View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5892-Insertion-9 (Length: 396)
Name: NF5892-Insertion-9
Description: NF5892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5892-Insertion-9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 9 - 396
Target Start/End: Original strand, 7046581 - 7046968
Alignment:
| Q |
9 |
gaaataacataatgcaatcttattgtatagttctattacctaaaattgcaaggaatctccattcaacaaaaagtcctagcagataagccagcataattcc |
108 |
Q |
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| T |
7046581 |
gaaataacataatgcaatcttattgtatagttctattacctaaaattgcaaggaatctccattcaacaaaaagtcctagcagataagccagcataattcc |
7046680 |
T |
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| Q |
109 |
aagtgtgacagaaagctatgcagaaaacaaaaatttaaaataaagctcactaatctaggaagtgataatttattcaaatgtagcaccaaaatagaaattt |
208 |
Q |
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| T |
7046681 |
aagggtgacagaaagctatgcagaaaacaaaaattttaaataaagctcactaatctaggaagtgataatttattcaaatgtagcaccaaaatagaaattt |
7046780 |
T |
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| Q |
209 |
aactctaattgatggtatttaccaacctggttaactgaaaccagacttcccctcaagttttgaggtgatatctcagctatatacactggcacctgtatga |
308 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7046781 |
aactctaattgatggtatttaccaacctggttaaccgaaaccagacttcccctcaagttttgaggtgatatctcagctatatacactggcacctgtatga |
7046880 |
T |
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| Q |
309 |
attaattcgaaaactcaattattgtcttctcatataaattgatcacacactagcaaaagtgaaaacgattggaaattaccgtgtaaga |
396 |
Q |
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| T |
7046881 |
attaattcgaaaactcaattattgtctactcatataaattgatcacacactagcaaaagtgaaaacgattggaaattaccgtgtaaga |
7046968 |
T |
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