttgtataagctat 34619446  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 47877084 - 47877124
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||||  |||||||||||||||||| ||||    
T  47877084 caaaagataaaataaaatcaaattgttttcatataaactat 47877124  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 48748714 - 48748659
Alignment:
Q  136 cttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 192  Q
    ||||| ||||||||||| |||||| ||||||| ||||||||  ||||||||||||||    
T  48748714 cttatgtataagctatttctatac-aaaagatgaaataaagttaaattgttttcata 48748659  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 49365867 - 49365827
Alignment:
Q  160 caaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||||||||||| || ||||||||||||||| |||||||    
T  49365867 caaaagataaaatagagtcaaattgttttcatacaagctat 49365827  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 52059833 - 52059889
Alignment:
Q  144 taagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||||||||||||| || ||| |||||||||  |||||||||||||| ||| ||||    
T  52059833 taagctattactataacacaagttaaaataaaatcaaattgttttcatgtaacctat 52059889  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 27508 - 27578
Alignment:
Q  130 taagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    ||||| ||||| |||||| |||| ||||| || |||||||||||||| |||||||||||||||||| ||||    
T  27508 taagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactat 27578  T

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Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 21417 - 21348
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagct 198  Q
    ||||| |||||| |||||||||||  ||||  ||||||||||||||||  ||||||||||| ||||||||    
T  21417 ataagcacttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagct 21348  T

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Target: scaffold0590 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 1213 - 1145
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    |||||| ||||| ||||||||||| ||||| ||||||||||||||||| |||| | || ||||||||||    
T  1213 ataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagc 1145  T

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Target: scaffold0275 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 2762 - 2830
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    |||||| ||||| ||||||||||| ||||| ||||||||||||||||| |||| | || ||||||||||    
T  2762 ataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagc 2830  T

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Target: scaffold0549 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 1863 - 1792
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| |||||||||||| || | ||||| |||||||||||||||||  || || |||||||||| |||||    
T  1863 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctat 1792  T

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Target: scaffold0549; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 3953 - 3882
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 200  Q
    |||||| |||||||||||| || | ||||| |||||||||||||||||  || || |||||||||| |||||    
T  3953 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctat 3882  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 69057 - 69014
Alignment:
Q  154 ctataccaaaagataaaataaagacaaattgttttcatataagc 197  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||    
T  69057 ctataccaaaatataaaataaagtcaaattattttcatataagc 69014  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 63424 - 63371
Alignment:
Q  129 ataagtacttatatataagctattactataccaaaagataaaataaagacaaat 182  Q
    |||||| ||| | |||||||||||  |||| |||||||||||||||||||||||    
T  63424 ataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaat 63371  T

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